TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.288
(1775 letters)
Database: Avena_nucl_with_EST.fasta
8143 sequences; 4,702,463 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN820568.1|CN820568 HRO4413_H07_O13ZS5 Lib AA069E1X Aven... 601 e-172
gb|CN821003.1|CN821003 HRO4422_D10_G20ZS5 Lib AA069E1X Aven... 352 1e-097
gb|CN820849.1|CN820849 HRO4420_F03_L06ZS5 Lib AA069E1X Aven... 226 6e-062
gb|CN820727.1|CN820727 HRO4416_H10_P20ZS5 Lib AA069E1X Aven... 130 8e-031
>gb|CN820568.1|CN820568 HRO4413_H07_O13ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4413_H07_O13, mRNA
sequence
Length = 839
Score = 601 bits (1306), Expect = e-172
Identities = 249/276 (90%), Positives = 261/276 (94%)
Frame = +3 / +3
Query: 549 LIAGDDLIHSDVILGSEKIEAPVLFRGIGHMANPSNSLVLKVLSASPSAYSANPKTKLAS 728
LIAGDDLI SDVILGS+KIE+PVLFRGIGH A+PSNSLVLKVLSASPSAYSANPKTKLAS
Sbjct: 12 LIAGDDLIQSDVILGSKKIESPVLFRGIGHAAHPSNSLVLKVLSASPSAYSANPKTKLAS 191
Query: 729 PPSLTGSAISLVSVMQARNNARVLLSGSLDLFSNRFLKSGVQKADSKTRYERAGNEQFVA 908
PPSLTGSAISLVSVMQARNNARVL+SGSLDLFSNRFLKSGV+KA SK +E+AGNEQFV
Sbjct: 192 PPSLTGSAISLVSVMQARNNARVLISGSLDLFSNRFLKSGVKKAGSKISHEKAGNEQFVT 371
Query: 909 EISKWVFHERGHLKAVNVRHHKVGETNEPGMYRINDDLEYSVEIYEWSGTSWKPYVADDV 1088
E SKWVFHERGHLKAVNV HHKVGETNEP MYRINDDLEYSVEIYEWSGTSWKPYVADDV
Sbjct: 372 ETSKWVFHERGHLKAVNVVHHKVGETNEPSMYRINDDLEYSVEIYEWSGTSWKPYVADDV 551
Query: 1089 QLQFFMMSPYVLKTMSTDNKGLYSTTFKVPDVYGVFQFKVEYQRLGYTGLSFTKQIPVRP 1268
Q+QF+MMSPYVLK MSTD KGLYST+FKVPDVYGVFQFKVEYQRLGYTG+S KQIPVRP
Sbjct: 552 QIQFYMMSPYVLKNMSTDKKGLYSTSFKVPDVYGVFQFKVEYQRLGYTGVSLAKQIPVRP 731
Query: 1269 YRHNEYERFITSAYPYYTASFSTMGAFFVFSFVYLY 1376
YRHNEYERFITSAYPYY ASFSTMGAFF+FSF YLY
Sbjct: 732 YRHNEYERFITSAYPYYAASFSTMGAFFIFSFAYLY 839
Score = 539 bits (1170), Expect = e-154
Identities = 229/276 (82%), Positives = 244/276 (88%)
Frame = -2 / -2
Query: 1375 YRYTNENTKKAPIVENEAV*YGYADVMNLSYSLCL*GRTGICFVKDRPVYPSLWYSTLNW 1196
Y+Y NEN KKAPIVENEA *YGYA+VMNLSYSLCL G TGICF ++ PVYPSLWYSTLNW
Sbjct: 838 YKYANENMKKAPIVENEAA*YGYAEVMNLSYSLCLYGLTGICFARETPVYPSLWYSTLNW 659
Query: 1195 KTP*TSGTLKVVEYKPLLSVDIVFRT*GLIMKN*SCTSSATYGFQLVPDHS*ISTEYSRS 1016
KTP*TSGTLK VEYKP LSVD+ FRT*GLIM N* TSSATYGFQLVPDHS*ISTEYS+S
Sbjct: 658 KTP*TSGTLKDVEYKPFLSVDMFFRT*GLIM*N*I*TSSATYGFQLVPDHS*ISTEYSKS 479
Query: 1015 SLMRYMPGSLVSPTL*CLTLTAFRCPLSWKTHLLISATNCSFPALSYLVLLSAF*TPDFR 836
SLMRYM GS VSPTL C T TAFR PLSWKTHLL+S TNCSFPA S+L+LL AF TPDFR
Sbjct: 478 SLMRYMLGSFVSPTLWCTTFTAFRWPLSWKTHLLVSVTNCSFPAFSWLILLPAFLTPDFR 299
Query: 835 NRLLNRSSDPDNSTRALFLACITETNDIADPVSDGGDANLVFGLAEYADGEADRTFRTKL 656
RLLN+SSDPD +TRALFLACITET+DIADPV DGGDANLVFG AEYADGEADRTF+TKL
Sbjct: 298 KRLLNKSSDPDINTRALFLACITETSDIADPVRDGGDANLVFGFAEYADGEADRTFKTKL 119
Query: 655 FDGLAMCPIPRNNTGASIFSDPSITSEWIRSSPAIK 548
FDG A CPIPRNNTG SIF DP+ITS+ IRSSPAIK
Sbjct: 118 FDG*AACPIPRNNTGDSIFLDPNITSDCIRSSPAIK 11
Score = 342 bits (741), Expect(2) = e-108
Identities = 153/213 (71%), Positives = 173/213 (81%)
Frame = -1 / -1
Query: 1376 VQVHKREYEESTHC*K*GGVVWVR*CYESLILIMSVRTYWNLLCKRQTSISQSLVLNFEL 1197
VQV K EYE+S+HC*K G +VW+ * YES +LIM V +WNLLC+R TS+S+ LVLNFEL
Sbjct: 839 VQVCK*EYEKSSHC*KRGSIVWIC*SYESFVLIMPVWPHWNLLCQRNTSVSKPLVLNFEL 660
Query: 1196 ENSINIWNFEGC*IQTLVVSRHSFQNVRAHHEKLKLHIISNIRLPACSGPFIDLNRVFQV 1017
ENSINI NFEGC*IQ L VS H FQN+R HH KL L+IISNI PACS PFIDLNRVFQV
Sbjct: 659 ENSINIRNFEGC*IQALFVS*HVFQNIRTHHVKLNLNIISNIWFPACSRPFIDLNRVFQV 480
Query: 1016 IINAVHAWFIGLPNLVMPNINSL*MSPLMENPFAYLCHKLLVSSSLISCFAISLLNTRLQ 837
IINAVHA FI L NLV+ NI+ L*M+PLME+PFA LCH+L +SS L++ A LLNTRLQ
Sbjct: 479 IINAVHARFICLSNLVVHNIHCL*MAPLMEDPFARLCHELFISSFLMAYLATRLLNTRLQ 300
Query: 836 EPVAKQIE*SR*QHPSIISCLHNRNQ*YS*PSE 738
E VAKQI+ SR QH SIISCLHNRNQ*YS*P E
Sbjct: 299 EAVAKQIQRSRYQHTSIISCLHNRNQ*YS*PCE 201
Score = 303 bits (656), Expect(2) = 2e-093
Identities = 144/210 (68%), Positives = 156/210 (74%)
Frame = +1 / +1
Query: 745 GQLYHWFRLCRQEIMLGCCYLDHSICLATGS*SLVFKRLIAKQDMRELETSNLWQR*ANG 924
GQLYHWF LCRQEIML C YLD ICLAT S*SLV +R +A+ MR+LE +N QR ANG
Sbjct: 208 GQLYHWFLLCRQEIMLVC*YLDRWICLATAS*SLVLRRRVAR*AMRKLEMNNS*QRRANG 387
Query: 925 FSMRGDI*RLLMLGITRLGRPMNQACTALMMTWNTLLRSMNGPEQAGSRMLLMMCSFNFS 1104
SMRG I*R ML TRL R MN ACTALMMTWNT LRSMNG EQAG+ MLLMM F+F+
Sbjct: 388 SSMRGAI*RQ*MLCTTRLERQMNLACTALMMTWNTRLRSMNGLEQAGNHMLLMMFKFSFT 567
Query: 1105 **ALTF*KLCRLTTRVCIQQPSKFQMFMEFSSSKLSTKDWDILVCLLQSRFQYVLTDIMS 1284
** L F*K C+LT R CIQ PSKF+MFMEFSSSKLST+ D LV L QSRFQ T IMS
Sbjct: 568 **VLMF*KTCQLTKRACIQHPSKFRMFMEFSSSKLSTRGLDTLVFLWQSRFQ*GHTGIMS 747
Query: 1285 MRDS*HQRTHTTPPHFQQWVLSSYSRLCTC 1374
+DS* Q HT P FQQW L SYS L TC
Sbjct: 748 TKDS*LQHIHTMLPRFQQWELFSYSHLHTC 837
Score = 297 bits (644), Expect(2) = 2e-089
Identities = 139/213 (65%), Positives = 160/213 (75%)
Frame = +2 / +2
Query: 737 AHWVSYIIGFGYAGKK*CSGAVIWITRSV*QPVPEVWCSKG**QNKI*ESWKRAICGRDK 916
+H VSYI GF YAGKK*CS IWI V*QP+PEVWC +G *Q+K *ESWK I RD+
Sbjct: 200 SHRVSYITGFCYAGKK*CSCVDIWIAGFV*QPLPEVWC*EGG*QDKP*ESWK*TIRDRDE 379
Query: 917 QMGFP*EGTSKGC*C*ASQGWGDQ*TRHVPH***PGILC*DL*MVRNKLEAVCC**CAAS 1096
QMG P*EG SKG C A QGW D+*T HVPH*** GIL *DL*MV NKLE +CC**C+ S
Sbjct: 380 QMGLP*EGPSKGSECCAPQGWRDK*T*HVPH***LGILG*DL*MVWNKLETICC**CSNS 559
Query: 1097 IFHDEPLRSENYVD*QQGFVFNNLQSSRCLWSFPVQS*VPKTGIYWSVFYKADSSTSLQT 1276
+ HDE L SE +V+*Q+G VFN LQSS CLWSFPVQS*VP+ I+W KADSS ++Q
Sbjct: 560 VLHDESLCSEKHVN*QKGLVFNILQSSGCLWSFPVQS*VPEAWIHWCFSGKADSSEAIQA 739
Query: 1277 **V*EIHNISVPILHRLIFNNGCFLRILVCVPV 1375
**V +IHN S+ IL L+FNNG F IL+C+ V
Sbjct: 740 **VRKIHNFSISILCCLVFNNGSFFHILICILV 838
Score = 277 bits (600), Expect(2) = 5e-088
Identities = 131/203 (64%), Positives = 142/203 (69%)
Frame = -3 / -3
Query: 1158 NTNPCCQST*FSERKGSS*KIEAAHHQQHTASSLFRTIHRSQQSIPGHH*CGTCLVHWSP 979
NT+P CQ T FSE K SS K E HHQQH SSLF+TIHRSQ SIP HH*CGTC VH S
Sbjct: 621 NTSPFCQLTCFSEHKDSSCKTEFEHHQQHMVSSLFQTIHRSQPSIPSHH*CGTC*VHLSL 442
Query: 978 QPCDA*H*QPLDVPSHGKPICLSLPQIARFQLSHILFCYQPFEHQTSGTGC*TDRVIQIT 799
QPC A H PLD PSHG+PIC SL +I FQLSH L CY P HQTSG+GC*T+ IQI+
Sbjct: 441 QPCGAQHSLPLDGPSHGRPICSSLSRIVHFQLSHGLSCYPPS*HQTSGSGC*TNPAIQIS 262
Query: 798 APEHYFLPA*PKPMI*LTQ*AMEETLT*SLD*LNMLMERLIEPSEPNCLMD*PCVQFLET 619
EHYFLPA* KP+I*LT * ME T*S LN LM + E S+PNCLMD VQFLET
Sbjct: 261 THEHYFLPA*QKPVI*LTL*EMEGMPT*SSGLLNTLMGKQTELSKPNCLMDELHVQFLET 82
Query: 618 IQEPQSFQTLVSHPNG*DRHQQS 550
IQE QSF +SH D QQS
Sbjct: 81 IQETQSFWIPISHLTVSDHPQQS 13
Score = 65.2 bits (136), Expect(2) = e-108
Identities = 30/48 (62%), Positives = 35/48 (72%)
Frame = -1 / -1
Query: 692 *WRG**NLQNQTV*WISHVSNSSKQYRSLNLFRP*YHIRMDKIVTSNQ 549
*W N QNQTV*W+S +SNSSKQYR LNLF YHI + +I+ SNQ
Sbjct: 155 *WGSRQNFQNQTV*WMSCMSNSSKQYRRLNLFGSQYHI*LYQIIPSNQ 12
Score = 63.4 bits (132), Expect(2) = 5e-088
Identities = 34/60 (56%), Positives = 37/60 (61%)
Frame = -3 / -3
Query: 1374 TGTQTRIRRKHPLLKMRRCSMGTLML*ISHTHYVCKDVLESAL*KTDQYIPVFGTQL*TG 1195
T Q RI +K PLLK R+ SM L L*I THY C LESAL + Q I GTQL*TG
Sbjct: 837 TSMQMRI*KKLPLLKTRQHSMDMLKL*IFRTHYACMASLESALPEKHQCIQASGTQL*TG 658
Score = 55.6 bits (115), Expect(2) = 2e-093
Identities = 25/41 (60%), Positives = 27/41 (65%)
Frame = +2 / +2
Query: 542 SHLDCW*RSYPFGCDTRV*KD*GSCIVSRNWTHG*SIKQFG 664
+ LDCW S CD + KD* SCIVSRNWT SIKQFG
Sbjct: 5 TRLDCWG*SDTVRCDIGIQKD*VSCIVSRNWTCSSSIKQFG 127
Score = 47.8 bits (98), Expect(2) = 2e-089
Identities = 24/42 (57%), Positives = 26/42 (61%)
Frame = +1 / +1
Query: 550 *LLVTILSIRM*Y*GXXXXXXXYCFEELDTWLIHQTVWF*RF 675
*LL I +M*Y YCFEELD LIHQTVWF*+F
Sbjct: 13 *LLGMI*YSQM*YWDPKRLSLLYCFEELDMQLIHQTVWF*KF 138
>gb|CN821003.1|CN821003 HRO4422_D10_G20ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4422_D10_G20, mRNA
sequence
Length = 766
Score = 352 bits (762), Expect = 1e-097
Identities = 140/160 (87%), Positives = 147/160 (91%)
Frame = +3 / +3
Query: 927 FHERGHLKAVNVRHHKVGETNEPGMYRINDDLEYSVEIYEWSGTSWKPYVADDVQLQFFM 1106
F RGHLKAVNV HHKVGETNEP MYRINDDLEYSVEIYEWSGTSWKPYVADDVQ+QF+M
Sbjct: 12 FGTRGHLKAVNVVHHKVGETNEPSMYRINDDLEYSVEIYEWSGTSWKPYVADDVQIQFYM 191
Query: 1107 MSPYVLKTMSTDNKGLYSTTFKVPDVYGVFQFKVEYQRLGYTGLSFTKQIPVRPYRHNEY 1286
MSPYVLK MSTD KGLYST+FKVPDVYGVFQFKVEYQRLGYTG+S KQIPVRPYRHNEY
Sbjct: 192 MSPYVLKNMSTDKKGLYSTSFKVPDVYGVFQFKVEYQRLGYTGVSLAKQIPVRPYRHNEY 371
Query: 1287 ERFITSAYPYYTASFSTMGAFFVFSFVYLYHK*RTHGSAQ 1406
ERFITSAYPYY ASFSTMGAFF+FSF YLYHK* +H A+
Sbjct: 372 ERFITSAYPYYAASFSTMGAFFIFSFAYLYHK*ISHRIAE 491
Score = 293 bits (635), Expect = 5e-080
Identities = 125/152 (82%), Positives = 133/152 (87%)
Frame = -2 / -1
Query: 1390 VLYLWYRYTNENTKKAPIVENEAV*YGYADVMNLSYSLCL*GRTGICFVKDRPVYPSLWY 1211
++YLWY+Y NEN KKAPIVENEA *YGYA+VMNLSYSLCL G TGICF ++ PVYPSLWY
Sbjct: 475 LIYLWYKYANENMKKAPIVENEAA*YGYAEVMNLSYSLCLYGLTGICFARETPVYPSLWY 296
Query: 1210 STLNWKTP*TSGTLKVVEYKPLLSVDIVFRT*GLIMKN*SCTSSATYGFQLVPDHS*IST 1031
STLNWKTP*TSGTLK VEYKP LSVD+ FRT*GLIM N* TSSATYGFQLVPDHS*IST
Sbjct: 295 STLNWKTP*TSGTLKDVEYKPFLSVDMFFRT*GLIM*N*I*TSSATYGFQLVPDHS*IST 116
Query: 1030 EYSRSSLMRYMPGSLVSPTL*CLTLTAFRCPL 935
EYS+SSLMRYM GS VSPTL C T TAFR PL
Sbjct: 115 EYSKSSLMRYMLGSFVSPTLWCTTFTAFRWPL 20
Score = 251 bits (542), Expect = 3e-067
Identities = 112/162 (69%), Positives = 127/162 (78%)
Frame = -1 / -3
Query: 1412 RDLCAPMSPLFVVQVHKREYEESTHC*K*GGVVWVR*CYESLILIMSVRTYWNLLCKRQT 1233
R C M+ LFVVQV K EYE+S+HC*K G +VW+ * YES +LIM V +WNLLC+R T
Sbjct: 497 RTFCYSMAYLFVVQVCK*EYEKSSHC*KRGSIVWIC*SYESFVLIMPVWPHWNLLCQRNT 318
Query: 1232 SISQSLVLNFELENSINIWNFEGC*IQTLVVSRHSFQNVRAHHEKLKLHIISNIRLPACS 1053
S+S+ LVLNFELENSINI NFEGC*IQ L VS H FQN+R HH KL L+IISNI PACS
Sbjct: 317 SVSKPLVLNFELENSINIRNFEGC*IQALFVS*HVFQNIRTHHVKLNLNIISNIWFPACS 138
Query: 1052 GPFIDLNRVFQVIINAVHAWFIGLPNLVMPNINSL*MSPLME 927
PFIDLNRVFQVIINAVHA FI L NLV+ NI+ L*M+P E
Sbjct: 137 RPFIDLNRVFQVIINAVHARFICLSNLVVHNIHCL*MAPRAE 12
Score = 220 bits (475), Expect = 5e-058
Identities = 105/153 (68%), Positives = 113/153 (73%)
Frame = +1 / +1
Query: 928 SMRGDI*RLLMLGITRLGRPMNQACTALMMTWNTLLRSMNGPEQAGSRMLLMMCSFNFS* 1107
S RG I*R ML TRL R MN ACTALMMTWNT LRSMNG EQAG+ MLLMM F+F+*
Sbjct: 13 SARGAI*RQ*MLCTTRLERQMNLACTALMMTWNTRLRSMNGLEQAGNHMLLMMFKFSFT* 192
Query: 1108 *ALTF*KLCRLTTRVCIQQPSKFQMFMEFSSSKLSTKDWDILVCLLQSRFQYVLTDIMSM 1287
* L F*K C+LT R CIQ PSKF+MFMEFSSSKLST+ D LV L QSRFQ T IMS
Sbjct: 193 *VLMF*KTCQLTKRACIQHPSKFRMFMEFSSSKLSTRGLDTLVFLWQSRFQ*GHTGIMST 372
Query: 1288 RDS*HQRTHTTPPHFQQWVLSSYSRLCTCTTNK 1386
+DS* Q HT P FQQW L SYS L TCTTN+
Sbjct: 373 KDS*LQHIHTMLPRFQQWELFSYSHLHTCTTNR 471
Score = 212 bits (457), Expect = 2e-055
Identities = 98/150 (65%), Positives = 114/150 (76%)
Frame = +2 / +2
Query: 935 EGTSKGC*C*ASQGWGDQ*TRHVPH***PGILC*DL*MVRNKLEAVCC**CAASIFHDEP 1114
EG SKG C A QGW D+*T HVPH*** GIL *DL*MV NKLE +CC**C+ S+ HDE
Sbjct: 20 EGPSKGSECCAPQGWRDK*T*HVPH***LGILG*DL*MVWNKLETICC**CSNSVLHDES 199
Query: 1115 LRSENYVD*QQGFVFNNLQSSRCLWSFPVQS*VPKTGIYWSVFYKADSSTSLQT**V*EI 1294
L SE +V+*Q+G VFN LQSS CLWSFPVQS*VP+ I+W KADSS ++Q **V +I
Sbjct: 200 LCSEKHVN*QKGLVFNILQSSGCLWSFPVQS*VPEAWIHWCFSGKADSSEAIQA**VRKI 379
Query: 1295 HNISVPILHRLIFNNGCFLRILVCVPVPQI 1384
HN S+ IL L+FNNG F IL+C+ VPQI
Sbjct: 380 HNFSISILCCLVFNNGSFFHILICILVPQI 469
Score = 120 bits (256), Expect(2) = 2e-043
Identities = 52/75 (69%), Positives = 54/75 (72%)
Frame = -3 / -2
Query: 1158 NTNPCCQST*FSERKGSS*KIEAAHHQQHTASSLFRTIHRSQQSIPGHH*CGTCLVHWSP 979
NT+P CQ T FSE K SS K E HHQQH SSLF+TIHRSQ SIP HH*CGTC VH S
Sbjct: 243 NTSPFCQLTCFSEHKDSSCKTEFEHHQQHMVSSLFQTIHRSQPSIPSHH*CGTC*VHLSL 64
Query: 978 QPCDA*H*QPLDVPS 934
QPC A H PLD PS
Sbjct: 63 QPCGAQHSLPLDGPS 19
Score = 72.1 bits (151), Expect(2) = 2e-043
Identities = 37/63 (58%), Positives = 40/63 (63%)
Frame = -3 / -2
Query: 1383 ICGTGTQTRIRRKHPLLKMRRCSMGTLML*ISHTHYVCKDVLESAL*KTDQYIPVFGTQL 1204
ICGT Q RI +K PLLK R+ SM L L*I THY C LESAL + Q I GTQL
Sbjct: 468 ICGTSMQMRI*KKLPLLKTRQHSMDMLKL*IFRTHYACMASLESALPEKHQCIQASGTQL 289
Query: 1203 *TG 1195
*TG
Sbjct: 288 *TG 280
>gb|CN820849.1|CN820849 HRO4420_F03_L06ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4420_F03_L06, mRNA
sequence
Length = 577
Score = 226 bits (488), Expect(2) = 6e-062
Identities = 90/105 (85%), Positives = 96/105 (91%)
Frame = +3 / +3
Query: 1080 DDVQLQFFMMSPYVLKTMSTDNKGLYSTTFKVPDVYGVFQFKVEYQRLGYTGLSFTKQIP 1259
DDVQ+ F+MMSPYVLK MSTD KGLYST+FKVPDVYGVFQFKVEYQRLGYT +S KQIP
Sbjct: 3 DDVQI*FYMMSPYVLKNMSTDKKGLYSTSFKVPDVYGVFQFKVEYQRLGYTAVSLAKQIP 182
Query: 1260 VRPYRHNEYERFITSAYPYYTASFSTMGAFFVFSFVYLYHK*RTH 1394
VRPYRHNEYERFITSAYPYY ASFSTMGAFF+FSF YLYHK* +H
Sbjct: 183 VRPYRHNEYERFITSAYPYYAASFSTMGAFFIFSFAYLYHK*ISH 317
Score = 194 bits (418), Expect = 4e-050
Identities = 85/108 (78%), Positives = 91/108 (84%)
Frame = -2 / -1
Query: 1402 ALP*VLYLWYRYTNENTKKAPIVENEAV*YGYADVMNLSYSLCL*GRTGICFVKDRPVYP 1223
A+ ++YL YRY NEN KKAPIVENEA *YGYA+VMNLSYSLCL G TGICF ++ VYP
Sbjct: 325 AIQWLIYL*YRYANENMKKAPIVENEAA*YGYAEVMNLSYSLCLYGLTGICFARETAVYP 146
Query: 1222 SLWYSTLNWKTP*TSGTLKVVEYKPLLSVDIVFRT*GLIMKN*SCTSS 1079
SLWYSTLNWKTP*TSGTLK VEYKP LSVDI FRT*GLIM N* TSS
Sbjct: 145 SLWYSTLNWKTP*TSGTLKDVEYKPFLSVDIFFRT*GLIM*N*I*TSS 2
Score = 173 bits (372), Expect = 9e-044
Identities = 73/108 (67%), Positives = 87/108 (80%)
Frame = -1 / -3
Query: 1403 CAPMSPLFVVQVHKREYEESTHC*K*GGVVWVR*CYESLILIMSVRTYWNLLCKRQTSIS 1224
C M+ LFV+QV K EYE+ +HC*K G +VW+ * YESL+LIM V +WNLLC+R +S+S
Sbjct: 326 CYSMAYLFVIQVCK*EYEKGSHC*KRGSIVWIC*SYESLVLIMPVWPHWNLLCQRNSSVS 147
Query: 1223 QSLVLNFELENSINIWNFEGC*IQTLVVSRHSFQNVRAHHEKLKLHII 1080
+ LVLNFELENSINIWNFEGC*I TL+VS H FQNVR HH KL L+II
Sbjct: 146 KPLVLNFELENSINIWNFEGC*I*TLLVS*HIFQNVRTHHVKLNLNII 3
Score = 144 bits (310), Expect = 3e-035
Identities = 64/102 (62%), Positives = 77/102 (75%)
Frame = +2 / +2
Query: 1079 **CAASIFHDEPLRSENYVD*QQGFVFNNLQSSRCLWSFPVQS*VPKTGIYWSVFYKADS 1258
**C+ + HDE LRSE YV+*Q+GF+FN LQSSRCLWSFPVQS*VP+ I+ KADS
Sbjct: 2 **CSNLVLHDESLRSEKYVN*QEGFIFNILQSSRCLWSFPVQS*VPEAWIHCCFSGKADS 181
Query: 1259 STSLQT**V*EIHNISVPILHRLIFNNGCFLRILVCVPVPQI 1384
S ++Q **V EIHN S+ IL L+FNNG IL+C+PV QI
Sbjct: 182 SEAIQA**VREIHNFSISILCCLVFNNGSLFHILICIPVSQI 307
Score = 142 bits (304), Expect = 2e-034
Identities = 68/103 (66%), Positives = 75/103 (72%)
Frame = +1 / +1
Query: 1078 LMMCSFNFS**ALTF*KLCRLTTRVCIQQPSKFQMFMEFSSSKLSTKDWDILVCLLQSRF 1257
LMM F+F+** LTF*K+C+LT RV IQ PSKFQMFMEFSSSKLST+ D L+ L QSRF
Sbjct: 1 LMMFKFSFT**VLTF*KICQLTRRVYIQHPSKFQMFMEFSSSKLSTRGLDTLLFLWQSRF 180
Query: 1258 QYVLTDIMSMRDS*HQRTHTTPPHFQQWVLSSYSRLCTCTTNK 1386
Q T IMS RDS* Q HT P FQQW SYS L TC TN+
Sbjct: 181 Q*GHTGIMSTRDS*LQHIHTMLPRFQQWEPFSYSHLHTCITNR 309
Score = 103 bits (220), Expect = 8e-023
Identities = 55/102 (53%), Positives = 60/102 (58%)
Frame = -3 / -2
Query: 1383 ICGTGTQTRIRRKHPLLKMRRCSMGTLML*ISHTHYVCKDVLESAL*KTDQYIPVFGTQL 1204
IC TG Q RI ++ PLLK R+ SM L L*IS THY C LESAL + Q I GTQL
Sbjct: 306 ICDTGMQMRI*KRLPLLKTRQHSMDMLKL*ISRTHYACMASLESALPEKQQCIQASGTQL 127
Query: 1203 *TGXXXXXXXXXXXLNTNPCCQST*FSERKGSS*KIEAAHHQ 1078
*TG LN NP CQ T FSERK SS K + HHQ
Sbjct: 126 *TGKLHKHLEL*RMLNINPSCQLTYFSERKDSSCKTKFEHHQ 1
Score = 27.6 bits (54), Expect(2) = 6e-062
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2 / +3
Query: 1439 GTECCAISQELPGANFMEPCFCTANLDNI*RP 1534
GTE + + +P NF+ C ANL + RP
Sbjct: 330 GTERLIVPRRVPRCNFVGHLLCRANL*YLGRP 425
>gb|CN820727.1|CN820727 HRO4416_H10_P20ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4416_H10_P20, mRNA
sequence
Length = 338
Score = 130 bits (278), Expect = 8e-031
Identities = 51/63 (80%), Positives = 55/63 (87%)
Frame = +3 / +1
Query: 1218 RLGYTGLSFTKQIPVRPYRHNEYERFITSAYPYYTASFSTMGAFFVFSFVYLYHK*RTHG 1397
RLGYTG+S KQIPVRPYRHNEYERFIT AYPYY ASFSTMGAFF+FSF YLYHK* +H
Sbjct: 1 RLGYTGVSLAKQIPVRPYRHNEYERFITPAYPYYAASFSTMGAFFIFSFAYLYHK*ISHR 180
Query: 1398 SAQ 1406
A+
Sbjct: 181 IAE 189
Score = 114 bits (243), Expect = 5e-026
Identities = 44/57 (77%), Positives = 49/57 (85%)
Frame = -2 / -1
Query: 1390 VLYLWYRYTNENTKKAPIVENEAV*YGYADVMNLSYSLCL*GRTGICFVKDRPVYPS 1220
++YLWY+Y NEN KKAPIVENEA *YGYA VMNLSYSLCL G TGICF ++ PVYPS
Sbjct: 173 LIYLWYKYANENMKKAPIVENEAA*YGYAGVMNLSYSLCLYGLTGICFARETPVYPS 3
Database: Avena_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:15 PM
Number of letters in database: 4,702,463
Number of sequences in database: 8143
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 20,054,225
Number of Sequences: 8143
Number of extensions: 286306
Number of successful extensions: 1565
Number of sequences better than 1.0e-020: 4
length of database: 1,567,487
effective HSP length: 45
effective length of database: 1,201,052
effective search space used: 655774392
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)