TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1805363.2.1
(2856 letters)
Database: Avena_nucl_with_EST.fasta
8143 sequences; 4,702,463 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN819884.1|CN819884 HRO4407_C09_F17ZS5 Lib AA069E1X Aven... 172 2e-043
gb|CN815813.1|CN815813 HRO4510_G06_M12ZS5 Lib AA071E1X Aven... 168 3e-042
gb|CN819594.1|CN819594 HRO4401_H12_O23ZS5 Lib AA069E1X Aven... 145 4e-035
gb|CN815647.1|CN815647 HRO4514_A01_A02ZS5 Lib AA071E1X Aven... 99 3e-021
gb|BE439369.1|BE439369 CDO1430_WHE05G09R ITEC CDO Oat cDNA ... 45 1e-010
gb|CN817357.1|CN817357 HRO4465_C10_F19ZS5 Lib AA070E1X Aven... 52 5e-007
gb|CN817400.1|CN817400 HRO4465_F03_L05ZS5 Lib AA070E1X Aven... 36 0.025
gb|CN817662.1|CN817662 HRO4463_A01_A01ZS5 Lib AA070E1X Aven... 36 0.025
gb|CN820539.1|CN820539 HRO4413_E08_I15ZS5 Lib AA069E1X Aven... 32 0.43
gb|CN816636.1|CN816636 HRO4523_A12_B23ZS5 Lib AA071E1X Aven... 31 0.81
gb|CN821188.1|CN821188 HRO4428_E03_J06ZS5 Lib AA069E1X Aven... 31 0.81
emb|X76737.1|AS12SGL1 A.sativa (L) mRNA for 12S globulin (1... 31 1.1
gb|CN821132.1|CN821132 HRO4427_H03_P05ZS5 Lib AA069E1X Aven... 27 1.7
gb|CN819092.1|CN819092 HRO4468_H07_O14ZS5 Lib AA070E1X Aven... 30 2.1
gb|CN819714.1|CN819714 HRO4403_C07_F13ZS5 Lib AA069E1X Aven... 30 2.1
gb|CN820157.1|CN820157 HRO4411_G11_N21ZS5 Lib AA069E1X Aven... 30 2.1
gb|CN821300.1|CN821300 HRO4423_G07_N13ZS5 Lib AA069E1X Aven... 28 2.3
gb|CN818420.1|CN818420 HRO4469_B07_D13ZS5 Lib AA070E1X Aven... 27 2.5
gb|CN815875.1|CN815875 HRO4511_D12_H23ZS5 Lib AA071E1X Aven... 29 2.9
gb|CN821169.1|CN821169 HRO4428_C06_F12ZS5 Lib AA069E1X Aven... 29 2.9
gb|CN821539.1|CN821539 HRO4426_D12_G24ZS5 Lib AA069E1X Aven... 29 4.0
gb|BE439177.1|BE439177 CDO772_WHE03C11F ITEC CDO Oat cDNA L... 29 5.5
gb|CN820653.1|CN820653 HRO4415_H04_P07ZS5 Lib AA069E1X Aven... 29 5.5
gb|CN821308.1|CN821308 HRO4423_H03_P05ZS5 Lib AA069E1X Aven... 29 5.5
emb|AJ295998.1|AST295998 Avena strigosa partial resistance ... 29 5.5
emb|AJ780937.1| Avena wiestii partial rga gene for putative... 29 5.5
emb|AJ780948.1| Avena sativa partial rga gene for putative ... 29 5.5
gb|AY566266.1| Avena sativa lipase 1 mRNA, complete cds 29 5.5
gb|CK780240.1|CK780240 umn41 UMN cDNA from oat Avena sativa... 28 7.5
gb|CN814648.1|CN814648 HRO4501_A03_A05ZS5 Lib AA071E1X Aven... 28 7.5
gb|CN815018.1|CN815018 HRO4505_A01_A01ZS5 Lib AA071E1X Aven... 28 7.5
gb|CN815299.1|CN815299 HRO4508_B07_D14ZS5 Lib AA071E1X Aven... 28 7.5
gb|CN816820.1|CN816820 HRO4525_B10_C19ZS5 Lib AA071E1X Aven... 28 7.5
gb|CN818411.1|CN818411 HRO4469_C04_F07ZS5 Lib AA070E1X Aven... 28 7.5
gb|CN819266.1|CN819266 HRO4452_A04_A08ZS5 Lib AA070E1X Aven... 28 7.5
gb|CN819308.1|CN819308 HRO4452_E01_I02ZS5 Lib AA070E1X Aven... 28 7.5
gb|CN820033.1|CN820033 HRO4410_D03_G06ZS5 Lib AA069E1X Aven... 28 7.5
gb|CN820620.1|CN820620 HRO4415_E06_J11ZS5 Lib AA069E1X Aven... 28 7.5
gb|CN820713.1|CN820713 HRO4416_G01_N02ZS5 Lib AA069E1X Aven... 28 7.5
gb|CN820796.1|CN820796 HRO4420_A02_B04ZS5 Lib AA069E1X Aven... 28 7.5
gb|CN821631.1|CN821631 HRO4408_E02_J04ZS5 Lib AA069E1X Aven... 28 7.5
emb|AJ780947.1| Avena insularis partial rga gene for putati... 28 7.5
>gb|CN819884.1|CN819884 HRO4407_C09_F17ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4407_C09_F17, mRNA
sequence
Length = 676
Score = 172 bits (371), Expect = 2e-043
Identities = 66/76 (86%), Positives = 73/76 (96%)
Frame = -2 / +1
Query: 659 NLVGIVAGVSYAINSGYQSWGPLFGKLFFAIWVILHLYPFLKGLMGKQNRTPTIVIVWSV 480
N+VG+VAG SYAINSGYQSWGPLFGKLFFA WVI+HLYPFLKGLMG+ NRTPTIVIVW++
Sbjct: 49 NMVGVVAGTSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRTNRTPTIVIVWAI 228
Query: 479 LLASIFSLLWVKIDPF 432
LLASIFSLLWV+IDPF
Sbjct: 229 LLASIFSLLWVRIDPF 276
Score = 132 bits (282), Expect = 4e-031
Identities = 57/89 (64%), Positives = 66/89 (74%)
Frame = +1 / -3
Query: 430 MKGSIFTHSSENMEARRTDQTMTMVGVRFCFPMRPFRKG*RWRITQIAKNSFPNSGPHDW 609
+ GSI THS E +EARR QTMT+VGVRF P+RP R G + ITQ AK SFPNSGPHDW
Sbjct: 278 VNGSIRTHSKEKIEARRIAQTMTIVGVRFVLPIRPLRNGYK*TITQKAKKSFPNSGPHDW 99
Query: 610 *PLLIAYDTPATIPTRLITSTVVGGIRRV 696
*PLL+A + PAT PT L+ VVGG+R V
Sbjct: 98 *PLLMA*EVPATTPTMLMIKIVVGGMRSV 12
Score = 95.5 bits (202), Expect = 4e-020
Identities = 36/72 (50%), Positives = 50/72 (69%)
Frame = -1 / +3
Query: 639 WSVVCYQQWLPIMGSTIREAVLCNLGDPPPLPFPEGSHGEAEPHTDHRHCLVRPSCFHIL 460
W ++C+QQWLPIMG+ +R+A+LC LGD +P P+GS+G+ +PHTD H L P F +L
Sbjct: 69 WHLLCHQQWLPIMGAAVRKALLCLLGDCSLIPIPQGSYGQDKPHTDDCHRLGYPPRFDLL 248
Query: 459 AAVGEDRPLHIP 424
AVG +H P
Sbjct: 249 LAVGSY*SIHYP 284
Score = 84.9 bits (179), Expect = 6e-017
Identities = 40/89 (44%), Positives = 59/89 (66%)
Frame = +3 / -2
Query: 426 GYEGVDLHPQQREYGSKKDGPNNDDGRCAVLLPHETLQERVEVEDHPDCKEQLPE*WTP* 605
G E ++ +PQQ E S++D P++D+ RCAV H+TL+E V V +HP+ KE+L E P*
Sbjct: 282 GSEWINTNPQQGEDRSEEDSPDDDNRRCAVCPAHKTLEEWV*VNNHPEGKEELSEQRPP* 103
Query: 606 LVATVDSIRHSSHYTNQVNHKHSGGGDQK 692
LV TVD I +S+ T+ VN ++ D+K
Sbjct: 102 LVTTVDGIGGASNNTDHVNDQNCCWRDEK 16
Score = 35.0 bits (70), Expect(2) = 0.001
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2 / -1
Query: 566 RLQRTASRIVDPMIGSHC**HTTLQPLYQP 655
R QR A R PMIG+HC* H Q ++P
Sbjct: 142 RRQRRAFRTAAPMIGNHC*WHRRCQQQHRP 53
Score = 33.1 bits (66), Expect = 0.23
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = -3 / +2
Query: 535 RVSWGSRTAHRPSSLFGPSFLLPYSRCCG 449
RV W +TAHR S G S L S CCG
Sbjct: 173 RVLWAGQTAHRRLSSSGLSSSLRSSPCCG 259
Score = 23.1 bits (44), Expect(2) = 0.001
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2 / -1
Query: 449 PTAARIWKQEGRTKQ*RWSVCG 514
PTA R K+ G ++*+ SVCG
Sbjct: 259 PTARRRSKRGG*PRR*QSSVCG 194
>gb|CN815813.1|CN815813 HRO4510_G06_M12ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4510_G06_M12, mRNA sequence
Length = 521
Score = 168 bits (362), Expect = 3e-042
Identities = 66/96 (68%), Positives = 80/96 (83%)
Frame = -2 / +2
Query: 704 KWXXXXXXXXXXXXINLVGIVAGVSYAINSGYQSWGPLFGKLFFAIWVILHLYPFLKGLM 525
+W IN+VGIVAGVS A+N+GY SWGPLFGKLFF+ WVI+HLYPFLKGLM
Sbjct: 11 QWTTLLIPPTTLIIINMVGIVAGVSDAVNNGYGSWGPLFGKLFFSFWVIVHLYPFLKGLM 190
Query: 524 GKQNRTPTIVIVWSVLLASIFSLLWVKIDPFISPTQ 417
G+QNRTPTIV++WSVLLASIFSL+WV+IDPFI+ ++
Sbjct: 191 GRQNRTPTIVVLWSVLLASIFSLVWVRIDPFIAKSK 298
Score = 144 bits (308), Expect = 9e-035
Identities = 61/91 (67%), Positives = 68/91 (74%)
Frame = +1 / -3
Query: 430 MKGSIFTHSSENMEARRTDQTMTMVGVRFCFPMRPFRKG*RWRITQIAKNSFPNSGPHDW 609
MKGSI T + E MEA RTDQ+ TMVGVRFC PM P R G*RW +TQ K SFP GPHD
Sbjct: 285 MKGSILTQTREKMEASRTDQSTTMVGVRFCLPMSPLRNG*RWTMTQKEKKSFPKRGPHDP 106
Query: 610 *PLLIAYDTPATIPTRLITSTVVGGIRRVVH 702
*PLL A +TPAT+PT L+ +VVGGI RVVH
Sbjct: 105 *PLLTASETPATMPTMLMMMSVVGGISRVVH 13
Score = 98.7 bits (209), Expect = 4e-021
Identities = 41/91 (45%), Positives = 56/91 (61%)
Frame = -1 / +1
Query: 702 VDNSSDPPHHCACD*PGWYSGWSVVCYQQWLPIMGSTIREAVLCNLGDPPPLPFPEGSHG 523
VD+ +DP ++ G + W QQWL +MG +REA+L LG PPLP P+G+HG
Sbjct: 13 VDHPTDPTNYTHHHQHGRHCCWCFRRSQQWLRVMGPPLREALLFLLGHRPPLPIPQGAHG 192
Query: 522 EAEPHTDHRHCLVRPSCFHILAAVGEDRPLH 430
EA+PH HR LV P+ H+L +G+D LH
Sbjct: 193 EAKPHAHHRRALVCPARLHLLPRLGQD*SLH 285
Score = 90.0 bits (190), Expect = 2e-018
Identities = 43/97 (44%), Positives = 60/97 (61%)
Frame = +3 / -2
Query: 417 LGRGYEGVDLHPQQREYGSKKDGPNNDDGRCAVLLPHETLQERVEVEDHPDCKEQLPE*W 596
LG G EG++ P + E G ++D P +DDG AVL PHE L+E VEV+D P+ KE+LPE
Sbjct: 298 LGLGDEGINPDPDEGEDGGEQDRPEHDDGGRAVLPPHEPLEEWVEVDDDPEGKEELPEEG 119
Query: 597 TP*LVATVDSIRHSSHYTNQVNHKHSGGGDQKSCPLE 707
P* VA VD + ++S+ + V+ DQ PL+
Sbjct: 118 AP*PVAIVDCVGNTSNNADHVDDDECSWWDQ*GGPLK 8
Score = 46.4 bits (95), Expect = 2e-005
Identities = 25/69 (36%), Positives = 27/69 (39%)
Frame = -3 / +3
Query: 622 STVATNHGVHYXXXXXXXXXXXXXXXXX*RVSWGSRTAHRPSSLFGPSFLLPYSRCCG*R 443
ST+AT HG R SWG +TA PSS G S P S G
Sbjct: 93 STMATGHGAPSSGSSSFPSGSSSTSTHSSRGSWGGKTARPPSSCSGLSCSPPSSPSSGSG 272
Query: 442 STPSYPLPR 416
PS P PR
Sbjct: 273 LIPSSPSPR 299
Score = 29.9 bits (59), Expect(2) = 0.029
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2 / -1
Query: 449 PTAARIWKQEGRTKQ*RWSVCGSA 520
P R W++ G+T+ RW CG A
Sbjct: 266 PRRGRRWRRAGQTRARRWWACGFA 195
Score = 23.5 bits (45), Expect(2) = 0.029
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +2 / -1
Query: 566 RLQRTASRIVDPMIGSHC* 622
R +R ASR PM SHC*
Sbjct: 149 RRKRRASRRGGPMTRSHC* 93
>gb|CN819594.1|CN819594 HRO4401_H12_O23ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4401_H12_O23, mRNA
sequence
Length = 620
Score = 145 bits (311), Expect = 4e-035
Identities = 55/62 (88%), Positives = 60/62 (96%)
Frame = -2 / +2
Query: 617 SGYQSWGPLFGKLFFAIWVILHLYPFLKGLMGKQNRTPTIVIVWSVLLASIFSLLWVKID 438
SGYQSWGPLFGKLFFA WVI+HLYPFLKGLMG+ NRTPTIVIVW++LLASIFSLLWV+ID
Sbjct: 2 SGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRTNRTPTIVIVWAILLASIFSLLWVRID 181
Query: 437 PF 432
PF
Sbjct: 182 PF 187
Score = 99.6 bits (211), Expect = 2e-021
Identities = 42/63 (66%), Positives = 47/63 (74%)
Frame = +1 / -3
Query: 430 MKGSIFTHSSENMEARRTDQTMTMVGVRFCFPMRPFRKG*RWRITQIAKNSFPNSGPHDW 609
+ GSI THS E +EARR QTMT+VGVRF P+RP R G + ITQ AK SFP SGPHDW
Sbjct: 189 VNGSIRTHSKEKIEARRIAQTMTIVGVRFVLPIRPLRNGYK*TITQKAKKSFPKSGPHDW 10
Query: 610 *PL 618
*PL
Sbjct: 9 *PL 1
Score = 89.5 bits (189), Expect = 2e-018
Identities = 35/65 (53%), Positives = 46/65 (70%)
Frame = -1 / +1
Query: 618 QWLPIMGSTIREAVLCNLGDPPPLPFPEGSHGEAEPHTDHRHCLVRPSCFHILAAVGEDR 439
QWLPIMG+ +R+A+LC LGD +P P+GS+G+ +PHTD RH L P F +L AVG R
Sbjct: 1 QWLPIMGAALRKALLCLLGDCSLIPVPQGSYGQDKPHTDDRHRLGYPPRFDLLLAVGSYR 180
Query: 438 PLHIP 424
+H P
Sbjct: 181 SIHYP 195
Score = 76.7 bits (161), Expect = 2e-014
Identities = 34/64 (53%), Positives = 45/64 (70%)
Frame = +3 / -2
Query: 426 GYEGVDLHPQQREYGSKKDGPNNDDGRCAVLLPHETLQERVEVEDHPDCKEQLPE*WTP* 605
G E +D +PQQ E S++D P++DD RCAV H+TL+ERV V +HP+ KE+L E P*
Sbjct: 193 GSEWIDTNPQQGEDRSEEDSPDDDDRRCAVCPAHKTLEERV*VNNHPEGKEELSEERPP* 14
Query: 606 LVAT 617
LV T
Sbjct: 13 LVTT 2
Score = 37.7 bits (76), Expect = 0.010
Identities = 19/37 (51%), Positives = 20/37 (54%)
Frame = -3 / +3
Query: 535 RVSWGSRTAHRPSSLFGPSFLLPYSRCCG*RSTPSYP 425
RV W +TAHR SS G S L S CCG S S P
Sbjct: 84 RVLWAGQTAHRRSSSSGLSSSLRSSPCCGFVSIHSLP 194
Score = 24.9 bits (48), Expect(2) = 0.75
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2 / -1
Query: 449 PTAARIWKQEGRTKQ*RWSVCG 514
PTA R K+ G ++*R SVCG
Sbjct: 170 PTARRRSKRGG*PRR*RSSVCG 105
Score = 23.5 bits (45), Expect(2) = 0.75
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +2 / -1
Query: 566 RLQRTASRIVDPMIGSH 616
R QR A R PMIG+H
Sbjct: 53 RRQRRAFRRAAPMIGNH 3
>gb|CN815647.1|CN815647 HRO4514_A01_A02ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4514_A01_A02, mRNA sequence
Length = 474
Score = 99.1 bits (210), Expect = 3e-021
Identities = 37/48 (77%), Positives = 46/48 (95%)
Frame = -2 / +3
Query: 563 VILHLYPFLKGLMGKQNRTPTIVIVWSVLLASIFSLLWVKIDPFISPT 420
VI+HLYPFLKGL+G+QNRTPTIVIVWS+LLASI SLLWV+++PF++ T
Sbjct: 12 VIVHLYPFLKGLLGRQNRTPTIVIVWSILLASIISLLWVRVNPFLAKT 155
Score = 70.3 bits (147), Expect = 2e-012
Identities = 30/44 (68%), Positives = 31/44 (70%)
Frame = +1 / -3
Query: 433 KGSIFTHSSENMEARRTDQTMTMVGVRFCFPMRPFRKG*RWRIT 564
KG T SE MEARR DQTMT+VGV FC P RP R G*RW IT
Sbjct: 142 KGLTRTQRSEMMEARRIDQTMTIVGVLFCLPSRPLRNG*RWTIT 11
Score = 55.6 bits (115), Expect = 4e-008
Identities = 22/46 (47%), Positives = 34/46 (73%)
Frame = +3 / -2
Query: 426 GYEGVDLHPQQREYGSKKDGPNNDDGRCAVLLPHETLQERVEVEDH 563
G EGVD HP++R+ G ++D P++DD R VL +TL+E VE+++H
Sbjct: 149 GKEGVDAHPKERDDGGQED*PDDDDRRGPVLPSKQTLEEWVEMDNH 12
>gb|BE439369.1|BE439369 CDO1430_WHE05G09R ITEC CDO Oat cDNA Library Avena sativa cDNA clone
CDO1430_WHE05G09, mRNA sequence
Length = 177
Score = 45.1 bits (92), Expect(3) = 1e-010
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = -1 / +2
Query: 1773 GLDGIQGPVYVGTGCCFNRQA 1711
GLDGIQGPVYVGTG CF + +
Sbjct: 5 GLDGIQGPVYVGTGLCFQQNS 67
Score = 38.2 bits (77), Expect = 0.007
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +2 / -1
Query: 1724 KQHPVPT*TGP*MPSRP 1774
K +PVPT*TGP*MPSRP
Sbjct: 54 KHNPVPT*TGP*MPSRP 4
Score = 29.9 bits (59), Expect = 2.1
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / -2
Query: 1725 NSILFPHKQVLECH 1766
N+I FPHK LECH
Sbjct: 53 NTIQFPHKLALECH 12
Score = 29.9 bits (59), Expect(3) = 1e-010
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -1 / +3
Query: 1731 CCFNRQALYGYDP 1693
C FNR A+YGY+P
Sbjct: 48 CVFNRTAIYGYEP 86
Score = 29.0 bits (57), Expect = 4.0
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -3 / +1
Query: 1765 WHSRTCLCGNRMLF 1724
WHSR LCGN ++F
Sbjct: 13 WHSRASLCGNWIVF 54
Score = 24.4 bits (47), Expect(3) = 1e-010
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -1 / +3
Query: 1656 IKSCCGGRKKKDKSYIDSKNR 1594
+ S CGG+KK KS S ++
Sbjct: 114 LSSLCGGKKKASKSERKSSDK 176
>gb|CN817357.1|CN817357 HRO4465_C10_F19ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4465_C10_F19, mRNA sequence
Length = 515
Score = 51.9 bits (107), Expect = 5e-007
Identities = 20/24 (83%), Positives = 23/24 (95%)
Frame = -2 / +2
Query: 503 TIVIVWSVLLASIFSLLWVKIDPF 432
T VIVW++LLASIFSLLWV+IDPF
Sbjct: 5 TRVIVWAILLASIFSLLWVRIDPF 76
Score = 38.2 bits (77), Expect = 0.007
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +1 / -3
Query: 430 MKGSIFTHSSENMEARRTDQTMTMV 504
+ GSI THS E +EARR QTMT+V
Sbjct: 78 VNGSIRTHSKEKIEARRIAQTMTLV 4
>gb|CN817400.1|CN817400 HRO4465_F03_L05ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4465_F03_L05, mRNA sequence
Length = 378
Score = 36.3 bits (73), Expect = 0.025
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +3 / -2
Query: 588 E*WTP*LVATVDSIRHSSHYTNQVNHKHSGGGDQKSCPLEHIQLSKITI 734
E + P VA ++ R S HYT + K G C H Q++K TI
Sbjct: 308 EPFCPMAVAETEAQRKSVHYTEKTYQKRCAGS*ANKCTDNHFQINKCTI 162
>gb|CN817662.1|CN817662 HRO4463_A01_A01ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4463_A01_A01, mRNA sequence
Length = 566
Score = 36.3 bits (73), Expect = 0.025
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +3 / -3
Query: 588 E*WTP*LVATVDSIRHSSHYTNQVNHKHSGGGDQKSCPLEHIQLSKITI 734
E + P VA ++ R S HYT + K G C H Q++K TI
Sbjct: 498 EPFCPMAVAETEAQRKSVHYTEKTYQKRCAGS*ANKCTDNHFQINKCTI 352
>gb|CN820539.1|CN820539 HRO4413_E08_I15ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4413_E08_I15, mRNA
sequence
Length = 543
Score = 32.2 bits (64), Expect = 0.43
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +3 / +3
Query: 1962 DKHHSSGQLIRESKHSWHQPSCGAGSLASFHEKHKQAVATHSHPCQAH 2105
D H+ G+L R K +L S KHK ++A+ S C A+
Sbjct: 78 DSKHADGELRRRQKIETRITCSKISALTSLASKHKDSLASSSPNCDAN 221
>gb|CN816636.1|CN816636 HRO4523_A12_B23ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4523_A12_B23, mRNA sequence
Length = 904
Score = 31.3 bits (62), Expect = 0.81
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2 / -3
Query: 806 TQQRDVQRCHQ*PKTAHFSTNPQCQHHSIEAPKY 907
+Q+RD CH+ TA S++P C+H A Y
Sbjct: 131 SQRRDYCYCHRYSVTAASSSSPACRHPPSRAAPY 30
>gb|CN821188.1|CN821188 HRO4428_E03_J06ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4428_E03_J06, mRNA
sequence
Length = 596
Score = 31.3 bits (62), Expect = 0.81
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +3 / +3
Query: 1179 TIRKINWSRTLEARPKWHAVDG 1244
T R++ +SR+ RP WHA+ G
Sbjct: 489 TRRRLRYSRSNHPRPNWHAIGG 554
>emb|X76737.1|AS12SGL1 A.sativa (L) mRNA for 12S globulin (1556 bp)
Length = 1556
Score = 30.9 bits (61), Expect = 1.1
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +1 / -3
Query: 793 KRPWNTAKRCAEVPPMTQNCSFLHQSSMPTP 885
KRPW + R P+ +NCSF TP
Sbjct: 315 KRPWGSITRRMTDTPVQRNCSFCSSKYSVTP 223
>gb|CN821132.1|CN821132 HRO4427_H03_P05ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4427_H03_P05, mRNA
sequence
Length = 430
Score = 27.2 bits (53), Expect(2) = 1.7
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +1 / +2
Query: 2545 IHCTNKDIDWSQLGWLTLPIISQCKSIEVSFTV 2643
+ C NK W L W+ + II+ I V+ +
Sbjct: 284 VECFNKRFSWEFLKWMFVAIITDLAFILVTVNI 382
Score = 23.5 bits (45), Expect(2) = 1.7
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3 / +1
Query: 2175 HQPWSSPPQ 2201
HQPWS P Q
Sbjct: 97 HQPWSDPVQ 123
>gb|CN819092.1|CN819092 HRO4468_H07_O14ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4468_H07_O14, mRNA sequence
Length = 822
Score = 29.9 bits (59), Expect = 2.1
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -1 / +3
Query: 2697 VWFALSWLLDQFPKWY 2650
+WFA+ WL + P WY
Sbjct: 162 LWFAICWLWKEQPNWY 209
>gb|CN819714.1|CN819714 HRO4403_C07_F13ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4403_C07_F13, mRNA
sequence
Length = 783
Score = 29.9 bits (59), Expect = 2.1
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -1 / +2
Query: 2697 VWFALSWLLDQFPKWY 2650
+WFA+ WL + P WY
Sbjct: 440 LWFAICWLWKEQPNWY 487
>gb|CN820157.1|CN820157 HRO4411_G11_N21ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4411_G11_N21, mRNA
sequence
Length = 841
Score = 29.9 bits (59), Expect = 2.1
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -1 / +2
Query: 2697 VWFALSWLLDQFPKWY 2650
+WFA+ WL + P WY
Sbjct: 368 LWFAICWLWKEQPNWY 415
>gb|CN821300.1|CN821300 HRO4423_G07_N13ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4423_G07_N13, mRNA
sequence
Length = 606
Score = 28.1 bits (55), Expect(2) = 2.3
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +3 / +2
Query: 2025 CGAGSLASFHEKHKQAVATHSHPCQA 2102
C G+ + H++HK PCQA
Sbjct: 122 CTPGNCHAAHKRHKHMAVQRDKPCQA 199
Score = 22.6 bits (43), Expect(2) = 2.3
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +3 / +2
Query: 2592 HPPYHISMQVYRGKFHG 2642
H +H+ QVY ++HG
Sbjct: 554 HAHFHLCNQVYLPQWHG 604
>gb|CN818420.1|CN818420 HRO4469_B07_D13ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4469_B07_D13, mRNA sequence
Length = 656
Score = 26.7 bits (52), Expect(2) = 2.5
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -1 / -3
Query: 279 VAKMCRLSSLYCIWGGQH 226
V +C+L S C +GG+H
Sbjct: 432 VRLLCKLQSFQCAYGGRH 379
Score = 24.0 bits (46), Expect(2) = 2.5
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2 / -1
Query: 125 LWTVVV*SVCWNFKY 81
LWT + S+C+ F+Y
Sbjct: 62 LWTESIFSICFGFQY 18
>gb|CN815875.1|CN815875 HRO4511_D12_H23ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4511_D12_H23, mRNA sequence
Length = 835
Score = 29.5 bits (58), Expect = 2.9
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -1 / +1
Query: 2421 ALSETAEFARKWVPFCKKHNIEPRAPEFYFARKIDYLKDK 2302
A+++ A + K+V FC ++ P PEF RK+ +K
Sbjct: 697 AVNKDASY**KYVQFCINFSLAPNVPEFRE*RKVIICNNK 816
>gb|CN821169.1|CN821169 HRO4428_C06_F12ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4428_C06_F12, mRNA
sequence
Length = 490
Score = 29.5 bits (58), Expect = 2.9
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -2 / +1
Query: 500 IVIVWSVLLASIFSLLWVKIDPFISPTQKALSRGQC 393
+VI WS + ++F L+W+ + P + R C
Sbjct: 337 VVIFWSCICTTLFWLVWLDVFDSSHPEASEVVRNSC 444
>gb|CN821539.1|CN821539 HRO4426_D12_G24ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4426_D12_G24, mRNA
sequence
Length = 700
Score = 29.0 bits (57), Expect = 4.0
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = -2 / -3
Query: 1076 RLAYINTIVYPITSIPLVAYCVLPAICLLTNKFIIPA 966
R + ++ ++ ++ +PL +PA+C LT +PA
Sbjct: 209 RFSVSSSSLFVLSDVPLEEALFVPALCFLTMSMSVPA 99
>gb|BE439177.1|BE439177 CDO772_WHE03C11F ITEC CDO Oat cDNA Library Avena sativa cDNA clone
CDO772_WHE03C11, mRNA sequence
Length = 373
Score = 28.6 bits (56), Expect = 5.5
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1 / -1
Query: 1668 PNIIIKSCCGGRK 1630
P I+IKSCC GRK
Sbjct: 172 PVIVIKSCCHGRK 134
>gb|CN820653.1|CN820653 HRO4415_H04_P07ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4415_H04_P07, mRNA
sequence
Length = 632
Score = 28.6 bits (56), Expect = 5.5
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3 / +3
Query: 1791 RRQCSGLHIDHASLYHQIFVETEHSKFSFLVLDPS 1895
RR L D +L+ + VE HS+FSFL D S
Sbjct: 300 RRPLRRLADDSETLFLHLEVENLHSRFSFLSEDAS 404
>gb|CN821308.1|CN821308 HRO4423_H03_P05ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4423_H03_P05, mRNA
sequence
Length = 475
Score = 28.6 bits (56), Expect = 5.5
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +1 / -3
Query: 556 RITQIAKNSFPNSGPHDW*PLLIAYDTPATIPTRLITSTVVGGI 687
R+ + +K FP S P + A+D TI R T + +GG+
Sbjct: 206 RLLEFSKIDFPRSSSF*ETPYMEAFDASPTIRIRSWTISEIGGL 75
>emb|AJ295998.1|AST295998 Avena strigosa partial resistance gene, clone II 2.2
Length = 494
Score = 28.6 bits (56), Expect = 5.5
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -3 / -3
Query: 2815 PLSDRDCSPAYHPMFLLSISYNSSSGRCLWVVACICY 2705
P+S R C+ + MF+L S +S + + CIC+
Sbjct: 453 PISHRPCTSSTSLMFILFQSSSSPTSSDMRSTRCICF 343
>emb|AJ780937.1| Avena wiestii partial rga gene for putative resistance protein, clone
WIEIII-2
Length = 452
Score = 28.6 bits (56), Expect = 5.5
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -3 / -3
Query: 2815 PLSDRDCSPAYHPMFLLSISYNSSSGRCLWVVACICY 2705
P+S R C+ + MF+L S +S + + CIC+
Sbjct: 441 PISHRPCTSSTSLMFILFQSSSSPTSSDMRSTRCICF 331
>emb|AJ780948.1| Avena sativa partial rga gene for putative resistance protein, clone
SATIV-4
Length = 466
Score = 28.6 bits (56), Expect = 5.5
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -3 / -2
Query: 2815 PLSDRDCSPAYHPMFLLSISYNSSSGRCLWVVACICY 2705
P+S R C+ + MF+L S +S + + CIC+
Sbjct: 441 PISHRPCTSSTSLMFILFQSSSSPTSSDMRSTRCICF 331
>gb|AY566266.1| Avena sativa lipase 1 mRNA, complete cds
Length = 1410
Score = 28.6 bits (56), Expect = 5.5
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -1 / +1
Query: 2154 NPRDHPGMIQVFLGHSGGLDTDG 2086
+P HP Q F GH G TDG
Sbjct: 175 DPTAHPPYGQTFFGHPTGRSTDG 243
>gb|CK780240.1|CK780240 umn41 UMN cDNA from oat Avena sativa cDNA clone JMT4_D09 5', mRNA
sequence
Length = 473
Score = 28.1 bits (55), Expect = 7.5
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3 / -3
Query: 1947 NPH*EDKHHSSGQLIRESKHSWHQPSCGAGSLAS 2048
+P *ED+HH + I ++ H+P+C S S
Sbjct: 144 SPS*EDQHHRTAHPIG*RENWSHKPACHPSSAES 43
>gb|CN814648.1|CN814648 HRO4501_A03_A05ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4501_A03_A05, mRNA sequence
Length = 391
Score = 28.1 bits (55), Expect = 7.5
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1 / -2
Query: 2587 WLTLPIISQCKSIEVSFTVDRIPLWEL 2667
+L+LP++ + +EV T+D LW L
Sbjct: 231 YLSLPLVWEMSLLEVGETLDEFALWML 151
>gb|CN815018.1|CN815018 HRO4505_A01_A01ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4505_A01_A01, mRNA sequence
Length = 338
Score = 28.1 bits (55), Expect = 7.5
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1 / -3
Query: 2587 WLTLPIISQCKSIEVSFTVDRIPLWEL 2667
+L+LP++ + +EV T+D LW L
Sbjct: 198 YLSLPLVWEMSLLEVGETLDEFALWML 118
>gb|CN815299.1|CN815299 HRO4508_B07_D14ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4508_B07_D14, mRNA sequence
Length = 470
Score = 28.1 bits (55), Expect = 7.5
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1 / -3
Query: 2587 WLTLPIISQCKSIEVSFTVDRIPLWEL 2667
+L+LP++ + +EV T+D LW L
Sbjct: 252 YLSLPLVWEMSLLEVGETLDEFALWML 172
>gb|CN816820.1|CN816820 HRO4525_B10_C19ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4525_B10_C19, mRNA sequence
Length = 416
Score = 28.1 bits (55), Expect = 7.5
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1 / -2
Query: 2587 WLTLPIISQCKSIEVSFTVDRIPLWEL 2667
+L+LP++ + +EV T+D LW L
Sbjct: 220 YLSLPLVWEMSLLEVGETLDEFALWML 140
>gb|CN818411.1|CN818411 HRO4469_C04_F07ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4469_C04_F07, mRNA sequence
Length = 461
Score = 28.1 bits (55), Expect = 7.5
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +3 / -3
Query: 1683 LSIQDHSHTRPAY*NSILFP 1742
LS+++ SHTRPA +SI P
Sbjct: 72 LSLRNQSHTRPALSSSIAMP 13
>gb|CN819266.1|CN819266 HRO4452_A04_A08ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4452_A04_A08, mRNA sequence
Length = 654
Score = 28.1 bits (55), Expect = 7.5
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -3 / -2
Query: 2791 PAYHPMFLLSISYNSSSGRCLWVVACICYL 2702
P YHP F+L N SS CL+ C +
Sbjct: 377 P*YHPPFVLVFFSNESSQSCLYPSLYSCII 288
>gb|CN819308.1|CN819308 HRO4452_E01_I02ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4452_E01_I02, mRNA sequence
Length = 376
Score = 28.1 bits (55), Expect = 7.5
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1 / -3
Query: 2587 WLTLPIISQCKSIEVSFTVDRIPLWEL 2667
+L+LP++ + +EV T+D LW L
Sbjct: 128 YLSLPLVWEMSLLEVGETLDEFALWML 48
>gb|CN820033.1|CN820033 HRO4410_D03_G06ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4410_D03_G06, mRNA
sequence
Length = 769
Score = 28.1 bits (55), Expect = 7.5
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +3 / -2
Query: 2025 CGAGSLASFHEKHKQAVATHSHPCQA 2102
C G+ + H++HK PCQA
Sbjct: 291 CTPGNCHAAHKRHKHMAVQRDKPCQA 214
>gb|CN820620.1|CN820620 HRO4415_E06_J11ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4415_E06_J11, mRNA
sequence
Length = 386
Score = 28.1 bits (55), Expect = 7.5
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +3 / -2
Query: 1947 NPH*EDKHHSSGQLIRESKHSWHQPSC 2027
+P *ED+HH + I ++ H+P+C
Sbjct: 88 SPS*EDQHHRTAHPIG*RENGKHKPAC 8
>gb|CN820713.1|CN820713 HRO4416_G01_N02ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4416_G01_N02, mRNA
sequence
Length = 454
Score = 28.1 bits (55), Expect = 7.5
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1 / -2
Query: 2587 WLTLPIISQCKSIEVSFTVDRIPLWEL 2667
+L+LP++ + +EV T+D LW L
Sbjct: 171 YLSLPLVWEMSLLEVGETLDEFALWML 91
>gb|CN820796.1|CN820796 HRO4420_A02_B04ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4420_A02_B04, mRNA
sequence
Length = 417
Score = 28.1 bits (55), Expect = 7.5
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1 / -2
Query: 2587 WLTLPIISQCKSIEVSFTVDRIPLWEL 2667
+L+LP++ + +EV T+D LW L
Sbjct: 206 YLSLPLVWEMSLLEVGETLDEFALWML 126
>gb|CN821631.1|CN821631 HRO4408_E02_J04ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4408_E02_J04, mRNA
sequence
Length = 357
Score = 28.1 bits (55), Expect = 7.5
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1 / -2
Query: 2587 WLTLPIISQCKSIEVSFTVDRIPLWEL 2667
+L+LP++ + +EV T+D LW L
Sbjct: 182 YLSLPLVWEMSLLEVGETLDEFALWML 102
>emb|AJ780947.1| Avena insularis partial rga gene for putative resistance protein,
clone INSIII-2
Length = 466
Score = 28.1 bits (55), Expect = 7.5
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -3 / -2
Query: 2815 PLSDRDCSPAYHPMFLLSISYNSSSGRCLWVVACICY 2705
P+S R C+ + MF+L S +S + + CIC+
Sbjct: 441 PISHRPCTSSSSWMFILFQSSSSPTSSDMRSTRCICF 331
Database: Avena_nucl_with_EST.fasta
Posted date: May 2, 2006 2:37 PM
Number of letters in database: 4,702,463
Number of sequences in database: 8143
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 34,444,483
Number of Sequences: 8143
Number of extensions: 536010
Number of successful extensions: 2189
Number of sequences better than 10.0: 44
length of database: 1,567,487
effective HSP length: 46
effective length of database: 1,192,909
effective search space used: 1079582645
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)