TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCI2h07.yg.2.1
(286 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AF091713.1|AF091713 Arabidopsis thaliana cellulose synth... 149 2e-035
gb|AF088917.1|AF088917 Arabidopsis thaliana cellulose synth... 149 2e-035
gb|AY139754.1| Arabidopsis thaliana AT5g17420/T10B6_80 mRNA... 149 2e-035
gb|BT004543.1| Arabidopsis thaliana AT5g17420/T10B6_80 gene... 149 2e-035
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 149 2e-035
emb|AL391142.1|ATT10B6 Arabidopsis thaliana DNA chromosome ... 149 2e-035
ref|NM_121747.2| Arabidopsis thaliana unknown protein AT5G1... 149 2e-035
ref|NM_180507.1| Arabidopsis thaliana unknown protein AT5G1... 149 2e-035
ref|NM_121748.2| Arabidopsis thaliana IRX3 (IRREGULAR XYLEM... 149 2e-035
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 149 2e-035
gb|AY136423.1| Arabidopsis thaliana cellulose synthase cata... 149 3e-035
gb|BT008832.1| Arabidopsis thaliana At5g09870 mRNA, complet... 149 3e-035
dbj|AB016893.1| Arabidopsis thaliana genomic DNA, chromosom... 149 3e-035
ref|NM_121024.1| Arabidopsis thaliana CESA5 (CELLULASE SYNT... 149 3e-035
gb|AI999519.1|AI999519 701556274 A. thaliana, Columbia Col-... 148 4e-035
gb|AF062485.1|AF062485 Arabidopsis thaliana cellulose synth... 148 4e-035
gb|AF375439.1| Arabidopsis thaliana AT5g64740/MVP7_7 mRNA, ... 148 4e-035
emb|AX507835.1| Sequence 2530 from Patent WO0216655 148 4e-035
gb|AY143957.1| Arabidopsis thaliana At5g64740/MVP7_7 mRNA, ... 148 4e-035
gb|AC007019.5| Arabidopsis thaliana chromosome 2 clone F7D8... 148 4e-035
dbj|AB025637.1| Arabidopsis thaliana genomic DNA, chromosom... 148 4e-035
ref|NM_127746.1| Arabidopsis thaliana CESA9 (CELLULASE SYNT... 148 4e-035
ref|NM_125870.2| Arabidopsis thaliana CESA6 (CELLULASE SYNT... 148 4e-035
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 148 4e-035
dbj|AK220815.1| Arabidopsis thaliana mRNA for cellulose syn... 147 7e-035
gb|AF027173.1|AF027173 Arabidopsis thaliana cellulose synth... 145 4e-034
gb|AY059858.1| Arabidopsis thaliana cellulose synthase cata... 145 4e-034
gb|AY093308.1| Arabidopsis thaliana cellulose synthase cata... 145 4e-034
dbj|BD022677.1| Manipulation of cellulose and/or beta-1,4-g... 145 4e-034
emb|AX505864.1| Sequence 559 from Patent WO0216655 145 4e-034
emb|AX030944.1| Sequence 7 from Patent WO9800549 145 4e-034
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 145 4e-034
emb|AL050351.1|ATT22F8 Arabidopsis thaliana DNA chromosome ... 145 4e-034
emb|AL161595.2|ATCHRIV91 Arabidopsis thaliana DNA chromosom... 145 4e-034
ref|NM_120095.2| Arabidopsis thaliana CESA2; cellulose synt... 145 4e-034
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 145 4e-034
emb|BX829237.1|CNS0A4ID Arabidopsis thaliana Full-length cD... 144 9e-034
gb|AQ967081.1|AQ967081 LERIP40TF LERG Arabidopsis thaliana ... 141 5e-033
gb|AQ967082.1|AQ967082 LERIP40TR LERG Arabidopsis thaliana ... 141 5e-033
gb|AF267742.1|AF267742 Arabidopsis thaliana cellulose synth... 141 5e-033
gb|AY099636.1| Arabidopsis thaliana cellulose synthase-like... 141 5e-033
emb|AL035526.1|ATF28A21 Arabidopsis thaliana DNA chromosome... 141 5e-033
emb|AL161549.2|ATCHRIV49 Arabidopsis thaliana DNA chromosom... 141 5e-033
ref|NM_117994.2| Arabidopsis thaliana CESA8 (CELLULASE SYNT... 141 5e-033
emb|BX832166.1|CNS0A1ML Arabidopsis thaliana Full-length cD... 140 1e-032
gb|AI994106.1|AI994106 701498975 A. thaliana, Ohio State cl... 79 9e-032
dbj|AB018111.1| Arabidopsis thaliana genomic DNA, chromosom... 79 3e-031
gb|AF027174.1|AF027174 Arabidopsis thaliana cellulose synth... 79 3e-031
dbj|BD022678.1| Manipulation of cellulose and/or beta-1,4-g... 79 3e-031
emb|AX030946.1| Sequence 9 from Patent WO9800549 79 3e-031
ref|NM_120599.2| Arabidopsis thaliana CESA3 (CELLULASE SYNT... 79 3e-031
gb|BT002335.1| Arabidopsis thaliana clone C104938 putative ... 79 3e-031
gb|AV442267.1|AV442267 AV442267 Arabidopsis thaliana above-... 77 3e-031
emb|BX833432.1|CNS09Z0L Arabidopsis thaliana Full-length cD... 80 4e-031
dbj|AB006703.1| Arabidopsis thaliana genomic DNA, chromosom... 80 7e-031
gb|CK121679.1|CK121679 202d06.p1 AtM1 Arabidopsis thaliana ... 77 7e-031
ref|NM_123770.2| Arabidopsis thaliana CESA4 (CELLULASE SYNT... 80 7e-031
gb|BT005710.1| Arabidopsis thaliana clone RAFL15-30-K05 (R5... 80 7e-031
gb|BT006111.1| Arabidopsis thaliana clone U50150 putative c... 80 7e-031
gb|AF458083.1| Arabidopsis thaliana cellulose synthase (IRX... 80 7e-031
ref|NM_123771.3| Arabidopsis thaliana unknown protein AT5G4... 80 7e-031
emb|BX827280.1|CNS0A2E6 Arabidopsis thaliana Full-length cD... 77 7e-031
gb|AV782896.1|AV782896 AV782896 RAFL5 Arabidopsis thaliana ... 134 7e-031
emb|AL161581.2|ATCHRIV77 Arabidopsis thaliana DNA chromosom... 77 1e-030
emb|AL034567.1|ATF8B4 Arabidopsis thaliana DNA chromosome 4... 77 1e-030
dbj|BD022674.1| Manipulation of cellulose and/or beta-1,4-g... 77 1e-030
emb|AX030940.1| Sequence 3 from Patent WO9800549 77 1e-030
gb|AF027172.1|AF027172 Arabidopsis thaliana cellulose synth... 77 1e-030
ref|NM_119393.2| Arabidopsis thaliana CESA1 (CELLULASE SYNT... 77 1e-030
gb|BT008654.1| Arabidopsis thaliana clone RAFL09-89-G08 (R1... 77 1e-030
dbj|BD022679.1| Manipulation of cellulose and/or beta-1,4-g... 77 1e-030
emb|AX030948.1| Sequence 11 from Patent WO9800549 77 1e-030
dbj|BD022676.1| Manipulation of cellulose and/or beta-1,4-g... 77 1e-030
emb|AX030942.1| Sequence 5 from Patent WO9800549 77 1e-030
dbj|AK222115.1| Arabidopsis thaliana mRNA for cellulose syn... 77 1e-030
gb|AV544917.1|AV544917 AV544917 Arabidopsis thaliana roots ... 77 3e-030
gb|AV566035.1|AV566035 AV566035 Arabidopsis thaliana green ... 132 3e-030
emb|BX822015.1|CNS0AAAJ Arabidopsis thaliana Full-length cD... 77 2e-029
gb|AC006300.4| Arabidopsis thaliana chromosome 2 clone F13B... 77 4e-029
ref|NM_128111.2| Arabidopsis thaliana CESA10 (CELLULASE SYN... 77 4e-029
emb|BX821788.1|CNS0A924 Arabidopsis thaliana Full-length cD... 77 4e-029
gb|AV550996.1|AV550996 AV550996 Arabidopsis thaliana roots ... 128 5e-029
emb|BX833092.1|CNS0A0FM Arabidopsis thaliana Full-length cD... 77 8e-029
gb|AV538691.1|AV538691 AV538691 Arabidopsis thaliana roots ... 124 6e-028
dbj|BD022673.1| Manipulation of cellulose and/or beta-1,4-g... 72 2e-027
emb|AX030938.1| Sequence 1 from Patent WO9800549 72 2e-027
gb|AA650885.1|AA650885 30999 Lambda-PRL2 Arabidopsis thalia... 103 2e-025
gb|AV523438.1|AV523438 AV523438 Arabidopsis thaliana aboveg... 77 8e-024
>gb|AF091713.1|AF091713 Arabidopsis thaliana cellulose synthase catalytic subunit (IRX3)
gene, complete cds
Length = 7234
Score = 149 bits (320), Expect = 2e-035
Identities = 58/92 (63%), Positives = 68/92 (73%)
Frame = +3 / +3
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGG+S+HLFAV QGLLK +AG+DT+FTVTSK DD++F ELY FKW
Sbjct: 4173 QFWVIGGISAHLFAVVQGLLKILAGIDTNFTVTSKATDDDDFGELYAFKWTTLLIPPTTV 4352
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAGI +AI GY+SWGPLFGKLFF
Sbjct: 4353 LIINIVGVVAGISDAINNGYQSWGPLFGKLFF 4448
>gb|AF088917.1|AF088917 Arabidopsis thaliana cellulose synthase catalytic subunit (IRX3)
mRNA, complete cds
Length = 3081
Score = 149 bits (320), Expect = 2e-035
Identities = 58/92 (63%), Positives = 68/92 (73%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGG+S+HLFAV QGLLK +AG+DT+FTVTSK DD++F ELY FKW
Sbjct: 2614 QFWVIGGISAHLFAVVQGLLKILAGIDTNFTVTSKATDDDDFGELYAFKWTTLLIPPTTV 2793
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAGI +AI GY+SWGPLFGKLFF
Sbjct: 2794 LIINIVGVVAGISDAINNGYQSWGPLFGKLFF 2889
>gb|AY139754.1| Arabidopsis thaliana AT5g17420/T10B6_80 mRNA, complete cds
Length = 3355
Score = 149 bits (320), Expect = 2e-035
Identities = 58/92 (63%), Positives = 68/92 (73%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGG+S+HLFAV QGLLK +AG+DT+FTVTSK DD++F ELY FKW
Sbjct: 2659 QFWVIGGISAHLFAVVQGLLKILAGIDTNFTVTSKATDDDDFGELYAFKWTTLLIPPTTV 2838
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAGI +AI GY+SWGPLFGKLFF
Sbjct: 2839 LIINIVGVVAGISDAINNGYQSWGPLFGKLFF 2934
>gb|BT004543.1| Arabidopsis thaliana AT5g17420/T10B6_80 gene, complete cds
Length = 3081
Score = 149 bits (320), Expect = 2e-035
Identities = 58/92 (63%), Positives = 68/92 (73%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGG+S+HLFAV QGLLK +AG+DT+FTVTSK DD++F ELY FKW
Sbjct: 2614 QFWVIGGISAHLFAVVQGLLKILAGIDTNFTVTSKATDDDDFGELYAFKWTTLLIPPTTV 2793
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAGI +AI GY+SWGPLFGKLFF
Sbjct: 2794 LIINIVGVVAGISDAINNGYQSWGPLFGKLFF 2889
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 149 bits (320), Expect = 2e-035
Identities = 58/92 (63%), Positives = 68/92 (73%)
Frame = +3 / -1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGG+S+HLFAV QGLLK +AG+DT+FTVTSK DD++F ELY FKW
Sbjct: 5490301 QFWVIGGISAHLFAVVQGLLKILAGIDTNFTVTSKATDDDDFGELYAFKWTTLLIPPTTV 5490122
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAGI +AI GY+SWGPLFGKLFF
Sbjct: 5490121 LIINIVGVVAGISDAINNGYQSWGPLFGKLFF 5490026
Score = 149 bits (319), Expect = 3e-035
Identities = 59/92 (64%), Positives = 68/92 (73%)
Frame = +3 / +3
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFA+FQGLLK +AGV+T+FTVTSK DD EFSELY FKW
Sbjct: 2896593 QFWVIGGVSAHLFALFQGLLKVLAGVETNFTVTSKAADDGEFSELYIFKWTSLLIPPTTL 2896772
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N IGV+ GI +AI GY+SWGPLFG+LFF
Sbjct: 2896773 LIINVIGVIVGISDAISNGYDSWGPLFGRLFF 2896868
Score = 148 bits (318), Expect = 4e-035
Identities = 58/92 (63%), Positives = 68/92 (73%)
Frame = +3 / +2
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFA+FQGLLK +AGVDT+FTVTSK DD EFS+LY FKW
Sbjct: 22911179 QFWVIGGVSAHLFALFQGLLKVLAGVDTNFTVTSKAADDGEFSDLYLFKWTSLLIPPMTL 22911358
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N IGV+ G+ +AI GY+SWGPLFG+LFF
Sbjct: 22911359 LIINVIGVIVGVSDAISNGYDSWGPLFGRLFF 22911454
>emb|AL391142.1|ATT10B6 Arabidopsis thaliana DNA chromosome 5, BAC clone T10B6 (ESSA project)
Length = 33563
Score = 149 bits (320), Expect = 2e-035
Identities = 58/92 (63%), Positives = 68/92 (73%)
Frame = +3 / -2
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGG+S+HLFAV QGLLK +AG+DT+FTVTSK DD++F ELY FKW
Sbjct: 21130 QFWVIGGISAHLFAVVQGLLKILAGIDTNFTVTSKATDDDDFGELYAFKWTTLLIPPTTV 20951
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAGI +AI GY+SWGPLFGKLFF
Sbjct: 20950 LIINIVGVVAGISDAINNGYQSWGPLFGKLFF 20855
>ref|NM_121747.2| Arabidopsis thaliana unknown protein AT5G17410 transcript variant
AT5G17410.1 mRNA, complete cds
Length = 3027
Score = 149 bits (320), Expect = 2e-035
Identities = 58/92 (63%), Positives = 68/92 (73%)
Frame = +3 / -3
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGG+S+HLFAV QGLLK +AG+DT+FTVTSK DD++F ELY FKW
Sbjct: 2989 QFWVIGGISAHLFAVVQGLLKILAGIDTNFTVTSKATDDDDFGELYAFKWTTLLIPPTTV 2810
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAGI +AI GY+SWGPLFGKLFF
Sbjct: 2809 LIINIVGVVAGISDAINNGYQSWGPLFGKLFF 2714
>ref|NM_180507.1| Arabidopsis thaliana unknown protein AT5G17410 transcript variant
AT5G17410.2 mRNA, complete cds
Length = 3030
Score = 149 bits (320), Expect = 2e-035
Identities = 58/92 (63%), Positives = 68/92 (73%)
Frame = +3 / -3
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGG+S+HLFAV QGLLK +AG+DT+FTVTSK DD++F ELY FKW
Sbjct: 2992 QFWVIGGISAHLFAVVQGLLKILAGIDTNFTVTSKATDDDDFGELYAFKWTTLLIPPTTV 2813
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAGI +AI GY+SWGPLFGKLFF
Sbjct: 2812 LIINIVGVVAGISDAINNGYQSWGPLFGKLFF 2717
>ref|NM_121748.2| Arabidopsis thaliana IRX3 (IRREGULAR XYLEM 3); cellulose synthase
AT5G17420 (IRX3) mRNA, complete cds
Length = 3693
Score = 149 bits (320), Expect = 2e-035
Identities = 58/92 (63%), Positives = 68/92 (73%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGG+S+HLFAV QGLLK +AG+DT+FTVTSK DD++F ELY FKW
Sbjct: 2659 QFWVIGGISAHLFAVVQGLLKILAGIDTNFTVTSKATDDDDFGELYAFKWTTLLIPPTTV 2838
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAGI +AI GY+SWGPLFGKLFF
Sbjct: 2839 LIINIVGVVAGISDAINNGYQSWGPLFGKLFF 2934
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 149 bits (320), Expect = 2e-035
Identities = 58/92 (63%), Positives = 68/92 (73%)
Frame = +3 / -2
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGG+S+HLFAV QGLLK +AG+DT+FTVTSK DD++F ELY FKW
Sbjct: 5737328 QFWVIGGISAHLFAVVQGLLKILAGIDTNFTVTSKATDDDDFGELYAFKWTTLLIPPTTV 5737149
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAGI +AI GY+SWGPLFGKLFF
Sbjct: 5737148 LIINIVGVVAGISDAINNGYQSWGPLFGKLFF 5737053
Score = 149 bits (319), Expect = 3e-035
Identities = 59/92 (64%), Positives = 68/92 (73%)
Frame = +3 / +3
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFA+FQGLLK +AGV+T+FTVTSK DD EFSELY FKW
Sbjct: 3077508 QFWVIGGVSAHLFALFQGLLKVLAGVETNFTVTSKAADDGEFSELYIFKWTSLLIPPTTL 3077687
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N IGV+ GI +AI GY+SWGPLFG+LFF
Sbjct: 3077688 LIINVIGVIVGISDAISNGYDSWGPLFGRLFF 3077783
Score = 148 bits (318), Expect = 4e-035
Identities = 58/92 (63%), Positives = 68/92 (73%)
Frame = +3 / +3
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFA+FQGLLK +AGVDT+FTVTSK DD EFS+LY FKW
Sbjct: 25903092 QFWVIGGVSAHLFALFQGLLKVLAGVDTNFTVTSKAADDGEFSDLYLFKWTSLLIPPMTL 25903271
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N IGV+ G+ +AI GY+SWGPLFG+LFF
Sbjct: 25903272 LIINVIGVIVGVSDAISNGYDSWGPLFGRLFF 25903367
>gb|AY136423.1| Arabidopsis thaliana cellulose synthase catalytic subunit (At5g09870)
mRNA, complete cds
Length = 1490
Score = 149 bits (319), Expect = 3e-035
Identities = 59/92 (64%), Positives = 68/92 (73%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFA+FQGLLK +AGV+T+FTVTSK DD EFSELY FKW
Sbjct: 733 QFWVIGGVSAHLFALFQGLLKVLAGVETNFTVTSKAADDGEFSELYIFKWTSLLIPPTTL 912
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N IGV+ GI +AI GY+SWGPLFG+LFF
Sbjct: 913 LIINVIGVIVGISDAISNGYDSWGPLFGRLFF 1008
>gb|BT008832.1| Arabidopsis thaliana At5g09870 mRNA, complete cds
Length = 1041
Score = 149 bits (319), Expect = 3e-035
Identities = 59/92 (64%), Positives = 68/92 (73%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFA+FQGLLK +AGV+T+FTVTSK DD EFSELY FKW
Sbjct: 574 QFWVIGGVSAHLFALFQGLLKVLAGVETNFTVTSKAADDGEFSELYIFKWTSLLIPPTTL 753
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N IGV+ GI +AI GY+SWGPLFG+LFF
Sbjct: 754 LIINVIGVIVGISDAISNGYDSWGPLFGRLFF 849
>dbj|AB016893.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MYH9
Length = 82390
Score = 149 bits (319), Expect = 3e-035
Identities = 59/92 (64%), Positives = 68/92 (73%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFA+FQGLLK +AGV+T+FTVTSK DD EFSELY FKW
Sbjct: 30271 QFWVIGGVSAHLFALFQGLLKVLAGVETNFTVTSKAADDGEFSELYIFKWTSLLIPPTTL 30450
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N IGV+ GI +AI GY+SWGPLFG+LFF
Sbjct: 30451 LIINVIGVIVGISDAISNGYDSWGPLFGRLFF 30546
>ref|NM_121024.1| Arabidopsis thaliana CESA5 (CELLULASE SYNTHASE 5); transferase,
transferring glycosyl groups AT5G09870 (CESA5) mRNA,
complete cds
Length = 3210
Score = 149 bits (319), Expect = 3e-035
Identities = 59/92 (64%), Positives = 68/92 (73%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFA+FQGLLK +AGV+T+FTVTSK DD EFSELY FKW
Sbjct: 2743 QFWVIGGVSAHLFALFQGLLKVLAGVETNFTVTSKAADDGEFSELYIFKWTSLLIPPTTL 2922
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N IGV+ GI +AI GY+SWGPLFG+LFF
Sbjct: 2923 LIINVIGVIVGISDAISNGYDSWGPLFGRLFF 3018
>gb|AI999519.1|AI999519 701556274 A. thaliana, Columbia Col-0, rosette-3 Arabidopsis
thaliana cDNA clone 701556274, mRNA sequence
Length = 613
Score = 148 bits (318), Expect = 4e-035
Identities = 59/92 (64%), Positives = 68/92 (73%)
Frame = +3 / -3
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVSSHLFA+FQGLLK +AGV T+FTVTSK DD EFSELY FKW
Sbjct: 509 QFWVIGGVSSHLFALFQGLLKXLAGVSTNFTVTSKAADDGEFSELYIFKWTSLLIPPTTL 330
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GV+ G+ +AI GY+SWGPLFG+LFF
Sbjct: 329 LIINIVGVIVGVSDAINNGYDSWGPLFGRLFF 234
>gb|AF062485.1|AF062485 Arabidopsis thaliana cellulose synthase mRNA, partial cds
Length = 3444
Score = 148 bits (318), Expect = 4e-035
Identities = 58/92 (63%), Positives = 68/92 (73%)
Frame = +3 / +2
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFA+FQGLLK +AGVDT+FTVTSK DD EFS+LY FKW
Sbjct: 2780 QFWVIGGVSAHLFALFQGLLKVLAGVDTNFTVTSKAADDGEFSDLYLFKWTSLLIPPMTL 2959
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N IGV+ G+ +AI GY+SWGPLFG+LFF
Sbjct: 2960 LIINVIGVIVGVSDAISNGYDSWGPLFGRLFF 3055
>gb|AF375439.1| Arabidopsis thaliana AT5g64740/MVP7_7 mRNA, complete cds
Length = 1492
Score = 148 bits (318), Expect = 4e-035
Identities = 58/92 (63%), Positives = 68/92 (73%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFA+FQGLLK +AGVDT+FTVTSK DD EFS+LY FKW
Sbjct: 880 QFWVIGGVSAHLFALFQGLLKVLAGVDTNFTVTSKAADDGEFSDLYLFKWTSLLIPPMTL 1059
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N IGV+ G+ +AI GY+SWGPLFG+LFF
Sbjct: 1060 LIINVIGVIVGVSDAISNGYDSWGPLFGRLFF 1155
>emb|AX507835.1| Sequence 2530 from Patent WO0216655
Length = 3255
Score = 148 bits (318), Expect = 4e-035
Identities = 58/92 (63%), Positives = 68/92 (73%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFA+FQGLLK +AGVDT+FTVTSK DD EFS+LY FKW
Sbjct: 2788 QFWVIGGVSAHLFALFQGLLKVLAGVDTNFTVTSKAADDGEFSDLYLFKWTSLLIPPMTL 2967
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N IGV+ G+ +AI GY+SWGPLFG+LFF
Sbjct: 2968 LIINVIGVIVGVSDAISNGYDSWGPLFGRLFF 3063
>gb|AY143957.1| Arabidopsis thaliana At5g64740/MVP7_7 mRNA, complete cds
Length = 1101
Score = 148 bits (318), Expect = 4e-035
Identities = 58/92 (63%), Positives = 68/92 (73%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFA+FQGLLK +AGVDT+FTVTSK DD EFS+LY FKW
Sbjct: 634 QFWVIGGVSAHLFALFQGLLKVLAGVDTNFTVTSKAADDGEFSDLYLFKWTSLLIPPMTL 813
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N IGV+ G+ +AI GY+SWGPLFG+LFF
Sbjct: 814 LIINVIGVIVGVSDAISNGYDSWGPLFGRLFF 909
>gb|AC007019.5| Arabidopsis thaliana chromosome 2 clone F7D8 map mi238, complete
sequence
Length = 107848
Score = 148 bits (318), Expect = 4e-035
Identities = 58/92 (63%), Positives = 67/92 (72%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVSSHLFA+FQGLLK +AGV T+FTVTSK DD EFSELY FKW
Sbjct: 19948 QFWVIGGVSSHLFALFQGLLKVLAGVSTNFTVTSKAADDGEFSELYIFKWTSLLIPPTTL 20127
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GV+ G+ +AI GY+SWGPLFG+LFF
Sbjct: 20128 LIINIVGVIVGVSDAINNGYDSWGPLFGRLFF 20223
>dbj|AB025637.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MVP7
Length = 39645
Score = 148 bits (318), Expect = 4e-035
Identities = 58/92 (63%), Positives = 68/92 (73%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFA+FQGLLK +AGVDT+FTVTSK DD EFS+LY FKW
Sbjct: 22846 QFWVIGGVSAHLFALFQGLLKVLAGVDTNFTVTSKAADDGEFSDLYLFKWTSLLIPPMTL 23025
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N IGV+ G+ +AI GY+SWGPLFG+LFF
Sbjct: 23026 LIINVIGVIVGVSDAISNGYDSWGPLFGRLFF 23121
>ref|NM_127746.1| Arabidopsis thaliana CESA9 (CELLULASE SYNTHASE 9); transferase,
transferring glycosyl groups AT2G21770 (CESA9) mRNA,
complete cds
Length = 3308
Score = 148 bits (318), Expect = 4e-035
Identities = 58/92 (63%), Positives = 67/92 (72%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVSSHLFA+FQGLLK +AGV T+FTVTSK DD EFSELY FKW
Sbjct: 2797 QFWVIGGVSSHLFALFQGLLKVLAGVSTNFTVTSKAADDGEFSELYIFKWTSLLIPPTTL 2976
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GV+ G+ +AI GY+SWGPLFG+LFF
Sbjct: 2977 LIINIVGVIVGVSDAINNGYDSWGPLFGRLFF 3072
>ref|NM_125870.2| Arabidopsis thaliana CESA6 (CELLULASE SYNTHASE 6); transferase,
transferring glycosyl groups AT5G64740 (CESA6) mRNA,
complete cds
Length = 4105
Score = 148 bits (318), Expect = 4e-035
Identities = 58/92 (63%), Positives = 68/92 (73%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFA+FQGLLK +AGVDT+FTVTSK DD EFS+LY FKW
Sbjct: 3277 QFWVIGGVSAHLFALFQGLLKVLAGVDTNFTVTSKAADDGEFSDLYLFKWTSLLIPPMTL 3456
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N IGV+ G+ +AI GY+SWGPLFG+LFF
Sbjct: 3457 LIINVIGVIVGVSDAISNGYDSWGPLFGRLFF 3552
>ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complete sequence
Length = 19705359
Score = 148 bits (318), Expect = 4e-035
Identities = 58/92 (63%), Positives = 67/92 (72%)
Frame = +3 / +2
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVSSHLFA+FQGLLK +AGV T+FTVTSK DD EFSELY FKW
Sbjct: 9296105 QFWVIGGVSSHLFALFQGLLKVLAGVSTNFTVTSKAADDGEFSELYIFKWTSLLIPPTTL 9296284
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GV+ G+ +AI GY+SWGPLFG+LFF
Sbjct: 9296285 LIINIVGVIVGVSDAINNGYDSWGPLFGRLFF 9296380
>dbj|AK220815.1| Arabidopsis thaliana mRNA for cellulose synthase catalytic subunit,
partial cds, clone: RAFL22-31-O12
Length = 930
Score = 147 bits (316), Expect = 7e-035
Identities = 57/92 (61%), Positives = 67/92 (72%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGG+S+HLFAV QGLLK + G+DT+FTVTSK DD++F ELY FKW
Sbjct: 289 QFWVIGGISAHLFAVVQGLLKILTGIDTNFTVTSKATDDDDFGELYAFKWTTLLIPPTTV 468
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAGI +AI GY+SWGPLFGKLFF
Sbjct: 469 LIINIVGVVAGISDAINNGYQSWGPLFGKLFF 564
>gb|AF027173.1|AF027173 Arabidopsis thaliana cellulose synthase catalytic subunit (Ath-A)
mRNA, complete cds
Length = 3771
Score = 145 bits (311), Expect = 4e-034
Identities = 57/92 (61%), Positives = 66/92 (71%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGG SSHLFA+FQGLLK +AGV+T+FTVTSK DD FSELY FKW
Sbjct: 3001 QFWVIGGASSHLFALFQGLLKVLAGVNTNFTVTSKAADDGAFSELYIFKWTTLLIPPTTL 3180
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N IGV+ G+ +AI GY+SWGPLFG+LFF
Sbjct: 3181 LIINIIGVIVGVSDAISNGYDSWGPLFGRLFF 3276
>gb|AY059858.1| Arabidopsis thaliana cellulose synthase catalytic subunit (Ath-A)
(At4g39350; T22F8.250) mRNA, complete cds
Length = 1699
Score = 145 bits (311), Expect = 4e-034
Identities = 57/92 (61%), Positives = 66/92 (71%)
Frame = +3 / +2
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGG SSHLFA+FQGLLK +AGV+T+FTVTSK DD FSELY FKW
Sbjct: 1058 QFWVIGGASSHLFALFQGLLKVLAGVNTNFTVTSKAADDGAFSELYIFKWTTLLIPPTTL 1237
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N IGV+ G+ +AI GY+SWGPLFG+LFF
Sbjct: 1238 LIINIIGVIVGVSDAISNGYDSWGPLFGRLFF 1333
>gb|AY093308.1| Arabidopsis thaliana cellulose synthase catalytic subunit (At4g39350)
mRNA, complete cds
Length = 1587
Score = 145 bits (311), Expect = 4e-034
Identities = 57/92 (61%), Positives = 66/92 (71%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGG SSHLFA+FQGLLK +AGV+T+FTVTSK DD FSELY FKW
Sbjct: 1054 QFWVIGGASSHLFALFQGLLKVLAGVNTNFTVTSKAADDGAFSELYIFKWTTLLIPPTTL 1233
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N IGV+ G+ +AI GY+SWGPLFG+LFF
Sbjct: 1234 LIINIIGVIVGVSDAISNGYDSWGPLFGRLFF 1329
>dbj|BD022677.1| Manipulation of cellulose and/or beta-1,4-glucan
Length = 3828
Score = 145 bits (311), Expect = 4e-034
Identities = 57/92 (61%), Positives = 66/92 (71%)
Frame = +3 / +2
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGG SSHLFA+FQGLLK +AGV+T+FTVTSK DD FSELY FKW
Sbjct: 3023 QFWVIGGASSHLFALFQGLLKVLAGVNTNFTVTSKAADDGAFSELYIFKWTTLLIPPTTL 3202
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N IGV+ G+ +AI GY+SWGPLFG+LFF
Sbjct: 3203 LIINIIGVIVGVSDAISNGYDSWGPLFGRLFF 3298
>emb|AX505864.1| Sequence 559 from Patent WO0216655
Length = 3255
Score = 145 bits (311), Expect = 4e-034
Identities = 57/92 (61%), Positives = 66/92 (71%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGG SSHLFA+FQGLLK +AGV+T+FTVTSK DD FSELY FKW
Sbjct: 2785 QFWVIGGASSHLFALFQGLLKVLAGVNTNFTVTSKAADDGAFSELYIFKWTTLLIPPTTL 2964
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N IGV+ G+ +AI GY+SWGPLFG+LFF
Sbjct: 2965 LIINIIGVIVGVSDAISNGYDSWGPLFGRLFF 3060
>emb|AX030944.1| Sequence 7 from Patent WO9800549
Length = 3828
Score = 145 bits (311), Expect = 4e-034
Identities = 57/92 (61%), Positives = 66/92 (71%)
Frame = +3 / +2
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGG SSHLFA+FQGLLK +AGV+T+FTVTSK DD FSELY FKW
Sbjct: 3023 QFWVIGGASSHLFALFQGLLKVLAGVNTNFTVTSKAADDGAFSELYIFKWTTLLIPPTTL 3202
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N IGV+ G+ +AI GY+SWGPLFG+LFF
Sbjct: 3203 LIINIIGVIVGVSDAISNGYDSWGPLFGRLFF 3298
>emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long arm
Length = 14497843
Score = 145 bits (311), Expect = 4e-034
Identities = 57/92 (61%), Positives = 66/92 (71%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGG SSHLFA+FQGLLK +AGV+T+FTVTSK DD FSELY FKW
Sbjct: 14214214 QFWVIGGASSHLFALFQGLLKVLAGVNTNFTVTSKAADDGAFSELYIFKWTTLLIPPTTL 14214393
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N IGV+ G+ +AI GY+SWGPLFG+LFF
Sbjct: 14214394 LIINIIGVIVGVSDAISNGYDSWGPLFGRLFF 14214489
Score = 141 bits (303), Expect = 5e-033
Identities = 56/92 (60%), Positives = 65/92 (70%)
Frame = +3 / -1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFAVFQG LK +AG+DT+FTVTSK DD EF ELY KW
Sbjct: 6226075 QFWVIGGVSAHLFAVFQGFLKMLAGLDTNFTVTSKTADDLEFGELYIVKWTTLLIPPTSL 6225896
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAG +A+ GYE+WGPLFGK+FF
Sbjct: 6225895 LIINLVGVVAGFSDALNKGYEAWGPLFGKVFF 6225800
Score = 76.7 bits (161), Expect(2) = 1e-030
Identities = 28/55 (50%), Positives = 35/55 (63%)
Frame = +3 / -2
Query: 120 DDEEFSELYTFKWXXXXXXXXXXXXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
+D +F+ELY FKW N IG+VAG+ A+ GY+SWGPLFGKLFF
Sbjct: 11554149 EDGDFAELYIFKWTALLIPPTTVLLVNLIGIVAGVSYAVNSGYQSWGPLFGKLFF 11553985
Score = 76.7 bits (161), Expect(2) = 1e-030
Identities = 29/40 (72%), Positives = 35/40 (87%)
Frame = +3 / -2
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDE 128
QFW IGG S+HLFAVFQGLLK +AG+DT+FTVTSK D++
Sbjct: 11554263 QFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKATDED 11554144
>emb|AL050351.1|ATT22F8 Arabidopsis thaliana DNA chromosome 4, BAC clone T22F8 (ESSA project)
Length = 89035
Score = 145 bits (311), Expect = 4e-034
Identities = 57/92 (61%), Positives = 66/92 (71%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGG SSHLFA+FQGLLK +AGV+T+FTVTSK DD FSELY FKW
Sbjct: 84112 QFWVIGGASSHLFALFQGLLKVLAGVNTNFTVTSKAADDGAFSELYIFKWTTLLIPPTTL 84291
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N IGV+ G+ +AI GY+SWGPLFG+LFF
Sbjct: 84292 LIINIIGVIVGVSDAISNGYDSWGPLFGRLFF 84387
>emb|AL161595.2|ATCHRIV91 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 91
Length = 198151
Score = 145 bits (311), Expect = 4e-034
Identities = 57/92 (61%), Positives = 66/92 (71%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGG SSHLFA+FQGLLK +AGV+T+FTVTSK DD FSELY FKW
Sbjct: 21589 QFWVIGGASSHLFALFQGLLKVLAGVNTNFTVTSKAADDGAFSELYIFKWTTLLIPPTTL 21768
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N IGV+ G+ +AI GY+SWGPLFG+LFF
Sbjct: 21769 LIINIIGVIVGVSDAISNGYDSWGPLFGRLFF 21864
>ref|NM_120095.2| Arabidopsis thaliana CESA2; cellulose synthase/ transferase,
transferring glycosyl groups AT4G39350 (CESA2) mRNA,
complete cds
Length = 3726
Score = 145 bits (311), Expect = 4e-034
Identities = 57/92 (61%), Positives = 66/92 (71%)
Frame = +3 / +2
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGG SSHLFA+FQGLLK +AGV+T+FTVTSK DD FSELY FKW
Sbjct: 2954 QFWVIGGASSHLFALFQGLLKVLAGVNTNFTVTSKAADDGAFSELYIFKWTTLLIPPTTL 3133
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N IGV+ G+ +AI GY+SWGPLFG+LFF
Sbjct: 3134 LIINIIGVIVGVSDAISNGYDSWGPLFGRLFF 3229
>ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complete sequence
Length = 18585042
Score = 145 bits (311), Expect = 4e-034
Identities = 57/92 (61%), Positives = 66/92 (71%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGG SSHLFA+FQGLLK +AGV+T+FTVTSK DD FSELY FKW
Sbjct: 18301414 QFWVIGGASSHLFALFQGLLKVLAGVNTNFTVTSKAADDGAFSELYIFKWTTLLIPPTTL 18301593
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N IGV+ G+ +AI GY+SWGPLFG+LFF
Sbjct: 18301594 LIINIIGVIVGVSDAISNGYDSWGPLFGRLFF 18301689
Score = 141 bits (303), Expect = 5e-033
Identities = 56/92 (60%), Positives = 65/92 (70%)
Frame = +3 / -2
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFAVFQG LK +AG+DT+FTVTSK DD EF ELY KW
Sbjct: 10313330 QFWVIGGVSAHLFAVFQGFLKMLAGLDTNFTVTSKTADDLEFGELYIVKWTTLLIPPTSL 10313151
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAG +A+ GYE+WGPLFGK+FF
Sbjct: 10313150 LIINLVGVVAGFSDALNKGYEAWGPLFGKVFF 10313055
>emb|BX829237.1|CNS0A4ID Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL83ZF02 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 657
Score = 144 bits (308), Expect = 9e-034
Identities = 57/92 (61%), Positives = 65/92 (70%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFAVFQG LK +AG+DT+FTVTSK DD EF ELY KW
Sbjct: 52 QFWVIGGVSAHLFAVFQGFLKMLAGLDTNFTVTSKTADDLEFGELYIVKWTTLLIPPTSL 231
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAG NA+ GYE+WGPLFGK+FF
Sbjct: 232 LIINLVGVVAGFSNALNKGYEAWGPLFGKVFF 327
>gb|AQ967081.1|AQ967081 LERIP40TF LERG Arabidopsis thaliana genomic clone LERIP40, DNA
sequence
Length = 660
Score = 141 bits (303), Expect = 5e-033
Identities = 56/92 (60%), Positives = 65/92 (70%)
Frame = +3 / +3
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFAVFQG LK +AG+DT+FTVTSK DD EF ELY KW
Sbjct: 186 QFWVIGGVSAHLFAVFQGFLKMLAGLDTNFTVTSKTADDLEFGELYIVKWTTLLIPPTSL 365
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAG +A+ GYE+WGPLFGK+FF
Sbjct: 366 LIINLVGVVAGFSDALNKGYEAWGPLFGKVFF 461
>gb|AQ967082.1|AQ967082 LERIP40TR LERG Arabidopsis thaliana genomic clone LERIP40, DNA
sequence
Length = 645
Score = 141 bits (303), Expect = 5e-033
Identities = 56/92 (60%), Positives = 65/92 (70%)
Frame = +3 / -2
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFAVFQG LK +AG+DT+FTVTSK DD EF ELY KW
Sbjct: 470 QFWVIGGVSAHLFAVFQGFLKMLAGLDTNFTVTSKTADDLEFGELYIVKWTTLLIPPTSL 291
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAG +A+ GYE+WGPLFGK+FF
Sbjct: 290 LIINLVGVVAGFSDALNKGYEAWGPLFGKVFF 195
>gb|AF267742.1|AF267742 Arabidopsis thaliana cellulose synthase catalytic subunit (IRX1)
mRNA, complete cds
Length = 2958
Score = 141 bits (303), Expect = 5e-033
Identities = 56/92 (60%), Positives = 65/92 (70%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFAVFQG LK +AG+DT+FTVTSK DD EF ELY KW
Sbjct: 2485 QFWVIGGVSAHLFAVFQGFLKMLAGLDTNFTVTSKTADDLEFGELYIVKWTTLLIPPTSL 2664
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAG +A+ GYE+WGPLFGK+FF
Sbjct: 2665 LIINLVGVVAGFSDALNKGYEAWGPLFGKVFF 2760
>gb|AY099636.1| Arabidopsis thaliana cellulose synthase-like protein (At4g18780)
mRNA, complete cds
Length = 3109
Score = 141 bits (303), Expect = 5e-033
Identities = 56/92 (60%), Positives = 65/92 (70%)
Frame = +3 / +2
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFAVFQG LK +AG+DT+FTVTSK DD EF ELY KW
Sbjct: 2552 QFWVIGGVSAHLFAVFQGFLKMLAGLDTNFTVTSKTADDLEFGELYIVKWTTLLIPPTSL 2731
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAG +A+ GYE+WGPLFGK+FF
Sbjct: 2732 LIINLVGVVAGFSDALNKGYEAWGPLFGKVFF 2827
>emb|AL035526.1|ATF28A21 Arabidopsis thaliana DNA chromosome 4, BAC clone F28A21 (ESSA project)
Length = 94301
Score = 141 bits (303), Expect = 5e-033
Identities = 56/92 (60%), Positives = 65/92 (70%)
Frame = +3 / -3
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFAVFQG LK +AG+DT+FTVTSK DD EF ELY KW
Sbjct: 72177 QFWVIGGVSAHLFAVFQGFLKMLAGLDTNFTVTSKTADDLEFGELYIVKWTTLLIPPTSL 71998
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAG +A+ GYE+WGPLFGK+FF
Sbjct: 71997 LIINLVGVVAGFSDALNKGYEAWGPLFGKVFF 71902
>emb|AL161549.2|ATCHRIV49 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 49
Length = 199075
Score = 141 bits (303), Expect = 5e-033
Identities = 56/92 (60%), Positives = 65/92 (70%)
Frame = +3 / -2
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFAVFQG LK +AG+DT+FTVTSK DD EF ELY KW
Sbjct: 91458 QFWVIGGVSAHLFAVFQGFLKMLAGLDTNFTVTSKTADDLEFGELYIVKWTTLLIPPTSL 91279
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAG +A+ GYE+WGPLFGK+FF
Sbjct: 91278 LIINLVGVVAGFSDALNKGYEAWGPLFGKVFF 91183
>ref|NM_117994.2| Arabidopsis thaliana CESA8 (CELLULASE SYNTHASE 8); cellulose
synthase/ transferase, transferring glycosyl groups
AT4G18780 (CESA8) mRNA, complete cds
Length = 3217
Score = 141 bits (303), Expect = 5e-033
Identities = 56/92 (60%), Positives = 65/92 (70%)
Frame = +3 / +2
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFAVFQG LK +AG+DT+FTVTSK DD EF ELY KW
Sbjct: 2552 QFWVIGGVSAHLFAVFQGFLKMLAGLDTNFTVTSKTADDLEFGELYIVKWTTLLIPPTSL 2731
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAG +A+ GYE+WGPLFGK+FF
Sbjct: 2732 LIINLVGVVAGFSDALNKGYEAWGPLFGKVFF 2827
>emb|BX832166.1|CNS0A1ML Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH56ZA06 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 3911
Score = 140 bits (300), Expect = 1e-032
Identities = 56/91 (61%), Positives = 66/91 (72%)
Frame = +3 / +1
Query: 12 FWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXXX 191
F IGGVS+HLFA+FQGLLK +AGVDT+FTVTSK DD EFS+LY FKW
Sbjct: 3220 FGVIGGVSAHLFALFQGLLKVLAGVDTNFTVTSKAADDGEFSDLYLFKWTSLLIPPMTLL 3399
Query: 192 XXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N IGV+ G+ +AI GY+SWGPLFG+LFF
Sbjct: 3400 IINVIGVIVGVSDAISNGYDSWGPLFGRLFF 3492
>gb|AI994106.1|AI994106 701498975 A. thaliana, Ohio State clone set Arabidopsis thaliana
cDNA clone 701498975, mRNA sequence
Length = 534
Score = 78.5 bits (165), Expect(2) = 9e-032
Identities = 29/40 (72%), Positives = 36/40 (90%)
Frame = +3 / +2
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDE 128
QFW IGGVS+HLFAVFQG+LK +AG+DT+FTVTSK D++
Sbjct: 200 QFWVIGGVSAHLFAVFQGILKVLAGIDTNFTVTSKASDED 319
Score = 77.1 bits (162), Expect(2) = 9e-032
Identities = 29/55 (52%), Positives = 35/55 (63%)
Frame = +3 / +2
Query: 120 DDEEFSELYTFKWXXXXXXXXXXXXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
+D +F+ELY FKW N +GVVAG+ AI GY+SWGPLFGKLFF
Sbjct: 314 EDGDFAELYLFKWTTLLIPPTTLLIVNLVGVVAGVSYAINSGYQSWGPLFGKLFF 478
>dbj|AB018111.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K2A11
Length = 29292
Score = 78.5 bits (165), Expect(2) = 3e-031
Identities = 29/40 (72%), Positives = 36/40 (90%)
Frame = +3 / -1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDE 128
QFW IGGVS+HLFAVFQG+LK +AG+DT+FTVTSK D++
Sbjct: 11469 QFWVIGGVSAHLFAVFQGILKVLAGIDTNFTVTSKASDED 11350
Score = 77.1 bits (162), Expect(2) = 3e-031
Identities = 29/55 (52%), Positives = 35/55 (63%)
Frame = +3 / -1
Query: 120 DDEEFSELYTFKWXXXXXXXXXXXXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
+D +F+ELY FKW N +GVVAG+ AI GY+SWGPLFGKLFF
Sbjct: 11355 EDGDFAELYLFKWTTLLIPPTTLLIVNLVGVVAGVSYAINSGYQSWGPLFGKLFF 11191
>gb|AF027174.1|AF027174 Arabidopsis thaliana cellulose synthase catalytic subunit (Ath-B)
mRNA, complete cds
Length = 3682
Score = 78.5 bits (165), Expect(2) = 3e-031
Identities = 29/40 (72%), Positives = 36/40 (90%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDE 128
QFW IGGVS+HLFAVFQG+LK +AG+DT+FTVTSK D++
Sbjct: 2983 QFWVIGGVSAHLFAVFQGILKVLAGIDTNFTVTSKASDED 3102
Score = 77.1 bits (162), Expect(2) = 3e-031
Identities = 29/55 (52%), Positives = 35/55 (63%)
Frame = +3 / +1
Query: 120 DDEEFSELYTFKWXXXXXXXXXXXXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
+D +F+ELY FKW N +GVVAG+ AI GY+SWGPLFGKLFF
Sbjct: 3097 EDGDFAELYLFKWTTLLIPPTTLLIVNLVGVVAGVSYAINSGYQSWGPLFGKLFF 3261
>dbj|BD022678.1| Manipulation of cellulose and/or beta-1,4-glucan
Length = 3614
Score = 78.5 bits (165), Expect(2) = 3e-031
Identities = 29/40 (72%), Positives = 36/40 (90%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDE 128
QFW IGGVS+HLFAVFQG+LK +AG+DT+FTVTSK D++
Sbjct: 2944 QFWVIGGVSAHLFAVFQGILKVLAGIDTNFTVTSKASDED 3063
Score = 77.1 bits (162), Expect(2) = 3e-031
Identities = 29/55 (52%), Positives = 35/55 (63%)
Frame = +3 / +1
Query: 120 DDEEFSELYTFKWXXXXXXXXXXXXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
+D +F+ELY FKW N +GVVAG+ AI GY+SWGPLFGKLFF
Sbjct: 3058 EDGDFAELYLFKWTTLLIPPTTLLIVNLVGVVAGVSYAINSGYQSWGPLFGKLFF 3222
>emb|AX030946.1| Sequence 9 from Patent WO9800549
Length = 3614
Score = 78.5 bits (165), Expect(2) = 3e-031
Identities = 29/40 (72%), Positives = 36/40 (90%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDE 128
QFW IGGVS+HLFAVFQG+LK +AG+DT+FTVTSK D++
Sbjct: 2944 QFWVIGGVSAHLFAVFQGILKVLAGIDTNFTVTSKASDED 3063
Score = 77.1 bits (162), Expect(2) = 3e-031
Identities = 29/55 (52%), Positives = 35/55 (63%)
Frame = +3 / +1
Query: 120 DDEEFSELYTFKWXXXXXXXXXXXXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
+D +F+ELY FKW N +GVVAG+ AI GY+SWGPLFGKLFF
Sbjct: 3058 EDGDFAELYLFKWTTLLIPPTTLLIVNLVGVVAGVSYAINSGYQSWGPLFGKLFF 3222
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 488,603,395
Number of Sequences: 1013581
Number of extensions: 4761753
Number of successful extensions: 182038
Number of sequences better than 1.0e-020: 95
length of database: 302,980,290
effective HSP length: 52
effective length of database: 250,274,078
effective search space used: 10511511276
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)