TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.12
(694 letters)
Database: Avena_nucl_with_EST.fasta
8143 sequences; 4,702,463 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN815219.1|CN815219 HRO4507_C01_F01ZS5 Lib AA071E1X Aven... 208 1e-054
gb|CN817060.1|CN817060 HRO4527_G09_N17ZS5 Lib AA071E1X Aven... 208 1e-054
gb|CN820741.1|CN820741 HRO4414_B07_C14ZS5 Lib AA069E1X Aven... 208 1e-054
gb|CN815929.1|CN815929 HRO4515_A08_B15ZS5 Lib AA071E1X Aven... 206 3e-054
gb|CN821624.1|CN821624 HRO4408_D06_H12ZS5 Lib AA069E1X Aven... 206 3e-054
gb|CN816090.1|CN816090 HRO4516_H02_P04ZS5 Lib AA071E1X Aven... 204 9e-054
gb|CN817108.1|CN817108 HRO4528_C10_F20ZS5 Lib AA071E1X Aven... 157 2e-039
gb|CN815430.1|CN815430 HRO4509_F01_K01ZS5 Lib AA071E1X Aven... 117 2e-027
gb|CN816143.1|CN816143 HRO4517_E01_I01ZS5 Lib AA071E1X Aven... 93 2e-024
>gb|CN815219.1|CN815219 HRO4507_C01_F01ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4507_C01_F01, mRNA sequence
Length = 365
Score = 208 bits (448), Expect = 1e-054
Identities = 91/93 (97%), Positives = 93/93 (100%)
Frame = -3 / +3
Query: 458 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGEAAKLARYNKKPTITSRE 279
VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGE+AKLARYNKKPTITSRE
Sbjct: 69 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITSRE 248
Query: 278 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*I 180
IQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*+
Sbjct: 249 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*V 347
Score = 150 bits (322), Expect = 2e-037
Identities = 71/92 (77%), Positives = 72/92 (78%)
Frame = +1 / -2
Query: 184 *DDVNLVTALVPSETACLASSPGRTRRTEV*ISREVMVGFXXXXXXXXXXXXXXXKMSLM 363
*+DVN VTALVPSETACLASSPGRTRRTEV ISREVMVGF KMSLM
Sbjct: 343 *EDVNFVTALVPSETACLASSPGRTRRTEVWISREVMVGFLL*RASLADSPASFSKMSLM 164
Query: 364 KEFMMDMALEEMPMSGWTCFSTLKM*IL*VST 459
KEFMMDMALEEMPMSG TC TLKM*IL*VST
Sbjct: 163 KEFMMDMALEEMPMSGCTCLRTLKM*IL*VST 68
Score = 147 bits (316), Expect = 2e-036
Identities = 64/88 (72%), Positives = 73/88 (82%)
Frame = +3 / -1
Query: 180 NLR*CELSDGLGALRDSVLGELAGKDKANRGLNLPRGDGGLLVVARKLGSLAGELLEDVV 359
NLR C+L D LGAL D VLG+LAG+DKA+ GL+LP GDGGLLV+A +LG LA E L+DVV
Sbjct: 347 NLRGCKLCDSLGALGDRVLGKLAGEDKADGGLDLPGGDGGLLVIAGELGRLASEFLKDVV 168
Query: 360 DEGVHDGHGLGRDADVGVDLLQHLEDVD 443
DEGVHDGHGLG DADV V LL+ LEDVD
Sbjct: 167 DEGVHDGHGLGGDADVRVHLLEDLEDVD 84
Score = 84.9 bits (179), Expect(2) = 1e-023
Identities = 33/48 (68%), Positives = 38/48 (79%)
Frame = +2 / -3
Query: 185 KMM*T**RPWCPQRQRAWRARREGQGEQRFESPER*WWASCCSAQAWQ 328
K M*T *+PWCP+R RAW+ARR GQG +R SP R*WWASC S +AWQ
Sbjct: 342 KRM*TL*QPWCPRRPRAWQARRGGQGGRRSGSPGR*WWASCYSGRAWQ 199
Score = 71.2 bits (149), Expect(2) = 3e-022
Identities = 31/47 (65%), Positives = 34/47 (72%)
Frame = -2 / +2
Query: 327 CQACALQQEAHHHLSGDSNLCSPCPSRRARQARCL*GHQGRH*VHII 187
CQA L QEAHHHL GD +L PCP RRA QAR L GHQG H V+I+
Sbjct: 200 CQARPL*QEAHHHLPGDPDLRPPCPPRRACQARGLRGHQGCHKVYIL 340
Score = 48.3 bits (99), Expect(2) = 3e-022
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = -2 / +2
Query: 453 DLQDLHLQGAEAGPPRHRHLFQG 385
DLQDLHLQG +AG P HRHL QG
Sbjct: 74 DLQDLHLQGPQAGAPGHRHLLQG 142
Score = 39.6 bits (80), Expect(2) = 1e-023
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +2 / -3
Query: 374 *WTWPWKRCRCRG 412
*WTWPW+RCRC G
Sbjct: 153 *WTWPWRRCRCPG 115
>gb|CN817060.1|CN817060 HRO4527_G09_N17ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4527_G09_N17, mRNA sequence
Length = 412
Score = 208 bits (448), Expect = 1e-054
Identities = 92/92 (100%), Positives = 92/92 (100%)
Frame = -3 / +1
Query: 458 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGEAAKLARYNKKPTITSRE 279
VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGEAAKLARYNKKPTITSRE
Sbjct: 28 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGEAAKLARYNKKPTITSRE 207
Query: 278 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 183
IQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*
Sbjct: 208 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 303
Score = 155 bits (334), Expect = 5e-039
Identities = 72/91 (79%), Positives = 74/91 (81%)
Frame = +1 / -3
Query: 187 DDVNLVTALVPSETACLASSPGRTRRTEV*ISREVMVGFXXXXXXXXXXXXXXXKMSLMK 366
D+VNLVTALVPS+TACLASSPGRTRRTEV ISREVMVGF KMSLMK
Sbjct: 299 DEVNLVTALVPSDTACLASSPGRTRRTEVWISREVMVGFLL*RASLAASPASFSKMSLMK 120
Query: 367 EFMMDMALEEMPMSGWTCFSTLKM*IL*VST 459
EFMMDMALEEMPMSG TCFSTLKM*IL*VST
Sbjct: 119 EFMMDMALEEMPMSGCTCFSTLKM*IL*VST 27
Score = 152 bits (327), Expect = 5e-038
Identities = 68/88 (77%), Positives = 74/88 (84%)
Frame = +3 / -2
Query: 180 NLR*CELSDGLGALRDSVLGELAGKDKANRGLNLPRGDGGLLVVARKLGSLAGELLEDVV 359
+LR EL DGLGAL VLGELAG+DKA+ GL+LP GDGGLLVVAR+LG LA E L+DVV
Sbjct: 306 SLRRGELGDGLGAL*HGVLGELAGEDKADGGLDLPGGDGGLLVVARQLGGLASEFLKDVV 127
Query: 360 DEGVHDGHGLGRDADVGVDLLQHLEDVD 443
DEGVHDGHGLG DADV V LLQHLEDVD
Sbjct: 126 DEGVHDGHGLGGDADVRVHLLQHLEDVD 43
Score = 89.0 bits (188), Expect(2) = 6e-025
Identities = 35/50 (70%), Positives = 38/50 (76%)
Frame = +2 / -1
Query: 182 SKMM*T**RPWCPQRQRAWRARREGQGEQRFESPER*WWASCCSAQAWQP 331
S *T *RPWCP +RAWRARR GQG +R SP R*WWASCCSA AW+P
Sbjct: 304 STTR*TW*RPWCPLTRRAWRARRGGQGGRRSGSPGR*WWASCCSAPAWRP 155
Score = 83.1 bits (175), Expect(2) = 8e-027
Identities = 34/48 (70%), Positives = 38/48 (79%)
Frame = -2 / +3
Query: 330 GCQACALQQEAHHHLSGDSNLCSPCPSRRARQARCL*GHQGRH*VHII 187
G QA ALQQEAHHHL GD +L PCP RRARQAR + GHQGRH VH++
Sbjct: 156 GRQAGALQQEAHHHLPGDPDLRPPCPPRRARQARRVRGHQGRHQVHLV 299
Score = 51.9 bits (107), Expect(2) = 8e-027
Identities = 20/23 (86%), Positives = 20/23 (86%)
Frame = -2 / +3
Query: 453 DLQDLHLQGAEAGPPRHRHLFQG 385
DLQDLHLQGAEAG P HRHL QG
Sbjct: 33 DLQDLHLQGAEAGAPGHRHLLQG 101
Score = 39.6 bits (80), Expect(2) = 6e-025
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +2 / -1
Query: 374 *WTWPWKRCRCRG 412
*WTWPW+RCRC G
Sbjct: 112 *WTWPWRRCRCPG 74
>gb|CN820741.1|CN820741 HRO4414_B07_C14ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4414_B07_C14, mRNA
sequence
Length = 454
Score = 208 bits (448), Expect = 1e-054
Identities = 91/93 (97%), Positives = 93/93 (100%)
Frame = -3 / +1
Query: 458 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGEAAKLARYNKKPTITSRE 279
VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGE+AKLARYNKKPTITSRE
Sbjct: 13 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITSRE 192
Query: 278 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*I 180
IQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*+
Sbjct: 193 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*V 291
Score = 156 bits (335), Expect = 4e-039
Identities = 69/88 (78%), Positives = 75/88 (85%)
Frame = +3 / -2
Query: 180 NLR*CELSDGLGALRDSVLGELAGKDKANRGLNLPRGDGGLLVVARKLGSLAGELLEDVV 359
NLR CEL DGLGALRDSVLGEL +D+A+ GL+LP GDGGLLVVA +LG LA ELLEDVV
Sbjct: 291 NLRGCELCDGLGALRDSVLGELPWEDEADGGLDLPGGDGGLLVVAGQLGGLASELLEDVV 112
Query: 360 DEGVHDGHGLGRDADVGVDLLQHLEDVD 443
DEGVHDGHGLG DADV V LL+ LEDVD
Sbjct: 111 DEGVHDGHGLGGDADVRVHLLEDLEDVD 28
Score = 150 bits (322), Expect = 2e-037
Identities = 71/92 (77%), Positives = 72/92 (78%)
Frame = +1 / -3
Query: 184 *DDVNLVTALVPSETACLASSPGRTRRTEV*ISREVMVGFXXXXXXXXXXXXXXXKMSLM 363
*+DVN VTALVPSETACLASSPGRTRRTEV ISREVMVGF KMSLM
Sbjct: 287 *EDVNFVTALVPSETACLASSPGRTRRTEVWISREVMVGFLL*RASLADSPASFSKMSLM 108
Query: 364 KEFMMDMALEEMPMSGWTCFSTLKM*IL*VST 459
KEFMMDMALEEMPMSG TC TLKM*IL*VST
Sbjct: 107 KEFMMDMALEEMPMSGCTCLRTLKM*IL*VST 12
Score = 87.2 bits (184), Expect(2) = 2e-024
Identities = 34/48 (70%), Positives = 37/48 (77%)
Frame = +2 / -1
Query: 185 KMM*T**RPWCPQRQRAWRARREGQGEQRFESPER*WWASCCSAQAWQ 328
K M*T *RPWCPQRQRAWRA G+G +R SP R*WWASCCS AW+
Sbjct: 286 KRM*TL*RPWCPQRQRAWRAPLGGRGGRRSGSPGR*WWASCCSGPAWR 143
Score = 80.3 bits (169), Expect(2) = 6e-025
Identities = 34/46 (73%), Positives = 36/46 (78%)
Frame = -2 / +3
Query: 324 QACALQQEAHHHLSGDSNLCSPCPSRRARQARCL*GHQGRH*VHII 187
QA LQQEAHHHL GD +L P P R ARQARCL*GHQGRH VHI+
Sbjct: 147 QAGPLQQEAHHHLPGDPDLRPPRPPRGARQARCL*GHQGRHKVHIL 284
Score = 48.3 bits (99), Expect(2) = 6e-025
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = -2 / +3
Query: 453 DLQDLHLQGAEAGPPRHRHLFQG 385
DLQDLHLQG +AG P HRHL QG
Sbjct: 18 DLQDLHLQGPQAGAPGHRHLLQG 86
Score = 39.6 bits (80), Expect(2) = 2e-024
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +2 / -1
Query: 374 *WTWPWKRCRCRG 412
*WTWPW+RCRC G
Sbjct: 97 *WTWPWRRCRCPG 59
>gb|CN815929.1|CN815929 HRO4515_A08_B15ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4515_A08_B15, mRNA sequence
Length = 655
Score = 206 bits (445), Expect = 3e-054
Identities = 91/92 (98%), Positives = 92/92 (100%)
Frame = -3 / +3
Query: 458 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGEAAKLARYNKKPTITSRE 279
VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGE+AKLARYNKKPTITSRE
Sbjct: 81 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITSRE 260
Query: 278 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 183
IQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*
Sbjct: 261 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 356
Score = 150 bits (323), Expect = 2e-037
Identities = 70/92 (76%), Positives = 72/92 (78%)
Frame = +1 / -1
Query: 184 *DDVNLVTALVPSETACLASSPGRTRRTEV*ISREVMVGFXXXXXXXXXXXXXXXKMSLM 363
*D+VN VTALVPS+TACLASSPGRTRRTEV ISREVMVGF KMSLM
Sbjct: 355 *DEVNFVTALVPSDTACLASSPGRTRRTEVWISREVMVGFLLYLASFADSPASFSKMSLM 176
Query: 364 KEFMMDMALEEMPMSGWTCFSTLKM*IL*VST 459
KEFMMDMALEEMPMSG TCF TLKM*IL VST
Sbjct: 175 KEFMMDMALEEMPMSGCTCFRTLKM*ILYVST 80
Score = 141 bits (303), Expect = 1e-034
Identities = 64/89 (71%), Positives = 70/89 (78%)
Frame = +3 / -3
Query: 177 SNLR*CELSDGLGALRDSVLGELAGKDKANRGLNLPRGDGGLLVVARKLGSLAGELLEDV 356
+ LR EL D LGAL +LGEL G+DKA+ GL+LP GDGGLLVV RKL LA E LEDV
Sbjct: 362 NRLRRGELRDSLGALGHGMLGELPGEDKADGGLDLPGGDGGLLVVPRKLCRLASEFLEDV 183
Query: 357 VDEGVHDGHGLGRDADVGVDLLQHLEDVD 443
VDEGVHDGHGLG DADVG+ LLQ LEDVD
Sbjct: 182 VDEGVHDGHGLGGDADVGMHLLQDLEDVD 96
Score = 76.2 bits (160), Expect(2) = 3e-021
Identities = 29/48 (60%), Positives = 37/48 (77%)
Frame = +2 / -2
Query: 179 KSKMM*T**RPWCPQRQRAWRARREGQGEQRFESPER*WWASCCSAQA 322
++K *T *+PWCP+ + AWRA R GQG +R SP R*WWASCC++QA
Sbjct: 360 QTKTR*TS*QPWCPRTRHAWRAPRGGQGGRRSGSPGR*WWASCCTSQA 217
Score = 71.2 bits (149), Expect(2) = 3e-022
Identities = 28/46 (60%), Positives = 34/46 (73%)
Frame = -2 / +2
Query: 324 QACALQQEAHHHLSGDSNLCSPCPSRRARQARCL*GHQGRH*VHII 187
+AC +QQEAHHHL GD +L PCP R ARQA + GHQG H VH++
Sbjct: 215 KACEVQQEAHHHLPGDPDLRPPCPPRGARQACRVRGHQGCHEVHLV 352
Score = 48.3 bits (99), Expect(2) = 3e-022
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = -2 / +2
Query: 453 DLQDLHLQGAEAGPPRHRHLFQG 385
D+QDLHLQG EAG RHRHL QG
Sbjct: 86 DIQDLHLQGPEAGASRHRHLLQG 154
Score = 40.0 bits (81), Expect(2) = 3e-021
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +2 / -2
Query: 374 *WTWPWKRCRCR 409
*WTWPW+RCRCR
Sbjct: 165 *WTWPWRRCRCR 130
>gb|CN821624.1|CN821624 HRO4408_D06_H12ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4408_D06_H12, mRNA
sequence
Length = 415
Score = 206 bits (445), Expect = 3e-054
Identities = 91/92 (98%), Positives = 92/92 (100%)
Frame = -3 / +2
Query: 458 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGEAAKLARYNKKPTITSRE 279
VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGE+AKLARYNKKPTITSRE
Sbjct: 41 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITSRE 220
Query: 278 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 183
IQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*
Sbjct: 221 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 316
Score = 153 bits (328), Expect = 4e-038
Identities = 72/92 (78%), Positives = 74/92 (80%)
Frame = +1 / -2
Query: 184 *DDVNLVTALVPSETACLASSPGRTRRTEV*ISREVMVGFXXXXXXXXXXXXXXXKMSLM 363
*+DVNLVTALVPSETACLASSPGRTRRTEV ISREVMVGF KMSLM
Sbjct: 315 *EDVNLVTALVPSETACLASSPGRTRRTEVCISREVMVGFLL*RASLADSPASFSKMSLM 136
Query: 364 KEFMMDMALEEMPMSGWTCFSTLKM*IL*VST 459
KEFMMDMALE+MPMSG TC STLKM*IL*VST
Sbjct: 135 KEFMMDMALEDMPMSGCTCLSTLKM*IL*VST 40
Score = 153 bits (328), Expect = 4e-038
Identities = 67/89 (75%), Positives = 76/89 (85%)
Frame = +3 / -1
Query: 177 SNLR*CELSDGLGALRDSVLGELAGKDKANRGLNLPRGDGGLLVVARKLGSLAGELLEDV 356
S+LR CEL D LGALRDSVLGELAG+D+A+RGL LP GDGGLLVVA +LG L +LL+DV
Sbjct: 322 SSLRGCELGDSLGALRDSVLGELAGEDEADRGLYLPGGDGGLLVVASELGRLPSKLLKDV 143
Query: 357 VDEGVHDGHGLGRDADVGVDLLQHLEDVD 443
V+EGVHDGHGLG ADV V LL+HLEDVD
Sbjct: 142 VNEGVHDGHGLGGYADVRVHLLEHLEDVD 56
Score = 95.9 bits (203), Expect(2) = 7e-026
Identities = 37/48 (77%), Positives = 40/48 (83%)
Frame = +2 / -3
Query: 185 KMM*T**RPWCPQRQRAWRARREGQGEQRFESPER*WWASCCSAQAWQ 328
K M*T *+PWCPQRQRAWRARR G+G QR SP R*WWASCCS +AWQ
Sbjct: 314 KRM*TW*QPWCPQRQRAWRARRGGRGGQRSVSPGR*WWASCCSERAWQ 171
Score = 91.3 bits (193), Expect(2) = 1e-028
Identities = 36/47 (76%), Positives = 40/47 (85%)
Frame = -2 / +1
Query: 327 CQACALQQEAHHHLSGDSNLCSPCPSRRARQARCL*GHQGRH*VHII 187
CQA +LQQEAHHHL GD++LC P P RRARQARCL*GHQG H VHI+
Sbjct: 172 CQARSLQQEAHHHLPGDTDLCPPRPPRRARQARCL*GHQGCHQVHIL 312
Score = 49.6 bits (102), Expect(2) = 1e-028
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = -2 / +1
Query: 453 DLQDLHLQGAEAGPPRHRHLFQG 385
DLQDLHLQGA+AG P HRH+ QG
Sbjct: 46 DLQDLHLQGAQAGAPGHRHILQG 114
Score = 35.9 bits (72), Expect(2) = 7e-026
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / -3
Query: 374 *WTWPWKRCRCRG 412
*WTWPW+ CRC G
Sbjct: 125 *WTWPWRICRCPG 87
>gb|CN816090.1|CN816090 HRO4516_H02_P04ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4516_H02_P04, mRNA sequence
Length = 472
Score = 204 bits (441), Expect = 9e-054
Identities = 90/91 (98%), Positives = 91/91 (100%)
Frame = -3 / +2
Query: 455 ETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGEAAKLARYNKKPTITSREI 276
ETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGE+AKLARYNKKPTITSREI
Sbjct: 11 ETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITSREI 190
Query: 275 QTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 183
QTSVRLVLPGELAKHAVSEGTKAVTKFTSS*
Sbjct: 191 QTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 283
Score = 152 bits (327), Expect = 5e-038
Identities = 66/87 (75%), Positives = 72/87 (82%)
Frame = +3 / -1
Query: 183 LR*CELSDGLGALRDSVLGELAGKDKANRGLNLPRGDGGLLVVARKLGSLAGELLEDVVD 362
LR EL DGLGALRD VLGEL K K NR L+LP GDGGLLVV R+LG LA +LL+D+VD
Sbjct: 283 LRGSELGDGLGALRDGVLGELPWKHKTNRSLDLPGGDGGLLVVPRELGRLASQLLKDIVD 104
Query: 363 EGVHDGHGLGRDADVGVDLLQHLEDVD 443
EGVHDGHGLG DADVGVDLL+ LEDVD
Sbjct: 103 EGVHDGHGLGGDADVGVDLLEDLEDVD 23
Score = 147 bits (316), Expect = 2e-036
Identities = 68/91 (74%), Positives = 71/91 (78%)
Frame = +1 / -2
Query: 184 *DDVNLVTALVPSETACLASSPGRTRRTEV*ISREVMVGFXXXXXXXXXXXXXXXKMSLM 363
*++VNLVTALVPSETACLASSPG TRRTEV IS EVMVGF K+SLM
Sbjct: 282 *EEVNLVTALVPSETACLASSPGSTRRTEVWISLEVMVGFLLYLASLADSPASFSKISLM 103
Query: 364 KEFMMDMALEEMPMSGWTCFSTLKM*IL*VS 456
KEFMMDMALEEMPMSGWTC TLKM*IL*VS
Sbjct: 102 KEFMMDMALEEMPMSGWTCLRTLKM*IL*VS 10
Score = 86.8 bits (183), Expect(2) = 5e-026
Identities = 33/48 (68%), Positives = 38/48 (79%)
Frame = +2 / -3
Query: 185 KMM*T**RPWCPQRQRAWRARREGQGEQRFESPER*WWASCCSAQAWQ 328
K *T *RPWCPQR+RAWRA E Q EQ+ SP R*WWASCC+++AWQ
Sbjct: 281 KRK*TW*RPWCPQRRRAWRAPLEAQDEQKSGSPWR*WWASCCTSRAWQ 138
Score = 82.6 bits (174), Expect(2) = 1e-027
Identities = 33/47 (70%), Positives = 36/47 (76%)
Frame = -2 / +1
Query: 327 CQACALQQEAHHHLSGDSNLCSPCPSRRARQARCL*GHQGRH*VHII 187
CQA +QQEAHHHL GD + CS C SR ARQAR L*GHQGRH VH +
Sbjct: 139 CQAREVQQEAHHHLQGDPDFCSSCASRGARQARRL*GHQGRHQVHFL 279
Score = 55.1 bits (114), Expect(2) = 1e-027
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = -2 / +1
Query: 453 DLQDLHLQGAEAGPPRHRHLFQG 385
DLQDLHLQG +AGPPRHRHL QG
Sbjct: 13 DLQDLHLQGPQAGPPRHRHLLQG 81
Score = 45.5 bits (93), Expect(2) = 5e-026
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +2 / -3
Query: 374 *WTWPWKRCRCRGG 415
*WTWPW+RCRCRGG
Sbjct: 92 *WTWPWRRCRCRGG 51
>gb|CN817108.1|CN817108 HRO4528_C10_F20ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4528_C10_F20, mRNA sequence
Length = 360
Score = 157 bits (337), Expect = 2e-039
Identities = 71/73 (97%), Positives = 72/73 (98%)
Frame = -3 / +2
Query: 401 GISSKAMSIMNSFINDIFEKLAGEAAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVS 222
GISS AMSIMNSFINDIFEKLAGE+AKLARYNKKPTITSREIQTSVRLVLPGELAKHAVS
Sbjct: 11 GISS*AMSIMNSFINDIFEKLAGESAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVS 190
Query: 221 EGTKAVTKFTSS* 183
EGTKAVTKFTSS*
Sbjct: 191 EGTKAVTKFTSS* 229
Score = 128 bits (275), Expect = 7e-031
Identities = 55/72 (76%), Positives = 63/72 (87%)
Frame = +3 / -3
Query: 177 SNLR*CELSDGLGALRDSVLGELAGKDKANRGLNLPRGDGGLLVVARKLGSLAGELLEDV 356
S+LR CEL D LGALRDSVLGELAG+D+A+RGL LP GDGGLLVVA +LG L +LL+DV
Sbjct: 235 SSLRGCELGDSLGALRDSVLGELAGEDEADRGLYLPGGDGGLLVVASELGRLPSKLLKDV 56
Query: 357 VDEGVHDGHGLG 392
V+EGVHDGHGLG
Sbjct: 55 VNEGVHDGHGLG 20
Score = 116 bits (249), Expect = 3e-027
Identities = 54/74 (72%), Positives = 57/74 (77%)
Frame = +1 / -1
Query: 184 *DDVNLVTALVPSETACLASSPGRTRRTEV*ISREVMVGFXXXXXXXXXXXXXXXKMSLM 363
*+DVNLVTALVPSETACLASSPGRTRRTEV ISREVMVGF KMSLM
Sbjct: 228 *EDVNLVTALVPSETACLASSPGRTRRTEVCISREVMVGFLL*RASLADSPASFSKMSLM 49
Query: 364 KEFMMDMALEEMPM 405
KEFMMDMA E+MP+
Sbjct: 48 KEFMMDMA*EDMPL 7
Score = 95.9 bits (203), Expect = 6e-021
Identities = 37/48 (77%), Positives = 40/48 (83%)
Frame = +2 / -2
Query: 185 KMM*T**RPWCPQRQRAWRARREGQGEQRFESPER*WWASCCSAQAWQ 328
K M*T *+PWCPQRQRAWRARR G+G QR SP R*WWASCCS +AWQ
Sbjct: 227 KRM*TW*QPWCPQRQRAWRARRGGRGGQRSVSPGR*WWASCCSERAWQ 84
>gb|CN815430.1|CN815430 HRO4509_F01_K01ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4509_F01_K01, mRNA sequence
Length = 361
Score = 117 bits (250), Expect = 2e-027
Identities = 53/55 (96%), Positives = 54/55 (98%)
Frame = -3 / +3
Query: 347 EKLAGEAAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 183
EKLA E+AKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*
Sbjct: 12 EKLACESAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 176
>gb|CN816143.1|CN816143 HRO4517_E01_I01ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4517_E01_I01, mRNA sequence
Length = 384
Score = 93.2 bits (197), Expect(2) = 2e-024
Identities = 41/42 (97%), Positives = 42/42 (100%)
Frame = -3 / +2
Query: 305 KKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*I 180
KKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*+
Sbjct: 56 KKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*V 181
Score = 33.6 bits (67), Expect(2) = 2e-024
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = -3 / +3
Query: 350 FEKLAGEAAKLARYNKKP 297
FEKL+GE+AKLAR+ + P
Sbjct: 12 FEKLSGESAKLARFTRSP 65
Database: Avena_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:15 PM
Number of letters in database: 4,702,463
Number of sequences in database: 8143
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 6,050,196
Number of Sequences: 8143
Number of extensions: 70017
Number of successful extensions: 1038
Number of sequences better than 1.0e-020: 9
length of database: 1,567,487
effective HSP length: 42
effective length of database: 1,225,481
effective search space used: 230390428
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)