TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.249
(684 letters)
Database: Avena_nucl_with_EST.fasta
8143 sequences; 4,702,463 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN819385.1|CN819385 HRO4405_D04_G07ZS5 Lib AA069E1X Aven... 262 4e-071
gb|CN820486.1|CN820486 HRO4419_H07_P13ZS5 Lib AA069E1X Aven... 198 8e-052
gb|CN819555.1|CN819555 HRO4401_E07_I13ZS5 Lib AA069E1X Aven... 144 6e-039
gb|CN814880.1|CN814880 HRO4503_E04_J07ZS5 Lib AA071E1X Aven... 144 2e-035
gb|CN821066.1|CN821066 HRO4427_B06_D11ZS5 Lib AA069E1X Aven... 119 4e-030
gb|CN819715.1|CN819715 HRO4403_C08_F15ZS5 Lib AA069E1X Aven... 104 1e-023
gb|L40147.1|ASTNRA Avena strigosa nitrate reductase gene, p... 73 3e-014
gb|CN817900.1|CN817900 HRO4462_C01_F02ZS5 Lib AA070E1X Aven... 31 0.23
gb|CN818381.1|CN818381 HRO4469_E03_J05ZS5 Lib AA070E1X Aven... 31 0.23
gb|CN818559.1|CN818559 HRO4457_H05_P09ZS5 Lib AA070E1X Aven... 31 0.23
gb|CN821420.1|CN821420 HRO4425_B05_C09ZS5 Lib AA069E1X Aven... 31 0.23
gb|CN821468.1|CN821468 HRO4425_F10_K19ZS5 Lib AA069E1X Aven... 28 0.32
gb|CN818958.1|CN818958 HRO4474_G01_N02ZS5 Lib AA070E1X Aven... 30 0.32
gb|CN819956.1|CN819956 HRO4409_B04_C07ZS5 Lib AA069E1X Aven... 30 0.44
gb|CN820576.1|CN820576 HRO4415_A07_B13ZS5 Lib AA069E1X Aven... 30 0.44
gb|CN821237.1|CN821237 HRO4423_A08_B15ZS5 Lib AA069E1X Aven... 30 0.44
gb|AF140554.1|AF140554 Avena sativa DNA-binding protein WRK... 29 0.83
emb|AJ010728.1|AFA010728 Avena fatua alpha-Amy2A gene, exon... 29 0.83
gb|BQ548073.1|BQ548073 CDO57-5 CDO Avena sativa cDNA clone ... 29 1.1
gb|CN816040.1|CN816040 HRO4516_C03_F06ZS5 Lib AA071E1X Aven... 29 1.1
gb|CN816463.1|CN816463 HRO4521_A05_A09ZS5 Lib AA071E1X Aven... 29 1.1
gb|AM071411.1|AM071411 AM071411 Avena sativa leaf 3 weeks o... 24 1.3
gb|CN180767.1|CN180767 As02_cdo1090_C ITEC CDO Oat cDNA Lib... 28 1.6
gb|CN814756.1|CN814756 HRO4502_B07_C14ZS5 Lib AA071E1X Aven... 28 1.6
gb|CN815677.1|CN815677 HRO4514_C10_E20ZS5 Lib AA071E1X Aven... 28 1.6
gb|CN816064.1|CN816064 HRO4516_E06_J12ZS5 Lib AA071E1X Aven... 28 1.6
gb|CN816672.1|CN816672 HRO4523_D12_H23ZS5 Lib AA071E1X Aven... 28 1.6
gb|CN821434.1|CN821434 HRO4425_C07_E13ZS5 Lib AA069E1X Aven... 28 1.6
gb|AY618695.1| Avena clauda strain CAV5566/1 beta-amyrin sy... 28 1.6
gb|CN819560.1|CN819560 HRO4401_F01_K01ZS5 Lib AA069E1X Aven... 28 2.2
gb|CN819960.1|CN819960 HRO4409_B12_C23ZS5 Lib AA069E1X Aven... 28 2.2
gb|L39777.1|ASTRASTL4A Avena sativa thaumatin-like pathogen... 28 2.2
gb|BE439337.1|BE439337 CDO1313_WHE05F12F ITEC CDO Oat cDNA ... 27 3.0
gb|CN815350.1|CN815350 HRO4508_F12_L24ZS5 Lib AA071E1X Aven... 27 3.0
gb|CN815989.1|CN815989 HRO4515_F08_L15ZS5 Lib AA071E1X Aven... 27 3.0
gb|CN818147.1|CN818147 HRO4471_E04_I07ZS5 Lib AA070E1X Aven... 27 3.0
gb|CN820179.1|CN820179 HRO4412_A09_B18ZS5 Lib AA069E1X Aven... 27 3.0
gb|CN820746.1|CN820746 HRO4414_C01_E02ZS5 Lib AA069E1X Aven... 27 3.0
dbj|AB076980.1| Avena sativa AsHHT1 mRNA for hydroxyanthran... 27 3.0
gb|BE439280.1|BE439280 CDO203_WHE04E11F ITEC CDO Oat cDNA L... 23 3.8
gb|CN816924.1|CN816924 HRO4526_C09_E18ZS5 Lib AA071E1X Aven... 24 4.0
gb|CN816108.1|CN816108 HRO4517_A12_A23ZS5 Lib AA071E1X Aven... 27 4.1
gb|CN816341.1|CN816341 HRO4519_F05_L09ZS5 Lib AA071E1X Aven... 27 4.1
gb|CN816373.1|CN816373 HRO4520_A03_B06ZS5 Lib AA071E1X Aven... 27 4.1
gb|CN816836.1|CN816836 HRO4525_D02_G03ZS5 Lib AA071E1X Aven... 27 4.1
gb|CN817309.1|CN817309 HRO4458_D03_H06ZS5 Lib AA070E1X Aven... 27 4.1
gb|CN818979.1|CN818979 HRO4474_E10_J20ZS5 Lib AA070E1X Aven... 27 4.1
gb|CN818997.1|CN818997 HRO4474_D04_H08ZS5 Lib AA070E1X Aven... 27 4.1
gb|CN819661.1|CN819661 HRO4402_G01_M02ZS5 Lib AA069E1X Aven... 27 4.1
gb|CN821159.1|CN821159 HRO4428_B08_D16ZS5 Lib AA069E1X Aven... 27 4.1
gb|CN818626.1|CN818626 HRO4455_A03_A05ZS5 Lib AA070E1X Aven... 22 5.4
gb|CN816588.1|CN816588 HRO4522_E05_I10ZS5 Lib AA071E1X Aven... 26 5.6
gb|CN817303.1|CN817303 HRO4464_H08_O16ZS5 Lib AA070E1X Aven... 26 5.6
gb|CN817353.1|CN817353 HRO4458_C06_F12ZS5 Lib AA070E1X Aven... 26 5.6
gb|CN817974.1|CN817974 HRO4460_G05_M10ZS5 Lib AA070E1X Aven... 26 5.6
gb|CN818042.1|CN818042 HRO4472_D06_G12ZS5 Lib AA070E1X Aven... 26 5.6
gb|CN818100.1|CN818100 HRO4471_H07_O13ZS5 Lib AA070E1X Aven... 26 5.6
gb|CN818275.1|CN818275 HRO4470_C10_F20ZS5 Lib AA070E1X Aven... 26 5.6
gb|CN818335.1|CN818335 HRO4457_B03_D05ZS5 Lib AA070E1X Aven... 26 5.6
gb|CN818377.1|CN818377 HRO4469_D10_H19ZS5 Lib AA070E1X Aven... 26 5.6
gb|CN818631.1|CN818631 HRO4467_D05_G09ZS5 Lib AA070E1X Aven... 26 5.6
gb|CN818927.1|CN818927 HRO4474_H10_P20ZS5 Lib AA070E1X Aven... 26 5.6
gb|CN820831.1|CN820831 HRO4420_D04_H08ZS5 Lib AA069E1X Aven... 26 5.6
gb|CN821481.1|CN821481 HRO4425_G11_M21ZS5 Lib AA069E1X Aven... 26 5.6
gb|AY083680.1| Avena sativa clone OP9 receptor kinase gene ... 26 5.6
dbj|AB076982.1| Avena sativa AsHHT3 mRNA for hydroxyanthran... 26 5.6
gb|CN816102.1|CN816102 HRO4517_A06_A11ZS5 Lib AA071E1X Aven... 23 5.6
gb|CN814734.1|CN814734 HRO4501_H08_O15ZS5 Lib AA071E1X Aven... 26 7.7
gb|CN815923.1|CN815923 HRO4515_A01_B01ZS5 Lib AA071E1X Aven... 26 7.7
gb|CN816921.1|CN816921 HRO4526_C06_E12ZS5 Lib AA071E1X Aven... 26 7.7
gb|CN817685.1|CN817685 HRO4461_G09_N17ZS5 Lib AA070E1X Aven... 26 7.7
gb|CN818365.1|CN818365 HRO4457_B09_D17ZS5 Lib AA070E1X Aven... 26 7.7
gb|CN818419.1|CN818419 HRO4469_B06_D11ZS5 Lib AA070E1X Aven... 26 7.7
gb|CN818716.1|CN818716 HRO4468_A05_A10ZS5 Lib AA070E1X Aven... 26 7.7
gb|CN818885.1|CN818885 HRO4473_D05_XXXZS5 Lib AA070E1X Aven... 26 7.7
gb|CN819739.1|CN819739 HRO4403_E10_J19ZS5 Lib AA069E1X Aven... 26 7.7
gb|CN819904.1|CN819904 HRO4407_F05_L09ZS5 Lib AA069E1X Aven... 26 7.7
gb|CN820953.1|CN820953 HRO4421_H02_O03ZS5 Lib AA069E1X Aven... 26 7.7
gb|CN821295.1|CN821295 HRO4423_G02_N03ZS5 Lib AA069E1X Aven... 26 7.7
gb|CN821522.1|CN821522 HRO4426_C06_E12ZS5 Lib AA069E1X Aven... 26 7.7
gb|CN817794.1|CN817794 HRO4461_B02_D03ZS5 Lib AA070E1X Aven... 22 8.6
gb|CN821013.1|CN821013 HRO4422_E09_I18ZS5 Lib AA069E1X Aven... 25 8.8
gb|U20000.1|AFU20000 Avena fatua nondormancy-associated clo... 22 9.4
>gb|CN819385.1|CN819385 HRO4405_D04_G07ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4405_D04_G07, mRNA
sequence
Length = 673
Score = 262 bits (567), Expect = 4e-071
Identities = 107/119 (89%), Positives = 114/119 (95%)
Frame = -1 / +1
Query: 531 KDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDVGHSSTARAMMDEYLVG 352
+DDCWL+IGGKVYNVTKFL+DHPGGDDVLLSSTAKDATDDFEDVGHS+TARAMMDEY VG
Sbjct: 4 QDDCWLIIGGKVYNVTKFLDDHPGGDDVLLSSTAKDATDDFEDVGHSTTARAMMDEYYVG 183
Query: 351 EIDAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAILGLAVAVRMYTKSESA* 175
EIDA TIPT+VKY PKQPHYNQDKT EF+IKILQFLVPLAILGLAVAVR+YTKSESA*
Sbjct: 184 EIDATTIPTRVKYVAPKQPHYNQDKTPEFIIKILQFLVPLAILGLAVAVRIYTKSESA* 360
Score = 198 bits (427), Expect = 8e-052
Identities = 92/120 (76%), Positives = 95/120 (79%)
Frame = +2 / -3
Query: 170 RD*ADSDLVYILTATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASI 349
R *ADSDLV I TATARPSIA+GT+NWRILM NS VLSWL*CGCLG Y TLVGIV ASI
Sbjct: 365 RH*ADSDLV*IRTATARPSIAKGTRNWRILMMNSGVLSWL*CGCLGATYLTLVGIVVASI 186
Query: 350 SPTKYSSIIARAVLLCPTSSKSSVASLAVEDXXXXXXXXXXXXNLVTLYTLPPMTSQQSS 529
SPT YSSIIARAV+L PTSSKSSVASLAVED NLVTLYT PPM SQQSS
Sbjct: 185 SPT*YSSIIARAVVLWPTSSKSSVASLAVEDSRTSSPPGWSSRNLVTLYTFPPMMSQQSS 6
Score = 191 bits (411), Expect = 1e-049
Identities = 79/120 (65%), Positives = 84/120 (70%)
Frame = +3 / -1
Query: 171 ETRQIPTWCTSLQRRPDPVLRGGPKTGGS**RTPGSCPGCSAAAWGACTSPWWVSWLHQS 350
+TRQ PTWC S+QRR PV G TGGS** T GSCPGCSAAAWG T PWWVSW +S
Sbjct: 364 DTRQTPTWCRSVQRRQGPVSPRGRGTGGS***TRGSCPGCSAAAWGQHT*PWWVSWWRRS 185
Query: 351 HPLSTRPSLHGQCCCAPHLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASSRP 530
H STRPS G+ CC PH R+ R HPWQ KTA H LQG TW HCTP RR* ASSRP
Sbjct: 184 HQHSTRPSSPGRSCCGPHPRSRRSHPWQLKTAGHRHLQGGHRGTW*HCTPFRR**ASSRP 5
Score = 183 bits (395), Expect = 2e-047
Identities = 79/120 (65%), Positives = 86/120 (71%)
Frame = -3 / +3
Query: 529 GRLLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQQHCPCNDGRVLSG* 350
GRLLA HRR+GVQC QV PWR C AVF+CQGC R R CG Q P +DGRVL *
Sbjct: 6 GRLLAHHRRKGVQCHQVPR*PPWR*RCPAVFNCQGCDRRLRGCGPQHDRPGDDGRVLCW* 185
Query: 349 D*CSHDTHQGEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSGRRCKDVHQVGICLVS 170
D HDTHQG+V PQAAALQPGQDP V HQDPPV P +TG RRC D+HQVG+CLVS
Sbjct: 186 DRRHHDTHQGQVCCPQAAALQPGQDPRVHHQDPPVPRPLGDTGPCRRCTDLHQVGVCLVS 365
Score = 98.7 bits (209), Expect(2) = 4e-029
Identities = 40/64 (62%), Positives = 52/64 (81%)
Frame = +1 / -2
Query: 331 YRGCINLTH*VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAAD 510
YRG ++LT+ VLVHH G AV HI E++G ILGS RQQ+I+ SRV++++LG IVHL+AD
Sbjct: 204 YRGGVDLTNIVLVHHRPGGRAVAHILEVVGRILGS*RQQDIVTSRVVIEELGDIVHLSAD 25
Query: 511 DEPA 522
DEPA
Sbjct: 24 DEPA 13
Score = 88.1 bits (186), Expect(2) = 2e-022
Identities = 40/64 (62%), Positives = 42/64 (65%)
Frame = -2 / +2
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST*WVRLM 342
AGSSSA RCTM PS TLE M CCL LPRM P S+MW TA P +*WTST VR
Sbjct: 14 AGSSSAERCTMSPSSSMTTLEVTMSCCLQLPRMRPTTSRMWATARPPGR*WTSTMLVRST 193
Query: 341 QPRY 330
PRY
Sbjct: 194 PPRY 205
Score = 44.1 bits (90), Expect(2) = 4e-029
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = +1 / -2
Query: 175 LGRFRLGVHPYSDGQTQYCEGDQK 246
LGR RLGV PYSDG+ QY +GD++
Sbjct: 360 LGRLRLGVDPYSDGKAQYRQGDEE 289
Score = 31.8 bits (63), Expect(2) = 2e-022
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -2 / +2
Query: 239 SPSQYWVWPSL*GCTPSRN 183
SP +YW PSL G TPSR+
Sbjct: 296 SPWRYWALPSLYGSTPSRS 352
>gb|CN820486.1|CN820486 HRO4419_H07_P13ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4419_H07_P13, mRNA
sequence
Length = 546
Score = 198 bits (427), Expect = 8e-052
Identities = 82/96 (85%), Positives = 90/96 (93%)
Frame = -1 / +2
Query: 462 GGDDVLLSSTAKDATDDFEDVGHSSTARAMMDEYLVGEIDAATIPTKVKYTPPKQPHYNQ 283
G DVL SSTAKDATDDFEDVGHS+TARAM+DEY +G++DA+TIPT+ KYTPPKQPHYNQ
Sbjct: 2 GTRDVLFSSTAKDATDDFEDVGHSTTARAMLDEYYIGDVDASTIPTQTKYTPPKQPHYNQ 181
Query: 282 DKTQEFVIKILQFLVPLAILGLAVAVRMYTKSESA* 175
DKT EF+IKILQFLVPLAILGLAVAVRMYTKSESA*
Sbjct: 182 DKTPEFIIKILQFLVPLAILGLAVAVRMYTKSESA* 289
Score = 162 bits (348), Expect = 6e-041
Identities = 73/90 (81%), Positives = 78/90 (86%)
Frame = +2 / -1
Query: 173 D*ADSDLVYILTATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASIS 352
+*ADSDLVYILTATARP +ARGT+NWRILM NS VLSWL*CGC GGVYF VGIV AS S
Sbjct: 291 N*ADSDLVYILTATARPRMARGTRNWRILMMNSGVLSWL*CGCFGGVYFVWVGIVDASTS 112
Query: 353 PTKYSSIIARAVLLCPTSSKSSVASLAVED 442
P YSS IARAV+L PTSSKSSVASLAVE+
Sbjct: 111 PI*YSSSIARAVVLWPTSSKSSVASLAVEE 22
Score = 112 bits (239), Expect = 7e-026
Identities = 48/88 (54%), Positives = 54/88 (61%)
Frame = +3 / -2
Query: 186 PTWCTSLQRRPDPVLRGGPKTGGS**RTPGSCPGCSAAAWGACTSPWWVSWLHQSHPLST 365
PTWCTS + RP GG TGGS** T GSCPGCSAAA CTS VS H H ST
Sbjct: 278 PTWCTS*RLRPGQGWPGGQGTGGS***TQGSCPGCSAAASAGCTSSG*VSSTHPHHQYST 99
Query: 366 RPSLHGQCCCAPHLRNHR*HPWQWKTAE 449
P+ GQ CC H ++H+ HPWQ + E
Sbjct: 98 HPASRGQSCCGRHPQSHQSHPWQLRRRE 15
Score = 100 bits (212), Expect = 3e-022
Identities = 48/92 (52%), Positives = 56/92 (60%)
Frame = -3 / +1
Query: 448 SAVFHCQGCYR*FRRCGAQQHCPCNDGRVLSG*D*CSHDTHQGEVHAPQAAALQPGQDPG 269
S + +CQGC * C Q CP + G VL * C DT+ EVH +AAALQPGQDP
Sbjct: 16 SLLLNCQGCD**L*GCRPQHDCPRDAG*VLYW*CGCVDDTYPDEVHPAEAAALQPGQDP* 195
Query: 268 VRHQDPPVFGPPRNTGSGRRCKDVHQVGICLV 173
V HQDPPV PP + GR DVHQVG+ L+
Sbjct: 196 VHHQDPPVPCPPGHPWPGRSR*DVHQVGVGLI 291
Score = 34.1 bits (68), Expect(2) = 2e-004
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = -2 / +3
Query: 434 LPRMLPMISKMWGTAALPVQ*WTST*WVRLMQPRY 330
LPRM M +M TA LP + W ST V M+ RY
Sbjct: 30 LPRMRLMTLRMSATARLPARCWMSTILVMWMRRRY 134
Score = 30.4 bits (60), Expect = 0.32
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1 / -3
Query: 175 LGRFRLGVHPYSDGQTQYCEGDQK 246
L R RLGVHP GQ + +GD++
Sbjct: 289 LSRLRLGVHPNGYGQAKDGQGDKE 218
Score = 25.8 bits (50), Expect = 7.7
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3 / +3
Query: 540 AWPPPRGCTP 569
AWP P GCTP
Sbjct: 243 AWP*PLGCTP 272
Score = 24.4 bits (47), Expect(2) = 2e-004
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -2 / +3
Query: 239 SPSQYWVWPSL*GCTPSRN 183
SP WP GCTPSR+
Sbjct: 225 SPWPSLAWP*PLGCTPSRS 281
>gb|CN819555.1|CN819555 HRO4401_E07_I13ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4401_E07_I13, mRNA
sequence
Length = 504
Score = 144 bits (310), Expect(3) = 6e-039
Identities = 61/67 (91%), Positives = 63/67 (94%)
Frame = -1 / +2
Query: 375 MMDEYLVGEIDAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAILGLAVAVRMY 196
MMDEY VGEIDA TIPTKVKY PPKQPHYNQDKT EF+IKILQFLVPLAILGLAVAVR+Y
Sbjct: 2 MMDEYYVGEIDATTIPTKVKYAPPKQPHYNQDKTPEFIIKILQFLVPLAILGLAVAVRIY 181
Query: 195 TKSESA* 175
TKSESA*
Sbjct: 182 TKSESA* 202
Score = 128 bits (275), Expect = 7e-031
Identities = 57/67 (85%), Positives = 59/67 (88%)
Frame = +2 / -1
Query: 176 *ADSDLVYILTATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISP 355
*ADSDLV I TATARPSIA+GT+NWRILM NS VLSWL*CGCLGG Y TLVGIV ASISP
Sbjct: 201 *ADSDLV*IRTATARPSIAKGTRNWRILMMNSGVLSWL*CGCLGGAYLTLVGIVVASISP 22
Query: 356 TKYSSII 376
T YSSII
Sbjct: 21 T*YSSII 1
Score = 108 bits (231), Expect = 8e-025
Identities = 45/67 (67%), Positives = 49/67 (73%)
Frame = +3 / -2
Query: 174 TRQIPTWCTSLQRRPDPVLRGGPKTGGS**RTPGSCPGCSAAAWGACTSPWWVSWLHQSH 353
TRQ PTWC S++R+ PV G TGGS** T GSCPGCSAAAWGA T PWWVSW +S
Sbjct: 203 TRQTPTWCRSVRRQRGPVSPRGRGTGGS***TRGSCPGCSAAAWGART*PWWVSWWRRSR 24
Query: 354 PLSTRPS 374
STRPS
Sbjct: 23 RRSTRPS 3
Score = 104 bits (221), Expect = 2e-023
Identities = 45/68 (66%), Positives = 50/68 (73%)
Frame = -3 / +1
Query: 376 NDGRVLSG*D*CSHDTHQGEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSGRRCKDV 197
+DGRVL D HDTHQG+V APQAAALQPGQDP V HQDPPV P +TG R D+
Sbjct: 1 DDGRVLRRRDRRHHDTHQGQVRAPQAAALQPGQDPRVHHQDPPVPRPLGDTGPRCRRTDL 180
Query: 196 HQVGICLV 173
HQVG+CLV
Sbjct: 181 HQVGVCLV 204
Score = 40.0 bits (81), Expect(2) = 6e-006
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +1 / -3
Query: 175 LGRFRLGVHPYSDGQTQYCEGDQK 246
LGR RLGV PY D + QY +GD++
Sbjct: 202 LGRLRLGVDPYGDSEAQYRQGDEE 131
Score = 26.7 bits (52), Expect(3) = 6e-039
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -3 / +3
Query: 199 VHQVGICLVSCHQRCKHNIIHKLNKLVLKC 110
+HQV +CLVS +Q I++ ++ + C
Sbjct: 291 LHQVRVCLVSLYQSVCRKIVN*ISLARIAC 380
Score = 24.0 bits (46), Expect(2) = 6e-006
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1 / -3
Query: 331 YRGCINLTH*VLVHH 375
YRG ++L VLVHH
Sbjct: 46 YRGGVDLADVVLVHH 2
Score = 22.1 bits (42), Expect(3) = 6e-039
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2 / +1
Query: 32 IFPSKKKKK 6
IFP KKKKK
Sbjct: 478 IFPKKKKKK 504
>gb|CN814880.1|CN814880 HRO4503_E04_J07ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4503_E04_J07, mRNA sequence
Length = 805
Score = 144 bits (308), Expect = 2e-035
Identities = 58/68 (85%), Positives = 65/68 (95%)
Frame = -1 / +1
Query: 378 AMMDEYLVGEIDAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAILGLAVAVRM 199
AM+DEY +G++DA+TIPT+ KYTPPKQPHYNQDKT EF+IKILQFLVPLAILGLAVAVRM
Sbjct: 472 AMLDEYYIGDVDASTIPTQTKYTPPKQPHYNQDKTPEFIIKILQFLVPLAILGLAVAVRM 651
Query: 198 YTKSESA* 175
YTKSESA*
Sbjct: 652 YTKSESA* 675
Score = 127 bits (271), Expect = 3e-030
Identities = 57/83 (68%), Positives = 62/83 (74%)
Frame = +2 / -3
Query: 173 D*ADSDLVYILTATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASIS 352
+*ADSDLVYILTATARP +ARGT+NWRILM NS VLSWL*CGC GGVYF VGIV AS S
Sbjct: 677 N*ADSDLVYILTATARPRMARGTRNWRILMMNSGVLSWL*CGCFGGVYFVWVGIVDASTS 498
Query: 353 PTKYSSIIARAVLLCPTSSKSSV 421
P YSS IA +S K +
Sbjct: 497 PI*YSSSIAEFFFFFFSSKKGMI 429
Score = 80.3 bits (169), Expect = 3e-016
Identities = 37/63 (58%), Positives = 39/63 (61%)
Frame = +3 / -1
Query: 186 PTWCTSLQRRPDPVLRGGPKTGGS**RTPGSCPGCSAAAWGACTSPWWVSWLHQSHPLST 365
PTWCTS + RP GG TGGS** T GSCPGCSAAA CTS VS H H ST
Sbjct: 664 PTWCTS*RLRPGQGWPGGQGTGGS***TQGSCPGCSAAASAGCTSSG*VSSTHPHHQYST 485
Query: 366 RPS 374
P+
Sbjct: 484 HPA 476
Score = 79.9 bits (168), Expect = 4e-016
Identities = 34/57 (59%), Positives = 39/57 (68%)
Frame = -3 / +3
Query: 343 CSHDTHQGEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSGRRCKDVHQVGICLV 173
C DT+ EVH +AAALQPGQDP V HQDPPV PP + GR DVHQVG+ L+
Sbjct: 507 CVDDTYPDEVHPAEAAALQPGQDP*VHHQDPPVPCPPGHPWPGRSR*DVHQVGVGLI 677
Score = 30.4 bits (60), Expect = 0.32
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1 / -2
Query: 175 LGRFRLGVHPYSDGQTQYCEGDQK 246
L R RLGVHP GQ + +GD++
Sbjct: 675 LSRLRLGVHPNGYGQAKDGQGDKE 604
Score = 25.8 bits (50), Expect = 7.7
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3 / +2
Query: 540 AWPPPRGCTP 569
AWP P GCTP
Sbjct: 629 AWP*PLGCTP 658
>gb|CN821066.1|CN821066 HRO4427_B06_D11ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4427_B06_D11, mRNA
sequence
Length = 420
Score = 119 bits (254), Expect(2) = 4e-030
Identities = 50/54 (92%), Positives = 52/54 (96%)
Frame = -1 / +3
Query: 336 TIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAILGLAVAVRMYTKSESA* 175
TIPTKVKY PPKQPHYNQDKT EF+IKILQFLVPLAILGLAVAVR+YTKSESA*
Sbjct: 12 TIPTKVKYAPPKQPHYNQDKTPEFIIKILQFLVPLAILGLAVAVRIYTKSESA* 173
Score = 107 bits (228), Expect = 2e-024
Identities = 46/54 (85%), Positives = 48/54 (88%)
Frame = +2 / -3
Query: 176 *ADSDLVYILTATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIV 337
*ADSDLV I TATARPSIA+GT+NWRILM NS VLSWL*CGCLGG Y TLVGIV
Sbjct: 172 *ADSDLV*IRTATARPSIAKGTRNWRILMMNSGVLSWL*CGCLGGAYLTLVGIV 11
Score = 96.4 bits (204), Expect = 4e-021
Identities = 39/55 (70%), Positives = 43/55 (78%)
Frame = -3 / +2
Query: 337 HDTHQGEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSGRRCKDVHQVGICLV 173
HDTHQG+V APQAAALQPGQDP V HQDPPV P +TG R D+HQVG+CLV
Sbjct: 11 HDTHQGQVRAPQAAALQPGQDPRVHHQDPPVPRPLGDTGPRCRRTDLHQVGVCLV 175
Score = 93.6 bits (198), Expect = 3e-020
Identities = 39/56 (69%), Positives = 42/56 (75%)
Frame = +3 / -1
Query: 174 TRQIPTWCTSLQRRPDPVLRGGPKTGGS**RTPGSCPGCSAAAWGACTSPWWVSWL 341
TRQ PTWC S++R+ PV G TGGS** T GSCPGCSAAAWGA T PWWVS L
Sbjct: 174 TRQTPTWCRSVRRQRGPVSPRGRGTGGS***TRGSCPGCSAAAWGART*PWWVSCL 7
Score = 40.0 bits (81), Expect = 4e-004
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +1 / -2
Query: 175 LGRFRLGVHPYSDGQTQYCEGDQK 246
LGR RLGV PY D + QY +GD++
Sbjct: 173 LGRLRLGVDPYGDSEAQYRQGDEE 102
Score = 26.7 bits (52), Expect(2) = 4e-030
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -3 / +1
Query: 199 VHQVGICLVSCHQRCKHNIIHKLNKLVLKC 110
+HQV +CLVS +Q I++ ++ + C
Sbjct: 262 LHQVRVCLVSLYQSVCRKIVN*ISLARIAC 351
>gb|CN819715.1|CN819715 HRO4403_C08_F15ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4403_C08_F15, mRNA
sequence
Length = 501
Score = 104 bits (222), Expect = 1e-023
Identities = 44/50 (88%), Positives = 47/50 (94%)
Frame = -1 / +1
Query: 324 KVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAILGLAVAVRMYTKSESA* 175
+VKY PKQPHYNQDKT EF+IKILQFLVPLAILGLAVAVR+YTKSESA*
Sbjct: 16 RVKYVAPKQPHYNQDKTPEFIIKILQFLVPLAILGLAVAVRIYTKSESA* 165
Score = 98.2 bits (208), Expect = 1e-021
Identities = 42/52 (80%), Positives = 44/52 (84%)
Frame = +2 / -2
Query: 170 RD*ADSDLVYILTATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTL 325
R *ADSDLV I TATARPSIA+GT+NWRILM NS VLSWL*CGCLG Y TL
Sbjct: 170 RH*ADSDLV*IRTATARPSIAKGTRNWRILMMNSGVLSWL*CGCLGATYLTL 15
Score = 91.3 bits (193), Expect = 1e-019
Identities = 37/52 (71%), Positives = 41/52 (78%)
Frame = -3 / +3
Query: 325 QGEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSGRRCKDVHQVGICLVS 170
QG+V PQAAALQPGQDP V HQDPPV P +TG RRC D+HQVG+CLVS
Sbjct: 15 QGQVCCPQAAALQPGQDPRVHHQDPPVPRPLGDTGPCRRCTDLHQVGVCLVS 170
Score = 86.8 bits (183), Expect = 3e-018
Identities = 36/52 (69%), Positives = 38/52 (73%)
Frame = +3 / -3
Query: 171 ETRQIPTWCTSLQRRPDPVLRGGPKTGGS**RTPGSCPGCSAAAWGACTSPW 326
+TRQ PTWC S+QRR PV G TGGS** T GSCPGCSAAAWG T PW
Sbjct: 169 DTRQTPTWCRSVQRRQGPVSPRGRGTGGS***TRGSCPGCSAAAWGQHT*PW 14
Score = 44.1 bits (90), Expect = 2e-005
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = +1 / -1
Query: 175 LGRFRLGVHPYSDGQTQYCEGDQK 246
LGR RLGV PYSDG+ QY +GD++
Sbjct: 165 LGRLRLGVDPYSDGKAQYRQGDEE 94
Score = 31.8 bits (63), Expect = 0.12
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -2 / +2
Query: 239 SPSQYWVWPSL*GCTPSRN 183
SP +YW PSL G TPSR+
Sbjct: 101 SPWRYWALPSLYGSTPSRS 157
>gb|L40147.1|ASTNRA Avena strigosa nitrate reductase gene, partial cds
Length = 273
Score = 73.5 bits (154), Expect = 3e-014
Identities = 25/57 (43%), Positives = 39/57 (68%)
Frame = -1 / +1
Query: 570 KVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDV 400
K +T+ EV KH ++D W+V+ G VY+ T FL+DHPGG D +L + D T++F+ +
Sbjct: 1 KQFTMSEVRKHGSQDSAWIVVHGHVYDCTAFLKDHPGGADSILINAGTDCTEEFDAI 171
>gb|CN817900.1|CN817900 HRO4462_C01_F02ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4462_C01_F02, mRNA sequence
Length = 623
Score = 30.9 bits (61), Expect = 0.23
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +3 / -1
Query: 402 HLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASSRPW 533
HL N H Q A HH Q + SHC C + S+ P+
Sbjct: 236 HLLNSSHHHLQSPVATHHSHQPSHHPSGSHCQTCHQVPQSNLPY 105
>gb|CN818381.1|CN818381 HRO4469_E03_J05ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4469_E03_J05, mRNA sequence
Length = 691
Score = 30.9 bits (61), Expect = 0.23
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +3 / -2
Query: 402 HLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASSRPW 533
HL N H Q A HH Q + SHC C + S+ P+
Sbjct: 294 HLLNSSHHHLQSPVATHHSHQPSHHPSGSHCQTCHQVPQSNLPY 163
>gb|CN818559.1|CN818559 HRO4457_H05_P09ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4457_H05_P09, mRNA sequence
Length = 825
Score = 30.9 bits (61), Expect = 0.23
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +3 / -2
Query: 402 HLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASSRPW 533
HL N H Q A HH Q + SHC C + S+ P+
Sbjct: 419 HLLNSSHHHLQSPVATHHSHQPSHHPSGSHCQTCHQVPQSNLPY 288
>gb|CN821420.1|CN821420 HRO4425_B05_C09ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4425_B05_C09, mRNA
sequence
Length = 461
Score = 30.9 bits (61), Expect = 0.23
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = -2 / +1
Query: 683 RLRRRGSTASSNSLQPAVLASASSTLTVNRGRRGCR 576
R RRR STA + + A A+A++T T R R CR
Sbjct: 181 RRRRRRSTARATRRRTATAAAAAATATELRRRVQCR 288
>gb|CN821468.1|CN821468 HRO4425_F10_K19ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4425_F10_K19, mRNA
sequence
Length = 857
Score = 28.1 bits (55), Expect(2) = 0.32
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -3 / +1
Query: 292 LQPGQDPGVRHQDPP 248
LQPG +RHQDPP
Sbjct: 181 LQPGGPQHLRHQDPP 225
Score = 21.7 bits (41), Expect(2) = 0.32
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -2 / +2
Query: 68 CETYVY*YKITSIFPSKKKKK 6
C Y Y + + +KKKKK
Sbjct: 515 CYCYFYMFSYFYVISAKKKKK 577
>gb|CN818958.1|CN818958 HRO4474_G01_N02ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4474_G01_N02, mRNA sequence
Length = 481
Score = 30.4 bits (60), Expect = 0.32
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +3 / -3
Query: 402 HLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASSRPW 533
HL N H Q A HH Q + + SHC C + S+ P+
Sbjct: 194 HLLNSSHHHLQSPGATHHSHQPNHHPSGSHCQTCHQVPQSNLPY 63
>gb|CN819956.1|CN819956 HRO4409_B04_C07ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4409_B04_C07, mRNA
sequence
Length = 771
Score = 29.9 bits (59), Expect = 0.44
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +3 / +2
Query: 330 VSWLHQSHPLSTRPSLHGQCCC 395
+ WLH + ++ P L CCC
Sbjct: 386 IGWLHLAEQVADLPELRQSCCC 451
>gb|CN820576.1|CN820576 HRO4415_A07_B13ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4415_A07_B13, mRNA
sequence
Length = 438
Score = 29.9 bits (59), Expect = 0.44
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +3 / -2
Query: 330 VSWLHQSHPLSTRPSLHGQCCC 395
+ WLH + ++ P L CCC
Sbjct: 188 IGWLHLAEQVADLPELRQSCCC 123
>gb|CN821237.1|CN821237 HRO4423_A08_B15ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4423_A08_B15, mRNA
sequence
Length = 520
Score = 29.9 bits (59), Expect = 0.44
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +3 / +1
Query: 330 VSWLHQSHPLSTRPSLHGQCCC 395
+ WLH + ++ P L CCC
Sbjct: 325 IGWLHLAEQVADLPELRQSCCC 390
>gb|AF140554.1|AF140554 Avena sativa DNA-binding protein WRKY1 (wrky1) mRNA, complete cds
Length = 2073
Score = 29.0 bits (57), Expect = 0.83
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +3 / -2
Query: 270 PGSCPGCSAAAWGACTSP 323
PG G +AAWG C P
Sbjct: 944 PGRSSGAGSAAWGGCACP 891
>emb|AJ010728.1|AFA010728 Avena fatua alpha-Amy2A gene, exons 1-4
Length = 3694
Score = 29.0 bits (57), Expect = 0.83
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +3 / -1
Query: 480 TWSHCTPCRR*RASSRPWCCAWPPPRGCTP 569
TW + CR R RPW P RG +P
Sbjct: 2722 TWPAWSRCRGCRRR*RPWRATTPSRRGLSP 2633
>gb|BQ548073.1|BQ548073 CDO57-5 CDO Avena sativa cDNA clone CDO57 5', mRNA sequence
Length = 441
Score = 28.6 bits (56), Expect = 1.1
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -3 / -1
Query: 292 LQPGQDPGVRHQDPP 248
LQPG +RHQDPP
Sbjct: 375 LQPGGSQHLRHQDPP 331
>gb|CN816040.1|CN816040 HRO4516_C03_F06ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4516_C03_F06, mRNA sequence
Length = 720
Score = 28.6 bits (56), Expect = 1.1
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -3 / +3
Query: 292 LQPGQDPGVRHQDPP 248
LQPG +RHQDPP
Sbjct: 288 LQPGGSQHLRHQDPP 332
>gb|CN816463.1|CN816463 HRO4521_A05_A09ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4521_A05_A09, mRNA sequence
Length = 815
Score = 28.6 bits (56), Expect = 1.1
Identities = 13/37 (35%), Positives = 15/37 (40%)
Frame = +3 / +3
Query: 456 RLQGDPPETWSHCTPCRR*RASSRPWCCAWPPPRGCT 566
R G E W C R S+ PW A P GC+
Sbjct: 594 RSSGSSTERWGSCLSTRVPFLSNWPWRVALIPLEGCS 704
>gb|AM071411.1|AM071411 AM071411 Avena sativa leaf 3 weeks old, post-germination Avena
sativa cDNA clone ASCID1-1_019_a09, mRNA sequence
Length = 579
Score = 24.0 bits (46), Expect(2) = 1.3
Identities = 12/44 (27%), Positives = 15/44 (34%)
Frame = +3 / -3
Query: 408 RNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASSRPWCC 539
R R PW+ + G W RR R + R CC
Sbjct: 523 RRRRRCPWRRRHGGRGPAPGKEGAAWPAWASARRRRTTPRCCCC 392
Score = 23.1 bits (44), Expect(2) = 1.3
Identities = 8/21 (38%), Positives = 10/21 (47%)
Frame = +3 / -3
Query: 516 ASSRPWCCAWPPPRGCTPWIP 578
A S+P P P PW+P
Sbjct: 127 ARSQPQTVPPPSPTSSAPWLP 65
>gb|CN180767.1|CN180767 As02_cdo1090_C ITEC CDO Oat cDNA Library Avena sativa cDNA clone
As02_cdo1090, mRNA sequence
Length = 678
Score = 28.1 bits (55), Expect = 1.6
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -3 / +1
Query: 292 LQPGQDPGVRHQDPP 248
LQPG +RHQDPP
Sbjct: 298 LQPGGPQHLRHQDPP 342
>gb|CN814756.1|CN814756 HRO4502_B07_C14ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4502_B07_C14, mRNA sequence
Length = 620
Score = 28.1 bits (55), Expect = 1.6
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3 / +2
Query: 279 CPGCSAAAWGACTSP 323
C SA +W ACTSP
Sbjct: 164 CTASSARSWAACTSP 208
>gb|CN815677.1|CN815677 HRO4514_C10_E20ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4514_C10_E20, mRNA sequence
Length = 700
Score = 28.1 bits (55), Expect = 1.6
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = +3 / +1
Query: 276 SCPGCSAAAWGACTSPWWVSWLHQSHPLSTRPSLHGQCCC 395
+CP S++ + WW + H S H QCCC
Sbjct: 154 ACPSSSSSCSCSPEQWWWHHEWNWVHYCSGYGFWHWQCCC 273
>gb|CN816064.1|CN816064 HRO4516_E06_J12ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4516_E06_J12, mRNA sequence
Length = 715
Score = 28.1 bits (55), Expect = 1.6
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = +3 / -2
Query: 288 CSAAAWGACTSPWWVSWLHQSHPLSTRPSLHGQCC 392
C+ A+W CTS SW S S CC
Sbjct: 387 CAFASWAWCTSSSCASWRLPSDGAPGEASTPSGCC 283
>gb|CN816672.1|CN816672 HRO4523_D12_H23ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4523_D12_H23, mRNA sequence
Length = 874
Score = 28.1 bits (55), Expect = 1.6
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +3 / -2
Query: 516 ASSRPWCCAWPPPRGCTPW 572
A +P WPPP +PW
Sbjct: 681 APMKPTARPWPPPASASPW 625
>gb|CN821434.1|CN821434 HRO4425_C07_E13ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4425_C07_E13, mRNA
sequence
Length = 435
Score = 28.1 bits (55), Expect = 1.6
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +2 / -1
Query: 296 GCLGGVYFTLVGIVAASISPTKYSSIIARAVLLCPTSSKSSVASLA 433
G L ++ T ++ + SSI+ R V +CP+SS + LA
Sbjct: 159 GSLASIW*TTPYWKMKNLKLSMVSSILPRKVWICPSSSSHQASQLA 22
>gb|AY618695.1| Avena clauda strain CAV5566/1 beta-amyrin synthase gene, complete
cds
Length = 2274
Score = 28.1 bits (55), Expect = 1.6
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -3 / -1
Query: 187 GICLVSCHQRCKHNIIHKLNKLVLKCCKD 101
GI + S HQR ++++ L L+ CC++
Sbjct: 318 GILM*SSHQRSVYSLVSDLCTLIKLCCRN 232
>gb|CN819560.1|CN819560 HRO4401_F01_K01ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4401_F01_K01, mRNA
sequence
Length = 696
Score = 27.6 bits (54), Expect = 2.2
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3 / +2
Query: 516 ASSRPWCCAWP 548
ASS WCC WP
Sbjct: 464 ASSTLWCCEWP 496
>gb|CN819960.1|CN819960 HRO4409_B12_C23ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4409_B12_C23, mRNA
sequence
Length = 430
Score = 27.6 bits (54), Expect = 2.2
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3 / -3
Query: 519 SSRPWCCAWPPPRGCT 566
SS PWCC P RG T
Sbjct: 329 SSTPWCCDIPGYRGYT 282
>gb|L39777.1|ASTRASTL4A Avena sativa thaumatin-like pathogenesis-related protein (rastl-4)
mRNA, complete cds
Length = 744
Score = 27.6 bits (54), Expect = 2.2
Identities = 10/29 (34%), Positives = 10/29 (34%)
Frame = +3 / -3
Query: 474 PETWSHCTPCRR*RASSRPWCCAWPPPRG 560
P P R PW WPPP G
Sbjct: 259 PHILPELVPAGTLRVHVWPWSSCWPPPTG 173
>gb|BE439337.1|BE439337 CDO1313_WHE05F12F ITEC CDO Oat cDNA Library Avena sativa cDNA clone
CDO1313_WHE05, mRNA sequence
Length = 416
Score = 27.2 bits (53), Expect = 3.0
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -3 / -2
Query: 493 QCDQVSGGSPWRR*CSAVFHCQGCY 419
Q DQV P *C+ FHCQ Y
Sbjct: 145 QNDQVREDDPQVP*CNFKFHCQDLY 71
>gb|CN815350.1|CN815350 HRO4508_F12_L24ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4508_F12_L24, mRNA sequence
Length = 540
Score = 27.2 bits (53), Expect = 3.0
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +3 / +1
Query: 9 FFFF*RKNRSDFILIDVRLTRQQRLKFQN 95
FFFF + RS ++ L Q ++KF++
Sbjct: 19 FFFFFLRRRSIMFIVSPSLVSQAKIKFEH 105
>gb|CN815989.1|CN815989 HRO4515_F08_L15ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4515_F08_L15, mRNA sequence
Length = 809
Score = 27.2 bits (53), Expect = 3.0
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3 / +2
Query: 477 ETWSHCTPCRR*RASSRPWCCAW 545
E +C+P R R S P CC W
Sbjct: 350 EATPNCSPSRPSRLSRPPRCCWW 418
>gb|CN818147.1|CN818147 HRO4471_E04_I07ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4471_E04_I07, mRNA sequence
Length = 357
Score = 27.2 bits (53), Expect = 3.0
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -1 / +2
Query: 663 HSKQQQLAAGSPRLRLLHPDRQQRKTR 583
H ++ +L P RLLHP Q++ R
Sbjct: 41 HRRRPRLGIHRPHRRLLHPRHHQQRIR 121
>gb|CN820179.1|CN820179 HRO4412_A09_B18ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4412_A09_B18, mRNA
sequence
Length = 547
Score = 27.2 bits (53), Expect = 3.0
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3 / -1
Query: 6 FFFFF*RKNRSDFILIDVRLT 68
FFFFF R+ +SDF ++ +T
Sbjct: 547 FFFFFFRERKSDFFVM*SNIT 485
>gb|CN820746.1|CN820746 HRO4414_C01_E02ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4414_C01_E02, mRNA
sequence
Length = 370
Score = 27.2 bits (53), Expect = 3.0
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -3 / +1
Query: 493 QCDQVSGGSPWRR*CSAVFHCQGCY 419
Q DQV P *C+ FHCQ Y
Sbjct: 244 QNDQVREDDPQVP*CNFKFHCQDLY 318
>dbj|AB076980.1| Avena sativa AsHHT1 mRNA for hydroxyanthranilate
hydroxycinnamoyltransferase 1, complete cds
Length = 1755
Score = 27.2 bits (53), Expect = 3.0
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +3 / +3
Query: 507 R*RASSRPWCCAWPPPRGCTPWIPT 581
R R +R W C PRGC PT
Sbjct: 135 RSRCGARRWWCRRRRPRGCVCGTPT 209
>gb|BE439280.1|BE439280 CDO203_WHE04E11F ITEC CDO Oat cDNA Library Avena sativa cDNA clone
CDO203_WHE04E11, mRNA sequence
Length = 389
Score = 23.1 bits (44), Expect(2) = 3.8
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -3 / -3
Query: 274 PGVRHQDPP 248
P +RHQDPP
Sbjct: 381 PTLRHQDPP 355
Score = 21.7 bits (41), Expect(2) = 3.8
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -2 / -1
Query: 68 CETYVY*YKITSIFPSKKKKK 6
C Y Y + + +KKKKK
Sbjct: 65 CYCYFYMFSYFYVISAKKKKK 3
>gb|CN816924.1|CN816924 HRO4526_C09_E18ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4526_C09_E18, mRNA sequence
Length = 776
Score = 23.5 bits (45), Expect(2) = 4.0
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +3 / +2
Query: 300 AWGACTSPWWVS 335
+W C +PWW S
Sbjct: 350 SWW*C*APWWAS 385
Score = 22.1 bits (42), Expect(2) = 4.0
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +3 / +2
Query: 3 VFFFFF*RK 29
VFFFFF*R+
Sbjct: 11 VFFFFF*RR 37
>gb|CN816108.1|CN816108 HRO4517_A12_A23ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4517_A12_A23, mRNA sequence
Length = 906
Score = 26.7 bits (52), Expect = 4.1
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3 / +3
Query: 214 RRCKDVHQVGICLVSCHQRCKHNIIH 137
RR KDV +GIC RC+ ++H
Sbjct: 165 RRSKDVQVLGIC*CG*F*RCQVRLLH 242
>gb|CN816341.1|CN816341 HRO4519_F05_L09ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4519_F05_L09, mRNA sequence
Length = 249
Score = 26.7 bits (52), Expect = 4.1
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -3 / +2
Query: 199 VHQVGICLVSCHQRCKHNIIHKLNKLVLKC 110
+HQV +CLVS +Q I++ ++ + C
Sbjct: 65 LHQVRVCLVSLYQSVCRKIVN*ISLARIAC 154
>gb|CN816373.1|CN816373 HRO4520_A03_B06ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4520_A03_B06, mRNA sequence
Length = 483
Score = 26.7 bits (52), Expect = 4.1
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = -1 / +2
Query: 462 GGDDVLLSSTAKDATDDFEDVGHSSTARAMMDEYLVGEIDAATIPTKVKYT 310
G D V LS+ +K VG + ++ +L G IDA + K+T
Sbjct: 128 GSDTVSLSAPSKPTFHGRNSVGTNLGITSI*QVHLTGSIDACLTQKRWKFT 280
>gb|CN816836.1|CN816836 HRO4525_D02_G03ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4525_D02_G03, mRNA sequence
Length = 661
Score = 26.7 bits (52), Expect = 4.1
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -2 / -2
Query: 683 RLRRRGSTASSNSLQPAVLASASSTLTVNR 594
RLRR STA+S+ L +AS+ S L + R
Sbjct: 438 RLRRVASTATSDILGNQQMASSVSVLELGR 349
>gb|CN817309.1|CN817309 HRO4458_D03_H06ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4458_D03_H06, mRNA sequence
Length = 675
Score = 26.7 bits (52), Expect = 4.1
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -3 / +3
Query: 223 GSGRRCKDVHQVGICL 176
GS R CK VH+ GI L
Sbjct: 102 GSARSCKKVHKQGIAL 149
>gb|CN818979.1|CN818979 HRO4474_E10_J20ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4474_E10_J20, mRNA sequence
Length = 799
Score = 26.7 bits (52), Expect = 4.1
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3 / -3
Query: 6 FFFFF*RKNRSDFILIDVRLTRQQRLK 86
FFFFF*+KN S I + LT + L+
Sbjct: 698 FFFFF*QKNTSFTQNITIHLTECKSLQ 618
>gb|CN818997.1|CN818997 HRO4474_D04_H08ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4474_D04_H08, mRNA sequence
Length = 645
Score = 26.7 bits (52), Expect = 4.1
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3 / -1
Query: 271 GVRHQDPPVFGPPRNTGSGRRC 206
GVR PP FGP S R C
Sbjct: 213 GVRLTGPPWFGPHLQFSSSRNC 148
>gb|CN819661.1|CN819661 HRO4402_G01_M02ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4402_G01_M02, mRNA
sequence
Length = 643
Score = 26.7 bits (52), Expect = 4.1
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -3 / -1
Query: 598 TEEDEDVGIQGVHPRGGGQAQHQGRLLARHRRQ 500
++E+E + + G+H G G + RLL R+Q
Sbjct: 379 SDEEEGMVVSGLHAEGQGNSGGLARLLEVARQQ 281
Score = 25.8 bits (50), Expect = 7.7
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +3 / -2
Query: 3 VFFFFF*RKNRSDFI 47
VFFFFF* +NRS +
Sbjct: 621 VFFFFF*LQNRSTIL 577
>gb|CN821159.1|CN821159 HRO4428_B08_D16ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4428_B08_D16, mRNA
sequence
Length = 755
Score = 26.7 bits (52), Expect = 4.1
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3 / -2
Query: 193 QVGICLVSCHQRCKHNII 140
QVG CL S HQ C N++
Sbjct: 139 QVGRCLPSLHQSCFLNVL 86
>gb|CN818626.1|CN818626 HRO4455_A03_A05ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4455_A03_A05, mRNA sequence
Length = 410
Score = 22.1 bits (42), Expect(2) = 5.4
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -3 / -2
Query: 196 HQVGICLVSCHQR 158
HQVG L SC R
Sbjct: 43 HQVGFVLASCSPR 5
Score = 22.1 bits (42), Expect(2) = 5.4
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = -2 / -3
Query: 470 ITLEAMMFCCLPLPRMLPM 414
+T+ CC PR+LP+
Sbjct: 96 VTV*DQQVCCYQRPRLLPI 40
>gb|CN816588.1|CN816588 HRO4522_E05_I10ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4522_E05_I10, mRNA sequence
Length = 852
Score = 26.3 bits (51), Expect = 5.6
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -3 / -3
Query: 286 PGQDPGVRHQDPPVFG 239
P D G+RH +PP+ G
Sbjct: 442 PAVDKGLRHGNPPIVG 395
>gb|CN817303.1|CN817303 HRO4464_H08_O16ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4464_H08_O16, mRNA sequence
Length = 424
Score = 26.3 bits (51), Expect = 5.6
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = -3 / +1
Query: 307 PQAAALQPGQDPGVRHQDPPVFGPPRNTGSGRRCKDVHQVGICLVSCHQR 158
P+ A L PG H+ P+ PPR R+ + HQ + L H+R
Sbjct: 94 PRHARLPGYVPPGHLHRRRPLPEPPRPPLRPRQQQHPHQPQVPLGRMHRR 243
>gb|CN817353.1|CN817353 HRO4458_C06_F12ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4458_C06_F12, mRNA sequence
Length = 542
Score = 26.3 bits (51), Expect = 5.6
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +3 / -2
Query: 549 PPRGCTPWIP 578
PPR C+PW P
Sbjct: 127 PPRRCSPWTP 98
>gb|CN817974.1|CN817974 HRO4460_G05_M10ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4460_G05_M10, mRNA sequence
Length = 457
Score = 26.3 bits (51), Expect = 5.6
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +3 / +3
Query: 486 SHCTPCRR*RASSRPWCCA 542
+ C P R R RPW CA
Sbjct: 279 TRCAPTERARTHVRPW*CA 335
>gb|CN818042.1|CN818042 HRO4472_D06_G12ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4472_D06_G12, mRNA sequence
Length = 620
Score = 26.3 bits (51), Expect = 5.6
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +3 / -3
Query: 549 PPRGCTPWIP 578
PPR C+PW P
Sbjct: 138 PPRRCSPWTP 109
>gb|CN818100.1|CN818100 HRO4471_H07_O13ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4471_H07_O13, mRNA sequence
Length = 376
Score = 26.3 bits (51), Expect = 5.6
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -1 / +3
Query: 663 HSKQQQLAAGSPRLRLLHPDRQQRKTR 583
H ++ ++ P RLLHP Q++ R
Sbjct: 87 HRRRPRMGIHRPHRRLLHPRHHQQRIR 167
>gb|CN818275.1|CN818275 HRO4470_C10_F20ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4470_C10_F20, mRNA sequence
Length = 387
Score = 26.3 bits (51), Expect = 5.6
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -1 / +2
Query: 663 HSKQQQLAAGSPRLRLLHPDRQQRKTR 583
H ++ ++ P RLLHP Q++ R
Sbjct: 98 HRRRPRMGIHRPHRRLLHPRHHQQRIR 178
>gb|CN818335.1|CN818335 HRO4457_B03_D05ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4457_B03_D05, mRNA sequence
Length = 395
Score = 26.3 bits (51), Expect = 5.6
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = -3 / +2
Query: 307 PQAAALQPGQDPGVRHQDPPVFGPPRNTGSGRRCKDVHQVGICLVSCHQR 158
P+ A L PG H+ P+ PPR R+ + HQ + L H+R
Sbjct: 83 PRHARLPGYVPPGHLHRRRPLPEPPRPPLRPRQQQHPHQPQVPLGRMHRR 232
>gb|CN818377.1|CN818377 HRO4469_D10_H19ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green
leaf Avena sativa cDNA clone HRO4469_D10_H19, mRNA
sequence
Length = 778
Score = 26.3 bits (51), Expect = 5.6
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -2 / -1
Query: 41 ITSIFPSKKKKKN 3
IT+I+ SKKKKKN
Sbjct: 73 ITNIYQSKKKKKN 35
>gb|CN818631.1|CN818631 HRO4467_D05_G09ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4467_D05_G09, mRNA sequence
Length = 464
Score = 26.3 bits (51), Expect = 5.6
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -1 / +2
Query: 663 HSKQQQLAAGSPRLRLLHPDRQQRKTR 583
H ++ ++ P RLLHP Q++ R
Sbjct: 155 HRRRPRMGIHRPHRRLLHPRNHQQRIR 235
>gb|CN818927.1|CN818927 HRO4474_H10_P20ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4474_H10_P20, mRNA sequence
Length = 381
Score = 26.3 bits (51), Expect = 5.6
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +3 / -1
Query: 501 CRR*RASSRPWCCAWPPPRGC 563
C R S PW A PP GC
Sbjct: 177 CSSTRRRSSPWRTAPPPDNGC 115
>gb|CN820831.1|CN820831 HRO4420_D04_H08ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4420_D04_H08, mRNA
sequence
Length = 754
Score = 26.3 bits (51), Expect = 5.6
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = +3 / -2
Query: 321 PWWVSWLH 344
PWW WLH
Sbjct: 159 PWWFDWLH 136
>gb|CN821481.1|CN821481 HRO4425_G11_M21ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4425_G11_M21, mRNA
sequence
Length = 483
Score = 26.3 bits (51), Expect = 5.6
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -2 / -2
Query: 665 STASSNSLQPAVLASASSTLT 603
S ASS S +PA+ ASASS+ T
Sbjct: 218 SCASSPSTRPALKASASSSST 156
>gb|AY083680.1| Avena sativa clone OP9 receptor kinase gene cluster, complete
sequence
Length = 10607
Score = 26.3 bits (51), Expect = 5.6
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +3 / +3
Query: 363 TRPSLHGQCCCAPHLRNHR*HPW 431
T S G+CC H NHR W
Sbjct: 4875 TLSSAKGRCCSLLHCHNHRT*RW 4943
>dbj|AB076982.1| Avena sativa AsHHT3 mRNA for hydroxyanthranilate
hydroxycinnamoyltransferase 3, complete cds
Length = 1659
Score = 26.3 bits (51), Expect = 5.6
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +3 / +2
Query: 507 R*RASSRPWCCAWPPPRGCTPWIPT 581
R R +R W C PRGC PT
Sbjct: 11 RSRCGARRWWCRRRRPRGCGCGTPT 85
>gb|CN816102.1|CN816102 HRO4517_A06_A11ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4517_A06_A11, mRNA sequence
Length = 822
Score = 23.1 bits (44), Expect(2) = 5.6
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +3 / +3
Query: 354 PLSTRPSLHGQCCCAP 401
P +R S HGQ C P
Sbjct: 567 PYGSRGSGHGQAACLP 614
Score = 22.1 bits (42), Expect(2) = 5.6
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3 / +1
Query: 6 FFFFF*RKN 32
FFFFF RKN
Sbjct: 10 FFFFFGRKN 36
>gb|CN814734.1|CN814734 HRO4501_H08_O15ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4501_H08_O15, mRNA sequence
Length = 312
Score = 25.8 bits (50), Expect = 7.7
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -3 / -3
Query: 190 VGICLVSCHQRCKHNI 143
+ IC CHQ+ HN+
Sbjct: 124 IHICTAGCHQQSTHNL 77
>gb|CN815923.1|CN815923 HRO4515_A01_B01ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4515_A01_B01, mRNA sequence
Length = 566
Score = 25.8 bits (50), Expect = 7.7
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = +3 / +1
Query: 303 WGACTSPWWVSWLHQSH 353
W C +WVSW S+
Sbjct: 349 WSFCVDGYWVSWFCYSY 399
>gb|CN816921.1|CN816921 HRO4526_C06_E12ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4526_C06_E12, mRNA sequence
Length = 828
Score = 25.8 bits (50), Expect = 7.7
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2 / +3
Query: 104 RSLILKLESLLSCETYVY*YKITSIFPS 21
R+L+L+ SLL T Y IT+ FPS
Sbjct: 465 RNLVLRHPSLLKNMTLPYLRDITTTFPS 548
>gb|CN817685.1|CN817685 HRO4461_G09_N17ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4461_G09_N17, mRNA sequence
Length = 625
Score = 25.8 bits (50), Expect = 7.7
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -2 / +1
Query: 683 RLRRRGSTASSNSLQPAVLASASSTLTVNRGRRG 582
R RRR STA + + A A+A++T T R G
Sbjct: 304 RRRRRRSTARATRRRTATAAAAAATATELRRPAG 405
>gb|CN818365.1|CN818365 HRO4457_B09_D17ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4457_B09_D17, mRNA sequence
Length = 351
Score = 25.8 bits (50), Expect = 7.7
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +3 / -3
Query: 501 CRR*RASSRPWCCAWPPPRGC 563
C R S PW A PP GC
Sbjct: 178 CSSTRQRSSPWRTAPPPGNGC 116
>gb|CN818419.1|CN818419 HRO4469_B06_D11ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4469_B06_D11, mRNA sequence
Length = 287
Score = 25.8 bits (50), Expect = 7.7
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -3 / +2
Query: 271 GVRHQDPPVFGPPRNTGSGRRCKDVHQVGICLVSCHQR 158
G RH+ P+ PPR R+ + HQ + L H+R
Sbjct: 2 GTRHRRRPLPEPPRPPLRPRQQQHPHQPQVPLGRMHRR 115
>gb|CN818716.1|CN818716 HRO4468_A05_A10ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4468_A05_A10, mRNA sequence
Length = 778
Score = 25.8 bits (50), Expect = 7.7
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2 / +1
Query: 104 RSLILKLESLLSCETYVY*YKITSIFPS 21
R+L+L+ SLL T Y IT+ FPS
Sbjct: 370 RNLVLRHPSLLKNMTLPYLRDITTTFPS 453
>gb|CN818885.1|CN818885 HRO4473_D05_XXXZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4473_D05_XXX, mRNA sequence
Length = 772
Score = 25.8 bits (50), Expect = 7.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3 / -2
Query: 357 LSTRPSLHGQCCCAPHLR 410
++T LH Q CC PH +
Sbjct: 261 ITTCHELHHQLCCKPHTK 208
>gb|CN819739.1|CN819739 HRO4403_E10_J19ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4403_E10_J19, mRNA
sequence
Length = 833
Score = 25.8 bits (50), Expect = 7.7
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2 / +3
Query: 104 RSLILKLESLLSCETYVY*YKITSIFPS 21
R+L+L+ SLL T Y IT+ FPS
Sbjct: 447 RNLVLRHPSLLKNMTLPYLRDITTTFPS 530
>gb|CN819904.1|CN819904 HRO4407_F05_L09ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4407_F05_L09, mRNA
sequence
Length = 785
Score = 25.8 bits (50), Expect = 7.7
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3 / -3
Query: 6 FFFFF*RKNRSDFILIDVRLTRQ 74
FFFF + N +DF ++ +R T Q
Sbjct: 765 FFFFCSKANSADF*ILYIRFTLQ 697
>gb|CN820953.1|CN820953 HRO4421_H02_O03ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4421_H02_O03, mRNA
sequence
Length = 706
Score = 25.8 bits (50), Expect = 7.7
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -2 / +3
Query: 134 TE*VSVKMLQRSLILKLESLLSCETYVY*YKITSIFPSKKKKK 6
T+ V +++L L+ L L C+ V + + SKKKKK
Sbjct: 576 TDKVIIRLLHSPLLNLLPIYLFCKRSVCNCNLNFVVSSKKKKK 704
>gb|CN821295.1|CN821295 HRO4423_G02_N03ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4423_G02_N03, mRNA
sequence
Length = 624
Score = 25.8 bits (50), Expect = 7.7
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2 / +2
Query: 104 RSLILKLESLLSCETYVY*YKITSIFPS 21
R+L+L+ SLL T Y IT+ FPS
Sbjct: 176 RNLVLRHPSLLKNMTLPYLRDITTTFPS 259
>gb|CN821522.1|CN821522 HRO4426_C06_E12ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4426_C06_E12, mRNA
sequence
Length = 703
Score = 25.8 bits (50), Expect = 7.7
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2 / +2
Query: 104 RSLILKLESLLSCETYVY*YKITSIFPS 21
R+L+L+ SLL T Y IT+ FPS
Sbjct: 530 RNLVLRHPSLLKNMTLPYLRDITTTFPS 613
>gb|CN817794.1|CN817794 HRO4461_B02_D03ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4461_B02_D03, mRNA sequence
Length = 499
Score = 22.1 bits (42), Expect(2) = 8.6
Identities = 7/18 (38%), Positives = 8/18 (44%)
Frame = +3 / -3
Query: 489 HCTPCRR*RASSRPWCCA 542
H +PCR WC A
Sbjct: 122 HVSPCRAAAPGGELWCSA 69
Score = 21.7 bits (41), Expect(2) = 8.6
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +3 / -1
Query: 366 RPSLHGQCCCAPHLRNHR*HPW 431
R S G+C C+ R+H P+
Sbjct: 256 RSSCGGRCGCSSDRRSHTEDPY 191
>gb|CN821013.1|CN821013 HRO4422_E09_I18ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4422_E09_I18, mRNA
sequence
Length = 310
Score = 24.9 bits (48), Expect(2) = 8.8
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = +3 / -2
Query: 516 ASSRPWCCAWPPPRGCTPWIPT 581
A S P C PP C W P+
Sbjct: 237 AGSAPHCAPCPPRGRCRRWRPS 172
Score = 17.1 bits (31), Expect(2) = 8.8
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = +3 / -2
Query: 351 HPLSTRPSLHGQCCCAPH 404
H STRP APH
Sbjct: 273 HVPSTRPGSRR*AGSAPH 220
>gb|U20000.1|AFU20000 Avena fatua nondormancy-associated clone AFN3 putative ORF1 mRNA,
partial cds
Length = 546
Score = 22.1 bits (42), Expect(2) = 9.4
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +3 / -3
Query: 168 QETRQIPTWC 197
++TRQ P WC
Sbjct: 112 RQTRQSPRWC 83
Score = 21.7 bits (41), Expect(2) = 9.4
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = +3 / -2
Query: 270 PGSCPGCSAAAWGACTSPW 326
PGSCP +SPW
Sbjct: 83 PGSCPPNWLQGKARISSPW 27
Database: Avena_nucl_with_EST.fasta
Posted date: May 2, 2006 2:37 PM
Number of letters in database: 4,702,463
Number of sequences in database: 8143
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 8,817,372
Number of Sequences: 8143
Number of extensions: 152044
Number of successful extensions: 2235
Number of sequences better than 10.0: 90
length of database: 1,567,487
effective HSP length: 42
effective length of database: 1,225,481
effective search space used: 226713985
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)