TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.392
(725 letters)
Database: Avena_nucl_with_EST.fasta
8143 sequences; 4,702,463 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN814754.1|CN814754 HRO4502_B05_C10ZS5 Lib AA071E1X Aven... 171 8e-044
gb|CN815590.1|CN815590 HRO4513_D03_G05ZS5 Lib AA071E1X Aven... 171 8e-044
gb|CN815713.1|CN815713 HRO4514_F11_K22ZS5 Lib AA071E1X Aven... 171 8e-044
gb|CN820626.1|CN820626 HRO4415_E12_J23ZS5 Lib AA069E1X Aven... 171 8e-044
gb|CN815879.1|CN815879 HRO4511_E04_J07ZS5 Lib AA071E1X Aven... 171 1e-043
gb|CN820836.1|CN820836 HRO4420_D09_H18ZS5 Lib AA069E1X Aven... 171 1e-043
gb|CN817171.1|CN817171 HRO4459_H06_O11ZS5 Lib AA070E1X Aven... 169 4e-043
gb|CN817491.1|CN817491 HRO4466_C08_F16ZS5 Lib AA070E1X Aven... 162 5e-041
gb|CN818391.1|CN818391 HRO4469_D07_H13ZS5 Lib AA070E1X Aven... 136 3e-033
gb|CN817141.1|CN817141 HRO4528_F11_L22ZS5 Lib AA071E1X Aven... 128 1e-030
>gb|CN814754.1|CN814754 HRO4502_B05_C10ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4502_B05_C10, mRNA sequence
Length = 838
Score = 171 bits (369), Expect = 8e-044
Identities = 67/75 (89%), Positives = 70/75 (93%)
Frame = +3 / +2
Query: 3 EQKKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDD 182
+QKK+KNPNYQGKWKA MI NPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNI+ITDD
Sbjct: 284 KQKKMKNPNYQGKWKAHMIANPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNILITDD 463
Query: 183 PALAKTFAEETWGKH 227
ALAK FAEETW KH
Sbjct: 464 AALAKAFAEETWAKH 508
Score = 132 bits (282), Expect = 8e-032
Identities = 60/88 (68%), Positives = 62/88 (70%)
Frame = -3 / -3
Query: 270 SFSQPHRKQSSLPPCACPMSPLQKSWPTQDHQ***CCQTKCLI*PATAQCQCISGCQMHK 91
SFSQP +KQ S P P S LQ WP Q Q** CCQTK *PATAQ QC SGCQ H+
Sbjct: 551 SFSQPRQKQPSQHPYVWPRSLLQMPWPRQHRQ**ECCQTKFPT*PATAQFQCTSGCQKHR 372
Query: 90 CTDHP*NLGCQS*VPSIYPGS*GS*FSF 7
C DHP*NLG QS VPSIYP S*GS FSF
Sbjct: 371 CKDHP*NLGWQSYVPSIYPDS*GSSFSF 288
Score = 123 bits (264), Expect = 2e-029
Identities = 54/81 (66%), Positives = 62/81 (76%)
Frame = +2 / +1
Query: 8 KENQEP*LPG*MEGTYD*QPRFQG*SVHLCI*QPEIHWH*AVAG*IRHFV*QXXXXX*SC 187
KEN+EP*L G*MEGTYD QPRFQG*S+HLC *QPE+HW+*AVAG*+ +FV*Q C
Sbjct: 289 KENEEP*LSG*MEGTYDCQPRFQG*SLHLCF*QPEVHWN*AVAG*VGNFV*QHSHH*RCC 468
Query: 188 VGQDFCRGDMGQAQGGREDCF 250
+GQ CR D+GQ G E CF
Sbjct: 469 LGQGICRRDLGQT*GC*EGCF 531
Score = 112 bits (240), Expect = 5e-026
Identities = 52/72 (72%), Positives = 59/72 (81%)
Frame = +1 / +3
Query: 4 NKRKSRTLTTRVNGRHL*LTTQISRMIRTFMHLTA*NTLALSCGRLNQALCLTTSSSLMI 183
+KRK RTLT RVNGRH+*L TQISRMI T M LTA*+TL LSCGRL++ LCLTT SSL +
Sbjct: 285 SKRK*RTLTIRVNGRHI*LPTQISRMILTSMLLTA*STLELSCGRLSRELCLTTFSSLTM 464
Query: 184 LRWPRLLQRRHG 219
L WPR LQ+R G
Sbjct: 465 LPWPRHLQKRPG 500
Score = 111 bits (238), Expect = 1e-025
Identities = 51/75 (68%), Positives = 52/75 (69%)
Frame = -2 / -2
Query: 229 LCLPHVSSAKVLANAGSSVMMMLSNKVPDLTCHSSMPMYFRLSNA*MYXXXXXXXXXXXG 50
LCL VSSA LA A SSVM MLSNKVPDLTCHSS+PMYFRLS A*M
Sbjct: 510 LCLAQVSSANALAKAASSVMRMLSNKVPDLTCHSSIPMYFRLSKA*M*GSSLKSGLAIIC 331
Query: 49 AFHLPW*LGFLIFFC 5
AFHLP *LGF IFFC
Sbjct: 330 AFHLP**LGFFIFFC 286
Score = 110 bits (235), Expect = 2e-025
Identities = 47/63 (74%), Positives = 54/63 (85%)
Frame = -1 / -1
Query: 194 GQRRIISDDDVVKQSA*FNLPQLNANVFQAVKCINVRIILEIWVVNHRCLPFTLVVRVLD 15
GQ I+SD++VVKQS+ NLPQLN+NV QAVK I+VRIILEIWV NH CLPFTL+VRVL
Sbjct: 475 GQGSIVSDENVVKQSSRLNLPQLNSNVLQAVKSIDVRIILEIWVGNHMCLPFTLIVRVLH 296
Query: 14 FLL 6
FLL
Sbjct: 295 FLL 287
>gb|CN815590.1|CN815590 HRO4513_D03_G05ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4513_D03_G05, mRNA sequence
Length = 636
Score = 171 bits (369), Expect = 8e-044
Identities = 67/75 (89%), Positives = 70/75 (93%)
Frame = +3 / +3
Query: 3 EQKKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDD 182
+QKK+KNPNYQGKWKA MI NPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNI+ITDD
Sbjct: 63 KQKKMKNPNYQGKWKAHMIANPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNILITDD 242
Query: 183 PALAKTFAEETWGKH 227
ALAK FAEETW KH
Sbjct: 243 AALAKAFAEETWAKH 287
Score = 132 bits (282), Expect = 8e-032
Identities = 60/88 (68%), Positives = 62/88 (70%)
Frame = -3 / -1
Query: 270 SFSQPHRKQSSLPPCACPMSPLQKSWPTQDHQ***CCQTKCLI*PATAQCQCISGCQMHK 91
SFSQP +KQ S P P S LQ WP Q Q** CCQTK *PATAQ QC SGCQ H+
Sbjct: 330 SFSQPRQKQPSQHPYVWPRSLLQMPWPRQHRQ**ECCQTKFPT*PATAQFQCTSGCQKHR 151
Query: 90 CTDHP*NLGCQS*VPSIYPGS*GS*FSF 7
C DHP*NLG QS VPSIYP S*GS FSF
Sbjct: 150 CKDHP*NLGWQSYVPSIYPDS*GSSFSF 67
Score = 123 bits (264), Expect = 2e-029
Identities = 54/81 (66%), Positives = 62/81 (76%)
Frame = +2 / +2
Query: 8 KENQEP*LPG*MEGTYD*QPRFQG*SVHLCI*QPEIHWH*AVAG*IRHFV*QXXXXX*SC 187
KEN+EP*L G*MEGTYD QPRFQG*S+HLC *QPE+HW+*AVAG*+ +FV*Q C
Sbjct: 68 KENEEP*LSG*MEGTYDCQPRFQG*SLHLCF*QPEVHWN*AVAG*VGNFV*QHSHH*RCC 247
Query: 188 VGQDFCRGDMGQAQGGREDCF 250
+GQ CR D+GQ G E CF
Sbjct: 248 LGQGICRRDLGQT*GC*EGCF 310
Score = 112 bits (240), Expect = 5e-026
Identities = 52/72 (72%), Positives = 59/72 (81%)
Frame = +1 / +1
Query: 4 NKRKSRTLTTRVNGRHL*LTTQISRMIRTFMHLTA*NTLALSCGRLNQALCLTTSSSLMI 183
+KRK RTLT RVNGRH+*L TQISRMI T M LTA*+TL LSCGRL++ LCLTT SSL +
Sbjct: 64 SKRK*RTLTIRVNGRHI*LPTQISRMILTSMLLTA*STLELSCGRLSRELCLTTFSSLTM 243
Query: 184 LRWPRLLQRRHG 219
L WPR LQ+R G
Sbjct: 244 LPWPRHLQKRPG 279
Score = 111 bits (238), Expect = 1e-025
Identities = 51/75 (68%), Positives = 52/75 (69%)
Frame = -2 / -3
Query: 229 LCLPHVSSAKVLANAGSSVMMMLSNKVPDLTCHSSMPMYFRLSNA*MYXXXXXXXXXXXG 50
LCL VSSA LA A SSVM MLSNKVPDLTCHSS+PMYFRLS A*M
Sbjct: 289 LCLAQVSSANALAKAASSVMRMLSNKVPDLTCHSSIPMYFRLSKA*M*GSSLKSGLAIIC 110
Query: 49 AFHLPW*LGFLIFFC 5
AFHLP *LGF IFFC
Sbjct: 109 AFHLP**LGFFIFFC 65
Score = 110 bits (235), Expect = 2e-025
Identities = 47/63 (74%), Positives = 54/63 (85%)
Frame = -1 / -2
Query: 194 GQRRIISDDDVVKQSA*FNLPQLNANVFQAVKCINVRIILEIWVVNHRCLPFTLVVRVLD 15
GQ I+SD++VVKQS+ NLPQLN+NV QAVK I+VRIILEIWV NH CLPFTL+VRVL
Sbjct: 254 GQGSIVSDENVVKQSSRLNLPQLNSNVLQAVKSIDVRIILEIWVGNHMCLPFTLIVRVLH 75
Query: 14 FLL 6
FLL
Sbjct: 74 FLL 66
>gb|CN815713.1|CN815713 HRO4514_F11_K22ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4514_F11_K22, mRNA sequence
Length = 753
Score = 171 bits (369), Expect = 8e-044
Identities = 67/75 (89%), Positives = 70/75 (93%)
Frame = +3 / +3
Query: 3 EQKKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDD 182
+QKK+KNPNYQGKWKA MI NPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNI+ITDD
Sbjct: 216 KQKKMKNPNYQGKWKAHMIANPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNILITDD 395
Query: 183 PALAKTFAEETWGKH 227
ALAK FAEETW KH
Sbjct: 396 AALAKAFAEETWAKH 440
Score = 132 bits (282), Expect = 8e-032
Identities = 60/88 (68%), Positives = 62/88 (70%)
Frame = -3 / -1
Query: 270 SFSQPHRKQSSLPPCACPMSPLQKSWPTQDHQ***CCQTKCLI*PATAQCQCISGCQMHK 91
SFSQP +KQ S P P S LQ WP Q Q** CCQTK *PATAQ QC SGCQ H+
Sbjct: 483 SFSQPRQKQPSQHPYVWPRSLLQMPWPRQHRQ**ECCQTKFPT*PATAQFQCTSGCQKHR 304
Query: 90 CTDHP*NLGCQS*VPSIYPGS*GS*FSF 7
C DHP*NLG QS VPSIYP S*GS FSF
Sbjct: 303 CKDHP*NLGWQSYVPSIYPDS*GSSFSF 220
Score = 123 bits (264), Expect = 2e-029
Identities = 54/81 (66%), Positives = 62/81 (76%)
Frame = +2 / +2
Query: 8 KENQEP*LPG*MEGTYD*QPRFQG*SVHLCI*QPEIHWH*AVAG*IRHFV*QXXXXX*SC 187
KEN+EP*L G*MEGTYD QPRFQG*S+HLC *QPE+HW+*AVAG*+ +FV*Q C
Sbjct: 221 KENEEP*LSG*MEGTYDCQPRFQG*SLHLCF*QPEVHWN*AVAG*VGNFV*QHSHH*RCC 400
Query: 188 VGQDFCRGDMGQAQGGREDCF 250
+GQ CR D+GQ G E CF
Sbjct: 401 LGQGICRRDLGQT*GC*EGCF 463
Score = 112 bits (240), Expect = 5e-026
Identities = 52/72 (72%), Positives = 59/72 (81%)
Frame = +1 / +1
Query: 4 NKRKSRTLTTRVNGRHL*LTTQISRMIRTFMHLTA*NTLALSCGRLNQALCLTTSSSLMI 183
+KRK RTLT RVNGRH+*L TQISRMI T M LTA*+TL LSCGRL++ LCLTT SSL +
Sbjct: 217 SKRK*RTLTIRVNGRHI*LPTQISRMILTSMLLTA*STLELSCGRLSRELCLTTFSSLTM 396
Query: 184 LRWPRLLQRRHG 219
L WPR LQ+R G
Sbjct: 397 LPWPRHLQKRPG 432
Score = 111 bits (238), Expect = 1e-025
Identities = 51/75 (68%), Positives = 52/75 (69%)
Frame = -2 / -3
Query: 229 LCLPHVSSAKVLANAGSSVMMMLSNKVPDLTCHSSMPMYFRLSNA*MYXXXXXXXXXXXG 50
LCL VSSA LA A SSVM MLSNKVPDLTCHSS+PMYFRLS A*M
Sbjct: 442 LCLAQVSSANALAKAASSVMRMLSNKVPDLTCHSSIPMYFRLSKA*M*GSSLKSGLAIIC 263
Query: 49 AFHLPW*LGFLIFFC 5
AFHLP *LGF IFFC
Sbjct: 262 AFHLP**LGFFIFFC 218
Score = 110 bits (235), Expect = 2e-025
Identities = 47/63 (74%), Positives = 54/63 (85%)
Frame = -1 / -2
Query: 194 GQRRIISDDDVVKQSA*FNLPQLNANVFQAVKCINVRIILEIWVVNHRCLPFTLVVRVLD 15
GQ I+SD++VVKQS+ NLPQLN+NV QAVK I+VRIILEIWV NH CLPFTL+VRVL
Sbjct: 407 GQGSIVSDENVVKQSSRLNLPQLNSNVLQAVKSIDVRIILEIWVGNHMCLPFTLIVRVLH 228
Query: 14 FLL 6
FLL
Sbjct: 227 FLL 219
>gb|CN820626.1|CN820626 HRO4415_E12_J23ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4415_E12_J23, mRNA
sequence
Length = 807
Score = 171 bits (369), Expect = 8e-044
Identities = 67/75 (89%), Positives = 70/75 (93%)
Frame = +3 / -3
Query: 3 EQKKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDD 182
+QKK+KNPNYQGKWKA MI NPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNI+ITDD
Sbjct: 589 KQKKMKNPNYQGKWKAHMIANPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNILITDD 410
Query: 183 PALAKTFAEETWGKH 227
ALAK FAEETW KH
Sbjct: 409 AALAKAFAEETWAKH 365
Score = 132 bits (282), Expect = 8e-032
Identities = 60/88 (68%), Positives = 62/88 (70%)
Frame = -3 / +1
Query: 270 SFSQPHRKQSSLPPCACPMSPLQKSWPTQDHQ***CCQTKCLI*PATAQCQCISGCQMHK 91
SFSQP +KQ S P P S LQ WP Q Q** CCQTK *PATAQ QC SGCQ H+
Sbjct: 322 SFSQPRQKQPSQHPYVWPRSLLQMPWPRQHRQ**ECCQTKFPT*PATAQFQCTSGCQKHR 501
Query: 90 CTDHP*NLGCQS*VPSIYPGS*GS*FSF 7
C DHP*NLG QS VPSIYP S*GS FSF
Sbjct: 502 CKDHP*NLGWQSYVPSIYPDS*GSSFSF 585
Score = 123 bits (264), Expect = 2e-029
Identities = 54/81 (66%), Positives = 62/81 (76%)
Frame = +2 / -2
Query: 8 KENQEP*LPG*MEGTYD*QPRFQG*SVHLCI*QPEIHWH*AVAG*IRHFV*QXXXXX*SC 187
KEN+EP*L G*MEGTYD QPRFQG*S+HLC *QPE+HW+*AVAG*+ +FV*Q C
Sbjct: 584 KENEEP*LSG*MEGTYDCQPRFQG*SLHLCF*QPEVHWN*AVAG*VGNFV*QHSHH*RCC 405
Query: 188 VGQDFCRGDMGQAQGGREDCF 250
+GQ CR D+GQ G E CF
Sbjct: 404 LGQGICRRDLGQT*GC*EGCF 342
Score = 112 bits (240), Expect = 5e-026
Identities = 52/72 (72%), Positives = 59/72 (81%)
Frame = +1 / -1
Query: 4 NKRKSRTLTTRVNGRHL*LTTQISRMIRTFMHLTA*NTLALSCGRLNQALCLTTSSSLMI 183
+KRK RTLT RVNGRH+*L TQISRMI T M LTA*+TL LSCGRL++ LCLTT SSL +
Sbjct: 588 SKRK*RTLTIRVNGRHI*LPTQISRMILTSMLLTA*STLELSCGRLSRELCLTTFSSLTM 409
Query: 184 LRWPRLLQRRHG 219
L WPR LQ+R G
Sbjct: 408 LPWPRHLQKRPG 373
Score = 111 bits (238), Expect = 1e-025
Identities = 51/75 (68%), Positives = 52/75 (69%)
Frame = -2 / +3
Query: 229 LCLPHVSSAKVLANAGSSVMMMLSNKVPDLTCHSSMPMYFRLSNA*MYXXXXXXXXXXXG 50
LCL VSSA LA A SSVM MLSNKVPDLTCHSS+PMYFRLS A*M
Sbjct: 363 LCLAQVSSANALAKAASSVMRMLSNKVPDLTCHSSIPMYFRLSKA*M*GSSLKSGLAIIC 542
Query: 49 AFHLPW*LGFLIFFC 5
AFHLP *LGF IFFC
Sbjct: 543 AFHLP**LGFFIFFC 587
Score = 110 bits (235), Expect = 2e-025
Identities = 47/63 (74%), Positives = 54/63 (85%)
Frame = -1 / +2
Query: 194 GQRRIISDDDVVKQSA*FNLPQLNANVFQAVKCINVRIILEIWVVNHRCLPFTLVVRVLD 15
GQ I+SD++VVKQS+ NLPQLN+NV QAVK I+VRIILEIWV NH CLPFTL+VRVL
Sbjct: 398 GQGSIVSDENVVKQSSRLNLPQLNSNVLQAVKSIDVRIILEIWVGNHMCLPFTLIVRVLH 577
Query: 14 FLL 6
FLL
Sbjct: 578 FLL 586
>gb|CN815879.1|CN815879 HRO4511_E04_J07ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4511_E04_J07, mRNA sequence
Length = 779
Score = 171 bits (368), Expect = 1e-043
Identities = 64/74 (86%), Positives = 71/74 (95%)
Frame = +3 / +2
Query: 6 QKKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDP 185
QKKIKNPN++GKWKAP+IDNP++KDDPYIYAFDSLK+IGIELWQVKSGTLFDNI+ITDDP
Sbjct: 227 QKKIKNPNFKGKWKAPLIDNPEYKDDPYIYAFDSLKHIGIELWQVKSGTLFDNILITDDP 406
Query: 186 ALAKTFAEETWGKH 227
AK FAEETWGKH
Sbjct: 407 EYAKKFAEETWGKH 448
Score = 115 bits (246), Expect = 8e-027
Identities = 51/88 (57%), Positives = 58/88 (65%)
Frame = -3 / -1
Query: 270 SFSQPHRKQSSLPPCACPMSPLQKSWPTQDHQ***CCQTKCLI*PATAQCQCISGCQMHK 91
S SQP ++Q S ACP SPLQ SW TQ H * CC+T+ I*PAT QC+C S CQ +
Sbjct: 491 SSSQPRQRQPSQRLYACPRSPLQTSWRTQGHP*SGCCRTEFPI*PATTQCRCASSCQKRR 312
Query: 90 CTDHP*NLGCQS*VPSIYPGS*GS*FSF 7
C DHP LGC+S PS P S GS*FSF
Sbjct: 311 CKDHPCTLGCRSKAPSTCP*SSGS*FSF 228
Score = 102 bits (217), Expect = 8e-023
Identities = 47/74 (63%), Positives = 52/74 (70%)
Frame = -2 / -3
Query: 229 LCLPHVSSAKVLANAGSSVMMMLSNKVPDLTCHSSMPMYFRLSNA*MYXXXXXXXXXXXG 50
LCLP VSSA LA +GSSV+ MLSN+VPDLTCH+SMPM F+LS A*M G
Sbjct: 450 LCLPQVSSANFLAYSGSSVIRMLSNRVPDLTCHNSMPMCFKLSKA*M*GSSLYSGLSIKG 271
Query: 49 AFHLPW*LGFLIFF 8
AFHLP GFLIFF
Sbjct: 270 AFHLPLKFGFLIFF 229
Score = 97.7 bits (207), Expect = 2e-021
Identities = 49/73 (67%), Positives = 54/73 (73%)
Frame = +1 / +3
Query: 7 KRKSRTLTTRVNGRHL*LTTQISRMIRTFMHLTA*NTLALSCGRLNQALCLTTSSSLMIL 186
KRKSRT T+R +GR L* TTQ +RMI T LTA*+T ALSCGRLN+ LC TTS S M L
Sbjct: 228 KRKSRTRTSRASGRRL*STTQSTRMILTSTLLTA*STSALSCGRLNRELCSTTS*SRMTL 407
Query: 187 RWPRLLQRRHGAS 225
PR LQRR GAS
Sbjct: 408 STPRSLQRRPGAS 446
>gb|CN820836.1|CN820836 HRO4420_D09_H18ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4420_D09_H18, mRNA
sequence
Length = 602
Score = 171 bits (368), Expect = 1e-043
Identities = 64/74 (86%), Positives = 71/74 (95%)
Frame = +3 / +3
Query: 6 QKKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDP 185
QKKIKNPN++GKWKAP+IDNP++KDDPYIYAFDSLK+IGIELWQVKSGTLFDNI+ITDDP
Sbjct: 234 QKKIKNPNFKGKWKAPLIDNPEYKDDPYIYAFDSLKHIGIELWQVKSGTLFDNILITDDP 413
Query: 186 ALAKTFAEETWGKH 227
AK FAEETWGKH
Sbjct: 414 EYAKKFAEETWGKH 455
Score = 108 bits (230), Expect = 1e-024
Identities = 49/89 (55%), Positives = 58/89 (65%)
Frame = -3 / -3
Query: 270 SFSQPHRKQSSLPPCACPMSPLQKSWPTQDHQ***CCQTKCLI*PATAQCQCISGCQMHK 91
S S+P ++Q S A P SPLQ SW TQ H * CC+T+ I*PAT +C+C S CQ +
Sbjct: 498 SSSRPRQRQPSQHLYAFPRSPLQTSWHTQGHP*SGCCRTEFQI*PATTRCRCASSCQKRR 319
Query: 90 CTDHP*NLGCQS*VPSIYPGS*GS*FSFV 4
C DHP LGC+S PS P S GS*FSFV
Sbjct: 318 CKDHPCTLGCRSKEPSTCP*SSGS*FSFV 232
Score = 104 bits (222), Expect = 2e-023
Identities = 47/75 (62%), Positives = 52/75 (69%)
Frame = -2 / -2
Query: 229 LCLPHVSSAKVLANAGSSVMMMLSNKVPDLTCHSSMPMYFRLSNA*MYXXXXXXXXXXXG 50
LC P VSSA LA +GSSV+ MLSN+VPDLTCH+SMPM F+LS A*M G
Sbjct: 457 LCFPQVSSANFLAYSGSSVIRMLSNRVPDLTCHNSMPMCFKLSKA*M*GSSLYSGLSIKG 278
Query: 49 AFHLPW*LGFLIFFC 5
AFHLP GFLIFFC
Sbjct: 277 AFHLPLKFGFLIFFC 233
>gb|CN817171.1|CN817171 HRO4459_H06_O11ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4459_H06_O11, mRNA sequence
Length = 856
Score = 169 bits (364), Expect = 4e-043
Identities = 66/75 (88%), Positives = 69/75 (92%)
Frame = +3 / +2
Query: 3 EQKKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDD 182
+QKK+KNPNYQGKWKA MI NPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNI+ITDD
Sbjct: 362 KQKKMKNPNYQGKWKAHMIANPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNILITDD 541
Query: 183 PALAKTFAEETWGKH 227
LAK FAEETW KH
Sbjct: 542 APLAKAFAEETWAKH 586
Score = 130 bits (279), Expect = 2e-031
Identities = 59/88 (67%), Positives = 62/88 (70%)
Frame = -3 / -3
Query: 270 SFSQPHRKQSSLPPCACPMSPLQKSWPTQDHQ***CCQTKCLI*PATAQCQCISGCQMHK 91
SFSQP +KQ S P P S LQ WP + Q** CCQTK *PATAQ QC SGCQ H+
Sbjct: 629 SFSQPRQKQPSQHPYVWPRSLLQMPWPREHRQ**ECCQTKFPT*PATAQFQCTSGCQKHR 450
Query: 90 CTDHP*NLGCQS*VPSIYPGS*GS*FSF 7
C DHP*NLG QS VPSIYP S*GS FSF
Sbjct: 449 CKDHP*NLGWQSYVPSIYPDS*GSSFSF 366
Score = 119 bits (254), Expect = 6e-028
Identities = 53/81 (65%), Positives = 61/81 (75%)
Frame = +2 / +1
Query: 8 KENQEP*LPG*MEGTYD*QPRFQG*SVHLCI*QPEIHWH*AVAG*IRHFV*QXXXXX*SC 187
KEN+EP*L G*MEGTYD QPRFQG*S+HLC *QPE+HW+*AVAG*+ +FV*Q
Sbjct: 367 KENEEP*LSG*MEGTYDCQPRFQG*SLHLCF*QPEVHWN*AVAG*VGNFV*QHSHH*RCS 546
Query: 188 VGQDFCRGDMGQAQGGREDCF 250
+GQ CR D+GQ G E CF
Sbjct: 547 LGQGICRRDLGQT*GC*EGCF 609
Score = 112 bits (240), Expect = 5e-026
Identities = 52/72 (72%), Positives = 59/72 (81%)
Frame = +1 / +3
Query: 4 NKRKSRTLTTRVNGRHL*LTTQISRMIRTFMHLTA*NTLALSCGRLNQALCLTTSSSLMI 183
+KRK RTLT RVNGRH+*L TQISRMI T M LTA*+TL LSCGRL++ LCLTT SSL +
Sbjct: 363 SKRK*RTLTIRVNGRHI*LPTQISRMILTSMLLTA*STLELSCGRLSRELCLTTFSSLTM 542
Query: 184 LRWPRLLQRRHG 219
L WPR LQ+R G
Sbjct: 543 LPWPRHLQKRPG 578
Score = 110 bits (235), Expect = 2e-025
Identities = 47/63 (74%), Positives = 54/63 (85%)
Frame = -1 / -1
Query: 194 GQRRIISDDDVVKQSA*FNLPQLNANVFQAVKCINVRIILEIWVVNHRCLPFTLVVRVLD 15
GQ I+SD++VVKQS+ NLPQLN+NV QAVK I+VRIILEIWV NH CLPFTL+VRVL
Sbjct: 553 GQGSIVSDENVVKQSSRLNLPQLNSNVLQAVKSIDVRIILEIWVGNHMCLPFTLIVRVLH 374
Query: 14 FLL 6
FLL
Sbjct: 373 FLL 365
Score = 110 bits (234), Expect = 3e-025
Identities = 50/75 (66%), Positives = 51/75 (68%)
Frame = -2 / -2
Query: 229 LCLPHVSSAKVLANAGSSVMMMLSNKVPDLTCHSSMPMYFRLSNA*MYXXXXXXXXXXXG 50
LCL VSSA LA SSVM MLSNKVPDLTCHSS+PMYFRLS A*M
Sbjct: 588 LCLAQVSSANALAKGASSVMRMLSNKVPDLTCHSSIPMYFRLSKA*M*GSSLKSGLAIIC 409
Query: 49 AFHLPW*LGFLIFFC 5
AFHLP *LGF IFFC
Sbjct: 408 AFHLP**LGFFIFFC 364
>gb|CN817491.1|CN817491 HRO4466_C08_F16ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4466_C08_F16, mRNA sequence
Length = 598
Score = 162 bits (349), Expect = 5e-041
Identities = 63/74 (85%), Positives = 68/74 (91%)
Frame = +3 / +1
Query: 6 QKKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDP 185
++++K PNYQGKWKA MI NPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNI+ITDD
Sbjct: 7 EEEMKYPNYQGKWKAHMIANPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNILITDDA 186
Query: 186 ALAKTFAEETWGKH 227
ALAK FAEETW KH
Sbjct: 187 ALAKAFAEETWAKH 228
Score = 126 bits (269), Expect = 5e-030
Identities = 57/86 (66%), Positives = 60/86 (69%)
Frame = -3 / -1
Query: 270 SFSQPHRKQSSLPPCACPMSPLQKSWPTQDHQ***CCQTKCLI*PATAQCQCISGCQMHK 91
SFSQP +KQ S P P S LQ WP Q Q** CCQTK *PATAQ QC SGCQ H+
Sbjct: 271 SFSQPRQKQPSQHPYVWPRSLLQMPWPRQHRQ**ECCQTKFPT*PATAQFQCTSGCQKHR 92
Query: 90 CTDHP*NLGCQS*VPSIYPGS*GS*F 13
C DHP*NLG QS VPSIYP S*G+ F
Sbjct: 91 CKDHP*NLGWQSYVPSIYPDS*GTSF 14
Score = 116 bits (247), Expect = 5e-027
Identities = 51/79 (64%), Positives = 59/79 (74%)
Frame = +2 / +3
Query: 14 NQEP*LPG*MEGTYD*QPRFQG*SVHLCI*QPEIHWH*AVAG*IRHFV*QXXXXX*SCVG 193
N+ P*L G*MEGTYD QPRFQG*S+HLC *QPE+HW+*AVAG*+ +FV*Q C+G
Sbjct: 15 NEVP*LSG*MEGTYDCQPRFQG*SLHLCF*QPEVHWN*AVAG*VGNFV*QHSHH*RCCLG 194
Query: 194 QDFCRGDMGQAQGGREDCF 250
Q CR D+GQ G E CF
Sbjct: 195 QGICRRDLGQT*GC*EGCF 251
Score = 108 bits (231), Expect = 9e-025
Identities = 46/63 (73%), Positives = 53/63 (84%)
Frame = -1 / -2
Query: 194 GQRRIISDDDVVKQSA*FNLPQLNANVFQAVKCINVRIILEIWVVNHRCLPFTLVVRVLD 15
GQ I+SD++VVKQS+ NLPQLN+NV QAVK I+VRIILEIWV NH CLPFTL+VRVL
Sbjct: 195 GQGSIVSDENVVKQSSRLNLPQLNSNVLQAVKSIDVRIILEIWVGNHMCLPFTLIVRVLH 16
Query: 14 FLL 6
F L
Sbjct: 15 FFL 7
Score = 106 bits (227), Expect = 3e-024
Identities = 49/71 (69%), Positives = 57/71 (80%)
Frame = +1 / +2
Query: 7 KRKSRTLTTRVNGRHL*LTTQISRMIRTFMHLTA*NTLALSCGRLNQALCLTTSSSLMIL 186
++K TLT RVNGRH+*L TQISRMI T M LTA*+TL LSCGRL++ LCLTT SSL +L
Sbjct: 8 RKK*STLTIRVNGRHI*LPTQISRMILTSMLLTA*STLELSCGRLSRELCLTTFSSLTML 187
Query: 187 RWPRLLQRRHG 219
WPR LQ+R G
Sbjct: 188 PWPRHLQKRPG 220
Score = 100 bits (214), Expect = 2e-022
Identities = 47/72 (65%), Positives = 49/72 (68%)
Frame = -2 / -3
Query: 229 LCLPHVSSAKVLANAGSSVMMMLSNKVPDLTCHSSMPMYFRLSNA*MYXXXXXXXXXXXG 50
LCL VSSA LA A SSVM MLSNKVPDLTCHSS+PMYFRLS A*M
Sbjct: 230 LCLAQVSSANALAKAASSVMRMLSNKVPDLTCHSSIPMYFRLSKA*M*GSSLKSGLAIIC 51
Query: 49 AFHLPW*LGFLI 14
AFHLP *LG+ I
Sbjct: 50 AFHLP**LGYFI 15
>gb|CN818391.1|CN818391 HRO4469_D07_H13ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4469_D07_H13, mRNA sequence
Length = 735
Score = 136 bits (292), Expect = 3e-033
Identities = 50/73 (68%), Positives = 61/73 (83%)
Frame = +3 / +3
Query: 3 EQKKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDD 182
++KKIKNPNY+GKWK P IDNP+F+DDP +Y LKYIGIE+WQVK+G++FDNI+I DD
Sbjct: 168 KRKKIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEVWQVKAGSVFDNILICDD 347
Query: 183 PALAKTFAEETWG 221
P AK AEETWG
Sbjct: 348 PEYAKRAAEETWG 386
>gb|CN817141.1|CN817141 HRO4528_F11_L22ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4528_F11_L22, mRNA sequence
Length = 594
Score = 128 bits (274), Expect = 1e-030
Identities = 51/73 (69%), Positives = 58/73 (79%)
Frame = +3 / +2
Query: 6 QKKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDP 185
++K + P+Y GKWKA MI NPD DDPYIYAF SLK IGI+LWQ K GTL DNI+I DD
Sbjct: 347 KRKSRTPSYLGKWKASMIANPDLTDDPYIYAFYSLKCIGIQLWQDKPGTLIDNILIPDDA 526
Query: 186 ALAKTFAEETWGK 224
ALAKTFA+ETW K
Sbjct: 527 ALAKTFAKETWAK 565
Score = 94.5 bits (200), Expect(2) = 9e-022
Identities = 41/66 (62%), Positives = 45/66 (68%)
Frame = -3 / -2
Query: 219 PMSPLQKSWPTQDHQ***CCQTKCLI*PATAQCQCISGCQMHKCTDHP*NLGCQS*VPSI 40
P S Q SWP Q HQ * CCQ+K L PATA+ QC SGC+ H+C DHP* LG QS* PSI
Sbjct: 560 PRSLWQMSWPRQHHQG*ECCQSKFLAYPATAESQCTSGCRKHRCKDHP*GLGWQS*TPSI 381
Query: 39 YPGS*G 22
GS G
Sbjct: 380 SRGSLG 363
Score = 23.5 bits (45), Expect(2) = 9e-022
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2 / -2
Query: 28 LGFLIFFC 5
LGFLIFFC
Sbjct: 368 LGFLIFFC 345
Database: Avena_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:15 PM
Number of letters in database: 4,702,463
Number of sequences in database: 8143
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 6,680,506
Number of Sequences: 8143
Number of extensions: 79100
Number of successful extensions: 917
Number of sequences better than 1.0e-020: 11
length of database: 1,567,487
effective HSP length: 43
effective length of database: 1,217,338
effective search space used: 241032924
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)