TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCH17d04.yg.2.1
(637 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AY117132.1| Arabidopsis thaliana core alpha 1,3-fucosylt... 339 4e-092
emb|AJ404860.1|ATH404860 Arabidopsis thaliana mRNA for alph... 337 2e-091
emb|AJ345084.1|ATH345084 Arabidopsis thaliana mRNA for core... 337 2e-091
ref|NM_112815.2| Arabidopsis thaliana FUT11; 4-galactosyl-N... 337 2e-091
gb|AY302219.1| Arabidopsis thaliana alpha 1,3 fucosyltransf... 332 7e-090
ref|NM_103858.2| Arabidopsis thaliana FUT12; fucosyltransfe... 213 1e-084
gb|AY054522.1| Arabidopsis thaliana Putative fucosyltransfe... 213 1e-084
emb|AJ404861.2|ATH404861 Arabidopsis thaliana mRNA for trun... 213 1e-084
gb|BT002570.1| Arabidopsis thaliana Putative fucosyltransfe... 213 1e-084
gb|AY184991.1| Arabidopsis thaliana alpha 1, 3-fucosyltrans... 213 1e-084
emb|AJ345085.1|ATH345085 Arabidopsis thaliana mRNA for core... 213 1e-084
gb|AY184990.1| Arabidopsis thaliana core alpha 1, 3-fucosyl... 212 1e-084
dbj|AP000419.1| Arabidopsis thaliana genomic DNA, chromosom... 138 6e-073
gb|B67847.1|B67847 T24K12TR TAMU Arabidopsis thaliana genom... 138 3e-064
gb|CK120486.1|CK120486 218i09.p1 AtM1 Arabidopsis thaliana ... 213 4e-054
emb|AL093853.1|CNS00WOV Arabidopsis thaliana genome survey ... 138 5e-047
gb|AC011807.4|AC011807 Arabidopsis thaliana chromosome I BA... 103 1e-042
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 103 2e-038
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 138 1e-031
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 138 1e-031
gb|BX835636.1|BX835636 BX835636 Arabidopsis thaliana Adult ... 116 5e-025
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 103 5e-021
>gb|AY117132.1| Arabidopsis thaliana core alpha 1,3-fucosyltransferase mRNA, partial
cds
Length = 1319
Score = 339 bits (735), Expect = 4e-092
Identities = 133/211 (63%), Positives = 165/211 (78%)
Frame = -1 / +2
Query: 634 YRFSXXFEXXXEXDYXXEKFFQXXVXGSIPVVVGAPNIQEFXPGEGAILHIXXLDDVASV 455
Y+FS FE E DY EKFFQ V GS+PVVVGAPNI+EF P + LHI +DDV +V
Sbjct: 533 YKFSLAFENTNEEDYVTEKFFQSLVAGSVPVVVGAPNIEEFAPSPDSFLHIKQMDDVKAV 712
Query: 454 AKTMKNIASNPDAFNQSLRWKYDGPSDSFKALIDMAAVHSSCRLCIHIATKIHLKEERTP 275
AK MK +A NPDA+NQ+LRWK++GPSDSFKALIDMAAVHSSCRLCI +AT+IH +EE++P
Sbjct: 713 AKKMKYLADNPDAYNQTLRWKHEGPSDSFKALIDMAAVHSSCRLCIFVATRIHEQEEKSP 892
Query: 274 KFTNRPCSCSTKKGTIYHLFIRERGRFKSESIYMRSGQLTLGALESAVLGKFRSLNHVPV 95
+F +PC C+ T+YHL++RERGRF ESI+++ G LTL ALESAVL KF SL + P+
Sbjct: 893 EFKRQPCKCTRGSETVYHLYVRERGRFDMESIFLKDGNLTLEALESAVLAKFMSLRYEPI 1072
Query: 94 WKDERPPSIRGGDDLKLYRIYPVGLTQRQAL 2
WK ERP S+RG L+++ IYP+GLTQRQAL
Sbjct: 1073 WKKERPASLRGDGKLRVHGIYPIGLTQRQAL 1165
Score = 178 bits (384), Expect = 1e-043
Identities = 97/182 (53%), Positives = 112/182 (61%)
Frame = +3 / -3
Query: 90 FHTGTWLRDLNLPSTADSKAPRVNWPDLM*MLSDLNRPLSRINKW*IVPFLVEQLQGRFV 269
FH G++LRD+N TADS+A RV +P M S NRPLS K * V + LQG +
Sbjct: 1077 FHIGSYLRDMNFARTADSRASRVRFPSFKKMDSMSNRPLSLTYK**TVSEPLVHLQGCLL 898
Query: 270 NFGVLSSFKWILVAICIQRRQDE*TAAMSIRALKESDGPSYFHLKD*LKASGFEAIFFIV 449
N G+ SS ILVA +QRRQ+E TAA+SI ALKES+GPS FHL *L ASG A +FI
Sbjct: 897 NSGLFSSCS*ILVATKMQRRQEECTAAISISALKESEGPSCFHLSV*L*ASGLSARYFIF 718
Query: 450 LATEATSSSXLICNIAPSPGXNS*IFGAPTTTGIEPXTXX*KNFSXX*SXSXXXSNXXLN 629
AT TSS L+ G NS IFGAPTTTG +P T KNFS *S S S LN
Sbjct: 717 FATALTSSICLM*RNESGEGANSSIFGAPTTTGTDPATRDWKNFSVT*SSSLVFSKARLN 538
Query: 630 L* 635
L*
Sbjct: 537 L* 532
>emb|AJ404860.1|ATH404860 Arabidopsis thaliana mRNA for alpha1,3-fucosyltransferase (FucTA
gene)
Length = 1506
Score = 337 bits (731), Expect = 2e-091
Identities = 133/211 (63%), Positives = 164/211 (77%)
Frame = -1 / +1
Query: 634 YRFSXXFEXXXEXDYXXEKFFQXXVXGSIPVVVGAPNIQEFXPGEGAILHIXXLDDVASV 455
Y+FS FE E DY EKFFQ V GS+PVVVGAPNI+EF P + LHI +DDV +V
Sbjct: 787 YKFSLAFENTNEEDYVTEKFFQSLVAGSVPVVVGAPNIEEFAPSPDSFLHIKQMDDVKAV 966
Query: 454 AKTMKNIASNPDAFNQSLRWKYDGPSDSFKALIDMAAVHSSCRLCIHIATKIHLKEERTP 275
AK MK +A NPDA+NQ+LRWK++GPSDSFKALIDMAAVHSSCRLCI +AT+I +EE++P
Sbjct: 967 AKKMKYLADNPDAYNQTLRWKHEGPSDSFKALIDMAAVHSSCRLCIFVATRIREQEEKSP 1146
Query: 274 KFTNRPCSCSTKKGTIYHLFIRERGRFKSESIYMRSGQLTLGALESAVLGKFRSLNHVPV 95
+F RPC C+ T+YHL++RERGRF ESI+++ G LTL ALESAVL KF SL + P+
Sbjct: 1147 EFKRRPCKCTRGSETVYHLYVRERGRFDMESIFLKDGNLTLEALESAVLAKFMSLRYEPI 1326
Query: 94 WKDERPPSIRGGDDLKLYRIYPVGLTQRQAL 2
WK ERP S+RG L+++ IYP+GLTQRQAL
Sbjct: 1327 WKKERPASLRGDGKLRVHGIYPIGLTQRQAL 1419
Score = 182 bits (393), Expect = 6e-045
Identities = 98/182 (53%), Positives = 113/182 (62%)
Frame = +3 / -2
Query: 90 FHTGTWLRDLNLPSTADSKAPRVNWPDLM*MLSDLNRPLSRINKW*IVPFLVEQLQGRFV 269
FH G++LRD+N TADS+A RV +P M S NRPLS K * V + LQGR +
Sbjct: 1331 FHIGSYLRDMNFARTADSRASRVRFPSFKKMDSMSNRPLSLTYK**TVSEPLVHLQGRLL 1152
Query: 270 NFGVLSSFKWILVAICIQRRQDE*TAAMSIRALKESDGPSYFHLKD*LKASGFEAIFFIV 449
N G+ SS ILVA +QRRQ+E TAA+SI ALKES+GPS FHL *L ASG A +FI
Sbjct: 1151 NSGLFSSCSRILVATKMQRRQEECTAAISISALKESEGPSCFHLSV*L*ASGLSARYFIF 972
Query: 450 LATEATSSSXLICNIAPSPGXNS*IFGAPTTTGIEPXTXX*KNFSXX*SXSXXXSNXXLN 629
AT TSS L+ G NS IFGAPTTTG +P T KNFS *S S S LN
Sbjct: 971 FATALTSSICLM*RNESGEGANSSIFGAPTTTGTDPATRDWKNFSVT*SSSLVFSKARLN 792
Query: 630 L* 635
L*
Sbjct: 791 L* 786
>emb|AJ345084.1|ATH345084 Arabidopsis thaliana mRNA for core-alpha1,3fucosyltransferase 1
(fucT1 gene)
Length = 1729
Score = 337 bits (731), Expect = 2e-091
Identities = 133/211 (63%), Positives = 164/211 (77%)
Frame = -1 / +3
Query: 634 YRFSXXFEXXXEXDYXXEKFFQXXVXGSIPVVVGAPNIQEFXPGEGAILHIXXLDDVASV 455
Y+FS FE E DY EKFFQ V GS+PVVVGAPNI+EF P + LHI +DDV +V
Sbjct: 879 YKFSLAFENTNEEDYVTEKFFQSLVAGSVPVVVGAPNIEEFAPSPDSFLHIKQMDDVKAV 1058
Query: 454 AKTMKNIASNPDAFNQSLRWKYDGPSDSFKALIDMAAVHSSCRLCIHIATKIHLKEERTP 275
AK MK +A NPDA+NQ+LRWK++GPSDSFKALIDMAAVHSSCRLCI +AT+I +EE++P
Sbjct: 1059 AKKMKYLADNPDAYNQTLRWKHEGPSDSFKALIDMAAVHSSCRLCIFVATRIREQEEKSP 1238
Query: 274 KFTNRPCSCSTKKGTIYHLFIRERGRFKSESIYMRSGQLTLGALESAVLGKFRSLNHVPV 95
+F RPC C+ T+YHL++RERGRF ESI+++ G LTL ALESAVL KF SL + P+
Sbjct: 1239 EFKRRPCKCTRGSETVYHLYVRERGRFDMESIFLKDGNLTLEALESAVLAKFMSLRYEPI 1418
Query: 94 WKDERPPSIRGGDDLKLYRIYPVGLTQRQAL 2
WK ERP S+RG L+++ IYP+GLTQRQAL
Sbjct: 1419 WKKERPASLRGDGKLRVHGIYPIGLTQRQAL 1511
Score = 182 bits (393), Expect = 6e-045
Identities = 98/182 (53%), Positives = 113/182 (62%)
Frame = +3 / -1
Query: 90 FHTGTWLRDLNLPSTADSKAPRVNWPDLM*MLSDLNRPLSRINKW*IVPFLVEQLQGRFV 269
FH G++LRD+N TADS+A RV +P M S NRPLS K * V + LQGR +
Sbjct: 1423 FHIGSYLRDMNFARTADSRASRVRFPSFKKMDSMSNRPLSLTYK**TVSEPLVHLQGRLL 1244
Query: 270 NFGVLSSFKWILVAICIQRRQDE*TAAMSIRALKESDGPSYFHLKD*LKASGFEAIFFIV 449
N G+ SS ILVA +QRRQ+E TAA+SI ALKES+GPS FHL *L ASG A +FI
Sbjct: 1243 NSGLFSSCSRILVATKMQRRQEECTAAISISALKESEGPSCFHLSV*L*ASGLSARYFIF 1064
Query: 450 LATEATSSSXLICNIAPSPGXNS*IFGAPTTTGIEPXTXX*KNFSXX*SXSXXXSNXXLN 629
AT TSS L+ G NS IFGAPTTTG +P T KNFS *S S S LN
Sbjct: 1063 FATALTSSICLM*RNESGEGANSSIFGAPTTTGTDPATRDWKNFSVT*SSSLVFSKARLN 884
Query: 630 L* 635
L*
Sbjct: 883 L* 878
>ref|NM_112815.2| Arabidopsis thaliana FUT11; 4-galactosyl-N-acetylglucosaminide
3-alpha-L-fucosyltransferase/ fucosyltransferase/
transferase, transferring glycosyl > AT3G19280 (FUT11)
mRNA, complete cds
Length = 1709
Score = 337 bits (731), Expect = 2e-091
Identities = 133/211 (63%), Positives = 164/211 (77%)
Frame = -1 / +2
Query: 634 YRFSXXFEXXXEXDYXXEKFFQXXVXGSIPVVVGAPNIQEFXPGEGAILHIXXLDDVASV 455
Y+FS FE E DY EKFFQ V GS+PVVVGAPNI+EF P + LHI +DDV +V
Sbjct: 878 YKFSLAFENTNEEDYVTEKFFQSLVAGSVPVVVGAPNIEEFAPSPDSFLHIKQMDDVKAV 1057
Query: 454 AKTMKNIASNPDAFNQSLRWKYDGPSDSFKALIDMAAVHSSCRLCIHIATKIHLKEERTP 275
AK MK +A NPDA+NQ+LRWK++GPSDSFKALIDMAAVHSSCRLCI +AT+I +EE++P
Sbjct: 1058 AKKMKYLADNPDAYNQTLRWKHEGPSDSFKALIDMAAVHSSCRLCIFVATRIREQEEKSP 1237
Query: 274 KFTNRPCSCSTKKGTIYHLFIRERGRFKSESIYMRSGQLTLGALESAVLGKFRSLNHVPV 95
+F RPC C+ T+YHL++RERGRF ESI+++ G LTL ALESAVL KF SL + P+
Sbjct: 1238 EFKRRPCKCTRGSETVYHLYVRERGRFDMESIFLKDGNLTLEALESAVLAKFMSLRYEPI 1417
Query: 94 WKDERPPSIRGGDDLKLYRIYPVGLTQRQAL 2
WK ERP S+RG L+++ IYP+GLTQRQAL
Sbjct: 1418 WKKERPASLRGDGKLRVHGIYPIGLTQRQAL 1510
Score = 182 bits (393), Expect = 6e-045
Identities = 98/182 (53%), Positives = 113/182 (62%)
Frame = +3 / -3
Query: 90 FHTGTWLRDLNLPSTADSKAPRVNWPDLM*MLSDLNRPLSRINKW*IVPFLVEQLQGRFV 269
FH G++LRD+N TADS+A RV +P M S NRPLS K * V + LQGR +
Sbjct: 1422 FHIGSYLRDMNFARTADSRASRVRFPSFKKMDSMSNRPLSLTYK**TVSEPLVHLQGRLL 1243
Query: 270 NFGVLSSFKWILVAICIQRRQDE*TAAMSIRALKESDGPSYFHLKD*LKASGFEAIFFIV 449
N G+ SS ILVA +QRRQ+E TAA+SI ALKES+GPS FHL *L ASG A +FI
Sbjct: 1242 NSGLFSSCSRILVATKMQRRQEECTAAISISALKESEGPSCFHLSV*L*ASGLSARYFIF 1063
Query: 450 LATEATSSSXLICNIAPSPGXNS*IFGAPTTTGIEPXTXX*KNFSXX*SXSXXXSNXXLN 629
AT TSS L+ G NS IFGAPTTTG +P T KNFS *S S S LN
Sbjct: 1062 FATALTSSICLM*RNESGEGANSSIFGAPTTTGTDPATRDWKNFSVT*SSSLVFSKARLN 883
Query: 630 L* 635
L*
Sbjct: 882 L* 877
>gb|AY302219.1| Arabidopsis thaliana alpha 1,3 fucosyltransferase mRNA, complete cds
Length = 1736
Score = 332 bits (719), Expect = 7e-090
Identities = 132/211 (62%), Positives = 163/211 (77%)
Frame = -1 / +3
Query: 634 YRFSXXFEXXXEXDYXXEKFFQXXVXGSIPVVVGAPNIQEFXPGEGAILHIXXLDDVASV 455
Y+FS FE E DY EKFFQ V GS+PVVVGAPNI+EF P + LHI +DDV +V
Sbjct: 804 YKFSLAFENTNEEDYVTEKFFQSLVAGSVPVVVGAPNIEEFAPSPDSFLHIKQMDDVKAV 983
Query: 454 AKTMKNIASNPDAFNQSLRWKYDGPSDSFKALIDMAAVHSSCRLCIHIATKIHLKEERTP 275
AK MK +A NPDA+NQ+LRWK++GPSDSFKALIDMAAVHSSCRLCI +AT+I +EE++P
Sbjct: 984 AKKMKYLADNPDAYNQTLRWKHEGPSDSFKALIDMAAVHSSCRLCIFVATRIREQEEKSP 1163
Query: 274 KFTNRPCSCSTKKGTIYHLFIRERGRFKSESIYMRSGQLTLGALESAVLGKFRSLNHVPV 95
+F RPC + T+YHL++RERGRF ESI+++ G LTL ALESAVL KF SL + P+
Sbjct: 1164 EFKRRPCKRTRGSETVYHLYVRERGRFDMESIFLKDGNLTLEALESAVLAKFMSLRYEPI 1343
Query: 94 WKDERPPSIRGGDDLKLYRIYPVGLTQRQAL 2
WK ERP S+RG L+++ IYP+GLTQRQAL
Sbjct: 1344 WKKERPASLRGDGKLRVHGIYPIGLTQRQAL 1436
Score = 183 bits (394), Expect = 5e-045
Identities = 98/182 (53%), Positives = 114/182 (62%)
Frame = +3 / -2
Query: 90 FHTGTWLRDLNLPSTADSKAPRVNWPDLM*MLSDLNRPLSRINKW*IVPFLVEQLQGRFV 269
FH G++LRD+N TADS+A RV +P M S NRPLS K * V + +LQGR +
Sbjct: 1348 FHIGSYLRDMNFARTADSRASRVRFPSFKKMDSMSNRPLSLTYK**TVSEPLVRLQGRLL 1169
Query: 270 NFGVLSSFKWILVAICIQRRQDE*TAAMSIRALKESDGPSYFHLKD*LKASGFEAIFFIV 449
N G+ SS ILVA +QRRQ+E TAA+SI ALKES+GPS FHL *L ASG A +FI
Sbjct: 1168 NSGLFSSCSRILVATKMQRRQEECTAAISISALKESEGPSCFHLSV*L*ASGLSARYFIF 989
Query: 450 LATEATSSSXLICNIAPSPGXNS*IFGAPTTTGIEPXTXX*KNFSXX*SXSXXXSNXXLN 629
AT TSS L+ G NS IFGAPTTTG +P T KNFS *S S S LN
Sbjct: 988 FATALTSSICLM*RNESGEGANSSIFGAPTTTGTDPATRDWKNFSVT*SSSLVFSKARLN 809
Query: 630 L* 635
L*
Sbjct: 808 L* 803
>ref|NM_103858.2| Arabidopsis thaliana FUT12; fucosyltransferase/ transferase,
transferring glycosyl groups AT1G49710 (FUT12) mRNA,
complete cds
Length = 1984
Score = 213 bits (459), Expect(2) = 1e-084
Identities = 82/131 (62%), Positives = 99/131 (75%)
Frame = -1 / +3
Query: 637 RYRFSXXFEXXXEXDYXXEKFFQXXVXGSIPVVVGAPNIQEFXPGEGAILHIXXLDDVAS 458
RY+FS FE E DY EKFFQ V GS+PVVVG PNI+EF P + LHI ++DV
Sbjct: 975 RYKFSLAFENTNEEDYVTEKFFQSLVAGSVPVVVGPPNIEEFAPASDSFLHIKTMEDVEP 1154
Query: 457 VAKTMKNIASNPDAFNQSLRWKYDGPSDSFKALIDMAAVHSSCRLCIHIATKIHLKEERT 278
VAK MK +A+NP A+NQ+LRWKY+GPSDSFKAL+DMAAVHSSCRLCI +AT++ +EE +
Sbjct: 1155 VAKRMKYLAANPAAYNQTLRWKYEGPSDSFKALVDMAAVHSSCRLCIFLATRVREQEEES 1334
Query: 277 PKFTNRPCSCS 245
P F RPC CS
Sbjct: 1335 PNFKKRPCKCS 1367
Score = 134 bits (288), Expect(3) = 4e-038
Identities = 69/127 (54%), Positives = 81/127 (63%)
Frame = +3 / -1
Query: 252 LQGRFVNFGVLSSFKWILVAICIQRRQDE*TAAMSIRALKESDGPSYFHLKD*LKASGFE 431
L GRF+ G+ SS LVA +QRRQ+E TAA+S ALKES+GPSYFHL *L A+G
Sbjct: 1360 LHGRFLKLGLSSSCSRTLVARKMQRRQEECTAAISTSALKESEGPSYFHLSV*L*AAGLA 1181
Query: 432 AIFFIVLATEATSSSXLICNIAPSPGXNS*IFGAPTTTGIEPXTXX*KNFSXX*SXSXXX 611
A +FI+ AT +TSS L+ G NS IFG PTTTG +P T *KNFS *S S
Sbjct: 1180 ARYFILFATGSTSSIVLM*RNESEAGANSSIFGGPTTTGTDPATKD*KNFSVT*SSSLVF 1001
Query: 612 SNXXLNL 632
S LNL
Sbjct: 1000 SKAKLNL 980
Score = 122 bits (262), Expect(2) = 1e-084
Identities = 47/77 (61%), Positives = 63/77 (81%)
Frame = -1 / +3
Query: 232 TIYHLFIRERGRFKSESIYMRSGQLTLGALESAVLGKFRSLNHVPVWKDERPPSIRGGDD 53
T+YH+F+RERGRF+ ES+++R +T ALESAVL KF+SL H VWK ERP +++G +
Sbjct: 1383 TVYHVFVRERGRFEMESVFLRGKSVTQEALESAVLAKFKSLKHEAVWKKERPGNLKGDKE 1562
Query: 52 LKLYRIYPVGLTQRQAL 2
LK++RIYP+GLTQRQAL
Sbjct: 1563 LKIHRIYPLGLTQRQAL 1613
Score = 37.3 bits (75), Expect(3) = 4e-038
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = +3 / -1
Query: 90 FHTGTWLRDLNLPSTADSKAPRVNWPDLM*MLSDLNRPLS 209
FHT + +DLNL TADS+A V L S NRPLS
Sbjct: 1525 FHTASCFKDLNLARTADSRAS*VTLLPLKKTDSISNRPLS 1406
Score = 26.3 bits (51), Expect(3) = 4e-038
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2 / -3
Query: 2 QSLTLR*TDWVNSV*FQVIPTSNARWPFILPY 97
QSL+LR* VN + F++ + PF+LP+
Sbjct: 1613 QSLSLR*AKRVNPMYFKLFVSF*VSRPFLLPH 1518
>gb|AY054522.1| Arabidopsis thaliana Putative fucosyltransferase (At1g49710;
F14J22.8) mRNA, complete cds
Length = 1938
Score = 213 bits (459), Expect(2) = 1e-084
Identities = 82/131 (62%), Positives = 99/131 (75%)
Frame = -1 / +1
Query: 637 RYRFSXXFEXXXEXDYXXEKFFQXXVXGSIPVVVGAPNIQEFXPGEGAILHIXXLDDVAS 458
RY+FS FE E DY EKFFQ V GS+PVVVG PNI+EF P + LHI ++DV
Sbjct: 976 RYKFSLAFENTNEEDYVTEKFFQSLVAGSVPVVVGPPNIEEFAPASDSFLHIKTMEDVEP 1155
Query: 457 VAKTMKNIASNPDAFNQSLRWKYDGPSDSFKALIDMAAVHSSCRLCIHIATKIHLKEERT 278
VAK MK +A+NP A+NQ+LRWKY+GPSDSFKAL+DMAAVHSSCRLCI +AT++ +EE +
Sbjct: 1156 VAKRMKYLAANPAAYNQTLRWKYEGPSDSFKALVDMAAVHSSCRLCIFLATRVREQEEES 1335
Query: 277 PKFTNRPCSCS 245
P F RPC CS
Sbjct: 1336 PNFKKRPCKCS 1368
Score = 134 bits (288), Expect(3) = 4e-038
Identities = 69/127 (54%), Positives = 81/127 (63%)
Frame = +3 / -2
Query: 252 LQGRFVNFGVLSSFKWILVAICIQRRQDE*TAAMSIRALKESDGPSYFHLKD*LKASGFE 431
L GRF+ G+ SS LVA +QRRQ+E TAA+S ALKES+GPSYFHL *L A+G
Sbjct: 1361 LHGRFLKLGLSSSCSRTLVARKMQRRQEECTAAISTSALKESEGPSYFHLSV*L*AAGLA 1182
Query: 432 AIFFIVLATEATSSSXLICNIAPSPGXNS*IFGAPTTTGIEPXTXX*KNFSXX*SXSXXX 611
A +FI+ AT +TSS L+ G NS IFG PTTTG +P T *KNFS *S S
Sbjct: 1181 ARYFILFATGSTSSIVLM*RNESEAGANSSIFGGPTTTGTDPATKD*KNFSVT*SSSLVF 1002
Query: 612 SNXXLNL 632
S LNL
Sbjct: 1001 SKAKLNL 981
Score = 122 bits (262), Expect(2) = 1e-084
Identities = 47/77 (61%), Positives = 63/77 (81%)
Frame = -1 / +1
Query: 232 TIYHLFIRERGRFKSESIYMRSGQLTLGALESAVLGKFRSLNHVPVWKDERPPSIRGGDD 53
T+YH+F+RERGRF+ ES+++R +T ALESAVL KF+SL H VWK ERP +++G +
Sbjct: 1384 TVYHVFVRERGRFEMESVFLRGKSVTQEALESAVLAKFKSLKHEAVWKKERPGNLKGDKE 1563
Query: 52 LKLYRIYPVGLTQRQAL 2
LK++RIYP+GLTQRQAL
Sbjct: 1564 LKIHRIYPLGLTQRQAL 1614
Score = 37.3 bits (75), Expect(3) = 4e-038
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = +3 / -2
Query: 90 FHTGTWLRDLNLPSTADSKAPRVNWPDLM*MLSDLNRPLS 209
FHT + +DLNL TADS+A V L S NRPLS
Sbjct: 1526 FHTASCFKDLNLARTADSRAS*VTLLPLKKTDSISNRPLS 1407
Score = 26.3 bits (51), Expect(3) = 4e-038
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2 / -1
Query: 2 QSLTLR*TDWVNSV*FQVIPTSNARWPFILPY 97
QSL+LR* VN + F++ + PF+LP+
Sbjct: 1614 QSLSLR*AKRVNPMYFKLFVSF*VSRPFLLPH 1519
>emb|AJ404861.2|ATH404861 Arabidopsis thaliana mRNA for truncated alpha1,3-fucosyltransferase
(FucTB gene)
Length = 1834
Score = 213 bits (459), Expect(2) = 1e-084
Identities = 82/131 (62%), Positives = 99/131 (75%)
Frame = -1 / +2
Query: 637 RYRFSXXFEXXXEXDYXXEKFFQXXVXGSIPVVVGAPNIQEFXPGEGAILHIXXLDDVAS 458
RY+FS FE E DY EKFFQ V GS+PVVVG PNI+EF P + LHI ++DV
Sbjct: 890 RYKFSLAFENTNEEDYVTEKFFQSLVAGSVPVVVGPPNIEEFAPASDSFLHIKTMEDVEP 1069
Query: 457 VAKTMKNIASNPDAFNQSLRWKYDGPSDSFKALIDMAAVHSSCRLCIHIATKIHLKEERT 278
VAK MK +A+NP A+NQ+LRWKY+GPSDSFKAL+DMAAVHSSCRLCI +AT++ +EE +
Sbjct: 1070 VAKRMKYLAANPAAYNQTLRWKYEGPSDSFKALVDMAAVHSSCRLCIFLATRVREQEEES 1249
Query: 277 PKFTNRPCSCS 245
P F RPC CS
Sbjct: 1250 PNFKKRPCKCS 1282
Score = 134 bits (288), Expect(3) = 4e-038
Identities = 69/127 (54%), Positives = 81/127 (63%)
Frame = +3 / -2
Query: 252 LQGRFVNFGVLSSFKWILVAICIQRRQDE*TAAMSIRALKESDGPSYFHLKD*LKASGFE 431
L GRF+ G+ SS LVA +QRRQ+E TAA+S ALKES+GPSYFHL *L A+G
Sbjct: 1275 LHGRFLKLGLSSSCSRTLVARKMQRRQEECTAAISTSALKESEGPSYFHLSV*L*AAGLA 1096
Query: 432 AIFFIVLATEATSSSXLICNIAPSPGXNS*IFGAPTTTGIEPXTXX*KNFSXX*SXSXXX 611
A +FI+ AT +TSS L+ G NS IFG PTTTG +P T *KNFS *S S
Sbjct: 1095 ARYFILFATGSTSSIVLM*RNESEAGANSSIFGGPTTTGTDPATKD*KNFSVT*SSSLVF 916
Query: 612 SNXXLNL 632
S LNL
Sbjct: 915 SKAKLNL 895
Score = 122 bits (262), Expect(2) = 1e-084
Identities = 47/77 (61%), Positives = 63/77 (81%)
Frame = -1 / +2
Query: 232 TIYHLFIRERGRFKSESIYMRSGQLTLGALESAVLGKFRSLNHVPVWKDERPPSIRGGDD 53
T+YH+F+RERGRF+ ES+++R +T ALESAVL KF+SL H VWK ERP +++G +
Sbjct: 1298 TVYHVFVRERGRFEMESVFLRGKSVTQEALESAVLAKFKSLKHEAVWKKERPGNLKGDKE 1477
Query: 52 LKLYRIYPVGLTQRQAL 2
LK++RIYP+GLTQRQAL
Sbjct: 1478 LKIHRIYPLGLTQRQAL 1528
Score = 37.3 bits (75), Expect(3) = 4e-038
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = +3 / -2
Query: 90 FHTGTWLRDLNLPSTADSKAPRVNWPDLM*MLSDLNRPLS 209
FHT + +DLNL TADS+A V L S NRPLS
Sbjct: 1440 FHTASCFKDLNLARTADSRAS*VTLLPLKKTDSISNRPLS 1321
Score = 26.3 bits (51), Expect(3) = 4e-038
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2 / -1
Query: 2 QSLTLR*TDWVNSV*FQVIPTSNARWPFILPY 97
QSL+LR* VN + F++ + PF+LP+
Sbjct: 1528 QSLSLR*AKRVNPMYFKLFVSF*VSRPFLLPH 1433
>gb|BT002570.1| Arabidopsis thaliana Putative fucosyltransferase (At1g49710) mRNA,
complete cds
Length = 1725
Score = 213 bits (459), Expect(2) = 1e-084
Identities = 82/131 (62%), Positives = 99/131 (75%)
Frame = -1 / +1
Query: 637 RYRFSXXFEXXXEXDYXXEKFFQXXVXGSIPVVVGAPNIQEFXPGEGAILHIXXLDDVAS 458
RY+FS FE E DY EKFFQ V GS+PVVVG PNI+EF P + LHI ++DV
Sbjct: 817 RYKFSLAFENTNEEDYVTEKFFQSLVAGSVPVVVGPPNIEEFAPASDSFLHIKTMEDVEP 996
Query: 457 VAKTMKNIASNPDAFNQSLRWKYDGPSDSFKALIDMAAVHSSCRLCIHIATKIHLKEERT 278
VAK MK +A+NP A+NQ+LRWKY+GPSDSFKAL+DMAAVHSSCRLCI +AT++ +EE +
Sbjct: 997 VAKRMKYLAANPAAYNQTLRWKYEGPSDSFKALVDMAAVHSSCRLCIFLATRVREQEEES 1176
Query: 277 PKFTNRPCSCS 245
P F RPC CS
Sbjct: 1177 PNFKKRPCKCS 1209
Score = 134 bits (288), Expect(3) = 4e-038
Identities = 69/127 (54%), Positives = 81/127 (63%)
Frame = +3 / -2
Query: 252 LQGRFVNFGVLSSFKWILVAICIQRRQDE*TAAMSIRALKESDGPSYFHLKD*LKASGFE 431
L GRF+ G+ SS LVA +QRRQ+E TAA+S ALKES+GPSYFHL *L A+G
Sbjct: 1202 LHGRFLKLGLSSSCSRTLVARKMQRRQEECTAAISTSALKESEGPSYFHLSV*L*AAGLA 1023
Query: 432 AIFFIVLATEATSSSXLICNIAPSPGXNS*IFGAPTTTGIEPXTXX*KNFSXX*SXSXXX 611
A +FI+ AT +TSS L+ G NS IFG PTTTG +P T *KNFS *S S
Sbjct: 1022 ARYFILFATGSTSSIVLM*RNESEAGANSSIFGGPTTTGTDPATKD*KNFSVT*SSSLVF 843
Query: 612 SNXXLNL 632
S LNL
Sbjct: 842 SKAKLNL 822
Score = 122 bits (262), Expect(2) = 1e-084
Identities = 47/77 (61%), Positives = 63/77 (81%)
Frame = -1 / +1
Query: 232 TIYHLFIRERGRFKSESIYMRSGQLTLGALESAVLGKFRSLNHVPVWKDERPPSIRGGDD 53
T+YH+F+RERGRF+ ES+++R +T ALESAVL KF+SL H VWK ERP +++G +
Sbjct: 1225 TVYHVFVRERGRFEMESVFLRGKSVTQEALESAVLAKFKSLKHEAVWKKERPGNLKGDKE 1404
Query: 52 LKLYRIYPVGLTQRQAL 2
LK++RIYP+GLTQRQAL
Sbjct: 1405 LKIHRIYPLGLTQRQAL 1455
Score = 37.3 bits (75), Expect(3) = 4e-038
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = +3 / -2
Query: 90 FHTGTWLRDLNLPSTADSKAPRVNWPDLM*MLSDLNRPLS 209
FHT + +DLNL TADS+A V L S NRPLS
Sbjct: 1367 FHTASCFKDLNLARTADSRAS*VTLLPLKKTDSISNRPLS 1248
Score = 26.3 bits (51), Expect(3) = 4e-038
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2 / -1
Query: 2 QSLTLR*TDWVNSV*FQVIPTSNARWPFILPY 97
QSL+LR* VN + F++ + PF+LP+
Sbjct: 1455 QSLSLR*AKRVNPMYFKLFVSF*VSRPFLLPH 1360
>gb|AY184991.1| Arabidopsis thaliana alpha 1, 3-fucosyltransferase-like protein mRNA,
complete cds; alternatively spliced
Length = 1568
Score = 213 bits (459), Expect(2) = 1e-084
Identities = 82/131 (62%), Positives = 99/131 (75%)
Frame = -1 / +3
Query: 637 RYRFSXXFEXXXEXDYXXEKFFQXXVXGSIPVVVGAPNIQEFXPGEGAILHIXXLDDVAS 458
RY+FS FE E DY EKFFQ V GS+PVVVG PNI+EF P + LHI ++DV
Sbjct: 825 RYKFSLAFENTNEEDYVTEKFFQSLVAGSVPVVVGPPNIEEFAPASDSFLHIKTMEDVEP 1004
Query: 457 VAKTMKNIASNPDAFNQSLRWKYDGPSDSFKALIDMAAVHSSCRLCIHIATKIHLKEERT 278
VAK MK +A+NP A+NQ+LRWKY+GPSDSFKAL+DMAAVHSSCRLCI +AT++ +EE +
Sbjct: 1005 VAKRMKYLAANPAAYNQTLRWKYEGPSDSFKALVDMAAVHSSCRLCIFLATRVREQEEES 1184
Query: 277 PKFTNRPCSCS 245
P F RPC CS
Sbjct: 1185 PNFKKRPCKCS 1217
Score = 134 bits (288), Expect(4) = 1e-039
Identities = 69/127 (54%), Positives = 81/127 (63%)
Frame = +3 / -2
Query: 252 LQGRFVNFGVLSSFKWILVAICIQRRQDE*TAAMSIRALKESDGPSYFHLKD*LKASGFE 431
L GRF+ G+ SS LVA +QRRQ+E TAA+S ALKES+GPSYFHL *L A+G
Sbjct: 1210 LHGRFLKLGLSSSCSRTLVARKMQRRQEECTAAISTSALKESEGPSYFHLSV*L*AAGLA 1031
Query: 432 AIFFIVLATEATSSSXLICNIAPSPGXNS*IFGAPTTTGIEPXTXX*KNFSXX*SXSXXX 611
A +FI+ AT +TSS L+ G NS IFG PTTTG +P T *KNFS *S S
Sbjct: 1030 ARYFILFATGSTSSIVLM*RNESEAGANSSIFGGPTTTGTDPATKD*KNFSVT*SSSLVF 851
Query: 612 SNXXLNL 632
S LNL
Sbjct: 850 SKAKLNL 830
Score = 122 bits (262), Expect(2) = 1e-084
Identities = 47/77 (61%), Positives = 63/77 (81%)
Frame = -1 / +3
Query: 232 TIYHLFIRERGRFKSESIYMRSGQLTLGALESAVLGKFRSLNHVPVWKDERPPSIRGGDD 53
T+YH+F+RERGRF+ ES+++R +T ALESAVL KF+SL H VWK ERP +++G +
Sbjct: 1233 TVYHVFVRERGRFEMESVFLRGKSVTQEALESAVLAKFKSLKHEAVWKKERPGNLKGDKE 1412
Query: 52 LKLYRIYPVGLTQRQAL 2
LK++RIYP+GLTQRQAL
Sbjct: 1413 LKIHRIYPLGLTQRQAL 1463
Score = 37.3 bits (75), Expect(4) = 1e-039
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = +3 / -2
Query: 90 FHTGTWLRDLNLPSTADSKAPRVNWPDLM*MLSDLNRPLS 209
FHT + +DLNL TADS+A V L S NRPLS
Sbjct: 1375 FHTASCFKDLNLARTADSRAS*VTLLPLKKTDSISNRPLS 1256
Score = 26.3 bits (51), Expect(4) = 1e-039
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2 / -1
Query: 2 QSLTLR*TDWVNSV*FQVIPTSNARWPFILPY 97
QSL+LR* VN + F++ + PF+LP+
Sbjct: 1463 QSLSLR*AKRVNPMYFKLFVSF*VSRPFLLPH 1368
Score = 23.1 bits (44), Expect(4) = 1e-039
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +2 / -1
Query: 191 LKPPSLSDK*VVNC 232
LKP S S+K ++NC
Sbjct: 1274 LKPASFSNKNMINC 1233
>emb|AJ345085.1|ATH345085 Arabidopsis thaliana mRNA for core-alpha1,3fucosyltransferase 2
(fucT2 gene)
Length = 1542
Score = 213 bits (459), Expect(2) = 1e-084
Identities = 82/131 (62%), Positives = 99/131 (75%)
Frame = -1 / +1
Query: 637 RYRFSXXFEXXXEXDYXXEKFFQXXVXGSIPVVVGAPNIQEFXPGEGAILHIXXLDDVAS 458
RY+FS FE E DY EKFFQ V GS+PVVVG PNI+EF P + LHI ++DV
Sbjct: 817 RYKFSLAFENTNEEDYVTEKFFQSLVAGSVPVVVGPPNIEEFAPASDSFLHIKTMEDVEP 996
Query: 457 VAKTMKNIASNPDAFNQSLRWKYDGPSDSFKALIDMAAVHSSCRLCIHIATKIHLKEERT 278
VAK MK +A+NP A+NQ+LRWKY+GPSDSFKAL+DMAAVHSSCRLCI +AT++ +EE +
Sbjct: 997 VAKRMKYLAANPAAYNQTLRWKYEGPSDSFKALVDMAAVHSSCRLCIFLATRVREQEEES 1176
Query: 277 PKFTNRPCSCS 245
P F RPC CS
Sbjct: 1177 PNFKKRPCKCS 1209
Score = 134 bits (288), Expect(3) = 4e-038
Identities = 69/127 (54%), Positives = 81/127 (63%)
Frame = +3 / -2
Query: 252 LQGRFVNFGVLSSFKWILVAICIQRRQDE*TAAMSIRALKESDGPSYFHLKD*LKASGFE 431
L GRF+ G+ SS LVA +QRRQ+E TAA+S ALKES+GPSYFHL *L A+G
Sbjct: 1202 LHGRFLKLGLSSSCSRTLVARKMQRRQEECTAAISTSALKESEGPSYFHLSV*L*AAGLA 1023
Query: 432 AIFFIVLATEATSSSXLICNIAPSPGXNS*IFGAPTTTGIEPXTXX*KNFSXX*SXSXXX 611
A +FI+ AT +TSS L+ G NS IFG PTTTG +P T *KNFS *S S
Sbjct: 1022 ARYFILFATGSTSSIVLM*RNESEAGANSSIFGGPTTTGTDPATKD*KNFSVT*SSSLVF 843
Query: 612 SNXXLNL 632
S LNL
Sbjct: 842 SKAKLNL 822
Score = 122 bits (262), Expect(2) = 1e-084
Identities = 47/77 (61%), Positives = 63/77 (81%)
Frame = -1 / +1
Query: 232 TIYHLFIRERGRFKSESIYMRSGQLTLGALESAVLGKFRSLNHVPVWKDERPPSIRGGDD 53
T+YH+F+RERGRF+ ES+++R +T ALESAVL KF+SL H VWK ERP +++G +
Sbjct: 1225 TVYHVFVRERGRFEMESVFLRGKSVTQEALESAVLAKFKSLKHEAVWKKERPGNLKGDKE 1404
Query: 52 LKLYRIYPVGLTQRQAL 2
LK++RIYP+GLTQRQAL
Sbjct: 1405 LKIHRIYPLGLTQRQAL 1455
Score = 37.3 bits (75), Expect(3) = 4e-038
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = +3 / -2
Query: 90 FHTGTWLRDLNLPSTADSKAPRVNWPDLM*MLSDLNRPLS 209
FHT + +DLNL TADS+A V L S NRPLS
Sbjct: 1367 FHTASCFKDLNLARTADSRAS*VTLLPLKKTDSISNRPLS 1248
Score = 26.3 bits (51), Expect(3) = 4e-038
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2 / -1
Query: 2 QSLTLR*TDWVNSV*FQVIPTSNARWPFILPY 97
QSL+LR* VN + F++ + PF+LP+
Sbjct: 1455 QSLSLR*AKRVNPMYFKLFVSF*VSRPFLLPH 1360
>gb|AY184990.1| Arabidopsis thaliana core alpha 1, 3-fucosyltransferase mRNA,
complete cds
Length = 1607
Score = 212 bits (458), Expect(2) = 1e-084
Identities = 82/131 (62%), Positives = 98/131 (74%)
Frame = -1 / +3
Query: 637 RYRFSXXFEXXXEXDYXXEKFFQXXVXGSIPVVVGAPNIQEFXPGEGAILHIXXLDDVAS 458
RY+FS FE E DY EKFFQ V GS+PVVVG PNI+EF P LHI ++DV
Sbjct: 864 RYKFSLAFENTNEEDYVTEKFFQSLVAGSVPVVVGPPNIEEFAPASDTFLHIKTMEDVEP 1043
Query: 457 VAKTMKNIASNPDAFNQSLRWKYDGPSDSFKALIDMAAVHSSCRLCIHIATKIHLKEERT 278
VAK MK +A+NP A+NQ+LRWKY+GPSDSFKAL+DMAAVHSSCRLCI +AT++ +EE +
Sbjct: 1044 VAKRMKYLAANPAAYNQTLRWKYEGPSDSFKALVDMAAVHSSCRLCIFLATRVREQEEES 1223
Query: 277 PKFTNRPCSCS 245
P F RPC CS
Sbjct: 1224 PNFKKRPCKCS 1256
Score = 135 bits (289), Expect(3) = 3e-038
Identities = 69/127 (54%), Positives = 81/127 (63%)
Frame = +3 / -2
Query: 252 LQGRFVNFGVLSSFKWILVAICIQRRQDE*TAAMSIRALKESDGPSYFHLKD*LKASGFE 431
L GRF+ G+ SS LVA +QRRQ+E TAA+S ALKES+GPSYFHL *L A+G
Sbjct: 1249 LHGRFLKLGLSSSCSRTLVARKMQRRQEECTAAISTSALKESEGPSYFHLSV*L*AAGLA 1070
Query: 432 AIFFIVLATEATSSSXLICNIAPSPGXNS*IFGAPTTTGIEPXTXX*KNFSXX*SXSXXX 611
A +FI+ AT +TSS L+ G NS IFG PTTTG +P T *KNFS *S S
Sbjct: 1069 ARYFILFATGSTSSIVLM*RNVSEAGANSSIFGGPTTTGTDPATKD*KNFSVT*SSSLVF 890
Query: 612 SNXXLNL 632
S LNL
Sbjct: 889 SKAKLNL 869
Score = 122 bits (262), Expect(2) = 1e-084
Identities = 47/77 (61%), Positives = 63/77 (81%)
Frame = -1 / +3
Query: 232 TIYHLFIRERGRFKSESIYMRSGQLTLGALESAVLGKFRSLNHVPVWKDERPPSIRGGDD 53
T+YH+F+RERGRF+ ES+++R +T ALESAVL KF+SL H VWK ERP +++G +
Sbjct: 1272 TVYHVFVRERGRFEMESVFLRGKSVTQEALESAVLAKFKSLKHEAVWKKERPGNLKGDKE 1451
Query: 52 LKLYRIYPVGLTQRQAL 2
LK++RIYP+GLTQRQAL
Sbjct: 1452 LKIHRIYPLGLTQRQAL 1502
Score = 37.3 bits (75), Expect(3) = 3e-038
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = +3 / -2
Query: 90 FHTGTWLRDLNLPSTADSKAPRVNWPDLM*MLSDLNRPLS 209
FHT + +DLNL TADS+A V L S NRPLS
Sbjct: 1414 FHTASCFKDLNLARTADSRAS*VTLLPLKKTDSISNRPLS 1295
Score = 26.3 bits (51), Expect(3) = 3e-038
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2 / -1
Query: 2 QSLTLR*TDWVNSV*FQVIPTSNARWPFILPY 97
QSL+LR* VN + F++ + PF+LP+
Sbjct: 1502 QSLSLR*AKRVNPMYFKLFVSF*VSRPFLLPH 1407
>dbj|AP000419.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MVI11
Length = 81875
Score = 138 bits (297), Expect(3) = 6e-073
Identities = 50/78 (64%), Positives = 66/78 (84%)
Frame = -1 / -1
Query: 403 LRWKYDGPSDSFKALIDMAAVHSSCRLCIHIATKIHLKEERTPKFTNRPCSCSTKKGTIY 224
+RWK++GPSDSFKALIDMAAVHSSCRLCI +AT+I +EE++P+F RPC C+ T+Y
Sbjct: 77075 IRWKHEGPSDSFKALIDMAAVHSSCRLCIFVATRIREQEEKSPEFKRRPCKCTRGSETVY 76896
Query: 223 HLFIRERGRFKSESIYMR 170
HL++RERGRF ESI+++
Sbjct: 76895 HLYVRERGRFDMESIFLK 76842
Score = 90.0 bits (190), Expect(3) = 6e-073
Identities = 37/57 (64%), Positives = 44/57 (77%)
Frame = -1 / -3
Query: 172 RSGQLTLGALESAVLGKFRSLNHVPVWKDERPPSIRGGDDLKLYRIYPVGLTQRQAL 2
R G LTL ALESAVL KF SL + P+WK ERP S+RG L+++ IYP+GLTQRQAL
Sbjct: 76767 RDGNLTLEALESAVLAKFMSLRYEPIWKKERPASLRGDGKLRVHGIYPIGLTQRQAL 76597
Score = 86.8 bits (183), Expect(3) = 6e-073
Identities = 34/53 (64%), Positives = 42/53 (79%)
Frame = -1 / -1
Query: 556 GSIPVVVGAPNIQEFXPGEGAILHIXXLDDVASVAKTMKNIASNPDAFNQSLR 398
GS+PVVVGAPNI+EF P + LHI +DDV +VAK MK +A NPDA+NQ+LR
Sbjct: 77306 GSVPVVVGAPNIEEFAPSPDSFLHIKQMDDVKAVAKKMKYLADNPDAYNQTLR 77148
Score = 79.4 bits (167), Expect(3) = 1e-032
Identities = 41/69 (59%), Positives = 48/69 (69%)
Frame = +3 / +1
Query: 195 NRPLSRINKW*IVPFLVEQLQGRFVNFGVLSSFKWILVAICIQRRQDE*TAAMSIRALKE 374
NRPLS K * V + LQGR +N G+ SS ILVA +QRRQ+E TAA+SI ALKE
Sbjct: 76867 NRPLSLTYK**TVSEPLVHLQGRLLNSGLFSSCSRILVATKMQRRQEECTAAISISALKE 77046
Query: 375 SDGPSYFHL 401
S+GPS FHL
Sbjct: 77047 SEGPSCFHL 77073
Score = 56.1 bits (116), Expect(3) = 1e-032
Identities = 29/54 (53%), Positives = 32/54 (59%)
Frame = +3 / +1
Query: 396 HLKD*LKASGFEAIFFIVLATEATSSSXLICNIAPSPGXNS*IFGAPTTTGIEP 557
HL *L ASG A +FI AT TSS L+ G NS IFGAPTTTG +P
Sbjct: 77146 HLSV*L*ASGLSARYFIFFATALTSSICLM*RNESGEGANSSIFGAPTTTGTDP 77307
Score = 44.1 bits (90), Expect(3) = 1e-032
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +3 / +2
Query: 90 FHTGTWLRDLNLPSTADSKAPRVNWPDLM 176
FH G++LRD+N TADS+A RV +P L+
Sbjct: 76685 FHIGSYLRDMNFARTADSRASRVRFPSLL 76771
>gb|B67847.1|B67847 T24K12TR TAMU Arabidopsis thaliana genomic clone T24K12, DNA
sequence
Length = 669
Score = 138 bits (297), Expect(3) = 3e-064
Identities = 50/78 (64%), Positives = 66/78 (84%)
Frame = -1 / -1
Query: 403 LRWKYDGPSDSFKALIDMAAVHSSCRLCIHIATKIHLKEERTPKFTNRPCSCSTKKGTIY 224
+RWK++GPSDSFKALIDMAAVHSSCRLCI +AT+I +EE++P+F RPC C+ T+Y
Sbjct: 432 IRWKHEGPSDSFKALIDMAAVHSSCRLCIFVATRIREQEEKSPEFKRRPCKCTRGSETVY 253
Query: 223 HLFIRERGRFKSESIYMR 170
HL++RERGRF ESI+++
Sbjct: 252 HLYVRERGRFDMESIFLK 199
Score = 86.8 bits (183), Expect(3) = 3e-064
Identities = 34/53 (64%), Positives = 42/53 (79%)
Frame = -1 / -1
Query: 556 GSIPVVVGAPNIQEFXPGEGAILHIXXLDDVASVAKTMKNIASNPDAFNQSLR 398
GS+PVVVGAPNI+EF P + LHI +DDV +VAK MK +A NPDA+NQ+LR
Sbjct: 663 GSVPVVVGAPNIEEFAPSPDSFLHIKQMDDVKAVAKKMKYLADNPDAYNQTLR 505
Score = 79.4 bits (167), Expect(3) = 2e-032
Identities = 41/69 (59%), Positives = 48/69 (69%)
Frame = +3 / +2
Query: 195 NRPLSRINKW*IVPFLVEQLQGRFVNFGVLSSFKWILVAICIQRRQDE*TAAMSIRALKE 374
NRPLS K * V + LQGR +N G+ SS ILVA +QRRQ+E TAA+SI ALKE
Sbjct: 224 NRPLSLTYK**TVSEPLVHLQGRLLNSGLFSSCSRILVATKMQRRQEECTAAISISALKE 403
Query: 375 SDGPSYFHL 401
S+GPS FHL
Sbjct: 404 SEGPSCFHL 430
Score = 61.1 bits (127), Expect(3) = 3e-064
Identities = 25/37 (67%), Positives = 28/37 (75%)
Frame = -1 / -3
Query: 172 RSGQLTLGALESAVLGKFRSLNHVPVWKDERPPSIRG 62
R G LTL ALESAVL KF SL + P+WK ERP S+RG
Sbjct: 124 RDGNLTLEALESAVLAKFMSLRYEPIWKKERPASLRG 14
Score = 56.1 bits (116), Expect(3) = 2e-032
Identities = 29/54 (53%), Positives = 32/54 (59%)
Frame = +3 / +2
Query: 396 HLKD*LKASGFEAIFFIVLATEATSSSXLICNIAPSPGXNS*IFGAPTTTGIEP 557
HL *L ASG A +FI AT TSS L+ G NS IFGAPTTTG +P
Sbjct: 503 HLSV*L*ASGLSARYFIFFATALTSSICLM*RNESGEGANSSIFGAPTTTGTDP 664
Score = 44.1 bits (90), Expect(3) = 2e-032
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +3 / +3
Query: 90 FHTGTWLRDLNLPSTADSKAPRVNWPDLM 176
FH G++LRD+N TADS+A RV +P L+
Sbjct: 42 FHIGSYLRDMNFARTADSRASRVRFPSLL 128
>gb|CK120486.1|CK120486 218i09.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011I09218
5-PRIME, mRNA sequence
Length = 800
Score = 213 bits (460), Expect = 4e-054
Identities = 82/131 (62%), Positives = 99/131 (75%)
Frame = -1 / +3
Query: 637 RYRFSXXFEXXXEXDYXXEKFFQXXVXGSIPVVVGAPNIQEFXPGEGAILHIXXLDDVAS 458
RY+FS FE E DY EKFFQ V GS+PVVVG PNI+EF P + LHI ++DV
Sbjct: 393 RYKFSLAFENTNEEDYVTEKFFQSLVAGSVPVVVGPPNIEEFAPASDSFLHIKTMEDVEP 572
Query: 457 VAKTMKNIASNPDAFNQSLRWKYDGPSDSFKALIDMAAVHSSCRLCIHIATKIHLKEERT 278
VAK MK +A+NP A+NQ+LRWKY+GPSDSFKAL+DMAAVHSSCRLCI +AT++ +EE +
Sbjct: 573 VAKRMKYLAANPAAYNQTLRWKYEGPSDSFKALVDMAAVHSSCRLCIFLATRVREQEEES 752
Query: 277 PKFTNRPCSCS 245
P F RPC CS
Sbjct: 753 PNFXERPCKCS 785
Score = 130 bits (278), Expect = 5e-029
Identities = 68/127 (53%), Positives = 79/127 (62%)
Frame = +3 / -2
Query: 252 LQGRFVNFGVLSSFKWILVAICIQRRQDE*TAAMSIRALKESDGPSYFHLKD*LKASGFE 431
L GR G+ SS LVA +QRRQ+E TAA+S ALKES+GPSYFHL *L A+G
Sbjct: 778 LHGRSXKLGLSSSCSRTLVARKMQRRQEECTAAISTSALKESEGPSYFHLSV*L*AAGLA 599
Query: 432 AIFFIVLATEATSSSXLICNIAPSPGXNS*IFGAPTTTGIEPXTXX*KNFSXX*SXSXXX 611
A +FI+ AT +TSS L+ G NS IFG PTTTG +P T *KNFS *S S
Sbjct: 598 ARYFILFATGSTSSIVLM*RNESEAGANSSIFGGPTTTGTDPATKD*KNFSVT*SSSLVF 419
Query: 612 SNXXLNL 632
S LNL
Sbjct: 418 SKAKLNL 398
>emb|AL093853.1|CNS00WOV Arabidopsis thaliana genome survey sequence SP6 end of BAC T12B16
of TAMU library from strain Columbia of Arabidopsis
thaliana, genomic survey sequence
Length = 543
Score = 138 bits (297), Expect(3) = 5e-047
Identities = 50/78 (64%), Positives = 66/78 (84%)
Frame = -1 / -2
Query: 403 LRWKYDGPSDSFKALIDMAAVHSSCRLCIHIATKIHLKEERTPKFTNRPCSCSTKKGTIY 224
+RWK++GPSDSFKALIDMAAVHSSCRLCI +AT+I +EE++P+F RPC C+ T+Y
Sbjct: 425 IRWKHEGPSDSFKALIDMAAVHSSCRLCIFVATRIREQEEKSPEFKRRPCKCTRGSETVY 246
Query: 223 HLFIRERGRFKSESIYMR 170
HL++RERGRF ESI+++
Sbjct: 245 HLYVRERGRFDMESIFLK 192
Score = 79.4 bits (167), Expect(2) = 3e-021
Identities = 41/69 (59%), Positives = 48/69 (69%)
Frame = +3 / +1
Query: 195 NRPLSRINKW*IVPFLVEQLQGRFVNFGVLSSFKWILVAICIQRRQDE*TAAMSIRALKE 374
NRPLS K * V + LQGR +N G+ SS ILVA +QRRQ+E TAA+SI ALKE
Sbjct: 217 NRPLSLTYK**TVSEPLVHLQGRLLNSGLFSSCSRILVATKMQRRQEECTAAISISALKE 396
Query: 375 SDGPSYFHL 401
S+GPS FHL
Sbjct: 397 SEGPSCFHL 423
Score = 61.1 bits (127), Expect(3) = 5e-047
Identities = 25/37 (67%), Positives = 28/37 (75%)
Frame = -1 / -1
Query: 172 RSGQLTLGALESAVLGKFRSLNHVPVWKDERPPSIRG 62
R G LTL ALESAVL KF SL + P+WK ERP S+RG
Sbjct: 117 RDGNLTLEALESAVLAKFMSLRYEPIWKKERPASLRG 7
Score = 44.1 bits (90), Expect(2) = 3e-021
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +3 / +2
Query: 90 FHTGTWLRDLNLPSTADSKAPRVNWPDLM 176
FH G++LRD+N TADS+A RV +P L+
Sbjct: 35 FHIGSYLRDMNFARTADSRASRVRFPSLL 121
Score = 28.6 bits (56), Expect(3) = 5e-047
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = -1 / -2
Query: 442 KNIASNPDAFNQSLR 398
K +A NPDA+NQ+LR
Sbjct: 542 KYLADNPDAYNQTLR 498
>gb|AC011807.4|AC011807 Arabidopsis thaliana chromosome I BAC F14J22 genomic sequence, complete
sequence
Length = 104679
Score = 103 bits (220), Expect(3) = 1e-042
Identities = 39/65 (60%), Positives = 46/65 (70%)
Frame = -1 / +3
Query: 439 NIASNPDAFNQSLRWKYDGPSDSFKALIDMAAVHSSCRLCIHIATKIHLKEERTPKFTNR 260
N F RWKY+GPSDSFKAL+DMAAVHSSCRLCI +AT++ +EE +P F R
Sbjct: 44619 NFFLKASCFCFGFRWKYEGPSDSFKALVDMAAVHSSCRLCIFLATRVREQEEESPNFKKR 44798
Query: 259 PCSCS 245
PC CS
Sbjct: 44799 PCKCS 44813
Score = 85.8 bits (181), Expect(3) = 1e-042
Identities = 35/60 (58%), Positives = 45/60 (75%)
Frame = -1 / +1
Query: 181 IYMRSGQLTLGALESAVLGKFRSLNHVPVWKDERPPSIRGGDDLKLYRIYPVGLTQRQAL 2
+ R +T ALESAVL KF+SL H VWK ERP +++G +LK++RIYP+GLTQRQAL
Sbjct: 44968 VQSRGKSVTQEALESAVLAKFKSLKHEAVWKKERPGNLKGDKELKIHRIYPLGLTQRQAL 45147
Score = 41.4 bits (84), Expect(3) = 1e-042
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = -1 / +2
Query: 637 RYRFSXXFEXXXEXDYXXEKFFQXXVXG 554
RY+FS FE E DY EKFFQ V G
Sbjct: 44216 RYKFSLAFENTNEEDYVTEKFFQSLVAG 44299
>gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom arm complete sequence
Length = 14668883
Score = 103 bits (220), Expect(3) = 2e-038
Identities = 39/65 (60%), Positives = 46/65 (70%)
Frame = -1 / -2
Query: 439 NIASNPDAFNQSLRWKYDGPSDSFKALIDMAAVHSSCRLCIHIATKIHLKEERTPKFTNR 260
N F RWKY+GPSDSFKAL+DMAAVHSSCRLCI +AT++ +EE +P F R
Sbjct: 2751499 NFFLKASCFCFGFRWKYEGPSDSFKALVDMAAVHSSCRLCIFLATRVREQEEESPNFKKR 2751320
Query: 259 PCSCS 245
PC CS
Sbjct: 2751319 PCKCS 2751305
Score = 85.8 bits (181), Expect(3) = 2e-038
Identities = 35/60 (58%), Positives = 45/60 (75%)
Frame = -1 / -3
Query: 181 IYMRSGQLTLGALESAVLGKFRSLNHVPVWKDERPPSIRGGDDLKLYRIYPVGLTQRQAL 2
+ R +T ALESAVL KF+SL H VWK ERP +++G +LK++RIYP+GLTQRQAL
Sbjct: 2751150 VQSRGKSVTQEALESAVLAKFKSLKHEAVWKKERPGNLKGDKELKIHRIYPLGLTQRQAL 2750971
Score = 41.4 bits (84), Expect(3) = 2e-038
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = -1 / -1
Query: 637 RYRFSXXFEXXXEXDYXXEKFFQXXVXG 554
RY+FS FE E DY EKFFQ V G
Sbjct: 2751902 RYKFSLAFENTNEEDYVTEKFFQSLVAG 2751819
>dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complete sequence
Length = 23403063
Score = 138 bits (297), Expect = 1e-031
Identities = 50/78 (64%), Positives = 66/78 (84%)
Frame = -1 / -3
Query: 403 LRWKYDGPSDSFKALIDMAAVHSSCRLCIHIATKIHLKEERTPKFTNRPCSCSTKKGTIY 224
+RWK++GPSDSFKALIDMAAVHSSCRLCI +AT+I +EE++P+F RPC C+ T+Y
Sbjct: 6653260 IRWKHEGPSDSFKALIDMAAVHSSCRLCIFVATRIREQEEKSPEFKRRPCKCTRGSETVY 6653081
Query: 223 HLFIRERGRFKSESIYMR 170
HL++RERGRF ESI+++
Sbjct: 6653080 HLYVRERGRFDMESIFLK 6653027
>ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complete sequence
Length = 23470805
Score = 138 bits (297), Expect = 1e-031
Identities = 50/78 (64%), Positives = 66/78 (84%)
Frame = -1 / -1
Query: 403 LRWKYDGPSDSFKALIDMAAVHSSCRLCIHIATKIHLKEERTPKFTNRPCSCSTKKGTIY 224
+RWK++GPSDSFKALIDMAAVHSSCRLCI +AT+I +EE++P+F RPC C+ T+Y
Sbjct: 6681980 IRWKHEGPSDSFKALIDMAAVHSSCRLCIFVATRIREQEEKSPEFKRRPCKCTRGSETVY 6681801
Query: 223 HLFIRERGRFKSESIYMR 170
HL++RERGRF ESI+++
Sbjct: 6681800 HLYVRERGRFDMESIFLK 6681747
>gb|BX835636.1|BX835636 BX835636 Arabidopsis thaliana Adult vegetative tissue Col-0
Arabidopsis thaliana cDNA clone GSLTLS94ZE07 3PRIM, mRNA
sequence
Length = 548
Score = 116 bits (249), Expect = 5e-025
Identities = 46/77 (59%), Positives = 61/77 (79%)
Frame = -1 / -3
Query: 232 TIYHLFIRERGRFKSESIYMRSGQLTLGALESAVLGKFRSLNHVPVWKDERPPSIRGGDD 53
T+YH+F+RERGR + ES+ +R +T ALESAVL KF+SL H VWK ERP +++G +
Sbjct: 516 TVYHVFVRERGRSEMESVSLRGKSVTQEALESAVLAKFKSLKHEAVWKKERPGNLKGDKE 337
Query: 52 LKLYRIYPVGLTQRQAL 2
LK++RIYP+GLTQRQAL
Sbjct: 336 LKIHRIYPLGLTQRQAL 286
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 103 bits (220), Expect = 5e-021
Identities = 39/65 (60%), Positives = 46/65 (70%)
Frame = -1 / -2
Query: 439 NIASNPDAFNQSLRWKYDGPSDSFKALIDMAAVHSSCRLCIHIATKIHLKEERTPKFTNR 260
N F RWKY+GPSDSFKAL+DMAAVHSSCRLCI +AT++ +EE +P F R
Sbjct: 18395905 NFFLKASCFCFGFRWKYEGPSDSFKALVDMAAVHSSCRLCIFLATRVREQEEESPNFKKR 18395726
Query: 259 PCSCS 245
PC CS
Sbjct: 18395725 PCKCS 18395711
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,199,414,728
Number of Sequences: 1013581
Number of extensions: 16008311
Number of successful extensions: 116868
Number of sequences better than 1.0e-020: 28
length of database: 302,980,290
effective HSP length: 55
effective length of database: 247,233,335
effective search space used: 38568400260
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)