TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBTB.006E19F020311.3.1
(789 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|NM_114647.3| Arabidopsis thaliana ATATH7; ATPase, coupl... 271 3e-082
gb|AY099665.1| Arabidopsis thaliana ABC-type transport prot... 270 6e-082
ref|NM_114646.3| Arabidopsis thaliana ATATH6; ATPase, coupl... 257 1e-074
emb|AX651802.1| Sequence 657 from Patent WO03000898 257 1e-074
ref|NM_114645.2| Arabidopsis thaliana ATATH5; ATPase, coupl... 234 3e-066
ref|NM_114643.3| Arabidopsis thaliana ATATH3; ATPase, coupl... 114 2e-065
emb|AL049746.1|ATT23J7 Arabidopsis thaliana DNA chromosome ... 106 5e-063
ref|NM_114642.2| Arabidopsis thaliana ATATH2; ATPase, coupl... 191 1e-062
ref|NM_114644.2| Arabidopsis thaliana ATATH4; ATPase, coupl... 147 2e-052
dbj|AB010069.1| Arabidopsis thaliana genomic DNA, chromosom... 138 2e-047
ref|NM_125564.1| Arabidopsis thaliana ATATH16; ATPase, coup... 115 4e-045
ref|NM_125568.1| Arabidopsis thaliana ATATH14; ATPase, coup... 113 2e-039
gb|CW845394.1|CW845394 GT12111.Ds3.08.28.2003.jx22.578 Arab... 119 3e-037
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 138 2e-031
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 138 2e-031
emb|AJ524255.1|ATH524255 Arabidopsis thaliana T-DNA flankin... 133 7e-031
emb|CR383992.1| Arabidopsis thaliana transposon insertion S... 112 1e-023
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 106 9e-022
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 106 9e-022
>ref|NM_114647.3| Arabidopsis thaliana ATATH7; ATPase, coupled to transmembrane
movement of substances AT3G47790 (ATATH7) mRNA, complete
cds
Length = 2960
Score = 271 bits (586), Expect(2) = 3e-082
Identities = 113/205 (55%), Positives = 141/205 (68%)
Frame = +2 / +1
Query: 173 QINEFIAGYDFLGTTQYGLGVNVWYNSTYNDNNAYSFISTLRVPRLVNAVSNAYLKLIKG 352
+INEF +DF T L V+VWYNSTY ++ ++ +RVPRLVN SNAYL+ +KG
Sbjct: 748 KINEFAGAFDFQNTNGNNLNVSVWYNSTYKNDTVVRPMALIRVPRLVNLASNAYLEFLKG 927
Query: 353 TGVDMLLEFVKDMPKVGTXXXXXXXXXXXXXXXTWIIELLFPVMLTYLVYEKQQKLRIMM 532
+ +L E+VK+MPK T TW+I LLFPV+LT LVYEKQQ+LRIMM
Sbjct: 928 SETKILFEYVKEMPKPETKLSLDIASLIGPLFFTWVILLLFPVILTTLVYEKQQRLRIMM 1107
Query: 533 KMHGLKDGPYWLISYSYFLALSIVYMLFFMIFGSLIGLNFFRVNEYSIQAVFFFVCINLQ 712
KMHGL D PYW++SY+YFL +SI+YML F IFGSLIGLNFFR+N+YSIQ VFFF+CINLQ
Sbjct: 1108 KMHGLGDVPYWIVSYTYFLLISILYMLCFAIFGSLIGLNFFRLNDYSIQLVFFFICINLQ 1287
Query: 713 IXXXXXXXXXXXXGKMATGMGYMYV 787
I K+AT + Y+YV
Sbjct: 1288 ISVAFLASAMFSDVKIATVIAYIYV 1362
Score = 86.3 bits (182), Expect(2) = 2e-022
Identities = 61/141 (43%), Positives = 66/141 (46%)
Frame = -1 / -1
Query: 597 DRARK*E*DISQ*GPSFRPXXXXXXXXXXXXSYTRYVNITGKRSSMIHVKNKTLRREDRS 418
D RK* + Q*G S P SYT V ITG + M HVK RE S
Sbjct: 1172 DIKRK*VYETIQ*GTSPSPCIFIMILNLCCFSYTSVVKITGNNNRMTHVKKSGPIREAMS 993
Query: 417 N*KLVPTLGISFTNSSSMSTPVPLINFR*ALDTAFTKRGTRNVEINEYALLSL*VELYQT 238
LV LGIS T S S+ P N R ALD TKRGTR I + L*VELYQT
Sbjct: 992 KLSLVSGLGISLTYSKSIFVSEPFRNSRYALDARLTKRGTRIRAIGRTTVSFL*VELYQT 813
Query: 237 FTPRPYCVVPKKS*PAINSFI 175
T R + V KS NS I
Sbjct: 812 LTLRLFPFVF*KSKAPANSLI 750
Score = 57.0 bits (118), Expect(2) = 3e-082
Identities = 22/54 (40%), Positives = 33/54 (61%)
Frame = +2 / +1
Query: 2 YVIQPECTPVMSQTITYNTGGIPFQLNIQCVEGAPLWRETASIINHEFLKGYRQ 163
Y IQ EC+P S +I + + F + CV+G LWR ++S +N+E KGYR+
Sbjct: 571 YNIQHECSPNSSFSILIHQSPLAFPKEVNCVQGLNLWRNSSSDVNNELFKGYRK 732
Score = 41.8 bits (85), Expect(2) = 2e-022
Identities = 21/46 (45%), Positives = 28/46 (60%)
Frame = -1 / -1
Query: 786 TYMYPIPVAILPDKKKDATKNASAICKFIQTKKKTACMLYSFTLKK 649
TYMY I VAIL + K A+ I +F+ KK T+ +L S +LKK
Sbjct: 1361 TYMYAITVAILTSENIADAKKATDI*RFMHMKKNTSWIL*SLSLKK 1224
>gb|AY099665.1| Arabidopsis thaliana ABC-type transport protein-like protein
(At3g47790) mRNA, complete cds
Length = 2959
Score = 270 bits (584), Expect(2) = 6e-082
Identities = 113/205 (55%), Positives = 140/205 (68%)
Frame = +2 / +3
Query: 173 QINEFIAGYDFLGTTQYGLGVNVWYNSTYNDNNAYSFISTLRVPRLVNAVSNAYLKLIKG 352
+INEF +DF T L V+VWYNSTY ++ ++ +RVPRLVN SNAYL+ +KG
Sbjct: 747 KINEFAGAFDFQNTNGNNLNVSVWYNSTYKNDTVVRPMALIRVPRLVNLASNAYLEFLKG 926
Query: 353 TGVDMLLEFVKDMPKVGTXXXXXXXXXXXXXXXTWIIELLFPVMLTYLVYEKQQKLRIMM 532
+ +L E+VK+MPK T TW+I LLFPV+LT LVYEKQQ+LRIMM
Sbjct: 927 SETKILFEYVKEMPKPETKLSLDIASLIGPLFFTWVILLLFPVILTTLVYEKQQRLRIMM 1106
Query: 533 KMHGLKDGPYWLISYSYFLALSIVYMLFFMIFGSLIGLNFFRVNEYSIQAVFFFVCINLQ 712
KMHGL D PYW++SY+YFL +SI+YML F IFGSLIGLNFFR+N+YSIQ VFFF+CINLQ
Sbjct: 1107 KMHGLGDVPYWIVSYTYFLLISILYMLCFAIFGSLIGLNFFRLNDYSIQLVFFFICINLQ 1286
Query: 713 IXXXXXXXXXXXXGKMATGMGYMYV 787
I K AT + Y+YV
Sbjct: 1287 ISVAFLASAMFSDVKTATVIAYIYV 1361
Score = 57.0 bits (118), Expect(2) = 6e-082
Identities = 22/54 (40%), Positives = 33/54 (61%)
Frame = +2 / +3
Query: 2 YVIQPECTPVMSQTITYNTGGIPFQLNIQCVEGAPLWRETASIINHEFLKGYRQ 163
Y IQ EC+P S +I + + F + CV+G LWR ++S +N+E KGYR+
Sbjct: 570 YNIQHECSPNSSFSILIHQSPLAFPKEVNCVQGLNLWRNSSSDVNNELFKGYRK 731
>ref|NM_114646.3| Arabidopsis thaliana ATATH6; ATPase, coupled to transmembrane
movement of substances AT3G47780 (ATATH6) mRNA, complete
cds
Length = 2870
Score = 257 bits (555), Expect(2) = 1e-074
Identities = 107/206 (51%), Positives = 135/206 (65%)
Frame = +2 / +1
Query: 170 GQINEFIAGYDFLGTTQYGLGVNVWYNSTYNDNNAYSFISTLRVPRLVNAVSNAYLKLIK 349
G+INE A YD L T + V++WYNSTY D+ I +RVPR VN VSNAYL+ ++
Sbjct: 781 GKINEIAAAYDLLNTDRNNFNVHIWYNSTYKDDAGNRLIKLIRVPRSVNLVSNAYLQFLQ 960
Query: 350 GTGVDMLLEFVKDMPKVGTXXXXXXXXXXXXXXXTWIIELLFPVMLTYLVYEKQQKLRIM 529
G G ML E+VK+MPK T TW+I LLFPV+L+ LVYEKQQ LRI+
Sbjct: 961 GPGTRMLFEYVKEMPKPETSLRLDIASLIGPLFFTWVILLLFPVILSSLVYEKQQHLRII 1140
Query: 530 MKMHGLKDGPYWLISYSYFLALSIVYMLFFMIFGSLIGLNFFRVNEYSIQAVFFFVCINL 709
MKMHGL DGPYW+ISY+YFL +S++Y++ MIFGS IGL FFR+N YSIQ VF+F+ +NL
Sbjct: 1141 MKMHGLGDGPYWMISYAYFLTISVLYVICLMIFGSAIGLKFFRLNSYSIQFVFYFLYLNL 1320
Query: 710 QIXXXXXXXXXXXXGKMATGMGYMYV 787
QI K +T Y+YV
Sbjct: 1321 QIALAFLVSSVFSKVKTSTVASYIYV 1398
Score = 78.0 bits (164), Expect(2) = 2e-021
Identities = 48/111 (43%), Positives = 61/111 (54%)
Frame = -1 / -1
Query: 501 YTRYVNITGKRSSMIHVKNKTLRREDRSN*KLVPTLGISFTNSSSMSTPVPLINFR*ALD 322
YT ITG R + VK + R+ S +LV LGIS T S+++ P P N R*A D
Sbjct: 1112 YTNDDKITGNRRRITQVKKRGPIRDAMSRRRLVSGLGISLTYSNNILVPGPCRN*R*AFD 933
Query: 321 TAFTKRGTRNVEINEYALLSL*VELYQTFTPRPYCVVPKKS*PAINSFICP 169
T T+RGTR I+ + SL VELYQ T + + V K+S A SFI P
Sbjct: 932 TKLTERGTRINFISLFPASSLYVELYQMCTLKLFLSVFKRSYAAAISFIFP 780
Score = 46.9 bits (96), Expect(2) = 2e-021
Identities = 30/83 (36%), Positives = 37/83 (44%)
Frame = -1 / -1
Query: 789 NTYMYPIPVAILPDKKKDATKNASAICKFIQTKKKTACMLYSFTLKKLRXXXXXXXXXXX 610
NTYM V +L + + T+ A AIC+F K T ML + K
Sbjct: 1400 NTYM*EATVDVLTFENTEETRKARAICRFK*RK*NTNWML*ELSRKNFSPIADPNIIRHI 1221
Query: 609 XXXIDRARK*E*DISQ*GPSFRP 541
D RK* *+I Q*GPS RP
Sbjct: 1220 TYNTDMVRK*A*EIIQ*GPSPRP 1152
Score = 46.0 bits (94), Expect(2) = 1e-074
Identities = 16/54 (29%), Positives = 30/54 (55%)
Frame = +2 / +1
Query: 2 YVIQPECTPVMSQTITYNTGGIPFQLNIQCVEGAPLWRETASIINHEFLKGYRQ 163
Y IQP C + ++ + F+ ++CV+G+ LW T+ +N + KGY++
Sbjct: 607 YNIQPRCILNATFPFSFEQPPLKFEKELRCVQGSNLWTNTSKEVNDKIFKGYKK 768
>emb|AX651802.1| Sequence 657 from Patent WO03000898
Length = 2703
Score = 257 bits (555), Expect(2) = 1e-074
Identities = 107/206 (51%), Positives = 135/206 (65%)
Frame = +2 / +1
Query: 170 GQINEFIAGYDFLGTTQYGLGVNVWYNSTYNDNNAYSFISTLRVPRLVNAVSNAYLKLIK 349
G+INE A YD L T + V++WYNSTY D+ I +RVPR VN VSNAYL+ ++
Sbjct: 655 GKINEIAAAYDLLNTDRNNFNVHIWYNSTYKDDAGNRLIKLIRVPRSVNLVSNAYLQFLQ 834
Query: 350 GTGVDMLLEFVKDMPKVGTXXXXXXXXXXXXXXXTWIIELLFPVMLTYLVYEKQQKLRIM 529
G G ML E+VK+MPK T TW+I LLFPV+L+ LVYEKQQ LRI+
Sbjct: 835 GPGTRMLFEYVKEMPKPETSLRLDIASLIGPLFFTWVILLLFPVILSSLVYEKQQHLRII 1014
Query: 530 MKMHGLKDGPYWLISYSYFLALSIVYMLFFMIFGSLIGLNFFRVNEYSIQAVFFFVCINL 709
MKMHGL DGPYW+ISY+YFL +S++Y++ MIFGS IGL FFR+N YSIQ VF+F+ +NL
Sbjct: 1015 MKMHGLGDGPYWMISYAYFLTISVLYVICLMIFGSAIGLKFFRLNSYSIQFVFYFLYLNL 1194
Query: 710 QIXXXXXXXXXXXXGKMATGMGYMYV 787
QI K +T Y+YV
Sbjct: 1195 QIALAFLVSSVFSKVKTSTVASYIYV 1272
Score = 78.0 bits (164), Expect(2) = 2e-021
Identities = 48/111 (43%), Positives = 61/111 (54%)
Frame = -1 / -2
Query: 501 YTRYVNITGKRSSMIHVKNKTLRREDRSN*KLVPTLGISFTNSSSMSTPVPLINFR*ALD 322
YT ITG R + VK + R+ S +LV LGIS T S+++ P P N R*A D
Sbjct: 986 YTNDDKITGNRRRITQVKKRGPIRDAMSRRRLVSGLGISLTYSNNILVPGPCRN*R*AFD 807
Query: 321 TAFTKRGTRNVEINEYALLSL*VELYQTFTPRPYCVVPKKS*PAINSFICP 169
T T+RGTR I+ + SL VELYQ T + + V K+S A SFI P
Sbjct: 806 TKLTERGTRINFISLFPASSLYVELYQMCTLKLFLSVFKRSYAAAISFIFP 654
Score = 46.9 bits (96), Expect(2) = 2e-021
Identities = 30/83 (36%), Positives = 37/83 (44%)
Frame = -1 / -2
Query: 789 NTYMYPIPVAILPDKKKDATKNASAICKFIQTKKKTACMLYSFTLKKLRXXXXXXXXXXX 610
NTYM V +L + + T+ A AIC+F K T ML + K
Sbjct: 1274 NTYM*EATVDVLTFENTEETRKARAICRFK*RK*NTNWML*ELSRKNFSPIADPNIIRHI 1095
Query: 609 XXXIDRARK*E*DISQ*GPSFRP 541
D RK* *+I Q*GPS RP
Sbjct: 1094 TYNTDMVRK*A*EIIQ*GPSPRP 1026
Score = 46.0 bits (94), Expect(2) = 1e-074
Identities = 16/54 (29%), Positives = 30/54 (55%)
Frame = +2 / +1
Query: 2 YVIQPECTPVMSQTITYNTGGIPFQLNIQCVEGAPLWRETASIINHEFLKGYRQ 163
Y IQP C + ++ + F+ ++CV+G+ LW T+ +N + KGY++
Sbjct: 481 YNIQPRCILNATFPFSFEQPPLKFEKELRCVQGSNLWTNTSKEVNDKIFKGYKK 642
>ref|NM_114645.2| Arabidopsis thaliana ATATH5; ATPase, coupled to transmembrane
movement of substances AT3G47770 (ATATH5) mRNA, complete
cds
Length = 2703
Score = 234 bits (506), Expect(3) = 3e-066
Identities = 100/204 (49%), Positives = 130/204 (63%)
Frame = +2 / +1
Query: 176 INEFIAGYDFLGTTQYGLGVNVWYNSTYNDNNAYSFISTLRVPRLVNAVSNAYLKLIKGT 355
INE A YD L T + V +WY +TY + + +RVPR VN VSNAYL+ ++G
Sbjct: 679 INEVAAAYDLLNTDRNKFNVTIWYYTTYKGDLQDWRVKYVRVPRSVNMVSNAYLQFLRGP 858
Query: 356 GVDMLLEFVKDMPKVGTXXXXXXXXXXXXXXXTWIIELLFPVMLTYLVYEKQQKLRIMMK 535
G +L +FVK+MPK T TW+I LLFPV+LT LVYEKQQ+LRI+MK
Sbjct: 859 GTKILFDFVKEMPKQETRLRMDMASLIGPIFFTWVILLLFPVILTSLVYEKQQRLRIIMK 1038
Query: 536 MHGLKDGPYWLISYSYFLALSIVYMLFFMIFGSLIGLNFFRVNEYSIQAVFFFVCINLQI 715
MHGL D PYW+ISY+YFLA+S +Y++ MIFGS IGL FFR N+Y+IQ +F+F+ INLQI
Sbjct: 1039 MHGLGDAPYWMISYAYFLAISTLYIVCLMIFGSAIGLKFFRFNDYTIQFMFYFLYINLQI 1218
Query: 716 XXXXXXXXXXXXGKMATGMGYMYV 787
A+ + Y+YV
Sbjct: 1219 SIAFLVSSAFSKAVTASVVAYIYV 1290
Score = 35.4 bits (71), Expect(3) = 3e-066
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2 / +1
Query: 83 IQCVEGAPLWRETASIINHEFLKGYRQ 163
++CV+G LWR + +N E KG+R+
Sbjct: 580 VRCVQGLNLWRNNSLEVNDEIFKGFRK 660
Score = 23.5 bits (45), Expect(3) = 3e-066
Identities = 8/30 (26%), Positives = 16/30 (53%)
Frame = +2 / +1
Query: 8 IQPECTPVMSQTITYNTGGIPFQLNIQCVE 97
IQP+CTP ++++ + F + +E
Sbjct: 454 IQPQCTPATILSLSFRQPPLEFHKETKFLE 543
>ref|NM_114643.3| Arabidopsis thaliana ATATH3; ATPase, coupled to transmembrane
movement of substances AT3G47750 (ATATH3) mRNA, complete
cds
Length = 2835
Score = 114 bits (243), Expect(5) = 2e-065
Identities = 44/63 (69%), Positives = 54/63 (85%)
Frame = +2 / +1
Query: 452 TWIIELLFPVMLTYLVYEKQQKLRIMMKMHGLKDGPYWLISYSYFLALSIVYMLFFMIFG 631
TW+I LLFPV+L LVYEKQQ LRI+MKMHGL DGPYW+I+Y+YFLA+S +Y++ MIFG
Sbjct: 1039 TWVIVLLFPVILNSLVYEKQQHLRIIMKMHGLGDGPYWMITYAYFLAISTLYIICLMIFG 1218
Query: 632 SLI 640
S I
Sbjct: 1219 SAI 1227
Score = 58.8 bits (122), Expect(5) = 2e-065
Identities = 23/51 (45%), Positives = 31/51 (60%)
Frame = +2 / +1
Query: 635 LIGLNFFRVNEYSIQAVFFFVCINLQIXXXXXXXXXXXXGKMATGMGYMYV 787
L+GL FFR N+YSIQ +F+F+CINLQI + A+ Y+YV
Sbjct: 1252 LVGLKFFRFNDYSIQFIFYFLCINLQISIAFLVSSAFSKVETASVAAYLYV 1404
Score = 57.9 bits (120), Expect(5) = 2e-065
Identities = 22/38 (57%), Positives = 29/38 (76%)
Frame = +2 / +1
Query: 284 ISTLRVPRLVNAVSNAYLKLIKGTGVDMLLEFVKDMPK 397
+ +RVPR VN VSNAYL+ ++G G ML +FVK+MPK
Sbjct: 871 VKYVRVPRSVNMVSNAYLRFLRGPGTKMLFDFVKEMPK 984
Score = 56.1 bits (116), Expect(5) = 2e-065
Identities = 20/54 (37%), Positives = 31/54 (57%)
Frame = +2 / +1
Query: 2 YVIQPECTPVMSQTITYNTGGIPFQLNIQCVEGAPLWRETASIINHEFLKGYRQ 163
+ I+P CTP + + ++ I F ++CV+G LWR + +N E KGYRQ
Sbjct: 577 FQIRPYCTPTTNLSFSFRQPPITFHKEVRCVQGLNLWRNNSVEVNDEIFKGYRQ 738
Score = 40.5 bits (82), Expect(5) = 2e-065
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +2 / +1
Query: 176 INEFIAGYDFLGTTQYGLGVNVWYNSTYNDN 268
INE A YD L T + V +WYNS+Y N
Sbjct: 757 INEVAAAYDLLDTDRNKFNVTIWYNSSYKGN 849
>emb|AL049746.1|ATT23J7 Arabidopsis thaliana DNA chromosome 3, BAC clone T23J7
Length = 92493
Score = 106 bits (226), Expect(5) = 5e-063
Identities = 43/57 (75%), Positives = 50/57 (87%)
Frame = +2 / +3
Query: 479 VMLTYLVYEKQQKLRIMMKMHGLKDGPYWLISYSYFLALSIVYMLFFMIFGSLIGLN 649
V+LT LVYEKQQ+LRIMMKMHGL D PYW++SY+YFL +SI+YML F IFGSLIG N
Sbjct: 55353 VILTTLVYEKQQRLRIMMKMHGLGDVPYWIVSYTYFLLISILYMLCFAIFGSLIGNN 55523
Score = 105 bits (225), Expect(4) = 1e-047
Identities = 41/56 (73%), Positives = 50/56 (89%)
Frame = +2 / +2
Query: 479 VMLTYLVYEKQQKLRIMMKMHGLKDGPYWLISYSYFLALSIVYMLFFMIFGSLIGL 646
V+L LVYEKQQ+LRI+MKMHGL DGPYW+ISY+YFLALS Y++F MIFGS+IG+
Sbjct: 26618 VILNSLVYEKQQRLRIIMKMHGLGDGPYWIISYAYFLALSTFYIIFLMIFGSVIGI 26785
Score = 105 bits (224), Expect(4) = 1e-051
Identities = 42/55 (76%), Positives = 49/55 (89%)
Frame = +2 / +3
Query: 479 VMLTYLVYEKQQKLRIMMKMHGLKDGPYWLISYSYFLALSIVYMLFFMIFGSLIG 643
VMLT LVYEKQQ LRI+MKMHGL DGPYW+I+Y+YFLA+SIVY++ MIFGS IG
Sbjct: 38349 VMLTSLVYEKQQHLRIIMKMHGLGDGPYWMITYAYFLAISIVYIICLMIFGSAIG 38513
Score = 100 bits (213), Expect(3) = 1e-032
Identities = 40/64 (62%), Positives = 51/64 (79%)
Frame = +2 / +2
Query: 479 VMLTYLVYEKQQKLRIMMKMHGLKDGPYWLISYSYFLALSIVYMLFFMIFGSLIGLNFFR 658
V+L+ LVYEKQQ LRI+MKMHGL DGPYW+ISY+YFL +S++Y++ MIFGS IG
Sbjct: 50639 VILSSLVYEKQQHLRIIMKMHGLGDGPYWMISYAYFLTISVLYVICLMIFGSAIGN*SLS 50818
Query: 659 VNEY 670
VN +
Sbjct: 50819 VNTF 50830
Score = 99.6 bits (211), Expect(5) = 9e-044
Identities = 39/55 (70%), Positives = 48/55 (87%)
Frame = +2 / +3
Query: 479 VMLTYLVYEKQQKLRIMMKMHGLKDGPYWLISYSYFLALSIVYMLFFMIFGSLIG 643
V+LT LVYEKQQ+LRI+MKMHGL D PYW+ISY+YFLA+S +Y++ MIFGS IG
Sbjct: 44334 VILTSLVYEKQQRLRIIMKMHGLGDAPYWMISYAYFLAISTLYIVCLMIFGSAIG 44498
Score = 97.7 bits (207), Expect(5) = 3e-040
Identities = 38/55 (69%), Positives = 47/55 (85%)
Frame = +2 / +2
Query: 479 VMLTYLVYEKQQKLRIMMKMHGLKDGPYWLISYSYFLALSIVYMLFFMIFGSLIG 643
V+L LVYEKQQ LRI+MKMHGL DGPYW+I+Y+YFLA+S +Y++ MIFGS IG
Sbjct: 32507 VILNSLVYEKQQHLRIIMKMHGLGDGPYWMITYAYFLAISTLYIICLMIFGSAIG 32671
Score = 62.5 bits (130), Expect(5) = 5e-063
Identities = 25/43 (58%), Positives = 29/43 (67%)
Frame = +2 / +2
Query: 641 GLNFFRVNEYSIQAVFFFVCINLQIXXXXXXXXXXXXGKMATG 769
GLNFFR+N+YSIQ VFFF+CINLQI K+ATG
Sbjct: 55589 GLNFFRLNDYSIQLVFFFICINLQISVAFLASAMFSDVKIATG 55717
Score = 60.2 bits (125), Expect(4) = 1e-051
Identities = 26/56 (46%), Positives = 33/56 (58%)
Frame = +2 / +3
Query: 320 VSNAYLKLIKGTGVDMLLEFVKDMPKVGTXXXXXXXXXXXXXXXTWIIELLFPVML 487
VSNAYL+ ++G+G ML +FVK+MPK T TW+I LLFPV L
Sbjct: 38064 VSNAYLEFLQGSGTKMLFDFVKEMPKQETRLRLEMASLIGPIFFTWVILLLFPVSL 38231
Score = 56.5 bits (117), Expect(5) = 9e-044
Identities = 24/54 (44%), Positives = 31/54 (57%)
Frame = +2 / +2
Query: 320 VSNAYLKLIKGTGVDMLLEFVKDMPKVGTXXXXXXXXXXXXXXXTWIIELLFPV 481
VSNAYL+ ++G G +L +FVK+MPK T TW+I LLFPV
Sbjct: 43964 VSNAYLQFLRGPGTKILFDFVKEMPKQETRLRMDMASLIGPIFFTWVILLLFPV 44125
Score = 55.1 bits (114), Expect(5) = 5e-063
Identities = 24/55 (43%), Positives = 31/55 (56%)
Frame = +2 / +2
Query: 323 SNAYLKLIKGTGVDMLLEFVKDMPKVGTXXXXXXXXXXXXXXXTWIIELLFPVML 487
SNAYL+ +KG+ +L E+VK+MPK T TW+I LLFPV L
Sbjct: 55109 SNAYLEFLKGSETKILFEYVKEMPKPETKLSLDIASLIGPLFFTWVILLLFPVSL 55273
Score = 54.2 bits (112), Expect(5) = 3e-040
Identities = 21/45 (46%), Positives = 28/45 (62%)
Frame = +2 / +2
Query: 635 LIGLNFFRVNEYSIQAVFFFVCINLQIXXXXXXXXXXXXGKMATG 769
L+GL FFR N+YSIQ +F+F+CINLQI + A+G
Sbjct: 32741 LVGLKFFRFNDYSIQFIFYFLCINLQISIAFLVSSAFSKVETASG 32875
Score = 53.8 bits (111), Expect(4) = 1e-051
Identities = 21/45 (46%), Positives = 28/45 (62%)
Frame = +2 / +2
Query: 635 LIGLNFFRVNEYSIQAVFFFVCINLQIXXXXXXXXXXXXGKMATG 769
L+GL FFR N+YSIQ +F+F+CINLQI + A+G
Sbjct: 38585 LVGLKFFRFNDYSIQFIFYFLCINLQISIAFLVSSAFSKIETASG 38719
Score = 53.8 bits (111), Expect(4) = 1e-047
Identities = 25/56 (44%), Positives = 30/56 (53%)
Frame = +2 / +2
Query: 320 VSNAYLKLIKGTGVDMLLEFVKDMPKVGTXXXXXXXXXXXXXXXTWIIELLFPVML 487
VSNAYL+ ++G ML EFVK+MPK T TW+I LL PV L
Sbjct: 26366 VSNAYLQYLQGPRTKMLFEFVKEMPKPETKLRLDIASLIGPIFFTWVILLLLPVSL 26533
Score = 51.9 bits (107), Expect(3) = 1e-032
Identities = 20/42 (47%), Positives = 25/42 (59%)
Frame = +2 / +3
Query: 197 YDFLGTTQYGLGVNVWYNSTYNDNNAYSFISTLRVPRLVNAV 322
YD L T + V++WYNSTY D+ I +RVPR VN V
Sbjct: 50127 YDLLNTDRNNFNVHIWYNSTYKDDAGNRLIKLIRVPRSVNLV 50252
Score = 50.6 bits (104), Expect(5) = 5e-063
Identities = 20/42 (47%), Positives = 27/42 (64%)
Frame = +2 / +2
Query: 197 YDFLGTTQYGLGVNVWYNSTYNDNNAYSFISTLRVPRLVNAV 322
+DF T L V+VWYNSTY ++ ++ +RVPRLVN V
Sbjct: 54884 FDFQNTNGNNLNVSVWYNSTYKNDTVVRPMALIRVPRLVNLV 55009
Score = 48.3 bits (99), Expect(4) = 1e-047
Identities = 19/44 (43%), Positives = 23/44 (52%)
Frame = +2 / +3
Query: 197 YDFLGTTQYGLGVNVWYNSTYNDNNAYSFISTLRVPRLVNAVSN 328
YD T VN+W+N+TY D +RVPRLVN V N
Sbjct: 26133 YDLFDTNMTNFNVNIWFNATYKDEARNQPYKVVRVPRLVNWVRN 26264
Score = 47.3 bits (97), Expect(5) = 9e-044
Identities = 20/43 (46%), Positives = 25/43 (58%)
Frame = +2 / +1
Query: 641 GLNFFRVNEYSIQAVFFFVCINLQIXXXXXXXXXXXXGKMATG 769
GL FFR+N YSIQ VF+F+ +NLQI K +TG
Sbjct: 50890 GLKFFRLNSYSIQFVFYFLYLNLQIALAFLVSSVFSKVKTSTG 51018
Score = 44.1 bits (90), Expect(5) = 5e-063
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +2 / +1
Query: 71 FQLNIQCVEGAPLWRETASIINHEFLKGYRQ 163
F L + CV+G LWR ++S +N+E KGYR+
Sbjct: 54679 FCLEVNCVQGLNLWRNSSSDVNNELFKGYRK 54771
Score = 44.1 bits (90), Expect(5) = 3e-040
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = +2 / +1
Query: 320 VSNAYLKLIKGTGVDMLLEFVKDMPK 397
VSNAYL+ ++G G ML +FVK+MPK
Sbjct: 32239 VSNAYLRFLRGPGTKMLFDFVKEMPK 32316
Score = 43.2 bits (88), Expect(4) = 1e-051
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +2 / +1
Query: 197 YDFLGTTQYGLGVNVWYNSTYNDNNAYSFISTLRVPRLVNAVSN 328
YD + T V +WYNSTY + + +RVPR VN V N
Sbjct: 37849 YDLMDTDINNFNVTIWYNSTYKGDLRDRRVKYVRVPRSVNLVRN 37980
Score = 41.4 bits (84), Expect(5) = 9e-044
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +2 / +2
Query: 176 INEFIAGYDFLGTTQYGLGVNVWYNSTYNDNNAYSFISTLRVPRLVNAVSN 328
I+ ++ YD L T + V +WY +TY + + +RVPR VN V N
Sbjct: 43667 ISLVLSAYDLLNTDRNKFNVTIWYYTTYKGDLQDWRVKYVRVPRSVNMVRN 43819
Score = 40.9 bits (83), Expect(4) = 1e-047
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +2 / +1
Query: 635 LIGLNFFRVNEYSIQAVFFFVCINLQIXXXXXXXXXXXXGKMATG 769
L GL FF +N++S+Q F+FV INLQI + A+G
Sbjct: 26854 LSGLKFFLLNDFSLQFSFYFVYINLQISIAFLLSSAFSKVETASG 26988
Score = 39.6 bits (80), Expect(5) = 9e-044
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +2 / +3
Query: 83 IQCVEGAPLWRETASIINHEFLKGYRQ 163
++CVEG LWR + I++E KGYRQ
Sbjct: 37638 VRCVEGLNLWRNNSIEISNEIFKGYRQ 37718
Score = 39.1 bits (79), Expect(5) = 3e-040
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2 / +1
Query: 83 IQCVEGAPLWRETASIINHEFLKGYRQ 163
++CV+G LWR + +N E KGYRQ
Sbjct: 31831 VRCVQGLNLWRNNSVEVNDEIFKGYRQ 31911
Score = 36.8 bits (74), Expect(5) = 3e-040
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2 / +1
Query: 185 FIAGYDFLGTTQYGLGVNVWYNSTYNDN 268
FI YD L T + V +WYNS+Y N
Sbjct: 32017 FILAYDLLDTDRNKFNVTIWYNSSYKGN 32100
Score = 28.1 bits (55), Expect(3) = 1e-032
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +1 / +1
Query: 322 IQRLSEINQRDWGRHAT*VCKRYAQSWDKFSVGSVFSSECLILHMDHRTSFP 477
++ L I+ R + *+C+R A + +K S G S+ LH+ + +S P
Sbjct: 50368 VKCLPSISTRTGDKDVV*ICQRNA*TRNKSSSGHCVSNWPPFLHLGYSSSVP 50523
>ref|NM_114642.2| Arabidopsis thaliana ATATH2; ATPase, coupled to transmembrane
movement of substances AT3G47740 (ATATH2) mRNA, complete
cds
Length = 2844
Score = 191 bits (412), Expect(3) = 1e-062
Identities = 82/156 (52%), Positives = 103/156 (66%)
Frame = +2 / +1
Query: 320 VSNAYLKLIKGTGVDMLLEFVKDMPKVGTXXXXXXXXXXXXXXXTWIIELLFPVMLTYLV 499
VSNAYL+ ++G ML EFVK+MPK T TW+I LL PV+L LV
Sbjct: 955 VSNAYLQYLQGPRTKMLFEFVKEMPKPETKLRLDIASLIGPIFFTWVILLLLPVILNSLV 1134
Query: 500 YEKQQKLRIMMKMHGLKDGPYWLISYSYFLALSIVYMLFFMIFGSLIGLNFFRVNEYSIQ 679
YEKQQ+LRI+MKMHGL DGPYW+ISY+YFLALS Y++F MIFGS+IGL FF +N++S+Q
Sbjct: 1135 YEKQQRLRIIMKMHGLGDGPYWIISYAYFLALSTFYIIFLMIFGSVIGLKFFLLNDFSLQ 1314
Query: 680 AVFFFVCINLQIXXXXXXXXXXXXGKMATGMGYMYV 787
F+FV INLQI + A+ Y+YV
Sbjct: 1315 FSFYFVYINLQISIAFLLSSAFSKVETASVAAYLYV 1422
Score = 58.3 bits (121), Expect(3) = 1e-062
Identities = 22/49 (44%), Positives = 27/49 (55%)
Frame = +2 / +1
Query: 170 GQINEFIAGYDFLGTTQYGLGVNVWYNSTYNDNNAYSFISTLRVPRLVN 316
G INE +A YD T VN+W+N+TY D +RVPRLVN
Sbjct: 778 GMINEIVAAYDLFDTNMTNFNVNIWFNATYKDEARNQPYKVVRVPRLVN 924
Score = 31.8 bits (63), Expect(3) = 1e-062
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +2 / +1
Query: 80 NIQCVEGAPLWRETASIINHEFLKGYRQ 163
+++CV+G LWR + +N E +GY +
Sbjct: 682 DMRCVQGLNLWRNNSIEVNLELFEGYHK 765
>ref|NM_114644.2| Arabidopsis thaliana ATATH4; ATPase, coupled to transmembrane
movement of substances AT3G47760 (ATATH4) mRNA, complete
cds
Length = 2619
Score = 147 bits (315), Expect(3) = 2e-052
Identities = 65/126 (51%), Positives = 78/126 (61%)
Frame = +2 / +1
Query: 176 INEFIAGYDFLGTTQYGLGVNVWYNSTYNDNNAYSFISTLRVPRLVNAVSNAYLKLIKGT 355
INE A YD + T V +WYNSTY + + +RVPR VN VSNAYL+ ++G+
Sbjct: 667 INEVAAAYDLMDTDINNFNVTIWYNSTYKGDLRDRRVKYVRVPRSVNLVSNAYLEFLQGS 846
Query: 356 GVDMLLEFVKDMPKVGTXXXXXXXXXXXXXXXTWIIELLFPVMLTYLVYEKQQKLRIMMK 535
G ML +FVK+MPK T TW+I LLFPVMLT LVYEKQQ LRI+MK
Sbjct: 847 GTKMLFDFVKEMPKQETRLRLEMASLIGPIFFTWVILLLFPVMLTSLVYEKQQHLRIIMK 1026
Query: 536 MHGLKD 553
MHGL D
Sbjct: 1027 MHGLGD 1044
Score = 58.3 bits (121), Expect(3) = 2e-052
Identities = 23/51 (45%), Positives = 31/51 (60%)
Frame = +2 / +1
Query: 635 LIGLNFFRVNEYSIQAVFFFVCINLQIXXXXXXXXXXXXGKMATGMGYMYV 787
L+GL FFR N+YSIQ +F+F+CINLQI + A+ Y+YV
Sbjct: 1069 LVGLKFFRFNDYSIQFIFYFLCINLQISIAFLVSSAFSKIETASVAAYLYV 1221
Score = 41.8 bits (85), Expect(3) = 2e-052
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +2 / +1
Query: 65 IPFQLNIQCVEGAPLWRETASIINHEFLKGYRQ 163
+ F ++CVEG LWR + I++E KGYRQ
Sbjct: 550 LEFHKEVRCVEGLNLWRNNSIEISNEIFKGYRQ 648
>dbj|AB010069.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MAC9
Length = 57246
Score = 138 bits (296), Expect(4) = 5e-044
Identities = 54/103 (52%), Positives = 74/103 (71%)
Frame = +2 / +2
Query: 479 VMLTYLVYEKQQKLRIMMKMHGLKDGPYWLISYSYFLALSIVYMLFFMIFGSLIGLNFFR 658
V+LT LVYEKQ++LRI+MKMHGL GPYW+ISY+YFL LS+ Y++ +IFGS IGL +FR
Sbjct: 15572 VILTSLVYEKQERLRIIMKMHGLGIGPYWMISYAYFLTLSMFYVISLVIFGSAIGLRYFR 15751
Query: 659 VNEYSIQAVFFFVCINLQIXXXXXXXXXXXXGKMATGMGYMYV 787
+N+YS+Q +F+F+ +NLQI K ATG ++
Sbjct: 15752 LNDYSVQFIFYFIFVNLQISFAFLASSIFSKVKTATGTNITFL 15880
Score = 133 bits (285), Expect(3) = 2e-047
Identities = 54/98 (55%), Positives = 71/98 (72%)
Frame = +2 / +2
Query: 479 VMLTYLVYEKQQKLRIMMKMHGLKDGPYWLISYSYFLALSIVYMLFFMIFGSLIGLNFFR 658
V+LT LVYEKQ++LRI+MKMHGL DGPYW+ISY+YFL +S++Y++ + FGS IGL +FR
Sbjct: 932 VILTSLVYEKQERLRIIMKMHGLGDGPYWMISYAYFLTISMLYVISLVGFGSAIGLKYFR 1111
Query: 659 VNEYSIQAVFFFVCINLQIXXXXXXXXXXXXGKMATGM 772
N+YSIQ VF+F+ NLQI K TG+
Sbjct: 1112 RNDYSIQFVFYFIYSNLQISLAFLVSSIFSKVKTVTGI 1225
Score = 58.8 bits (122), Expect(4) = 5e-044
Identities = 26/61 (42%), Positives = 33/61 (54%)
Frame = +2 / +2
Query: 320 VSNAYLKLIKGTGVDMLLEFVKDMPKVGTXXXXXXXXXXXXXXXTWIIELLFPVMLTYLV 499
VSNAYLK +KG G +L EFVK++PK T TW++ LLFPV +
Sbjct: 15314 VSNAYLKFLKGPGTRILFEFVKEVPKHQTKFNLDIASMLGPLFFTWVVLLLFPVSYLTIS 15493
Query: 500 Y 502
Y
Sbjct: 15494 Y 15496
Score = 58.3 bits (121), Expect(3) = 2e-047
Identities = 25/58 (43%), Positives = 33/58 (56%)
Frame = +2 / +3
Query: 308 LVNAVSNAYLKLIKGTGVDMLLEFVKDMPKVGTXXXXXXXXXXXXXXXTWIIELLFPV 481
LV +SNAYLK +KG G +L EF+K++PK T TW++ LLFPV
Sbjct: 678 LVLQISNAYLKFLKGPGTRILFEFLKEVPKEETKMNQDIASLLGPLFFTWVVLLLFPV 851
Score = 38.6 bits (78), Expect(3) = 2e-047
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2 / +3
Query: 197 YDFLGTTQYGLGVNVWYNSTYNDNNA 274
YD + T + V +WYNSTYND A
Sbjct: 483 YDLMSTDRKNFNVTIWYNSTYNDEFA 560
Score = 30.9 bits (61), Expect(4) = 5e-044
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +2 / +2
Query: 197 YDFLGTTQYGLGVNVWYNSTYNDN 268
YD L T + V +WYNST D+
Sbjct: 15107 YDLLNTDRNNFDVTIWYNSTNIDD 15178
Score = 30.9 bits (61), Expect(4) = 5e-044
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2 / +1
Query: 83 IQCVEGAPLWRETASIINHEFLKG 154
++CV+G LWR + +N E KG
Sbjct: 274 VKCVQGLCLWRNNSVEVNDELFKG 345
>ref|NM_125564.1| Arabidopsis thaliana ATATH16; ATPase, coupled to transmembrane
movement of substances AT5G61700 (ATATH16) mRNA, complete
cds
Length = 2667
Score = 115 bits (245), Expect(4) = 4e-045
Identities = 47/91 (51%), Positives = 62/91 (68%)
Frame = +2 / +1
Query: 284 ISTLRVPRLVNAVSNAYLKLIKGTGVDMLLEFVKDMPKVGTXXXXXXXXXXXXXXXTWII 463
+ +RVPR +N +SNAYLK +KG G +L EF+K++PK T TW++
Sbjct: 829 LKLVRVPRSINLISNAYLKFLKGPGTRILFEFLKEVPKEETKMNQDIASLLGPLFFTWVV 1008
Query: 464 ELLFPVMLTYLVYEKQQKLRIMMKMHGLKDG 556
LLFPV+LT LVYEKQ++LRI+MKMHGL DG
Sbjct: 1009 LLLFPVILTSLVYEKQERLRIIMKMHGLGDG 1101
Score = 48.3 bits (99), Expect(4) = 4e-045
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +2 / +1
Query: 170 GQINEFIAGYDFLGTTQYGLGVNVWYNSTYNDNNA 274
G NE +A YD + T + V +WYNSTYND A
Sbjct: 712 GMPNEIVAAYDLMSTDRKNFNVTIWYNSTYNDEFA 816
Score = 45.1 bits (92), Expect(4) = 4e-045
Identities = 20/49 (40%), Positives = 26/49 (53%)
Frame = +2 / +1
Query: 641 GLNFFRVNEYSIQAVFFFVCINLQIXXXXXXXXXXXXGKMATGMGYMYV 787
GL +FR N+YSIQ VF+F+ NLQI K T + Y+ V
Sbjct: 1099 GLKYFRRNDYSIQFVFYFIYSNLQISLAFLVSSIFSKVKTVTVIAYILV 1245
Score = 31.8 bits (63), Expect(4) = 4e-045
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2 / +1
Query: 74 QLNIQCVEGAPLWRETASIINHEFLKG 154
Q ++CV+G LWR + +N E KG
Sbjct: 610 QTAVKCVQGLCLWRNNSVEVNDELFKG 690
>ref|NM_125568.1| Arabidopsis thaliana ATATH14; ATPase, coupled to transmembrane
movement of substances AT5G61740 (ATATH14) mRNA,
complete cds
Length = 2547
Score = 113 bits (241), Expect(3) = 2e-039
Identities = 48/85 (56%), Positives = 60/85 (70%)
Frame = +2 / +1
Query: 293 LRVPRLVNAVSNAYLKLIKGTGVDMLLEFVKDMPKVGTXXXXXXXXXXXXXXXTWIIELL 472
+RVPRL+N VSNAYLK +KG G +L EFVK++PK T TW++ LL
Sbjct: 727 VRVPRLLNLVSNAYLKFLKGPGTRILFEFVKEVPKHQTKFNLDIASMLGPLFFTWVVLLL 906
Query: 473 FPVMLTYLVYEKQQKLRIMMKMHGL 547
FPV+LT LVYEKQ++LRI+MKMHGL
Sbjct: 907 FPVILTSLVYEKQERLRIIMKMHGL 981
Score = 52.8 bits (109), Expect(3) = 2e-039
Identities = 21/53 (39%), Positives = 30/53 (56%)
Frame = +2 / +1
Query: 629 GSLIGLNFFRVNEYSIQAVFFFVCINLQIXXXXXXXXXXXXGKMATGMGYMYV 787
G IGL +FR+N+YS+Q +F+F+ +NLQI K AT + Y V
Sbjct: 982 GIAIGLRYFRLNDYSVQFIFYFIFVNLQISFAFLASSIFSKVKTATVVAYTLV 1140
Score = 37.3 bits (75), Expect(3) = 2e-039
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2 / +1
Query: 179 NEFIAGYDFLGTTQYGLGVNVWYNSTYNDN 268
NE A YD L T + V +WYNST D+
Sbjct: 619 NEIAAAYDLLNTDRNNFDVTIWYNSTNIDD 708
>gb|CW845394.1|CW845394 GT12111.Ds3.08.28.2003.jx22.578 Arabidopsis thaliana Landsberg Ds
insertion lines Arabidopsis thaliana genomic clone
GT12111, DNA sequence
Length = 578
Score = 119 bits (255), Expect(2) = 3e-037
Identities = 46/71 (64%), Positives = 61/71 (85%)
Frame = +2 / +2
Query: 479 VMLTYLVYEKQQKLRIMMKMHGLKDGPYWLISYSYFLALSIVYMLFFMIFGSLIGLNFFR 658
V+LT LVYEKQ++LRI+MKMHGL DGPYW+ISY+YFL +S++Y++ + FGS IGL +FR
Sbjct: 365 VILTSLVYEKQERLRIIMKMHGLGDGPYWMISYAYFLTISMLYVISLVGFGSAIGLKYFR 544
Query: 659 VNEYSIQAVFF 691
N+YSIQ VF+
Sbjct: 545 RNDYSIQFVFY 577
Score = 58.3 bits (121), Expect(2) = 3e-037
Identities = 25/58 (43%), Positives = 33/58 (56%)
Frame = +2 / +3
Query: 308 LVNAVSNAYLKLIKGTGVDMLLEFVKDMPKVGTXXXXXXXXXXXXXXXTWIIELLFPV 481
LV +SNAYLK +KG G +L EF+K++PK T TW++ LLFPV
Sbjct: 111 LVLQISNAYLKFLKGPGTRILFEFLKEVPKEETKMNQDIASLLGPLFFTWVVLLLFPV 284
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 138 bits (296), Expect = 2e-031
Identities = 54/103 (52%), Positives = 74/103 (71%)
Frame = +2 / +3
Query: 479 VMLTYLVYEKQQKLRIMMKMHGLKDGPYWLISYSYFLALSIVYMLFFMIFGSLIGLNFFR 658
V+LT LVYEKQ++LRI+MKMHGL GPYW+ISY+YFL LS+ Y++ +IFGS IGL +FR
Sbjct: 22015452 VILTSLVYEKQERLRIIMKMHGLGIGPYWMISYAYFLTLSMFYVISLVIFGSAIGLRYFR 22015631
Query: 659 VNEYSIQAVFFFVCINLQIXXXXXXXXXXXXGKMATGMGYMYV 787
+N+YS+Q +F+F+ +NLQI K ATG ++
Sbjct: 22015632 LNDYSVQFIFYFIFVNLQISFAFLASSIFSKVKTATGTNITFL 22015760
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 138 bits (296), Expect = 2e-031
Identities = 54/103 (52%), Positives = 74/103 (71%)
Frame = +2 / +1
Query: 479 VMLTYLVYEKQQKLRIMMKMHGLKDGPYWLISYSYFLALSIVYMLFFMIFGSLIGLNFFR 658
V+LT LVYEKQ++LRI+MKMHGL GPYW+ISY+YFL LS+ Y++ +IFGS IGL +FR
Sbjct: 24827365 VILTSLVYEKQERLRIIMKMHGLGIGPYWMISYAYFLTLSMFYVISLVIFGSAIGLRYFR 24827544
Query: 659 VNEYSIQAVFFFVCINLQIXXXXXXXXXXXXGKMATGMGYMYV 787
+N+YS+Q +F+F+ +NLQI K ATG ++
Sbjct: 24827545 LNDYSVQFIFYFIFVNLQISFAFLASSIFSKVKTATGTNITFL 24827673
Score = 133 bits (285), Expect = 7e-030
Identities = 54/98 (55%), Positives = 71/98 (72%)
Frame = +2 / +1
Query: 479 VMLTYLVYEKQQKLRIMMKMHGLKDGPYWLISYSYFLALSIVYMLFFMIFGSLIGLNFFR 658
V+LT LVYEKQ++LRI+MKMHGL DGPYW+ISY+YFL +S++Y++ + FGS IGL +FR
Sbjct: 24812725 VILTSLVYEKQERLRIIMKMHGLGDGPYWMISYAYFLTISMLYVISLVGFGSAIGLKYFR 24812904
Query: 659 VNEYSIQAVFFFVCINLQIXXXXXXXXXXXXGKMATGM 772
N+YSIQ VF+F+ NLQI K TG+
Sbjct: 24812905 RNDYSIQFVFYFIYSNLQISLAFLVSSIFSKVKTVTGI 24813018
>emb|AJ524255.1|ATH524255 Arabidopsis thaliana T-DNA flanking sequence, left border, clone
071H08
Length = 766
Score = 133 bits (285), Expect(2) = 7e-031
Identities = 54/98 (55%), Positives = 71/98 (72%)
Frame = +2 / -2
Query: 479 VMLTYLVYEKQQKLRIMMKMHGLKDGPYWLISYSYFLALSIVYMLFFMIFGSLIGLNFFR 658
V+LT LVYEKQ++LRI+MKMHGL DGPYW+ISY+YFL +S++Y++ + FGS IGL +FR
Sbjct: 597 VILTSLVYEKQERLRIIMKMHGLGDGPYWMISYAYFLTISMLYVISLVGFGSAIGLKYFR 418
Query: 659 VNEYSIQAVFFFVCINLQIXXXXXXXXXXXXGKMATGM 772
N+YSIQ VF+F+ NLQI K TG+
Sbjct: 417 RNDYSIQFVFYFIYSNLQISLAFLVSSIFSKVKTVTGI 304
Score = 23.1 bits (44), Expect(2) = 7e-031
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +2 / -3
Query: 452 TWIIELLFPV 481
TW++ LLFPV
Sbjct: 707 TWVVLLLFPV 678
>emb|CR383992.1| Arabidopsis thaliana transposon insertion STS GT_5.110549, sequence
tagged site
Length = 294
Score = 112 bits (239), Expect = 1e-023
Identities = 45/85 (52%), Positives = 59/85 (69%)
Frame = +2 / -3
Query: 518 LRIMMKMHGLKDGPYWLISYSYFLALSIVYMLFFMIFGSLIGLNFFRVNEYSIQAVFFFV 697
LRI+MKMHGL DGPYW+ISY+YFL +S++Y++ + FGS IGL +FR N+YSIQ VF+F+
Sbjct: 292 LRIIMKMHGLGDGPYWMISYAYFLTISMLYVISLVGFGSAIGLKYFRRNDYSIQFVFYFI 113
Query: 698 CINLQIXXXXXXXXXXXXGKMATGM 772
NLQI K TG+
Sbjct: 112 YSNLQISLAFLLSSIFSKVKTVTGI 38
>dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complete sequence
Length = 23403063
Score = 106 bits (226), Expect = 9e-022
Identities = 43/57 (75%), Positives = 50/57 (87%)
Frame = +2 / +1
Query: 479 VMLTYLVYEKQQKLRIMMKMHGLKDGPYWLISYSYFLALSIVYMLFFMIFGSLIGLN 649
V+LT LVYEKQQ+LRIMMKMHGL D PYW++SY+YFL +SI+YML F IFGSLIG N
Sbjct: 17595235 VILTTLVYEKQQRLRIMMKMHGLGDVPYWIVSYTYFLLISILYMLCFAIFGSLIGNN 17595405
Score = 105 bits (225), Expect = 1e-021
Identities = 41/56 (73%), Positives = 50/56 (89%)
Frame = +2 / +3
Query: 479 VMLTYLVYEKQQKLRIMMKMHGLKDGPYWLISYSYFLALSIVYMLFFMIFGSLIGL 646
V+L LVYEKQQ+LRI+MKMHGL DGPYW+ISY+YFLALS Y++F MIFGS+IG+
Sbjct: 17566500 VILNSLVYEKQQRLRIIMKMHGLGDGPYWIISYAYFLALSTFYIIFLMIFGSVIGI 17566667
Score = 105 bits (224), Expect = 2e-021
Identities = 42/55 (76%), Positives = 49/55 (89%)
Frame = +2 / +1
Query: 479 VMLTYLVYEKQQKLRIMMKMHGLKDGPYWLISYSYFLALSIVYMLFFMIFGSLIG 643
VMLT LVYEKQQ LRI+MKMHGL DGPYW+I+Y+YFLA+SIVY++ MIFGS IG
Sbjct: 17578231 VMLTSLVYEKQQHLRIIMKMHGLGDGPYWMITYAYFLAISIVYIICLMIFGSAIG 17578395
>ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complete sequence
Length = 23470805
Score = 106 bits (226), Expect = 9e-022
Identities = 43/57 (75%), Positives = 50/57 (87%)
Frame = +2 / +1
Query: 479 VMLTYLVYEKQQKLRIMMKMHGLKDGPYWLISYSYFLALSIVYMLFFMIFGSLIGLN 649
V+LT LVYEKQQ+LRIMMKMHGL D PYW++SY+YFL +SI+YML F IFGSLIG N
Sbjct: 17642173 VILTTLVYEKQQRLRIMMKMHGLGDVPYWIVSYTYFLLISILYMLCFAIFGSLIGNN 17642343
Score = 105 bits (225), Expect = 1e-021
Identities = 41/56 (73%), Positives = 50/56 (89%)
Frame = +2 / +3
Query: 479 VMLTYLVYEKQQKLRIMMKMHGLKDGPYWLISYSYFLALSIVYMLFFMIFGSLIGL 646
V+L LVYEKQQ+LRI+MKMHGL DGPYW+ISY+YFLALS Y++F MIFGS+IG+
Sbjct: 17613438 VILNSLVYEKQQRLRIIMKMHGLGDGPYWIISYAYFLALSTFYIIFLMIFGSVIGI 17613605
Score = 105 bits (224), Expect = 2e-021
Identities = 42/55 (76%), Positives = 49/55 (89%)
Frame = +2 / +1
Query: 479 VMLTYLVYEKQQKLRIMMKMHGLKDGPYWLISYSYFLALSIVYMLFFMIFGSLIG 643
VMLT LVYEKQQ LRI+MKMHGL DGPYW+I+Y+YFLA+SIVY++ MIFGS IG
Sbjct: 17625169 VMLTSLVYEKQQHLRIIMKMHGLGDGPYWMITYAYFLAISIVYIICLMIFGSAIG 17625333
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,725,141,059
Number of Sequences: 1013581
Number of extensions: 24841345
Number of successful extensions: 175817
Number of sequences better than 1.0e-020: 23
length of database: 302,980,290
effective HSP length: 56
effective length of database: 246,219,754
effective search space used: 50721269324
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)