TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131572.2.6
(1100 letters)
Database: Avena_nucl_with_EST.fasta
8143 sequences; 4,702,463 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN815034.1|CN815034 HRO4505_B06_C11ZS5 Lib AA071E1X Aven... 87 1e-041
gb|CN816101.1|CN816101 HRO4517_A05_A09ZS5 Lib AA071E1X Aven... 86 8e-040
gb|CN816873.1|CN816873 HRO4525_G05_M09ZS5 Lib AA071E1X Aven... 87 3e-037
gb|CN821053.1|CN821053 HRO4427_A04_B07ZS5 Lib AA069E1X Aven... 87 2e-035
gb|CN815850.1|CN815850 HRO4511_B09_D17ZS5 Lib AA071E1X Aven... 87 3e-034
gb|CN814955.1|CN814955 HRO4504_C09_F18ZS5 Lib AA071E1X Aven... 95 4e-031
gb|CN814789.1|CN814789 HRO4502_E05_I10ZS5 Lib AA071E1X Aven... 87 1e-030
gb|CN816425.1|CN816425 HRO4520_F02_L04ZS5 Lib AA071E1X Aven... 87 5e-030
gb|CN820644.1|CN820644 HRO4415_G07_N13ZS5 Lib AA069E1X Aven... 62 2e-023
gb|CN816150.1|CN816150 HRO4517_E08_I15ZS5 Lib AA071E1X Aven... 100 8e-022
gb|CN814894.1|CN814894 HRO4503_F08_L15ZS5 Lib AA071E1X Aven... 99 2e-021
gb|CN816381.1|CN816381 HRO4520_A12_B24ZS5 Lib AA071E1X Aven... 97 4e-021
>gb|CN815034.1|CN815034 HRO4505_B06_C11ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4505_B06_C11, mRNA sequence
Length = 629
Score = 87.2 bits (184), Expect(3) = 1e-041
Identities = 33/57 (57%), Positives = 43/57 (75%)
Frame = +2 / +1
Query: 635 MLETQLLMDIGMMTMTKGRQHDEKEWRQLFTKAGFSEYKILKEFGTRVAFEVYP*DI 805
M E Q+LMD+ M+ T+GRQ DE +WRQLF KAGFS+YK++K+ G R FEVY * +
Sbjct: 322 MFEAQILMDMAMLVNTRGRQRDENDWRQLFMKAGFSDYKVVKKLGARGVFEVYK*RV 492
Score = 77.6 bits (163), Expect(3) = 1e-041
Identities = 30/62 (48%), Positives = 43/62 (69%)
Frame = +2 / +1
Query: 443 INYVEGDMFSFIPPAQTXXXXXXXXXXTDEECVKLLAQCRKAIPSRKDGGKVIIGDIMID 622
+NYV GD+F +P +Q +D++CVK+L+QCR AIPSR++GGKVII DI++
Sbjct: 124 VNYVAGDLFHSVPKSQAVLLKLVLHHWSDDDCVKILSQCRSAIPSREEGGKVIIIDILVG 303
Query: 623 HS 628
S
Sbjct: 304 PS 309
Score = 73.5 bits (154), Expect(3) = 1e-033
Identities = 28/55 (50%), Positives = 36/55 (65%)
Frame = -2 / -3
Query: 799 SRIDFEGNTSSKFLENLVFAEPCFGEELTPFFFVVLSSFCHGHHADVHQELSFQH 635
S +DFE + S FL+N + EPCF EELTP F+ L++ C H VHQ LSF+H
Sbjct: 486 SLVDFEDTSCS*FLDNFIVTEPCFHEELTPVIFITLTASCVHKHGHVHQNLSFKH 322
Score = 69.3 bits (145), Expect(3) = 1e-033
Identities = 31/55 (56%), Positives = 39/55 (70%)
Frame = -3 / -1
Query: 612 MSPIITFPPSFREGIAFRH*ARSLTHSSSVRWCSTSFSTTV*AGGMKLNMSPST* 448
+S +ITFPPS REG+A H* + T SSS++WCSTS S T * G + N SP+T*
Sbjct: 293 ISMMITFPPSSREGMALLH*DKIFTQSSSLQWCSTSLSNTA*DFGTEWNKSPAT* 129
Score = 63.4 bits (132), Expect(3) = 2e-025
Identities = 34/55 (61%), Positives = 36/55 (65%)
Frame = -3 / -1
Query: 798 HG*TSKATRVPNSLRILYSLNPALVKS*RHSFSSCCRPFVMVIMPMSIRS*VSSI 634
H *TSK R PN L L SLNPA +KS*R SFSS RP V M MSIR * S+I
Sbjct: 485 HL*TSKTPRAPNFLTTL*SLNPAFMKS*RQSFSSR*RPLVFTSMAMSIRI*ASNI 321
Score = 55.1 bits (114), Expect(3) = 2e-025
Identities = 25/58 (43%), Positives = 34/58 (58%)
Frame = -2 / -3
Query: 619 NHNVTDYNFPAILP*RNRLPALSQKLDALLIGQVVQHKL*HDSLSRWNETEHVTFDIV 446
N N+ D + P++L *RN P L Q L ++I VVQHKL L W+ E +T +IV
Sbjct: 300 NQNIYDDHLPSLLT*RNGTPTLRQDLHTVVITPVVQHKLEQHRLRLWDGVEQITSNIV 127
Score = 39.1 bits (79), Expect(3) = 1e-041
Identities = 18/35 (51%), Positives = 19/35 (54%)
Frame = +2 / +1
Query: 335 GDDKGARAIAKAFPHIKCTVLXXXXXXXXXXXDGV 439
GD ARAI KA PHIKCTVL DG+
Sbjct: 19 GD*TTARAITKAHPHIKCTVLDLPKVIEKVPSDGI 123
Score = 33.6 bits (67), Expect(3) = 1e-033
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -1 / -2
Query: 434 HQPVWRQ*SWEGPAQCILCVGRPWQWP 354
HQ Q E PAQC C PW WP
Sbjct: 118 HQTELSQSPLEDPAQCT*CADGPW*WP 38
Score = 29.9 bits (59), Expect(3) = 2e-025
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3 / -1
Query: 435 PSAGLAAMILGGASTVHFMCG 373
PS G ++ G +STVH MCG
Sbjct: 119 PSDGTFSITFGRSSTVHLMCG 57
>gb|CN816101.1|CN816101 HRO4517_A05_A09ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4517_A05_A09, mRNA sequence
Length = 652
Score = 85.8 bits (181), Expect(3) = 8e-040
Identities = 34/62 (54%), Positives = 46/62 (74%)
Frame = +2 / +3
Query: 443 INYVEGDMFSFIPPAQTXXXXXXXXXXTDEECVKLLAQCRKAIPSRKDGGKVIIGDIMID 622
INYV GD+F +PP+Q +DE+CVK+LAQCRKAIPSR++GGKVII +I+++
Sbjct: 90 INYVAGDLFHTVPPSQAVMLKLVLHFWSDEDCVKILAQCRKAIPSREEGGKVIIIEIVVE 269
Query: 623 HS 628
S
Sbjct: 270 PS 275
Score = 83.1 bits (175), Expect(3) = 8e-040
Identities = 33/56 (58%), Positives = 41/56 (73%)
Frame = +2 / +3
Query: 635 MLETQLLMDIGMMTMTKGRQHDEKEWRQLFTKAGFSEYKILKEFGTRVAFEVYP*D 802
M E QLL D+ MM T+G Q DEK WR+LF +AGF++YKI+K+ G R EVYP*D
Sbjct: 288 MFEAQLLFDMLMMVNTRGGQRDEKHWRELFMQAGFTDYKIVKKLGARSVIEVYP*D 455
Score = 65.2 bits (136), Expect(3) = 7e-024
Identities = 34/62 (54%), Positives = 40/62 (64%)
Frame = -3 / -1
Query: 627 EWSIIMSPIITFPPSFREGIAFRH*ARSLTHSSSVRWCSTSFSTTV*AGGMKLNMSPST* 448
E S +S IITFPPS REG+AF H AR T SSS++ STS S T * GG SP+T*
Sbjct: 274 EGSTTISMIITFPPSSREGMAFLHWARIFTQSSSLQK*STSLSITA*DGGTVWKRSPAT* 95
Query: 447 FI 442
+
Sbjct: 94 LM 89
Score = 54.2 bits (112), Expect(3) = 7e-024
Identities = 35/90 (38%), Positives = 46/90 (51%)
Frame = -3 / -1
Query: 903 SMNTL*AHPPSSFIYDIVMPKPATHMHTYVCKYISHG*TSKATRVPNSLRILYSLNPALV 724
++ L H SS I + K ++ Y K S+G*TS R P+ IL S+NPA +
Sbjct: 556 TLRKLIKHLSSSKIPGTLKYKTKHFLYLYP*KTPSYG*TSMTDRAPSFFTIL*SVNPACI 377
Query: 723 KS*RHSFSSCCRPFVMVIMPMSIRS*VSSI 634
S R FSS P V IM +S RS S+I
Sbjct: 376 NSSRQCFSSR*PPLVFTIMSISKRSWASNI 287
Score = 28.6 bits (56), Expect(3) = 8e-040
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = +2 / +3
Query: 365 KAFPHIKCTVL 397
KA+PH+KCTVL
Sbjct: 15 KAYPHLKCTVL 47
Score = 24.0 bits (46), Expect(3) = 7e-024
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -3 / -1
Query: 444 IFTPSAGLAAMILGGASTVHFMCG 373
+ T G ++ G +STVH CG
Sbjct: 94 LMTS*GGAFSITFGRSSTVHLRCG 23
>gb|CN816873.1|CN816873 HRO4525_G05_M09ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4525_G05_M09, mRNA sequence
Length = 662
Score = 87.2 bits (184), Expect(3) = 3e-037
Identities = 33/57 (57%), Positives = 43/57 (75%)
Frame = +2 / +2
Query: 635 MLETQLLMDIGMMTMTKGRQHDEKEWRQLFTKAGFSEYKILKEFGTRVAFEVYP*DI 805
M E Q+LMD+ M+ T+GRQ DE +WRQLF KAGFS+YK++K+ G R FEVY * +
Sbjct: 269 MFEAQILMDMAMLVNTRGRQRDENDWRQLFMKAGFSDYKVVKKLGARGVFEVYK*RV 439
Score = 77.6 bits (163), Expect(3) = 3e-037
Identities = 30/62 (48%), Positives = 43/62 (69%)
Frame = +2 / +2
Query: 443 INYVEGDMFSFIPPAQTXXXXXXXXXXTDEECVKLLAQCRKAIPSRKDGGKVIIGDIMID 622
+NYV GD+F +P +Q +D++CVK+L+QCR AIPSR++GGKVII DI++
Sbjct: 71 VNYVAGDLFHSVPKSQAVLLKLVLHHWSDDDCVKILSQCRSAIPSREEGGKVIIIDILVG 250
Query: 623 HS 628
S
Sbjct: 251 PS 256
Score = 73.5 bits (154), Expect(3) = 3e-031
Identities = 28/55 (50%), Positives = 36/55 (65%)
Frame = -2 / -2
Query: 799 SRIDFEGNTSSKFLENLVFAEPCFGEELTPFFFVVLSSFCHGHHADVHQELSFQH 635
S +DFE + S FL+N + EPCF EELTP F+ L++ C H VHQ LSF+H
Sbjct: 433 SLVDFEDTSCS*FLDNFIVTEPCFHEELTPVIFITLTASCVHKHGHVHQNLSFKH 269
Score = 69.3 bits (145), Expect(3) = 3e-031
Identities = 31/55 (56%), Positives = 39/55 (70%)
Frame = -3 / -3
Query: 612 MSPIITFPPSFREGIAFRH*ARSLTHSSSVRWCSTSFSTTV*AGGMKLNMSPST* 448
+S +ITFPPS REG+A H* + T SSS++WCSTS S T * G + N SP+T*
Sbjct: 240 ISMMITFPPSSREGMALLH*DKIFTQSSSLQWCSTSLSNTA*DFGTEWNKSPAT* 76
Score = 63.4 bits (132), Expect(2) = 1e-021
Identities = 34/55 (61%), Positives = 36/55 (65%)
Frame = -3 / -3
Query: 798 HG*TSKATRVPNSLRILYSLNPALVKS*RHSFSSCCRPFVMVIMPMSIRS*VSSI 634
H *TSK R PN L L SLNPA +KS*R SFSS RP V M MSIR * S+I
Sbjct: 432 HL*TSKTPRAPNFLTTL*SLNPAFMKS*RQSFSSR*RPLVFTSMAMSIRI*ASNI 268
Score = 55.1 bits (114), Expect(2) = 1e-021
Identities = 25/58 (43%), Positives = 34/58 (58%)
Frame = -2 / -2
Query: 619 NHNVTDYNFPAILP*RNRLPALSQKLDALLIGQVVQHKL*HDSLSRWNETEHVTFDIV 446
N N+ D + P++L *RN P L Q L ++I VVQHKL L W+ E +T +IV
Sbjct: 247 NQNIYDDHLPSLLT*RNGTPTLRQDLHTVVITPVVQHKLEQHRLRLWDGVEQITSNIV 74
Score = 25.8 bits (50), Expect(3) = 3e-031
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3 / -2
Query: 408 LGGASTVHFMCG 373
LG +STVH MCG
Sbjct: 40 LGRSSTVHLMCG 5
Score = 24.0 bits (46), Expect(3) = 3e-037
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2 / +3
Query: 374 PHIKCTVL 397
PHIKCTVL
Sbjct: 6 PHIKCTVL 29
>gb|CN821053.1|CN821053 HRO4427_A04_B07ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4427_A04_B07, mRNA
sequence
Length = 644
Score = 87.2 bits (184), Expect(2) = 2e-035
Identities = 33/53 (62%), Positives = 41/53 (77%)
Frame = +2 / +3
Query: 635 MLETQLLMDIGMMTMTKGRQHDEKEWRQLFTKAGFSEYKILKEFGTRVAFEVY 793
M E Q+LMD+ M+ T+GRQ DE +WRQLF KAGFS+YKI+K+ G R FEVY
Sbjct: 237 MFEAQILMDMAMLVNTRGRQRDENDWRQLFMKAGFSDYKIVKKLGARGVFEVY 395
Score = 77.6 bits (163), Expect(2) = 2e-035
Identities = 31/62 (50%), Positives = 42/62 (67%)
Frame = +2 / +3
Query: 443 INYVEGDMFSFIPPAQTXXXXXXXXXXTDEECVKLLAQCRKAIPSRKDGGKVIIGDIMID 622
+NYV GD+F +P +Q +DE+CVK+L+QCR AIPSR+ GGKVII DI++
Sbjct: 39 VNYVAGDLFHSVPKSQAVLLKLVLHHWSDEDCVKILSQCRNAIPSREKGGKVIIIDILVG 218
Query: 623 HS 628
S
Sbjct: 219 PS 224
Score = 73.5 bits (154), Expect(2) = 7e-030
Identities = 28/55 (50%), Positives = 36/55 (65%)
Frame = -2 / -1
Query: 799 SRIDFEGNTSSKFLENLVFAEPCFGEELTPFFFVVLSSFCHGHHADVHQELSFQH 635
S +DFE + S FL+N + EPCF EELTP F+ L++ C H VHQ LSF+H
Sbjct: 401 SLVDFEDTSCS*FLDNFIVTEPCFHEELTPVIFITLTASCVHKHGHVHQNLSFKH 237
Score = 72.5 bits (152), Expect(2) = 7e-030
Identities = 33/55 (60%), Positives = 39/55 (70%)
Frame = -3 / -2
Query: 612 MSPIITFPPSFREGIAFRH*ARSLTHSSSVRWCSTSFSTTV*AGGMKLNMSPST* 448
MS +ITFPP REGIAF H* + T SSS++WCSTS S T * G + N SP+T*
Sbjct: 208 MSMMITFPPFSREGIAFLH*DKIFTQSSSLQWCSTSLSNTA*DFGTEWNKSPAT* 44
Score = 65.7 bits (137), Expect(2) = 2e-022
Identities = 35/55 (63%), Positives = 37/55 (67%)
Frame = -3 / -2
Query: 798 HG*TSKATRVPNSLRILYSLNPALVKS*RHSFSSCCRPFVMVIMPMSIRS*VSSI 634
H *TSK R PN L IL SLNPA +KS*R SFSS RP V M MSIR * S+I
Sbjct: 400 HL*TSKTPRAPNFLTIL*SLNPAFMKS*RQSFSSR*RPLVFTSMAMSIRI*ASNI 236
Score = 55.6 bits (115), Expect(2) = 2e-022
Identities = 27/58 (46%), Positives = 34/58 (58%)
Frame = -2 / -1
Query: 619 NHNVTDYNFPAILP*RNRLPALSQKLDALLIGQVVQHKL*HDSLSRWNETEHVTFDIV 446
N NV D + P++L *RN +P L L +LI VVQHKL L W+ E VT +IV
Sbjct: 215 NQNVYDDHLPSLLT*RNSIPTLR*DLHTILITPVVQHKLEQHRLRLWDGVEQVTSNIV 42
>gb|CN815850.1|CN815850 HRO4511_B09_D17ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4511_B09_D17, mRNA sequence
Length = 621
Score = 86.8 bits (183), Expect(2) = 3e-034
Identities = 34/57 (59%), Positives = 43/57 (75%)
Frame = +2 / +2
Query: 635 MLETQLLMDIGMMTMTKGRQHDEKEWRQLFTKAGFSEYKILKEFGTRVAFEVYP*DI 805
M E Q+LMD+ M+ T+GRQ DE +WRQLF KAGFS+YKI+K+ G R FEVY * +
Sbjct: 215 MFEAQVLMDMAMLVNTRGRQRDENDWRQLFMKAGFSDYKIVKKVGARGVFEVYK*RV 385
Score = 73.9 bits (155), Expect(2) = 3e-034
Identities = 29/62 (46%), Positives = 42/62 (67%)
Frame = +2 / +2
Query: 443 INYVEGDMFSFIPPAQTXXXXXXXXXXTDEECVKLLAQCRKAIPSRKDGGKVIIGDIMID 622
+ YV GD+F +P +Q +DE+CVK+L+QC+ AIPSR++GGKVII DI++
Sbjct: 17 VYYVAGDLFHSVPKSQAVMLKLVLHRWSDEDCVKILSQCKSAIPSREEGGKVIIIDILVG 196
Query: 623 HS 628
S
Sbjct: 197 PS 202
Score = 73.0 bits (153), Expect(2) = 1e-026
Identities = 27/55 (49%), Positives = 35/55 (63%)
Frame = -2 / -3
Query: 799 SRIDFEGNTSSKFLENLVFAEPCFGEELTPFFFVVLSSFCHGHHADVHQELSFQH 635
S +DFE + S FL+N + EPCF EELTP F+ L++ C H VHQ L F+H
Sbjct: 379 SLVDFEDTSCSYFLDNFIVTEPCFHEELTPVIFITLTASCVDKHGHVHQNLGFKH 215
Score = 62.9 bits (131), Expect(2) = 2e-021
Identities = 33/55 (60%), Positives = 37/55 (67%)
Frame = -3 / -1
Query: 798 HG*TSKATRVPNSLRILYSLNPALVKS*RHSFSSCCRPFVMVIMPMSIRS*VSSI 634
H *TSK R P L IL SLNPA +KS*R SFSS RP V+ M MSIR+ S+I
Sbjct: 378 HL*TSKTPRAPTFLTIL*SLNPAFMKS*RQSFSSR*RPLVLTSMAMSIRTWASNI 214
Score = 62.5 bits (130), Expect(2) = 1e-026
Identities = 30/55 (54%), Positives = 38/55 (69%)
Frame = -3 / -1
Query: 612 MSPIITFPPSFREGIAFRH*ARSLTHSSSVRWCSTSFSTTV*AGGMKLNMSPST* 448
+S +ITFPPS REG+A H* + T SSS++ CSTS S T * G + N SP+T*
Sbjct: 186 ISMMITFPPSSREGMALLH*DKIFTQSSSLQRCSTSLSITA*DFGTEWNKSPAT* 22
Score = 54.7 bits (113), Expect(2) = 2e-021
Identities = 25/58 (43%), Positives = 33/58 (56%)
Frame = -2 / -3
Query: 619 NHNVTDYNFPAILP*RNRLPALSQKLDALLIGQVVQHKL*HDSLSRWNETEHVTFDIV 446
N N+ D + P++L *RN L Q L +LI VQHKL H L W+ E VT ++V
Sbjct: 193 NQNIYDDHLPSLLT*RNGTLTLRQDLHTILITPAVQHKLEHHGLRLWDGVEQVTSNVV 20
>gb|CN814955.1|CN814955 HRO4504_C09_F18ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4504_C09_F18, mRNA sequence
Length = 648
Score = 95.0 bits (201), Expect(2) = 2e-028
Identities = 38/72 (52%), Positives = 48/72 (66%)
Frame = +2 / +1
Query: 587 GGKVIIGDIMIDHSGPMLETQLLMDIGMMTMTKGRQHDEKEWRQLFTKAGFSEYKILKEF 766
G ++I ++ SGP E +LLMD+ MM T GRQ DE +W +FTKAGFS Y I+K+
Sbjct: 163 GKVIVIDIVVDSSSGPTHEAELLMDVAMMVFTNGRQRDESDWGDIFTKAGFSGYNIVKKL 342
Query: 767 GTRVAFEVYP*D 802
G R FEVYP*D
Sbjct: 343 GARGVFEVYP*D 378
Score = 91.3 bits (193), Expect(2) = 3e-024
Identities = 34/62 (54%), Positives = 46/62 (74%)
Frame = +2 / +1
Query: 443 INYVEGDMFSFIPPAQTXXXXXXXXXXTDEECVKLLAQCRKAIPSRKDGGKVIIGDIMID 622
+NYV GDMF +PPAQ +DE+CVK+LAQC+KA+PSR++GGKVI+ DI++D
Sbjct: 16 VNYVAGDMFKLVPPAQAVLVKLVLHHWSDEDCVKILAQCKKAVPSREEGGKVIVIDIVVD 195
Query: 623 HS 628
S
Sbjct: 196 SS 201
Score = 84.9 bits (179), Expect(2) = 4e-031
Identities = 38/60 (63%), Positives = 43/60 (71%)
Frame = -3 / -2
Query: 627 EWSIIMSPIITFPPSFREGIAFRH*ARSLTHSSSVRWCSTSFSTTV*AGGMKLNMSPST* 448
E S MS ITFPPS R+G AF H*AR T SSS++WC TS + T *AGG LNMSP+T*
Sbjct: 200 EESTTMSMTITFPPSSRDGTAFLH*ARIFTQSSSLQWCRTSLTNTA*AGGTSLNMSPAT* 21
Score = 65.2 bits (136), Expect(2) = 4e-031
Identities = 33/60 (55%), Positives = 37/60 (61%)
Frame = -3 / -2
Query: 804 ISHG*TSKATRVPNSLRILYSLNPALVKS*RHSFSSCCRPFVMVIMPMSIRS*VSSIGPE 625
+SHG TSK R P+ +L LNPALVK S SS CRP V IM SIRS S +GPE
Sbjct: 380 LSHGYTSKTPRAPSFFTML*PLNPALVKMSPQSDSSRCRPLVNTIMATSIRSSAS*VGPE 201
Score = 46.4 bits (95), Expect(2) = 2e-028
Identities = 23/56 (41%), Positives = 31/56 (55%)
Frame = +1 / +3
Query: 445 KLCRR*HVQFHSTCSNCRAKACAAPPDR*GVRQASGSMPEGDSFTEGWRESYNR*H 612
+L RR HVQ S+C +AC+AP + G+R+ S+ EG S G RES H
Sbjct: 18 QLRRRRHVQARPASSSCVGQACSAPLE*RGLREDPSSVQEGRSVARGGRESDRHRH 185
Score = 35.9 bits (72), Expect(2) = 3e-024
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = +1 / +3
Query: 649 APDGHRHDDHDKRTTARRKRMASALHQSRVQRIQDSQGIWNSCCLRSLSVR 801
APDG HD + TARR + HQSR+ + + +S CL +S+R
Sbjct: 225 APDGCSHDGVHQWPTARRV*LGRHFHQSRI*WL*HCEETGSSWCL*GISMR 377
>gb|CN814789.1|CN814789 HRO4502_E05_I10ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4502_E05_I10, mRNA sequence
Length = 596
Score = 87.2 bits (184), Expect(2) = 1e-030
Identities = 33/53 (62%), Positives = 41/53 (77%)
Frame = +2 / -3
Query: 635 MLETQLLMDIGMMTMTKGRQHDEKEWRQLFTKAGFSEYKILKEFGTRVAFEVY 793
M E Q+LMD+ M+ T+GRQ DE +WRQLF KAGFS+YKI+K+ G R FEVY
Sbjct: 423 MFEAQILMDMAMLVNTRGRQRDENDWRQLFMKAGFSDYKIVKKLGARGVFEVY 265
Score = 73.5 bits (154), Expect(2) = 5e-027
Identities = 28/55 (50%), Positives = 36/55 (65%)
Frame = -2 / +1
Query: 799 SRIDFEGNTSSKFLENLVFAEPCFGEELTPFFFVVLSSFCHGHHADVHQELSFQH 635
S +DFE + S FL+N + EPCF EELTP F+ L++ C H VHQ LSF+H
Sbjct: 259 SLVDFEDTSCS*FLDNFIVTEPCFHEELTPVIFITLTASCVHKHGHVHQNLSFKH 423
Score = 62.9 bits (131), Expect(2) = 5e-027
Identities = 28/45 (62%), Positives = 32/45 (71%)
Frame = -3 / +2
Query: 612 MSPIITFPPSFREGIAFRH*ARSLTHSSSVRWCSTSFSTTV*AGG 478
MS +ITFPP REGIAF H* + T SSS++WCSTS S T * G
Sbjct: 452 MSMMITFPPFSREGIAFLH*DKIFTQSSSLQWCSTSLSNTA*DFG 586
Score = 61.1 bits (127), Expect(2) = 1e-030
Identities = 25/51 (49%), Positives = 34/51 (66%)
Frame = +2 / -3
Query: 476 IPPAQTXXXXXXXXXXTDEECVKLLAQCRKAIPSRKDGGKVIIGDIMIDHS 628
+P +Q +DE+CVK+L+QCR AIPSR+ GGKVII DI++ S
Sbjct: 588 VPKSQAVLLKLVLHHWSDEDCVKILSQCRNAIPSREKGGKVIIIDILVGPS 436
>gb|CN816425.1|CN816425 HRO4520_F02_L04ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4520_F02_L04, mRNA sequence
Length = 538
Score = 87.2 bits (184), Expect(2) = 5e-030
Identities = 33/53 (62%), Positives = 41/53 (77%)
Frame = +2 / +1
Query: 635 MLETQLLMDIGMMTMTKGRQHDEKEWRQLFTKAGFSEYKILKEFGTRVAFEVY 793
M E Q+LMD+ M+ T+GRQ DE +WRQLF KAGFS+YKI+K+ G R FEVY
Sbjct: 133 MFEAQILMDMAMLVNTRGRQRDENDWRQLFMKAGFSDYKIVKKLGARGVFEVY 291
Score = 73.5 bits (154), Expect(2) = 7e-021
Identities = 28/55 (50%), Positives = 36/55 (65%)
Frame = -2 / -2
Query: 799 SRIDFEGNTSSKFLENLVFAEPCFGEELTPFFFVVLSSFCHGHHADVHQELSFQH 635
S +DFE + S FL+N + EPCF EELTP F+ L++ C H VHQ LSF+H
Sbjct: 297 SLVDFEDTSCS*FLDNFIVTEPCFHEELTPVIFITLTASCVHKHGHVHQNLSFKH 133
Score = 59.3 bits (123), Expect(2) = 5e-030
Identities = 23/35 (65%), Positives = 30/35 (85%)
Frame = +2 / +1
Query: 524 TDEECVKLLAQCRKAIPSRKDGGKVIIGDIMIDHS 628
+DE+CVK+L+QCR AIPSR+ GGKVII DI++ S
Sbjct: 16 SDEDCVKILSQCRNAIPSREKGGKVIIIDILVGPS 120
Score = 42.3 bits (86), Expect(2) = 7e-021
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = -3 / -3
Query: 612 MSPIITFPPSFREGIAFRH*ARSLTHSSSV 523
MS +ITFPP REGIAF H* + T SSS+
Sbjct: 104 MSMMITFPPFSREGIAFLH*DKIFTQSSSL 15
>gb|CN820644.1|CN820644 HRO4415_G07_N13ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4415_G07_N13, mRNA
sequence
Length = 614
Score = 62.5 bits (130), Expect(2) = 2e-023
Identities = 31/59 (52%), Positives = 35/59 (59%)
Frame = -3 / -3
Query: 801 SHG*TSKATRVPNSLRILYSLNPALVKS*RHSFSSCCRPFVMVIMPMSIRS*VSSIGPE 625
SHG TSK R P+ +L +NPALVK S SS CRP V IM S RS S +GPE
Sbjct: 315 SHGYTSKTPRAPSFFTML*PVNPALVKISAQSDSSRCRPLVKTIMATSTRSSASCVGPE 139
Score = 62.0 bits (129), Expect(2) = 2e-023
Identities = 26/43 (60%), Positives = 32/43 (74%)
Frame = -3 / -3
Query: 627 EWSIIMSPIITFPPSFREGIAFRH*ARSLTHSSSVRWCSTSFS 499
E S MS ITFPPS R+G+AF H*AR T SSS++WC+TS +
Sbjct: 138 EGSTSMSMTITFPPSSRDGMAFLH*ARIFTQSSSLQWCNTSLT 10
>gb|CN816150.1|CN816150 HRO4517_E08_I15ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4517_E08_I15, mRNA sequence
Length = 455
Score = 99.6 bits (211), Expect = 8e-022
Identities = 38/60 (63%), Positives = 48/60 (80%)
Frame = +2 / +1
Query: 626 SGPMLETQLLMDIGMMTMTKGRQHDEKEWRQLFTKAGFSEYKILKEFGTRVAFEVYP*DI 805
SGPMLETQLLMD+ M+T T+GRQ DE +W +FTKAGF++YKI+K+ G R EVYP* +
Sbjct: 25 SGPMLETQLLMDVLMLTCTRGRQRDENDWSSIFTKAGFNDYKIIKKLGARGVIEVYP*GV 204
>gb|CN814894.1|CN814894 HRO4503_F08_L15ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4503_F08_L15, mRNA sequence
Length = 567
Score = 98.7 bits (209), Expect = 2e-021
Identities = 39/58 (67%), Positives = 46/58 (79%)
Frame = +2 / +3
Query: 626 SGPMLETQLLMDIGMMTMTKGRQHDEKEWRQLFTKAGFSEYKILKEFGTRVAFEVYP* 799
SGPMLETQLLMD+ M+T T+GRQ DE +W +FTKAGFS+YKI+K G R EVYP*
Sbjct: 39 SGPMLETQLLMDVLMLTCTRGRQRDENDWSSIFTKAGFSDYKIIKMLGARGVIEVYP* 212
>gb|CN816381.1|CN816381 HRO4520_A12_B24ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4520_A12_B24, mRNA sequence
Length = 696
Score = 97.3 bits (206), Expect = 4e-021
Identities = 37/72 (51%), Positives = 51/72 (70%)
Frame = +2 / -1
Query: 587 GGKVIIGDIMIDHSGPMLETQLLMDIGMMTMTKGRQHDEKEWRQLFTKAGFSEYKILKEF 766
G ++I ++ SGP E +LLMD+GMM +T GRQ DE +W ++FTKAGF+ Y ++K+
Sbjct: 435 GKVIVIDIVVDSSSGPTHEAELLMDVGMMVLTNGRQRDESDWGEIFTKAGFTGYNLVKKL 256
Query: 767 GTRVAFEVYP*D 802
G R FEVYP*D
Sbjct: 255 GARGVFEVYP*D 220
Database: Avena_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:15 PM
Number of letters in database: 4,702,463
Number of sequences in database: 8143
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 13,869,520
Number of Sequences: 8143
Number of extensions: 228993
Number of successful extensions: 2218
Number of sequences better than 1.0e-020: 13
length of database: 1,567,487
effective HSP length: 44
effective length of database: 1,209,195
effective search space used: 389360790
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)