TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBJ7h03.xg.2.1
(487 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BT022103.1| Arabidopsis thaliana At3g61230 mRNA, complet... 177 2e-043
ref|NM_115987.2| Arabidopsis thaliana zinc ion binding AT3G... 177 2e-043
gb|AU238898.1|AU238898 AU238898 RAFL19 Arabidopsis thaliana... 177 3e-043
gb|BT005586.1| Arabidopsis thaliana clone U50754 putative L... 177 3e-043
dbj|AK118044.1| Arabidopsis thaliana At2g45800 mRNA for put... 177 3e-043
ref|NM_130143.2| Arabidopsis thaliana zinc ion binding AT2G... 177 3e-043
emb|BX825681.1|CNS0A6AT Arabidopsis thaliana Full-length cD... 173 3e-042
emb|BX821642.1|CNS0A9BE Arabidopsis thaliana Full-length cD... 169 4e-041
gb|AY059790.1| Arabidopsis thaliana At1g01770 mRNA sequence 117 5e-040
ref|NM_100061.2| Arabidopsis thaliana zinc ion binding AT1G... 117 5e-040
ref|NM_001035793.1| Arabidopsis thaliana zinc ion binding A... 120 6e-040
ref|NM_001035791.1| Arabidopsis thaliana zinc ion binding A... 120 6e-040
ref|NM_001035792.1| Arabidopsis thaliana zinc ion binding A... 120 6e-040
ref|NM_115435.3| Arabidopsis thaliana zinc ion binding AT3G... 120 6e-040
gb|AY084361.1| Arabidopsis thaliana clone 105441 mRNA, comp... 120 6e-040
gb|AY063924.1| Arabidopsis thaliana putative transcription ... 120 6e-040
ref|NM_148878.2| Arabidopsis thaliana zinc ion binding AT3G... 120 6e-040
emb|BX822878.1|CNS0A5VL Arabidopsis thaliana Full-length cD... 120 6e-040
emb|BX824310.1|CNS0A5HL Arabidopsis thaliana Full-length cD... 120 6e-040
emb|X91398.1|ATRNAATL2 A.thaliana mRNA for transcription fa... 120 6e-040
emb|CS137644.1| Sequence 615 from Patent WO2005047516 120 6e-040
gb|BU636113.1|BU636113 045F10 Infected Arabidopsis Leaf Ara... 120 7e-040
gb|BE038353.1|BE038353 AA12D10 AA Arabidopsis thaliana cDNA... 120 7e-040
gb|BP561356.1|BP561356 BP561356 RAFL6 Arabidopsis thaliana ... 120 7e-040
gb|AF370574.1|AF370574 Arabidopsis thaliana transcription f... 119 1e-039
gb|AY091249.1| Arabidopsis thaliana putative transcription ... 119 1e-039
emb|BX817923.1|CNS0AE65 Arabidopsis thaliana Full-length cD... 115 2e-039
gb|AV552065.1|AV552065 AV552065 Arabidopsis thaliana roots ... 120 4e-039
gb|AV553161.1|AV553161 AV553161 Arabidopsis thaliana roots ... 120 2e-037
gb|CB254686.1|CB254686 62-E018429-019-008-L15-T7R MPIZ-ADIS... 120 5e-037
gb|AV554564.1|AV554564 AV554564 Arabidopsis thaliana roots ... 120 9e-037
gb|AY094448.1| Arabidopsis thaliana At2g39900/T28M21.6 mRNA... 109 6e-036
ref|NM_129548.2| Arabidopsis thaliana zinc ion binding AT2G... 109 6e-036
emb|CS137532.1| Sequence 503 from Patent WO2005047516 109 6e-036
emb|BX842049.1|CNS09Y98 Arabidopsis thaliana Full-length cD... 109 6e-036
emb|BX842053.1|CNS09Y9O Arabidopsis thaliana Full-length cD... 109 6e-036
emb|AX412775.1| Sequence 539 from Patent WO0222675 109 6e-036
gb|AY122901.1| Arabidopsis thaliana At2g39900/T28M21.6 mRNA... 109 6e-036
gb|CF652626.1|CF652626 67-L020164-066-001-E18-SP6P MPIZ-ADI... 117 4e-035
gb|BE038914.1|BE038914 AB05H02 AB Arabidopsis thaliana cDNA... 109 7e-035
gb|CB264898.1|CB264898 24-E014661-035-002-P06-T7R MPIZ-ADIS... 120 2e-033
gb|BP562171.1|BP562171 BP562171 RAFL9 Arabidopsis thaliana ... 120 3e-033
gb|CK119661.1|CK119661 211c15.p1 AtM1 Arabidopsis thaliana ... 120 3e-033
gb|AV554173.1|AV554173 AV554173 Arabidopsis thaliana roots ... 118 3e-033
emb|BX822901.1|CNS0A5ZC Arabidopsis thaliana Full-length cD... 68 1e-030
ref|NM_100894.2| Arabidopsis thaliana transcription factor/... 94 3e-027
gb|AY085377.1| Arabidopsis thaliana clone 148790 mRNA, comp... 94 3e-027
gb|CB263957.1|CB263957 02-E011587-008-014-D07-pBl2 MPIZ-ADI... 94 3e-027
gb|CB263958.1|CB263958 02-E011587-008-014-D07-rev MPIZ-ADIS... 94 3e-027
gb|CB263312.1|CB263312 26-E8880-008-014-D07-pBl2 MPIZ-ADIS-... 94 3e-027
gb|CB254062.1|CB254062 81-E010933-019-003-B21-T7R MPIZ-ADIS... 94 3e-027
gb|AF370569.1|AF370569 Arabidopsis thaliana similar to tran... 92 8e-027
emb|AX412728.1| Sequence 492 from Patent WO0222675 92 8e-027
ref|NM_001036468.1| Arabidopsis thaliana zinc ion binding A... 120 3e-026
gb|T23011.1|T23011 5019 Lambda-PRL2 Arabidopsis thaliana cD... 120 3e-026
gb|CB257341.1|CB257341 32-E011583-027-006-P08-T7R MPIZ-ADIS... 120 3e-026
gb|CB254107.1|CB254107 79-E010698-019-002-N19-T7R MPIZ-ADIS... 120 3e-026
gb|AC009273.2|T1N6 Sequence of BAC T1N6 from Arabidopsis th... 64 2e-025
gb|AV536967.1|AV536967 AV536967 Arabidopsis thaliana liquid... 94 3e-025
emb|BX817691.1|CNS0AE7D Arabidopsis thaliana Full-length cD... 69 4e-024
gb|BP851492.1|BP851492 BP851492 RAFL21 Arabidopsis thaliana... 111 1e-023
gb|AV824278.1|AV824278 AV824278 RAFL6 Arabidopsis thaliana ... 106 7e-023
gb|AY072143.1| Arabidopsis thaliana At1g10200 mRNA sequence 94 1e-022
gb|AV831505.1|AV831505 AV831505 RAFL9 Arabidopsis thaliana ... 94 1e-022
emb|AL161667.1|ATF1I16 Arabidopsis thaliana DNA chromosome ... 61 1e-022
gb|AC004665.3| Arabidopsis thaliana chromosome 2 clone F4I1... 69 4e-022
gb|BX841501.1|BX841501 BX841501 Arabidopsis thaliana Flower... 91 5e-022
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 64 4e-021
gb|AF002109.3| Arabidopsis thaliana chromosome 2 clone T28M... 57 6e-021
gb|CF652509.1|CF652509 60-L020164-066-001-G16-SP6P MPIZ-ADI... 95 8e-021
emb|AL137898.1|ATT20K12 Arabidopsis thaliana DNA chromosome... 68 9e-021
>gb|BT022103.1| Arabidopsis thaliana At3g61230 mRNA, complete cds
Length = 710
Score = 177 bits (381), Expect = 2e-043
Identities = 71/138 (51%), Positives = 87/138 (63%)
Frame = +2 / +1
Query: 65 MSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCK 244
M++FTGT C CDK +DL+ YHK+CF HC G L +YSSM LYCK
Sbjct: 52 MAAFTGTTDKCKACDKTVYVMDLMTLEGMPYHKSCFRCSHCNGTLVICNYSSMDGVLYCK 231
Query: 245 THFEQLFKETGSFSKNFTPXXKSSDKXXLTRAPSKLSSXFSGTXXXXXACQKTVYPLEXL 424
THFEQLFKE+G+FSKNF K+ T+AP++LSS FSGT AC+KTVYPLE +
Sbjct: 232 THFEQLFKESGNFSKNFQTAGKTEKSNDATKAPNRLSSFFSGTQDKCAACKKTVYPLEKM 411
Query: 425 TLEXXSYHKXXXXXSHGG 478
T+E SYHK +H G
Sbjct: 412 TMEGESYHKTCFRCAHSG 465
Score = 89.5 bits (189), Expect(2) = 7e-023
Identities = 42/73 (57%), Positives = 47/73 (64%)
Frame = -2 / -1
Query: 294 KFLEKLPVSLKSCSKWVLQYXXXSMEE*LXIERIPLQWXXXKHVLW*VXXSXXRRSMXXX 115
KFL K P SLKSCSKWVLQY SM+E*L I R+PLQW KH L * S +S+
Sbjct: 281 KFLLKFPDSLKSCSKWVLQYKTPSMDE*LHITRVPLQWLHLKHDL**GIPSKVIKSITYT 102
Query: 114 XLSHSAHXSXVPV 76
LSH+ H S VPV
Sbjct: 101 VLSHALHLSVVPV 63
Score = 39.1 bits (79), Expect(2) = 7e-023
Identities = 21/42 (50%), Positives = 22/42 (52%)
Frame = -2 / -1
Query: 477 PPCEXLXXLLW*DXXSRVNXSSGYTVFWQAXXLX*VPEXXDD 352
P C L +LW*D S V S G TVF QA L VP DD
Sbjct: 464 PLCAHLKQVLW*DSPSIVIFSRG*TVFLQAAHLSCVPLKKDD 339
>ref|NM_115987.2| Arabidopsis thaliana zinc ion binding AT3G61230 mRNA, complete cds
Length = 1351
Score = 177 bits (381), Expect = 2e-043
Identities = 71/138 (51%), Positives = 87/138 (63%)
Frame = +2 / +2
Query: 65 MSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCK 244
M++FTGT C CDK +DL+ YHK+CF HC G L +YSSM LYCK
Sbjct: 95 MAAFTGTTDKCKACDKTVYVMDLMTLEGMPYHKSCFRCSHCNGTLVICNYSSMDGVLYCK 274
Query: 245 THFEQLFKETGSFSKNFTPXXKSSDKXXLTRAPSKLSSXFSGTXXXXXACQKTVYPLEXL 424
THFEQLFKE+G+FSKNF K+ T+AP++LSS FSGT AC+KTVYPLE +
Sbjct: 275 THFEQLFKESGNFSKNFQTAGKTEKSNDATKAPNRLSSFFSGTQDKCAACKKTVYPLEKM 454
Query: 425 TLEXXSYHKXXXXXSHGG 478
T+E SYHK +H G
Sbjct: 455 TMEGESYHKTCFRCAHSG 508
Score = 89.5 bits (189), Expect(2) = 7e-023
Identities = 42/73 (57%), Positives = 47/73 (64%)
Frame = -2 / -2
Query: 294 KFLEKLPVSLKSCSKWVLQYXXXSMEE*LXIERIPLQWXXXKHVLW*VXXSXXRRSMXXX 115
KFL K P SLKSCSKWVLQY SM+E*L I R+PLQW KH L * S +S+
Sbjct: 324 KFLLKFPDSLKSCSKWVLQYKTPSMDE*LHITRVPLQWLHLKHDL**GIPSKVIKSITYT 145
Query: 114 XLSHSAHXSXVPV 76
LSH+ H S VPV
Sbjct: 144 VLSHALHLSVVPV 106
Score = 39.1 bits (79), Expect(2) = 7e-023
Identities = 21/42 (50%), Positives = 22/42 (52%)
Frame = -2 / -2
Query: 477 PPCEXLXXLLW*DXXSRVNXSSGYTVFWQAXXLX*VPEXXDD 352
P C L +LW*D S V S G TVF QA L VP DD
Sbjct: 507 PLCAHLKQVLW*DSPSIVIFSRG*TVFLQAAHLSCVPLKKDD 382
>gb|AU238898.1|AU238898 AU238898 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-27-K11 5',
mRNA sequence
Length = 642
Score = 177 bits (380), Expect = 3e-043
Identities = 73/136 (53%), Positives = 83/136 (61%)
Frame = +2 / +1
Query: 71 SFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCKTH 250
SFTGT C CDK +DLL TYHK+CF HCKG L +YSSM LYCK H
Sbjct: 115 SFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKPH 294
Query: 251 FEQLFKETGSFSKNFTPXXKSSDKXXLTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTL 430
FEQLFKE+G++SKNF LTR PSKLSS FSGT C+KTVYPLE +T+
Sbjct: 295 FEQLFKESGNYSKNFQAGKTEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPLEKVTM 474
Query: 431 EXXSYHKXXXXXSHGG 478
E SYHK +H G
Sbjct: 475 EGESYHKTCFRCTHSG 522
>gb|BT005586.1| Arabidopsis thaliana clone U50754 putative LIM-domain protein
(At2g45800) mRNA, complete cds
Length = 712
Score = 177 bits (380), Expect = 3e-043
Identities = 73/136 (53%), Positives = 83/136 (61%)
Frame = +2 / +1
Query: 71 SFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCKTH 250
SFTGT C CDK +DLL TYHK+CF HCKG L +YSSM LYCK H
Sbjct: 4 SFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKPH 183
Query: 251 FEQLFKETGSFSKNFTPXXKSSDKXXLTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTL 430
FEQLFKE+G++SKNF LTR PSKLSS FSGT C+KTVYPLE +T+
Sbjct: 184 FEQLFKESGNYSKNFQAGKTEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPLEKVTM 363
Query: 431 EXXSYHKXXXXXSHGG 478
E SYHK +H G
Sbjct: 364 EGESYHKTCFRCTHSG 411
>dbj|AK118044.1| Arabidopsis thaliana At2g45800 mRNA for putative LIM-domain
protein, complete cds, clone: RAFL19-27-K11
Length = 991
Score = 177 bits (380), Expect = 3e-043
Identities = 73/136 (53%), Positives = 83/136 (61%)
Frame = +2 / +1
Query: 71 SFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCKTH 250
SFTGT C CDK +DLL TYHK+CF HCKG L +YSSM LYCK H
Sbjct: 115 SFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKPH 294
Query: 251 FEQLFKETGSFSKNFTPXXKSSDKXXLTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTL 430
FEQLFKE+G++SKNF LTR PSKLSS FSGT C+KTVYPLE +T+
Sbjct: 295 FEQLFKESGNYSKNFQAGKTEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPLEKVTM 474
Query: 431 EXXSYHKXXXXXSHGG 478
E SYHK +H G
Sbjct: 475 EGESYHKTCFRCTHSG 522
>ref|NM_130143.2| Arabidopsis thaliana zinc ion binding AT2G45800 transcript variant
AT2G45800.1 mRNA, complete cds
Length = 1224
Score = 177 bits (380), Expect = 3e-043
Identities = 73/136 (53%), Positives = 83/136 (61%)
Frame = +2 / +1
Query: 71 SFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCKTH 250
SFTGT C CDK +DLL TYHK+CF HCKG L +YSSM LYCK H
Sbjct: 115 SFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKPH 294
Query: 251 FEQLFKETGSFSKNFTPXXKSSDKXXLTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTL 430
FEQLFKE+G++SKNF LTR PSKLSS FSGT C+KTVYPLE +T+
Sbjct: 295 FEQLFKESGNYSKNFQAGKTEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPLEKVTM 474
Query: 431 EXXSYHKXXXXXSHGG 478
E SYHK +H G
Sbjct: 475 EGESYHKTCFRCTHSG 522
>emb|BX825681.1|CNS0A6AT Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL56ZA06 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 912
Score = 173 bits (372), Expect = 3e-042
Identities = 70/138 (50%), Positives = 86/138 (62%)
Frame = +2 / +2
Query: 65 MSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCK 244
M++FTGT C C K +DL+ YHK+CF HC G L +YSSM LYCK
Sbjct: 95 MAAFTGTTDKCKACYKTVYVMDLMTLEGMPYHKSCFRCSHCNGTLVICNYSSMDGVLYCK 274
Query: 245 THFEQLFKETGSFSKNFTPXXKSSDKXXLTRAPSKLSSXFSGTXXXXXACQKTVYPLEXL 424
THFEQLFKE+G+FSKNF K+ T+AP++LSS FSGT AC+KTVYPLE +
Sbjct: 275 THFEQLFKESGNFSKNFQTAGKTEKSNDATKAPNRLSSFFSGTQDKCAACKKTVYPLEKM 454
Query: 425 TLEXXSYHKXXXXXSHGG 478
T+E SYHK +H G
Sbjct: 455 TMEGESYHKTCFRCAHSG 508
Score = 85.8 bits (181), Expect(2) = 9e-022
Identities = 41/73 (56%), Positives = 46/73 (63%)
Frame = -2 / -1
Query: 294 KFLEKLPVSLKSCSKWVLQYXXXSMEE*LXIERIPLQWXXXKHVLW*VXXSXXRRSMXXX 115
KFL K P SLKSCSKWVLQY SM+E*L I R+PLQW KH L * S +S+
Sbjct: 324 KFLLKFPDSLKSCSKWVLQYKTPSMDE*LHITRVPLQWLHLKHDL**GIPSKVIKSITYT 145
Query: 114 XLSHSAHXSXVPV 76
L H+ H S VPV
Sbjct: 144 VL*HALHLSVVPV 106
Score = 39.1 bits (79), Expect(2) = 9e-022
Identities = 21/42 (50%), Positives = 22/42 (52%)
Frame = -2 / -1
Query: 477 PPCEXLXXLLW*DXXSRVNXSSGYTVFWQAXXLX*VPEXXDD 352
P C L +LW*D S V S G TVF QA L VP DD
Sbjct: 507 PLCAHLKQVLW*DSPSIVIFSRG*TVFLQAAHLSCVPLKKDD 382
>emb|BX821642.1|CNS0A9BE Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL60ZD04 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 944
Score = 169 bits (364), Expect = 4e-041
Identities = 70/138 (50%), Positives = 82/138 (59%)
Frame = +2 / +1
Query: 65 MSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCK 244
+ SFTGT C CDK +DLL TYHK+CF HCKG L +YSSM LYCK
Sbjct: 52 LMSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCK 231
Query: 245 THFEQLFKETGSFSKNFTPXXKSSDKXXLTRAPSKLSSXFSGTXXXXXACQKTVYPLEXL 424
HFEQLFKE+G++SKN LTR PSKLS+ FSGT C+KTVYPLE +
Sbjct: 232 PHFEQLFKESGNYSKNNQAGKTEKPNDHLTRTPSKLSTFFSGTQNKCATCKKTVYPLEKV 411
Query: 425 TLEXXSYHKXXXXXSHGG 478
T+E YHK +H G
Sbjct: 412 TMEGERYHKTCFRCTHNG 465
>gb|AY059790.1| Arabidopsis thaliana At1g01770 mRNA sequence
Length = 3229
Score = 117 bits (250), Expect(2) = 5e-040
Identities = 45/77 (58%), Positives = 51/77 (66%)
Frame = +2 / +2
Query: 71 SFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCKTH 250
SFTGT C CDK +D+L YHK+CF HCKG L +YSSM LYCKTH
Sbjct: 2456 SFTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKTH 2635
Query: 251 FEQLFKETGSFSKNFTP 301
FEQLFKE+G+FSKNF P
Sbjct: 2636 FEQLFKESGNFSKNFQP 2686
Score = 68.9 bits (144), Expect(2) = 5e-040
Identities = 28/58 (48%), Positives = 36/58 (62%)
Frame = +2 / +2
Query: 314 SDKXXLTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGGXXL 487
++K LTR PSK+SS F GT AC+KTVYPLE + +E +HK +HGG L
Sbjct: 2693 TEKPELTRTPSKISSIFCGTQDKCAACEKTVYPLEKIQMEGECFHKTCFRCAHGGCTL 2866
>ref|NM_100061.2| Arabidopsis thaliana zinc ion binding AT1G01780 mRNA, complete cds
Length = 765
Score = 117 bits (250), Expect(2) = 5e-040
Identities = 45/77 (58%), Positives = 51/77 (66%)
Frame = +2 / +1
Query: 71 SFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCKTH 250
SFTGT C CDK +D+L YHK+CF HCKG L +YSSM LYCKTH
Sbjct: 151 SFTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKTH 330
Query: 251 FEQLFKETGSFSKNFTP 301
FEQLFKE+G+FSKNF P
Sbjct: 331 FEQLFKESGNFSKNFQP 381
Score = 68.9 bits (144), Expect(2) = 5e-040
Identities = 28/58 (48%), Positives = 36/58 (62%)
Frame = +2 / +1
Query: 314 SDKXXLTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGGXXL 487
++K LTR PSK+SS F GT AC+KTVYPLE + +E +HK +HGG L
Sbjct: 388 TEKPELTRTPSKISSIFCGTQDKCAACEKTVYPLEKIQMEGECFHKTCFRCAHGGCTL 561
>ref|NM_001035793.1| Arabidopsis thaliana zinc ion binding AT3G55770 transcript variant
AT3G55770.5 mRNA, complete cds
Length = 1046
Score = 120 bits (256), Expect(2) = 6e-040
Identities = 48/93 (51%), Positives = 56/93 (60%)
Frame = +2 / +2
Query: 44 RQAGVGTMSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSM 223
+ G SFTGTQ C C+K ++LL YHK+CF HCK L SYSSM
Sbjct: 218 KSEGKALRMSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSM 397
Query: 224 XXXLYCKTHFEQLFKETGSFSKNFTPXXKSSDK 322
LYCK HFEQLFKE+GSF+KNF KS+DK
Sbjct: 398 EGVLYCKPHFEQLFKESGSFNKNFQSPAKSADK 496
Score = 65.7 bits (137), Expect(2) = 6e-040
Identities = 25/50 (50%), Positives = 32/50 (64%)
Frame = +2 / +2
Query: 329 LTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGG 478
LTR PS+++ FSGT C KTVYP+E +T+E +YHK SHGG
Sbjct: 509 LTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVESQTYHKSCFKCSHGG 658
>ref|NM_001035791.1| Arabidopsis thaliana zinc ion binding AT3G55770 transcript variant
AT3G55770.3 mRNA, complete cds
Length = 1042
Score = 120 bits (256), Expect(2) = 6e-040
Identities = 48/93 (51%), Positives = 56/93 (60%)
Frame = +2 / +1
Query: 44 RQAGVGTMSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSM 223
+ G SFTGTQ C C+K ++LL YHK+CF HCK L SYSSM
Sbjct: 214 KSEGKALRMSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSM 393
Query: 224 XXXLYCKTHFEQLFKETGSFSKNFTPXXKSSDK 322
LYCK HFEQLFKE+GSF+KNF KS+DK
Sbjct: 394 EGVLYCKPHFEQLFKESGSFNKNFQSPAKSADK 492
Score = 65.7 bits (137), Expect(2) = 6e-040
Identities = 25/50 (50%), Positives = 32/50 (64%)
Frame = +2 / +1
Query: 329 LTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGG 478
LTR PS+++ FSGT C KTVYP+E +T+E +YHK SHGG
Sbjct: 505 LTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVESQTYHKSCFKCSHGG 654
>ref|NM_001035792.1| Arabidopsis thaliana zinc ion binding AT3G55770 transcript variant
AT3G55770.4 mRNA, complete cds
Length = 1030
Score = 120 bits (256), Expect(2) = 6e-040
Identities = 48/93 (51%), Positives = 56/93 (60%)
Frame = +2 / +1
Query: 44 RQAGVGTMSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSM 223
+ G SFTGTQ C C+K ++LL YHK+CF HCK L SYSSM
Sbjct: 202 KSEGKALRMSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSM 381
Query: 224 XXXLYCKTHFEQLFKETGSFSKNFTPXXKSSDK 322
LYCK HFEQLFKE+GSF+KNF KS+DK
Sbjct: 382 EGVLYCKPHFEQLFKESGSFNKNFQSPAKSADK 480
Score = 65.7 bits (137), Expect(2) = 6e-040
Identities = 25/50 (50%), Positives = 32/50 (64%)
Frame = +2 / +1
Query: 329 LTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGG 478
LTR PS+++ FSGT C KTVYP+E +T+E +YHK SHGG
Sbjct: 493 LTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVESQTYHKSCFKCSHGG 642
>ref|NM_115435.3| Arabidopsis thaliana zinc ion binding AT3G55770 transcript variant
AT3G55770.1 mRNA, complete cds
Length = 1010
Score = 120 bits (256), Expect(2) = 6e-040
Identities = 48/93 (51%), Positives = 56/93 (60%)
Frame = +2 / +3
Query: 44 RQAGVGTMSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSM 223
+ G SFTGTQ C C+K ++LL YHK+CF HCK L SYSSM
Sbjct: 183 KSEGKALRMSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSM 362
Query: 224 XXXLYCKTHFEQLFKETGSFSKNFTPXXKSSDK 322
LYCK HFEQLFKE+GSF+KNF KS+DK
Sbjct: 363 EGVLYCKPHFEQLFKESGSFNKNFQSPAKSADK 461
Score = 65.7 bits (137), Expect(2) = 6e-040
Identities = 25/50 (50%), Positives = 32/50 (64%)
Frame = +2 / +3
Query: 329 LTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGG 478
LTR PS+++ FSGT C KTVYP+E +T+E +YHK SHGG
Sbjct: 474 LTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVESQTYHKSCFKCSHGG 623
>gb|AY084361.1| Arabidopsis thaliana clone 105441 mRNA, complete sequence
Length = 991
Score = 120 bits (256), Expect(2) = 6e-040
Identities = 48/93 (51%), Positives = 56/93 (60%)
Frame = +2 / +3
Query: 44 RQAGVGTMSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSM 223
+ G SFTGTQ C C+K ++LL YHK+CF HCK L SYSSM
Sbjct: 183 KSEGKALRMSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSM 362
Query: 224 XXXLYCKTHFEQLFKETGSFSKNFTPXXKSSDK 322
LYCK HFEQLFKE+GSF+KNF KS+DK
Sbjct: 363 EGVLYCKPHFEQLFKESGSFNKNFQSPAKSADK 461
Score = 65.7 bits (137), Expect(2) = 6e-040
Identities = 25/50 (50%), Positives = 32/50 (64%)
Frame = +2 / +3
Query: 329 LTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGG 478
LTR PS+++ FSGT C KTVYP+E +T+E +YHK SHGG
Sbjct: 474 LTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVESQTYHKSCFKCSHGG 623
>gb|AY063924.1| Arabidopsis thaliana putative transcription factor L2 (At3g55770)
mRNA, complete cds
Length = 977
Score = 120 bits (256), Expect(2) = 6e-040
Identities = 48/93 (51%), Positives = 56/93 (60%)
Frame = +2 / +3
Query: 44 RQAGVGTMSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSM 223
+ G SFTGTQ C C+K ++LL YHK+CF HCK L SYSSM
Sbjct: 153 KSEGKALRMSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSM 332
Query: 224 XXXLYCKTHFEQLFKETGSFSKNFTPXXKSSDK 322
LYCK HFEQLFKE+GSF+KNF KS+DK
Sbjct: 333 EGVLYCKPHFEQLFKESGSFNKNFQSPAKSADK 431
Score = 65.7 bits (137), Expect(2) = 6e-040
Identities = 25/50 (50%), Positives = 32/50 (64%)
Frame = +2 / +3
Query: 329 LTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGG 478
LTR PS+++ FSGT C KTVYP+E +T+E +YHK SHGG
Sbjct: 444 LTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVESQTYHKSCFKCSHGG 593
>ref|NM_148878.2| Arabidopsis thaliana zinc ion binding AT3G55770 transcript variant
AT3G55770.2 mRNA, complete cds
Length = 943
Score = 120 bits (256), Expect(2) = 6e-040
Identities = 48/93 (51%), Positives = 56/93 (60%)
Frame = +2 / +1
Query: 44 RQAGVGTMSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSM 223
+ G SFTGTQ C C+K ++LL YHK+CF HCK L SYSSM
Sbjct: 115 KSEGKALRMSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSM 294
Query: 224 XXXLYCKTHFEQLFKETGSFSKNFTPXXKSSDK 322
LYCK HFEQLFKE+GSF+KNF KS+DK
Sbjct: 295 EGVLYCKPHFEQLFKESGSFNKNFQSPAKSADK 393
Score = 65.7 bits (137), Expect(2) = 6e-040
Identities = 25/50 (50%), Positives = 32/50 (64%)
Frame = +2 / +1
Query: 329 LTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGG 478
LTR PS+++ FSGT C KTVYP+E +T+E +YHK SHGG
Sbjct: 406 LTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVESQTYHKSCFKCSHGG 555
>emb|BX822878.1|CNS0A5VL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB6ZE02 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 935
Score = 120 bits (256), Expect(2) = 6e-040
Identities = 48/93 (51%), Positives = 56/93 (60%)
Frame = +2 / +1
Query: 44 RQAGVGTMSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSM 223
+ G SFTGTQ C C+K ++LL YHK+CF HCK L SYSSM
Sbjct: 142 KSEGKALRMSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSM 321
Query: 224 XXXLYCKTHFEQLFKETGSFSKNFTPXXKSSDK 322
LYCK HFEQLFKE+GSF+KNF KS+DK
Sbjct: 322 EGVLYCKPHFEQLFKESGSFNKNFQSPAKSADK 420
Score = 65.7 bits (137), Expect(2) = 6e-040
Identities = 25/50 (50%), Positives = 32/50 (64%)
Frame = +2 / +1
Query: 329 LTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGG 478
LTR PS+++ FSGT C KTVYP+E +T+E +YHK SHGG
Sbjct: 433 LTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVESQTYHKSCFKCSHGG 582
>emb|BX824310.1|CNS0A5HL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH38ZH03 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 883
Score = 120 bits (256), Expect(2) = 6e-040
Identities = 48/93 (51%), Positives = 56/93 (60%)
Frame = +2 / +1
Query: 44 RQAGVGTMSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSM 223
+ G SFTGTQ C C+K ++LL YHK+CF HCK L SYSSM
Sbjct: 145 KSEGKALRMSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSM 324
Query: 224 XXXLYCKTHFEQLFKETGSFSKNFTPXXKSSDK 322
LYCK HFEQLFKE+GSF+KNF KS+DK
Sbjct: 325 EGVLYCKPHFEQLFKESGSFNKNFQSPAKSADK 423
Score = 65.7 bits (137), Expect(2) = 6e-040
Identities = 25/50 (50%), Positives = 32/50 (64%)
Frame = +2 / +1
Query: 329 LTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGG 478
LTR PS+++ FSGT C KTVYP+E +T+E +YHK SHGG
Sbjct: 436 LTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVESQTYHKSCFKCSHGG 585
>emb|X91398.1|ATRNAATL2 A.thaliana mRNA for transcription factor L2
Length = 882
Score = 120 bits (256), Expect(2) = 6e-040
Identities = 48/93 (51%), Positives = 56/93 (60%)
Frame = +2 / +1
Query: 44 RQAGVGTMSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSM 223
+ G SFTGTQ C C+K ++LL YHK+CF HCK L SYSSM
Sbjct: 52 KSEGKALRMSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSM 231
Query: 224 XXXLYCKTHFEQLFKETGSFSKNFTPXXKSSDK 322
LYCK HFEQLFKE+GSF+KNF KS+DK
Sbjct: 232 EGVLYCKPHFEQLFKESGSFNKNFQSPAKSADK 330
Score = 65.7 bits (137), Expect(2) = 6e-040
Identities = 25/50 (50%), Positives = 32/50 (64%)
Frame = +2 / +1
Query: 329 LTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGG 478
LTR PS+++ FSGT C KTVYP+E +T+E +YHK SHGG
Sbjct: 343 LTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVESQTYHKSCFKCSHGG 492
>emb|CS137644.1| Sequence 615 from Patent WO2005047516
Length = 861
Score = 120 bits (256), Expect(2) = 6e-040
Identities = 48/93 (51%), Positives = 56/93 (60%)
Frame = +2 / +1
Query: 44 RQAGVGTMSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSM 223
+ G SFTGTQ C C+K ++LL YHK+CF HCK L SYSSM
Sbjct: 52 KSEGKALRMSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSM 231
Query: 224 XXXLYCKTHFEQLFKETGSFSKNFTPXXKSSDK 322
LYCK HFEQLFKE+GSF+KNF KS+DK
Sbjct: 232 EGVLYCKPHFEQLFKESGSFNKNFQSPAKSADK 330
Score = 65.7 bits (137), Expect(2) = 6e-040
Identities = 25/50 (50%), Positives = 32/50 (64%)
Frame = +2 / +1
Query: 329 LTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGG 478
LTR PS+++ FSGT C KTVYP+E +T+E +YHK SHGG
Sbjct: 343 LTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVESQTYHKSCFKCSHGG 492
>gb|BU636113.1|BU636113 045F10 Infected Arabidopsis Leaf Arabidopsis thaliana cDNA, mRNA
sequence
Length = 750
Score = 120 bits (256), Expect(2) = 7e-040
Identities = 48/93 (51%), Positives = 56/93 (60%)
Frame = +2 / +3
Query: 44 RQAGVGTMSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSM 223
+ G SFTGTQ C C+K ++LL YHK+CF HCK L SYSSM
Sbjct: 102 KSEGKALRMSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSM 281
Query: 224 XXXLYCKTHFEQLFKETGSFSKNFTPXXKSSDK 322
LYCK HFEQLFKE+GSF+KNF KS+DK
Sbjct: 282 EGVLYCKPHFEQLFKESGSFNKNFQSPAKSADK 380
Score = 65.7 bits (137), Expect(2) = 7e-040
Identities = 25/50 (50%), Positives = 32/50 (64%)
Frame = +2 / +3
Query: 329 LTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGG 478
LTR PS+++ FSGT C KTVYP+E +T+E +YHK SHGG
Sbjct: 393 LTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVESQTYHKSCFKCSHGG 542
>gb|BE038353.1|BE038353 AA12D10 AA Arabidopsis thaliana cDNA 5' similar to transcription
factor l2, mRNA sequence
Length = 709
Score = 120 bits (256), Expect(2) = 7e-040
Identities = 48/93 (51%), Positives = 56/93 (60%)
Frame = +2 / +2
Query: 44 RQAGVGTMSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSM 223
+ G SFTGTQ C C+K ++LL YHK+CF HCK L SYSSM
Sbjct: 164 KSEGKALRMSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSM 343
Query: 224 XXXLYCKTHFEQLFKETGSFSKNFTPXXKSSDK 322
LYCK HFEQLFKE+GSF+KNF KS+DK
Sbjct: 344 EGVLYCKPHFEQLFKESGSFNKNFQSPAKSADK 442
Score = 65.7 bits (137), Expect(2) = 7e-040
Identities = 25/50 (50%), Positives = 32/50 (64%)
Frame = +2 / +2
Query: 329 LTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGG 478
LTR PS+++ FSGT C KTVYP+E +T+E +YHK SHGG
Sbjct: 455 LTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVESQTYHKSCFKCSHGG 604
>gb|BP561356.1|BP561356 BP561356 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-83-K09 5',
mRNA sequence
Length = 659
Score = 120 bits (256), Expect(2) = 7e-040
Identities = 48/93 (51%), Positives = 56/93 (60%)
Frame = +2 / +2
Query: 44 RQAGVGTMSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSM 223
+ G SFTGTQ C C+K ++LL YHK+CF HCK L SYSSM
Sbjct: 155 KSEGKALRMSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSM 334
Query: 224 XXXLYCKTHFEQLFKETGSFSKNFTPXXKSSDK 322
LYCK HFEQLFKE+GSF+KNF KS+DK
Sbjct: 335 EGVLYCKPHFEQLFKESGSFNKNFQSPAKSADK 433
Score = 65.7 bits (137), Expect(2) = 7e-040
Identities = 25/50 (50%), Positives = 32/50 (64%)
Frame = +2 / +2
Query: 329 LTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGG 478
LTR PS+++ FSGT C KTVYP+E +T+E +YHK SHGG
Sbjct: 446 LTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVESQTYHKSCFKCSHGG 595
>gb|AF370574.1|AF370574 Arabidopsis thaliana transcription factor L2 (F1I16_180) mRNA,
complete cds
Length = 694
Score = 119 bits (254), Expect(2) = 1e-039
Identities = 47/84 (55%), Positives = 54/84 (64%)
Frame = +2 / +3
Query: 71 SFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCKTH 250
SFTGTQ C C+K ++LL YHK+CF HCK L SYSSM LYCK H
Sbjct: 3 SFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKPH 182
Query: 251 FEQLFKETGSFSKNFTPXXKSSDK 322
FEQLFKE+GSF+KNF KS+DK
Sbjct: 183 FEQLFKESGSFNKNFQSPAKSADK 254
Score = 65.7 bits (137), Expect(2) = 1e-039
Identities = 25/50 (50%), Positives = 32/50 (64%)
Frame = +2 / +3
Query: 329 LTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGG 478
LTR PS+++ FSGT C KTVYP+E +T+E +YHK SHGG
Sbjct: 267 LTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVESQTYHKSCFKCSHGG 416
>gb|AY091249.1| Arabidopsis thaliana putative transcription factor L2 (At3g55770)
mRNA, complete cds
Length = 631
Score = 119 bits (254), Expect(2) = 1e-039
Identities = 47/84 (55%), Positives = 54/84 (64%)
Frame = +2 / +1
Query: 71 SFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCKTH 250
SFTGTQ C C+K ++LL YHK+CF HCK L SYSSM LYCK H
Sbjct: 4 SFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKPH 183
Query: 251 FEQLFKETGSFSKNFTPXXKSSDK 322
FEQLFKE+GSF+KNF KS+DK
Sbjct: 184 FEQLFKESGSFNKNFQSPAKSADK 255
Score = 65.7 bits (137), Expect(2) = 1e-039
Identities = 25/50 (50%), Positives = 32/50 (64%)
Frame = +2 / +1
Query: 329 LTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGG 478
LTR PS+++ FSGT C KTVYP+E +T+E +YHK SHGG
Sbjct: 268 LTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVESQTYHKSCFKCSHGG 417
>emb|BX817923.1|CNS0AE65 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL50ZE05 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 931
Score = 115 bits (245), Expect(2) = 2e-039
Identities = 44/77 (57%), Positives = 50/77 (64%)
Frame = +2 / +2
Query: 71 SFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCKTH 250
SFTGT C CDK +D+L YHK+CF HCKG L +YSSM LYC TH
Sbjct: 152 SFTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCNTH 331
Query: 251 FEQLFKETGSFSKNFTP 301
FEQLFKE+G+FSKNF P
Sbjct: 332 FEQLFKESGNFSKNFQP 382
Score = 68.9 bits (144), Expect(2) = 2e-039
Identities = 28/58 (48%), Positives = 36/58 (62%)
Frame = +2 / +2
Query: 314 SDKXXLTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGGXXL 487
++K LTR PSK+SS F GT AC+KTVYPLE + +E +HK +HGG L
Sbjct: 389 TEKPELTRTPSKISSIFCGTQDKCAACEKTVYPLEKIQMEGECFHKTCFRCAHGGCTL 562
>gb|AV552065.1|AV552065 AV552065 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ20a03R 5', mRNA sequence
Length = 571
Score = 120 bits (256), Expect(2) = 4e-039
Identities = 48/93 (51%), Positives = 56/93 (60%)
Frame = +2 / +2
Query: 44 RQAGVGTMSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSM 223
+ G SFTGTQ C C+K ++LL YHK+CF HCK L SYSSM
Sbjct: 134 KSEGKALRMSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSM 313
Query: 224 XXXLYCKTHFEQLFKETGSFSKNFTPXXKSSDK 322
LYCK HFEQLFKE+GSF+KNF KS+DK
Sbjct: 314 EGVLYCKPHFEQLFKESGSFNKNFQSPAKSADK 412
Score = 62.9 bits (131), Expect(2) = 4e-039
Identities = 24/49 (48%), Positives = 31/49 (63%)
Frame = +2 / +2
Query: 329 LTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHG 475
LTR PS+++ FSGT C KTVYP+E +T+E +YHK SHG
Sbjct: 425 LTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVESQTYHKSCFKCSHG 571
>gb|AV553161.1|AV553161 AV553161 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ55d10R 5', mRNA sequence
Length = 568
Score = 120 bits (256), Expect(2) = 2e-037
Identities = 48/93 (51%), Positives = 56/93 (60%)
Frame = +2 / +3
Query: 44 RQAGVGTMSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSM 223
+ G SFTGTQ C C+K ++LL YHK+CF HCK L SYSSM
Sbjct: 153 KSEGKALRMSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSM 332
Query: 224 XXXLYCKTHFEQLFKETGSFSKNFTPXXKSSDK 322
LYCK HFEQLFKE+GSF+KNF KS+DK
Sbjct: 333 EGVLYCKPHFEQLFKESGSFNKNFQSPAKSADK 431
Score = 57.4 bits (119), Expect(2) = 2e-037
Identities = 21/41 (51%), Positives = 28/41 (68%)
Frame = +2 / +3
Query: 329 LTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHK 451
LTR PS+++ FSGT C KTVYP+E +T+E +YHK
Sbjct: 444 LTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVESQTYHK 566
>gb|CB254686.1|CB254686 62-E018429-019-008-L15-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768L158Q 5-PRIME, mRNA sequence
Length = 558
Score = 120 bits (256), Expect(2) = 5e-037
Identities = 48/93 (51%), Positives = 56/93 (60%)
Frame = +2 / +1
Query: 44 RQAGVGTMSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSM 223
+ G SFTGTQ C C+K ++LL YHK+CF HCK L SYSSM
Sbjct: 85 KSEGKALRMSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSM 264
Query: 224 XXXLYCKTHFEQLFKETGSFSKNFTPXXKSSDK 322
LYCK HFEQLFKE+GSF+KNF KS+DK
Sbjct: 265 EGVLYCKPHFEQLFKESGSFNKNFQSPAKSADK 363
Score = 56.1 bits (116), Expect(2) = 5e-037
Identities = 22/50 (44%), Positives = 29/50 (58%)
Frame = +2 / +1
Query: 329 LTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGG 478
LTR PS+++ FSGT C TVYP+ +T+E +YHK SH G
Sbjct: 376 LTRTPSRVAGRFSGTQEKCATCSXTVYPIAKVTVESQTYHKSCFKCSHVG 525
>gb|AV554564.1|AV554564 AV554564 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ95b04R 5', mRNA sequence
Length = 525
Score = 120 bits (256), Expect(2) = 9e-037
Identities = 48/93 (51%), Positives = 56/93 (60%)
Frame = +2 / +3
Query: 44 RQAGVGTMSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSM 223
+ G SFTGTQ C C+K ++LL YHK+CF HCK L SYSSM
Sbjct: 114 KSEGKALRMSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSM 293
Query: 224 XXXLYCKTHFEQLFKETGSFSKNFTPXXKSSDK 322
LYCK HFEQLFKE+GSF+KNF KS+DK
Sbjct: 294 EGVLYCKPHFEQLFKESGSFNKNFQSPAKSADK 392
Score = 55.1 bits (114), Expect(2) = 9e-037
Identities = 20/40 (50%), Positives = 27/40 (67%)
Frame = +2 / +3
Query: 329 LTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYH 448
LTR PS+++ FSGT C KTVYP+E +T+E +YH
Sbjct: 405 LTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVESQTYH 524
>gb|AY094448.1| Arabidopsis thaliana At2g39900/T28M21.6 mRNA, complete cds
Length = 948
Score = 109 bits (232), Expect(2) = 6e-036
Identities = 42/80 (52%), Positives = 50/80 (62%)
Frame = +2 / +2
Query: 71 SFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCKTH 250
SFTGTQ C C+K ++LL +YHK CF HCK L +YSSM +YC+ H
Sbjct: 179 SFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRPH 358
Query: 251 FEQLFKETGSFSKNFTPXXK 310
FEQLFKE+GSFSKNF K
Sbjct: 359 FEQLFKESGSFSKNFQSPAK 418
Score = 63.4 bits (132), Expect(2) = 6e-036
Identities = 25/50 (50%), Positives = 30/50 (60%)
Frame = +2 / +2
Query: 329 LTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGG 478
L R PS+L+ FSGT C KTVYP+E +T+E YHK SHGG
Sbjct: 446 LNRTPSRLAGMFSGTQDKCATCTKTVYPIEKVTVESQCYHKSCFKCSHGG 595
>ref|NM_129548.2| Arabidopsis thaliana zinc ion binding AT2G39900 mRNA, complete cds
Length = 948
Score = 109 bits (232), Expect(2) = 6e-036
Identities = 42/80 (52%), Positives = 50/80 (62%)
Frame = +2 / +2
Query: 71 SFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCKTH 250
SFTGTQ C C+K ++LL +YHK CF HCK L +YSSM +YC+ H
Sbjct: 179 SFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRPH 358
Query: 251 FEQLFKETGSFSKNFTPXXK 310
FEQLFKE+GSFSKNF K
Sbjct: 359 FEQLFKESGSFSKNFQSPAK 418
Score = 63.4 bits (132), Expect(2) = 6e-036
Identities = 25/50 (50%), Positives = 30/50 (60%)
Frame = +2 / +2
Query: 329 LTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGG 478
L R PS+L+ FSGT C KTVYP+E +T+E YHK SHGG
Sbjct: 446 LNRTPSRLAGMFSGTQDKCATCTKTVYPIEKVTVESQCYHKSCFKCSHGG 595
>emb|CS137532.1| Sequence 503 from Patent WO2005047516
Length = 928
Score = 109 bits (232), Expect(2) = 6e-036
Identities = 42/80 (52%), Positives = 50/80 (62%)
Frame = +2 / +1
Query: 71 SFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCKTH 250
SFTGTQ C C+K ++LL +YHK CF HCK L +YSSM +YC+ H
Sbjct: 196 SFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRPH 375
Query: 251 FEQLFKETGSFSKNFTPXXK 310
FEQLFKE+GSFSKNF K
Sbjct: 376 FEQLFKESGSFSKNFQSPAK 435
Score = 63.4 bits (132), Expect(2) = 6e-036
Identities = 25/50 (50%), Positives = 30/50 (60%)
Frame = +2 / +1
Query: 329 LTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGG 478
L R PS+L+ FSGT C KTVYP+E +T+E YHK SHGG
Sbjct: 463 LNRTPSRLAGMFSGTQDKCATCTKTVYPIEKVTVESQCYHKSCFKCSHGG 612
>emb|BX842049.1|CNS09Y98 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL12ZB11 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 904
Score = 109 bits (232), Expect(2) = 6e-036
Identities = 42/80 (52%), Positives = 50/80 (62%)
Frame = +2 / +1
Query: 71 SFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCKTH 250
SFTGTQ C C+K ++LL +YHK CF HCK L +YSSM +YC+ H
Sbjct: 133 SFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRPH 312
Query: 251 FEQLFKETGSFSKNFTPXXK 310
FEQLFKE+GSFSKNF K
Sbjct: 313 FEQLFKESGSFSKNFQSPAK 372
Score = 63.4 bits (132), Expect(2) = 6e-036
Identities = 25/50 (50%), Positives = 30/50 (60%)
Frame = +2 / +1
Query: 329 LTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGG 478
L R PS+L+ FSGT C KTVYP+E +T+E YHK SHGG
Sbjct: 400 LNRTPSRLAGMFSGTQDKCATCTKTVYPIEKVTVESQCYHKSCFKCSHGG 549
>emb|BX842053.1|CNS09Y9O Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL12ZH07 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 892
Score = 109 bits (232), Expect(2) = 6e-036
Identities = 42/80 (52%), Positives = 50/80 (62%)
Frame = +2 / +1
Query: 71 SFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCKTH 250
SFTGTQ C C+K ++LL +YHK CF HCK L +YSSM +YC+ H
Sbjct: 133 SFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRPH 312
Query: 251 FEQLFKETGSFSKNFTPXXK 310
FEQLFKE+GSFSKNF K
Sbjct: 313 FEQLFKESGSFSKNFQSPAK 372
Score = 63.4 bits (132), Expect(2) = 6e-036
Identities = 25/50 (50%), Positives = 30/50 (60%)
Frame = +2 / +1
Query: 329 LTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGG 478
L R PS+L+ FSGT C KTVYP+E +T+E YHK SHGG
Sbjct: 400 LNRTPSRLAGMFSGTQDKCATCTKTVYPIEKVTVESQCYHKSCFKCSHGG 549
>emb|AX412775.1| Sequence 539 from Patent WO0222675
Length = 603
Score = 109 bits (232), Expect(2) = 6e-036
Identities = 42/80 (52%), Positives = 50/80 (62%)
Frame = +2 / +1
Query: 71 SFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCKTH 250
SFTGTQ C C+K ++LL +YHK CF HCK L +YSSM +YC+ H
Sbjct: 4 SFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRPH 183
Query: 251 FEQLFKETGSFSKNFTPXXK 310
FEQLFKE+GSFSKNF K
Sbjct: 184 FEQLFKESGSFSKNFQSPAK 243
Score = 63.4 bits (132), Expect(2) = 6e-036
Identities = 25/50 (50%), Positives = 30/50 (60%)
Frame = +2 / +1
Query: 329 LTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGG 478
L R PS+L+ FSGT C KTVYP+E +T+E YHK SHGG
Sbjct: 271 LNRTPSRLAGMFSGTQDKCATCTKTVYPIEKVTVESQCYHKSCFKCSHGG 420
>gb|AY122901.1| Arabidopsis thaliana At2g39900/T28M21.6 mRNA, complete cds
Length = 603
Score = 109 bits (232), Expect(2) = 6e-036
Identities = 42/80 (52%), Positives = 50/80 (62%)
Frame = +2 / +1
Query: 71 SFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCKTH 250
SFTGTQ C C+K ++LL +YHK CF HCK L +YSSM +YC+ H
Sbjct: 4 SFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRPH 183
Query: 251 FEQLFKETGSFSKNFTPXXK 310
FEQLFKE+GSFSKNF K
Sbjct: 184 FEQLFKESGSFSKNFQSPAK 243
Score = 63.4 bits (132), Expect(2) = 6e-036
Identities = 25/50 (50%), Positives = 30/50 (60%)
Frame = +2 / +1
Query: 329 LTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGG 478
L R PS+L+ FSGT C KTVYP+E +T+E YHK SHGG
Sbjct: 271 LNRTPSRLAGMFSGTQDKCATCTKTVYPIEKVTVESQCYHKSCFKCSHGG 420
>gb|CF652626.1|CF652626 67-L020164-066-001-E18-SP6P MPIZ-ADIS-066 Arabidopsis thaliana cDNA
clone MPIZp2001E181Q 5-PRIME, mRNA sequence
Length = 382
Score = 117 bits (250), Expect(2) = 4e-035
Identities = 46/84 (54%), Positives = 54/84 (64%)
Frame = +2 / +1
Query: 71 SFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCKTH 250
SFTGTQ C C+K ++LL YHK+CF HCK L SYSSM LYCK H
Sbjct: 1 SFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKPH 180
Query: 251 FEQLFKETGSFSKNFTPXXKSSDK 322
FEQLFKE+GSF+KNF KS+D+
Sbjct: 181 FEQLFKESGSFNKNFQSPAKSADE 252
Score = 51.5 bits (106), Expect(2) = 4e-035
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = +2 / +1
Query: 329 LTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSY 445
LTR PS+++ FSGT C KTVYP+E +T+E +Y
Sbjct: 265 LTRTPSRVAGRFSGTQEKCATCSKTVYPIEQVTVESQTY 381
>gb|BE038914.1|BE038914 AB05H02 AB Arabidopsis thaliana cDNA 5' similar to lim-domain
protein, mRNA sequence
Length = 716
Score = 109 bits (232), Expect(2) = 7e-035
Identities = 42/80 (52%), Positives = 50/80 (62%)
Frame = +2 / +1
Query: 71 SFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCKTH 250
SFTGTQ C C+K ++LL +YHK CF HCK L +YSSM +YC+ H
Sbjct: 97 SFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRPH 276
Query: 251 FEQLFKETGSFSKNFTPXXK 310
FEQLFKE+GSFSKNF K
Sbjct: 277 FEQLFKESGSFSKNFQSPAK 336
Score = 59.7 bits (124), Expect(2) = 7e-035
Identities = 24/50 (48%), Positives = 29/50 (58%)
Frame = +2 / +1
Query: 329 LTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGG 478
L R PS+L+ FSGT C KTVY +E +T+E YHK SHGG
Sbjct: 364 LNRTPSRLAGMFSGTQDKCATCTKTVYAIEKVTVESQCYHKSCFKCSHGG 513
>gb|CB264898.1|CB264898 24-E014661-035-002-P06-T7R MPIZ-ADIS-035 Arabidopsis thaliana cDNA
clone MPIZp2000P062Q 5-PRIME, mRNA sequence
Length = 525
Score = 120 bits (256), Expect(2) = 2e-033
Identities = 48/93 (51%), Positives = 56/93 (60%)
Frame = +2 / +1
Query: 44 RQAGVGTMSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSM 223
+ G SFTGTQ C C+K ++LL YHK+CF HCK L SYSSM
Sbjct: 145 KSEGKALRMSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSM 324
Query: 224 XXXLYCKTHFEQLFKETGSFSKNFTPXXKSSDK 322
LYCK HFEQLFKE+GSF+KNF KS+DK
Sbjct: 325 EGVLYCKPHFEQLFKESGSFNKNFQSPAKSADK 423
Score = 43.7 bits (89), Expect(2) = 2e-033
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +2 / +1
Query: 329 LTRAPSKLSSXFSGTXXXXXACQKTVYPLE 418
LTR PS+++ FSGT C KTVYP+E
Sbjct: 436 LTRTPSRVAGRFSGTQETCATCSKTVYPIE 525
>gb|BP562171.1|BP562171 BP562171 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-58-M08 5',
mRNA sequence
Length = 551
Score = 120 bits (256), Expect(2) = 3e-033
Identities = 48/93 (51%), Positives = 56/93 (60%)
Frame = +2 / +2
Query: 44 RQAGVGTMSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSM 223
+ G SFTGTQ C C+K ++LL YHK+CF HCK L SYSSM
Sbjct: 170 KSEGKALRMSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSM 349
Query: 224 XXXLYCKTHFEQLFKETGSFSKNFTPXXKSSDK 322
LYCK HFEQLFKE+GSF+KNF KS+DK
Sbjct: 350 EGVLYCKPHFEQLFKESGSFNKNFQSPAKSADK 448
Score = 43.2 bits (88), Expect(2) = 3e-033
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +2 / +2
Query: 329 LTRAPSKLSSXFSGTXXXXXACQKTVYPLE 418
LTR PS+++ FSGT C KTVYP+E
Sbjct: 461 LTRTPSRVAGRFSGTQEKCATCSKTVYPIE 550
>gb|CK119661.1|CK119661 211c15.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011C15211
5-PRIME, mRNA sequence
Length = 521
Score = 120 bits (256), Expect(2) = 3e-033
Identities = 48/93 (51%), Positives = 56/93 (60%)
Frame = +2 / +2
Query: 44 RQAGVGTMSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSM 223
+ G SFTGTQ C C+K ++LL YHK+CF HCK L SYSSM
Sbjct: 137 KSEGKALRMSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSM 316
Query: 224 XXXLYCKTHFEQLFKETGSFSKNFTPXXKSSDK 322
LYCK HFEQLFKE+GSF+KNF KS+DK
Sbjct: 317 EGVLYCKPHFEQLFKESGSFNKNFQSPAKSADK 415
Score = 43.2 bits (88), Expect(2) = 3e-033
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +2 / +2
Query: 329 LTRAPSKLSSXFSGTXXXXXACQKTVYPLE 418
LTR PS+++ FSGT C KTVYP+E
Sbjct: 428 LTRTPSRVAGRFSGTQXECATCSKTVYPIE 517
>gb|AV554173.1|AV554173 AV554173 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ83b06R 5', mRNA sequence
Length = 476
Score = 118 bits (252), Expect(2) = 3e-033
Identities = 47/93 (50%), Positives = 56/93 (60%)
Frame = +2 / +1
Query: 44 RQAGVGTMSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSM 223
+ G SFTGTQ C C+K ++LL YHK+CF HCK L SYSSM
Sbjct: 40 KSEGKALRMSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSM 219
Query: 224 XXXLYCKTHFEQLFKETGSFSKNFTPXXKSSDK 322
LYCK HFEQLF+E+GSF+KNF KS+DK
Sbjct: 220 EGVLYCKPHFEQLFEESGSFNKNFQSPAKSADK 318
Score = 44.6 bits (91), Expect(2) = 3e-033
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = +2 / +1
Query: 329 LTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLE 433
LTR PS+++ SGT C KTVYP+E +T+E
Sbjct: 331 LTRTPSRVAGRVSGTQGKCGTCSKTVYPIEKVTVE 435
>emb|BX822901.1|CNS0A5ZC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB71ZB02 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1203
Score = 67.5 bits (141), Expect(4) = 1e-030
Identities = 27/38 (71%), Positives = 30/38 (78%)
Frame = +2 / +2
Query: 209 SYSSMXXXLYCKTHFEQLFKETGSFSKNFTPXXKSSDK 322
SYSSM LYCK HFEQLFKE+GSF+KNF KS+DK
Sbjct: 356 SYSSMEGVLYCKPHFEQLFKESGSFNKNFQSPAKSADK 469
Score = 56.1 bits (116), Expect(4) = 1e-030
Identities = 21/52 (40%), Positives = 26/52 (50%)
Frame = +2 / +1
Query: 44 RQAGVGTMSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGIL 199
+ G SFTGTQ C C+K ++LL YHK+CF HCK L
Sbjct: 190 KSEGKALRMSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRL 345
Score = 43.2 bits (88), Expect(4) = 1e-030
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +2 / +2
Query: 329 LTRAPSKLSSXFSGTXXXXXACQKTVYPLE 418
LTR PS+++ FSGT C KTVYP+E
Sbjct: 482 LTRTPSRVAGRFSGTQEKCATCSKTVYPIE 571
Score = 25.8 bits (50), Expect(4) = 1e-030
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2 / +2
Query: 422 LTLEXXSYHKXXXXXSHGG 478
+T+E +YHK SHGG
Sbjct: 860 VTVESQTYHKSCFKCSHGG 916
>ref|NM_100894.2| Arabidopsis thaliana transcription factor/ zinc ion binding
AT1G10200 mRNA, complete cds
Length = 944
Score = 93.6 bits (198), Expect(2) = 3e-027
Identities = 35/78 (44%), Positives = 42/78 (53%)
Frame = +2 / +1
Query: 62 TMSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYC 241
T +F GT C CDK +D L YHK CF HCKG L +Y+S LYC
Sbjct: 79 TRMAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYC 258
Query: 242 KTHFEQLFKETGSFSKNF 295
+ HF+Q FK TGS K+F
Sbjct: 259 RPHFDQNFKRTGSLEKSF 312
Score = 49.6 bits (102), Expect(2) = 3e-027
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +2 / +1
Query: 338 APSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGG 478
A +K+S+ F GT C KTVYP+E +++ YHK +HGG
Sbjct: 367 AGTKVSNMFGGTREKCVGCDKTVYPIEKVSVNGTLYHKSCFKCTHGG 507
>gb|AY085377.1| Arabidopsis thaliana clone 148790 mRNA, complete sequence
Length = 886
Score = 93.6 bits (198), Expect(2) = 3e-027
Identities = 35/78 (44%), Positives = 42/78 (53%)
Frame = +2 / +1
Query: 62 TMSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYC 241
T +F GT C CDK +D L YHK CF HCKG L +Y+S LYC
Sbjct: 79 TRMAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYC 258
Query: 242 KTHFEQLFKETGSFSKNF 295
+ HF+Q FK TGS K+F
Sbjct: 259 RPHFDQNFKRTGSLEKSF 312
Score = 49.6 bits (102), Expect(2) = 3e-027
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +2 / +1
Query: 338 APSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGG 478
A +K+S+ F GT C KTVYP+E +++ YHK +HGG
Sbjct: 367 AGTKVSNMFGGTREKCVGCDKTVYPIEKVSVNGTLYHKSCFKCTHGG 507
>gb|CB263957.1|CB263957 02-E011587-008-014-D07-pBl2 MPIZ-ADIS-008 Arabidopsis thaliana cDNA
clone MPIZp767D0714Q 5-PRIME, mRNA sequence
Length = 592
Score = 93.6 bits (198), Expect(2) = 3e-027
Identities = 35/78 (44%), Positives = 42/78 (53%)
Frame = +2 / +2
Query: 62 TMSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYC 241
T +F GT C CDK +D L YHK CF HCKG L +Y+S LYC
Sbjct: 23 TRMAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYC 202
Query: 242 KTHFEQLFKETGSFSKNF 295
+ HF+Q FK TGS K+F
Sbjct: 203 RPHFDQNFKRTGSLEKSF 256
Score = 49.6 bits (102), Expect(2) = 3e-027
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +2 / +2
Query: 338 APSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGG 478
A +K+S+ F GT C KTVYP+E +++ YHK +HGG
Sbjct: 311 AGTKVSNMFGGTREKCVGCDKTVYPIEKVSVNGTLYHKSCFKCTHGG 451
>gb|CB263958.1|CB263958 02-E011587-008-014-D07-rev MPIZ-ADIS-008 Arabidopsis thaliana cDNA
clone MPIZp767D0714Q 5-PRIME, mRNA sequence
Length = 592
Score = 93.6 bits (198), Expect(2) = 3e-027
Identities = 35/78 (44%), Positives = 42/78 (53%)
Frame = +2 / +2
Query: 62 TMSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYC 241
T +F GT C CDK +D L YHK CF HCKG L +Y+S LYC
Sbjct: 23 TRMAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYC 202
Query: 242 KTHFEQLFKETGSFSKNF 295
+ HF+Q FK TGS K+F
Sbjct: 203 RPHFDQNFKRTGSLEKSF 256
Score = 49.6 bits (102), Expect(2) = 3e-027
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +2 / +2
Query: 338 APSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGG 478
A +K+S+ F GT C KTVYP+E +++ YHK +HGG
Sbjct: 311 AGTKVSNMFGGTREKCVGCDKTVYPIEKVSVNGTLYHKSCFKCTHGG 451
>gb|CB263312.1|CB263312 26-E8880-008-014-D07-pBl2 MPIZ-ADIS-008 Arabidopsis thaliana cDNA
clone MPIZp767D0714Q 5-PRIME, mRNA sequence
Length = 554
Score = 93.6 bits (198), Expect(2) = 3e-027
Identities = 35/78 (44%), Positives = 42/78 (53%)
Frame = +2 / +2
Query: 62 TMSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYC 241
T +F GT C CDK +D L YHK CF HCKG L +Y+S LYC
Sbjct: 23 TRMAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYC 202
Query: 242 KTHFEQLFKETGSFSKNF 295
+ HF+Q FK TGS K+F
Sbjct: 203 RPHFDQNFKRTGSLEKSF 256
Score = 49.6 bits (102), Expect(2) = 3e-027
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +2 / +2
Query: 338 APSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGG 478
A +K+S+ F GT C KTVYP+E +++ YHK +HGG
Sbjct: 311 AGTKVSNMFGGTREKCVGCDKTVYPIEKVSVNGTLYHKSCFKCTHGG 451
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 582,036,043
Number of Sequences: 1013581
Number of extensions: 4053665
Number of successful extensions: 63348
Number of sequences better than 1.0e-020: 83
length of database: 302,980,290
effective HSP length: 54
effective length of database: 248,246,916
effective search space used: 26562420012
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)