TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.355
(842 letters)
Database: Avena_nucl_with_EST.fasta
8143 sequences; 4,702,463 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN821624.1|CN821624 HRO4408_D06_H12ZS5 Lib AA069E1X Aven... 187 2e-048
gb|CN815219.1|CN815219 HRO4507_C01_F01ZS5 Lib AA071E1X Aven... 185 1e-047
gb|CN815929.1|CN815929 HRO4515_A08_B15ZS5 Lib AA071E1X Aven... 183 3e-047
gb|CN817060.1|CN817060 HRO4527_G09_N17ZS5 Lib AA071E1X Aven... 183 3e-047
gb|CN820741.1|CN820741 HRO4414_B07_C14ZS5 Lib AA069E1X Aven... 183 3e-047
gb|CN816090.1|CN816090 HRO4516_H02_P04ZS5 Lib AA071E1X Aven... 180 3e-046
gb|CN817108.1|CN817108 HRO4528_C10_F20ZS5 Lib AA071E1X Aven... 136 6e-033
gb|CN815430.1|CN815430 HRO4509_F01_K01ZS5 Lib AA071E1X Aven... 101 2e-022
>gb|CN821624.1|CN821624 HRO4408_D06_H12ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4408_D06_H12, mRNA
sequence
Length = 415
Score = 187 bits (403), Expect = 2e-048
Identities = 87/105 (82%), Positives = 89/105 (84%)
Frame = -2 / +2
Query: 595 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSR 416
SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF ARYNKKPTITSR
Sbjct: 38 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITSR 217
Query: 415 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*IAAARSDGSVSF 281
EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* AA + V+F
Sbjct: 218 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*AAAQQLVD*VAF 352
Score = 86.3 bits (182), Expect(2) = 2e-030
Identities = 39/42 (92%), Positives = 40/42 (95%)
Frame = +3 / -2
Query: 309 AAI*EEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVG 434
AA *E+VNLVTALVPSETACLASSPGRTRRTEV ISREVMVG
Sbjct: 324 AAA*EDVNLVTALVPSETACLASSPGRTRRTEVCISREVMVG 199
Score = 76.2 bits (160), Expect(2) = 3e-023
Identities = 33/47 (70%), Positives = 36/47 (76%)
Frame = -1 / +1
Query: 458 QARPLQQEAHHNLPGDPDFGAPRPSWRARQARRLRGHQGRYQVYFLL 318
QAR LQQEAHH+LPGD D PRP RARQAR L GHQG +QV+ LL
Sbjct: 175 QARSLQQEAHHHLPGDTDLCPPRPPRRARQARCL*GHQGCHQVHILL 315
Score = 71.2 bits (149), Expect(2) = 4e-022
Identities = 27/51 (52%), Positives = 30/51 (58%)
Frame = +1 / -3
Query: 388 GRGAPKSGSPGRLWWASCCSGRAWRPRQPAXXXXXXXXXX*WTWPWTRYQC 540
GRG +S SPGR WWASCCS RAW+ Q A *WTWPW +C
Sbjct: 245 GRGGQRSVSPGR*WWASCCSERAWQTPQQASQRCR**RSS*WTWPWRICRC 93
Score = 61.1 bits (127), Expect(2) = 2e-030
Identities = 24/29 (82%), Positives = 26/29 (89%)
Frame = +2 / -1
Query: 485 DVVDEGVHDGHGLGRDTNVRVHLLEHLED 571
DVV+EGVHDGHGLG +VRVHLLEHLED
Sbjct: 148 DVVNEGVHDGHGLGGYADVRVHLLEHLED 62
Score = 48.3 bits (99), Expect(2) = 4e-022
Identities = 23/45 (51%), Positives = 28/45 (62%)
Frame = +2 / -1
Query: 269 KSTRKRNRAVAPCGGDLRGSKLGNGLGALGDGVLGELARKDEAHR 403
+ TR+ N LRG +LG+ LGAL D VLGELA +DEA R
Sbjct: 364 QQTRESNLIYQLLRSSLRGCELGDSLGALRDSVLGELAGEDEADR 230
Score = 46.9 bits (96), Expect(2) = 3e-023
Identities = 17/22 (77%), Positives = 21/22 (95%)
Frame = -1 / +1
Query: 584 VQDLHLQGAQAGAPGHWYLVQG 519
+QDLHLQGAQAGAPGH +++QG
Sbjct: 49 LQDLHLQGAQAGAPGHRHILQG 114
>gb|CN815219.1|CN815219 HRO4507_C01_F01ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4507_C01_F01, mRNA sequence
Length = 365
Score = 185 bits (398), Expect = 1e-047
Identities = 83/94 (88%), Positives = 84/94 (89%)
Frame = -2 / +3
Query: 595 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSR 416
SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF ARYNKKPTITSR
Sbjct: 66 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITSR 245
Query: 415 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*I 314
EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*+
Sbjct: 246 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*V 347
Score = 87.2 bits (184), Expect(2) = 2e-031
Identities = 37/39 (94%), Positives = 38/39 (97%)
Frame = +3 / -2
Query: 318 *EEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVG 434
*E+VN VTALVPSETACLASSPGRTRRTEVWISREVMVG
Sbjct: 343 *EDVNFVTALVPSETACLASSPGRTRRTEVWISREVMVG 227
Score = 77.6 bits (163), Expect(2) = 3e-023
Identities = 33/47 (70%), Positives = 36/47 (76%)
Frame = -1 / +2
Query: 458 QARPLQQEAHHNLPGDPDFGAPRPSWRARQARRLRGHQGRYQVYFLL 318
QARPL QEAHH+LPGDPD P P RA QAR LRGHQG ++VY LL
Sbjct: 203 QARPL*QEAHHHLPGDPDLRPPCPPRRACQARGLRGHQGCHKVYILL 343
Score = 63.4 bits (132), Expect(2) = 2e-031
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = +2 / -1
Query: 485 DVVDEGVHDGHGLGRDTNVRVHLLEHLED 571
DVVDEGVHDGHGLG D +VRVHLLE LED
Sbjct: 176 DVVDEGVHDGHGLGGDADVRVHLLEDLED 90
Score = 59.7 bits (124), Expect(3) = 3e-028
Identities = 24/27 (88%), Positives = 26/27 (96%)
Frame = +3 / -2
Query: 501 EFMMDMALDEIPMSGCTCLSTLKM*IL 581
EFMMDMAL+E+PMSGCTCL TLKM*IL
Sbjct: 160 EFMMDMALEEMPMSGCTCLRTLKM*IL 80
Score = 57.0 bits (118), Expect(3) = 3e-028
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = +1 / -3
Query: 388 GRGAPKSGSPGRLWWASCCSGRAWRPRQ 471
G+G +SGSPGR WWASC SGRAW+ RQ
Sbjct: 273 GQGGRRSGSPGR*WWASCYSGRAWQTRQ 190
Score = 45.5 bits (93), Expect(2) = 3e-023
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = -1 / +2
Query: 584 VQDLHLQGAQAGAPGHWYLVQG 519
+QDLHLQG QAGAPGH +L+QG
Sbjct: 77 LQDLHLQGPQAGAPGHRHLLQG 142
Score = 40.9 bits (83), Expect(3) = 3e-028
Identities = 18/28 (64%), Positives = 23/28 (82%)
Frame = +2 / -1
Query: 314 DLRGSKLGNGLGALGDGVLGELARKDEA 397
+LRG KL + LGALGD VLG+LA +D+A
Sbjct: 347 NLRGCKLCDSLGALGDRVLGKLAGEDKA 264
>gb|CN815929.1|CN815929 HRO4515_A08_B15ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4515_A08_B15, mRNA sequence
Length = 655
Score = 183 bits (395), Expect = 3e-047
Identities = 83/93 (89%), Positives = 83/93 (89%)
Frame = -2 / +3
Query: 595 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSR 416
SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF ARYNKKPTITSR
Sbjct: 78 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITSR 257
Query: 415 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 317
EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*
Sbjct: 258 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 356
Score = 141 bits (303), Expect = 1e-034
Identities = 66/113 (58%), Positives = 72/113 (63%)
Frame = +3 / -1
Query: 249 QPISTGLKVRGNETEPSLRAAAI*EEVNLVTALVPSETACLASSPGRTRRTEVWISREVM 428
+ I+T N T R *+EVN VTALVPS+TACLASSPGRTRRTEVWISREVM
Sbjct: 424 EQITTAYD*NFNLTVNKTRLGTD*DEVNFVTALVPSDTACLASSPGRTRRTEVWISREVM 245
Query: 429 VGXXXXXXXXXXXXXXXXXXXXXXEFMMDMALDEIPMSGCTCLSTLKM*ILYV 587
VG EFMMDMAL+E+PMSGCTC TLKM*ILYV
Sbjct: 244 VGFLLYLASFADSPASFSKMSLMKEFMMDMALEEMPMSGCTCFRTLKM*ILYV 86
Score = 57.4 bits (119), Expect(3) = 9e-024
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = +2 / -3
Query: 485 DVVDEGVHDGHGLGRDTNVRVHLLEHLED 571
DVVDEGVHDGHGLG D +V +HLL+ LED
Sbjct: 188 DVVDEGVHDGHGLGGDADVGMHLLQDLED 102
Score = 48.7 bits (100), Expect(3) = 9e-024
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = +1 / -2
Query: 388 GRGAPKSGSPGRLWWASCCSGRAWRPRQ 471
G+G +SGSPGR WWASCC+ +A RQ
Sbjct: 285 GQGGRRSGSPGR*WWASCCTSQALPTRQ 202
Score = 36.3 bits (73), Expect(3) = 9e-024
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +2 / -3
Query: 308 GGDLRGSKLGNGLGALGDGVLGELARKDEA 397
G LR +L + LGALG G+LGEL +D+A
Sbjct: 365 GNRLRRGELRDSLGALGHGMLGELPGEDKA 276
>gb|CN817060.1|CN817060 HRO4527_G09_N17ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4527_G09_N17, mRNA sequence
Length = 412
Score = 183 bits (395), Expect = 3e-047
Identities = 83/93 (89%), Positives = 83/93 (89%)
Frame = -2 / +1
Query: 595 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSR 416
SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF ARYNKKPTITSR
Sbjct: 25 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGEAAKLARYNKKPTITSR 204
Query: 415 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 317
EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*
Sbjct: 205 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 303
Score = 89.0 bits (188), Expect(2) = 7e-027
Identities = 35/51 (68%), Positives = 42/51 (82%)
Frame = -1 / +3
Query: 467 RGRQARPLQQEAHHNLPGDPDFGAPRPSWRARQARRLRGHQGRYQVYFLLD 315
RGRQA LQQEAHH+LPGDPD P P RARQARR+RGHQGR+QV+ +++
Sbjct: 153 RGRQAGALQQEAHHHLPGDPDLRPPCPPRRARQARRVRGHQGRHQVHLVVE 305
Score = 87.2 bits (184), Expect(2) = 3e-032
Identities = 36/38 (94%), Positives = 38/38 (100%)
Frame = +3 / -3
Query: 321 EEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVG 434
+EVNLVTALVPS+TACLASSPGRTRRTEVWISREVMVG
Sbjct: 299 DEVNLVTALVPSDTACLASSPGRTRRTEVWISREVMVG 186
Score = 66.1 bits (138), Expect(2) = 3e-032
Identities = 25/29 (86%), Positives = 27/29 (93%)
Frame = +2 / -2
Query: 485 DVVDEGVHDGHGLGRDTNVRVHLLEHLED 571
DVVDEGVHDGHGLG D +VRVHLL+HLED
Sbjct: 135 DVVDEGVHDGHGLGGDADVRVHLLQHLED 49
Score = 61.6 bits (128), Expect(3) = 2e-029
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = +1 / -1
Query: 388 GRGAPKSGSPGRLWWASCCSGRAWRPRQ 471
G+G +SGSPGR WWASCCS AWRPRQ
Sbjct: 232 GQGGRRSGSPGR*WWASCCSAPAWRPRQ 149
Score = 60.2 bits (125), Expect(3) = 2e-029
Identities = 24/27 (88%), Positives = 26/27 (96%)
Frame = +3 / -3
Query: 501 EFMMDMALDEIPMSGCTCLSTLKM*IL 581
EFMMDMAL+E+PMSGCTC STLKM*IL
Sbjct: 119 EFMMDMALEEMPMSGCTCFSTLKM*IL 39
Score = 46.4 bits (95), Expect(2) = 7e-027
Identities = 17/22 (77%), Positives = 21/22 (95%)
Frame = -1 / +3
Query: 584 VQDLHLQGAQAGAPGHWYLVQG 519
+QDLHLQGA+AGAPGH +L+QG
Sbjct: 36 LQDLHLQGAEAGAPGHRHLLQG 101
Score = 40.0 bits (81), Expect(3) = 2e-029
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = +2 / -2
Query: 317 LRGSKLGNGLGALGDGVLGELARKDEA 397
LR +LG+GLGAL GVLGELA +D+A
Sbjct: 303 LRRGELGDGLGAL*HGVLGELAGEDKA 223
>gb|CN820741.1|CN820741 HRO4414_B07_C14ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4414_B07_C14, mRNA
sequence
Length = 454
Score = 183 bits (395), Expect = 3e-047
Identities = 85/104 (81%), Positives = 86/104 (82%)
Frame = -2 / +1
Query: 592 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSRE 413
VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF ARYNKKPTITSRE
Sbjct: 13 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITSRE 192
Query: 412 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*IAAARSDGSVSF 281
IQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*+ SV F
Sbjct: 193 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*VLVV*VALSVGF 324
Score = 121 bits (258), Expect = 2e-028
Identities = 56/101 (55%), Positives = 65/101 (64%)
Frame = -1 / +3
Query: 584 VQDLHLQGAQAGAPGHWYLVQGXXXXXXXXXXXXXEAGCRGRQARPLQQEAHHNLPGDPD 405
+QDLHLQG QAGAPGH +L+QG EA R RQA PLQQEAHH+LPGDPD
Sbjct: 21 LQDLHLQGPQAGAPGHRHLLQGHVHHELLHQRHLREARWRVRQAGPLQQEAHHHLPGDPD 200
Query: 404 FGAPRPSWRARQARRLRGHQGRYQVYFLLDRRRTERRLCFV 282
PRP ARQAR L GHQGR++V+ LL LC++
Sbjct: 201 LRPPRPPRGARQARCL*GHQGRHKVHILLGSGSLGCSLCWI 323
Score = 90.4 bits (191), Expect(2) = 3e-032
Identities = 40/51 (78%), Positives = 42/51 (82%)
Frame = +3 / -3
Query: 282 NETEPSLRAAAI*EEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVG 434
N TE + *E+VN VTALVPSETACLASSPGRTRRTEVWISREVMVG
Sbjct: 323 NPTERAT*TTRT*EDVNFVTALVPSETACLASSPGRTRRTEVWISREVMVG 171
Score = 83.5 bits (176), Expect(2) = 2e-023
Identities = 31/51 (60%), Positives = 33/51 (64%)
Frame = +1 / -1
Query: 388 GRGAPKSGSPGRLWWASCCSGRAWRPRQPAXXXXXXXXXX*WTWPWTRYQC 540
GRG +SGSPGR WWASCCSG AWR RQ A *WTWPW R +C
Sbjct: 217 GRGGRRSGSPGR*WWASCCSGPAWRTRQRASRRCR**RSS*WTWPWRRCRC 65
Score = 63.4 bits (132), Expect(2) = 3e-032
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = +2 / -2
Query: 485 DVVDEGVHDGHGLGRDTNVRVHLLEHLED 571
DVVDEGVHDGHGLG D +VRVHLLE LED
Sbjct: 120 DVVDEGVHDGHGLGGDADVRVHLLEDLED 34
Score = 40.0 bits (81), Expect(2) = 2e-023
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2 / -2
Query: 314 DLRGSKLGNGLGALGDGVLGELARKDEA 397
+LRG +L +GLGAL D VLGEL +DEA
Sbjct: 291 NLRGCELCDGLGALRDSVLGELPWEDEA 208
>gb|CN816090.1|CN816090 HRO4516_H02_P04ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4516_H02_P04, mRNA sequence
Length = 472
Score = 180 bits (387), Expect = 3e-046
Identities = 81/91 (89%), Positives = 81/91 (89%)
Frame = -2 / +2
Query: 589 ETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSREI 410
ETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF ARYNKKPTITSREI
Sbjct: 11 ETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITSREI 190
Query: 409 QTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 317
QTSVRLVLPGELAKHAVSEGTKAVTKFTSS*
Sbjct: 191 QTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 283
Score = 129 bits (276), Expect = 7e-031
Identities = 60/88 (68%), Positives = 62/88 (70%)
Frame = +3 / -2
Query: 318 *EEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVGXXXXXXXXXXXXXXXXXXXXX 497
*EEVNLVTALVPSETACLASSPG TRRTEVWIS EVMVG
Sbjct: 282 *EEVNLVTALVPSETACLASSPGSTRRTEVWISLEVMVGFLLYLASLADSPASFSKISLM 103
Query: 498 XEFMMDMALDEIPMSGCTCLSTLKM*IL 581
EFMMDMAL+E+PMSG TCL TLKM*IL
Sbjct: 102 KEFMMDMALEEMPMSGWTCLRTLKM*IL 19
Score = 79.9 bits (168), Expect(2) = 4e-022
Identities = 36/53 (67%), Positives = 41/53 (77%)
Frame = -1 / +1
Query: 476 AGCRGRQARPLQQEAHHNLPGDPDFGAPRPSWRARQARRLRGHQGRYQVYFLL 318
AG R QAR +QQEAHH+L GDPDF + S ARQARRL GHQGR+QV+FLL
Sbjct: 124 AGWRVCQAREVQQEAHHHLQGDPDFCSSCASRGARQARRL*GHQGRHQVHFLL 282
Score = 77.6 bits (163), Expect(2) = 5e-024
Identities = 28/52 (53%), Positives = 32/52 (61%)
Frame = +1 / -3
Query: 385 EGRGAPKSGSPGRLWWASCCSGRAWRPRQPAXXXXXXXXXX*WTWPWTRYQC 540
E + KSGSP R WWASCC+ RAW+ RQPA *WTWPW R +C
Sbjct: 215 EAQDEQKSGSPWR*WWASCCTSRAWQTRQPASQRYR**RSS*WTWPWRRCRC 60
Score = 48.3 bits (99), Expect(2) = 5e-024
Identities = 21/30 (70%), Positives = 25/30 (83%)
Frame = +2 / -1
Query: 317 LRGSKLGNGLGALGDGVLGELARKDEAHRS 406
LRGS+LG+GLGAL DGVLGEL K + +RS
Sbjct: 283 LRGSELGDGLGALRDGVLGELPWKHKTNRS 194
Score = 39.6 bits (80), Expect(2) = 4e-022
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = -1 / +1
Query: 584 VQDLHLQGAQAGAPGHWYLVQG 519
+QDLHLQG QAG P H +L+QG
Sbjct: 16 LQDLHLQGPQAGPPRHRHLLQG 81
>gb|CN817108.1|CN817108 HRO4528_C10_F20ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4528_C10_F20, mRNA sequence
Length = 360
Score = 136 bits (291), Expect = 6e-033
Identities = 66/85 (77%), Positives = 68/85 (80%)
Frame = -2 / +2
Query: 535 GISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSREIQTSVRLVLPGELAKHAVS 356
GISS AMSIMNSFINDIF ARYNKKPTITSREIQTSVRLVLPGELAKHAVS
Sbjct: 11 GISS*AMSIMNSFINDIFEKLAGESAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVS 190
Query: 355 EGTKAVTKFTSS*IAAARSDGSVSF 281
EGTKAVTKFTSS* AA + V+F
Sbjct: 191 EGTKAVTKFTSS*AAAQQLVD*VAF 265
Score = 86.3 bits (182), Expect(2) = 3e-023
Identities = 39/42 (92%), Positives = 40/42 (95%)
Frame = +3 / -1
Query: 309 AAI*EEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVG 434
AA *E+VNLVTALVPSETACLASSPGRTRRTEV ISREVMVG
Sbjct: 237 AAA*EDVNLVTALVPSETACLASSPGRTRRTEVCISREVMVG 112
Score = 36.8 bits (74), Expect(2) = 3e-023
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +2 / -3
Query: 485 DVVDEGVHDGHGLG 526
DVV+EGVHDGHGLG
Sbjct: 61 DVVNEGVHDGHGLG 20
>gb|CN815430.1|CN815430 HRO4509_F01_K01ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4509_F01_K01, mRNA sequence
Length = 361
Score = 101 bits (215), Expect = 2e-022
Identities = 45/46 (97%), Positives = 45/46 (97%)
Frame = -2 / +3
Query: 448 RYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*IA 311
RYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* A
Sbjct: 45 RYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*TA 182
Database: Avena_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:15 PM
Number of letters in database: 4,702,463
Number of sequences in database: 8143
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 6,451,720
Number of Sequences: 8143
Number of extensions: 70623
Number of successful extensions: 712
Number of sequences better than 1.0e-020: 8
length of database: 1,567,487
effective HSP length: 43
effective length of database: 1,217,338
effective search space used: 288509106
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)