TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAN24c09.yg.2.1
(425 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AB016893.1| Arabidopsis thaliana genomic DNA, chromosom... 151 1e-042
dbj|AB018111.1| Arabidopsis thaliana genomic DNA, chromosom... 163 6e-041
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 148 2e-040
emb|AL161549.2|ATCHRIV49 Arabidopsis thaliana DNA chromosom... 147 2e-040
emb|AL035526.1|ATF28A21 Arabidopsis thaliana DNA chromosome... 147 2e-040
emb|AL161595.2|ATCHRIV91 Arabidopsis thaliana DNA chromosom... 148 3e-040
emb|AL050351.1|ATT22F8 Arabidopsis thaliana DNA chromosome ... 148 3e-040
dbj|AB025637.1| Arabidopsis thaliana genomic DNA, chromosom... 150 9e-040
gb|AC007019.5| Arabidopsis thaliana chromosome 2 clone F7D8... 145 1e-039
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 163 3e-039
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 163 3e-039
gb|AF027174.1|AF027174 Arabidopsis thaliana cellulose synth... 162 4e-039
dbj|BD022678.1| Manipulation of cellulose and/or beta-1,4-g... 162 4e-039
emb|AX030946.1| Sequence 9 from Patent WO9800549 162 4e-039
gb|AI994106.1|AI994106 701498975 A. thaliana, Ohio State cl... 161 8e-039
gb|BT002335.1| Arabidopsis thaliana clone C104938 putative ... 161 8e-039
ref|NM_120599.2| Arabidopsis thaliana CESA3 (CELLULASE SYNT... 161 8e-039
emb|AL391142.1|ATT10B6 Arabidopsis thaliana DNA chromosome ... 147 4e-038
gb|AF091713.1|AF091713 Arabidopsis thaliana cellulose synth... 147 4e-038
emb|AL161581.2|ATCHRIV77 Arabidopsis thaliana DNA chromosom... 146 2e-037
emb|AL034567.1|ATF8B4 Arabidopsis thaliana DNA chromosome 4... 146 2e-037
dbj|BD022674.1| Manipulation of cellulose and/or beta-1,4-g... 146 2e-037
emb|AX030940.1| Sequence 3 from Patent WO9800549 146 2e-037
gb|AF027172.1|AF027172 Arabidopsis thaliana cellulose synth... 146 2e-037
dbj|AB006703.1| Arabidopsis thaliana genomic DNA, chromosom... 145 4e-037
emb|AJ838254.1| Arabidopsis thaliana T-DNA flanking sequenc... 142 2e-036
gb|AV536569.1|AV536569 AV536569 Arabidopsis thaliana liquid... 152 5e-036
gb|AF062485.1|AF062485 Arabidopsis thaliana cellulose synth... 152 5e-036
gb|AF375439.1| Arabidopsis thaliana AT5g64740/MVP7_7 mRNA, ... 152 5e-036
emb|AX507835.1| Sequence 2530 from Patent WO0216655 152 5e-036
gb|AY143957.1| Arabidopsis thaliana At5g64740/MVP7_7 mRNA, ... 152 5e-036
ref|NM_125870.2| Arabidopsis thaliana CESA6 (CELLULASE SYNT... 152 5e-036
gb|AF027173.1|AF027173 Arabidopsis thaliana cellulose synth... 150 2e-035
gb|AY059858.1| Arabidopsis thaliana cellulose synthase cata... 150 2e-035
gb|AY093308.1| Arabidopsis thaliana cellulose synthase cata... 150 2e-035
gb|AY136423.1| Arabidopsis thaliana cellulose synthase cata... 150 2e-035
dbj|BD022677.1| Manipulation of cellulose and/or beta-1,4-g... 150 2e-035
emb|AX505864.1| Sequence 559 from Patent WO0216655 150 2e-035
emb|AX030944.1| Sequence 7 from Patent WO9800549 150 2e-035
gb|BT008832.1| Arabidopsis thaliana At5g09870 mRNA, complet... 150 2e-035
ref|NM_121024.1| Arabidopsis thaliana CESA5 (CELLULASE SYNT... 150 2e-035
ref|NM_120095.2| Arabidopsis thaliana CESA2; cellulose synt... 150 2e-035
gb|AF088917.1|AF088917 Arabidopsis thaliana cellulose synth... 150 2e-035
gb|AY139754.1| Arabidopsis thaliana AT5g17420/T10B6_80 mRNA... 150 2e-035
gb|BT004543.1| Arabidopsis thaliana AT5g17420/T10B6_80 gene... 150 2e-035
ref|NM_121748.2| Arabidopsis thaliana IRX3 (IRREGULAR XYLEM... 150 2e-035
dbj|AK220815.1| Arabidopsis thaliana mRNA for cellulose syn... 148 8e-035
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 148 1e-034
gb|AQ967081.1|AQ967081 LERIP40TF LERG Arabidopsis thaliana ... 147 1e-034
gb|AQ967082.1|AQ967082 LERIP40TR LERG Arabidopsis thaliana ... 147 1e-034
ref|NM_127746.1| Arabidopsis thaliana CESA9 (CELLULASE SYNT... 147 1e-034
gb|AC006300.4| Arabidopsis thaliana chromosome 2 clone F13B... 137 2e-034
gb|AF267742.1|AF267742 Arabidopsis thaliana cellulose synth... 145 5e-034
gb|AY099636.1| Arabidopsis thaliana cellulose synthase-like... 145 5e-034
ref|NM_117994.2| Arabidopsis thaliana CESA8 (CELLULASE SYNT... 145 5e-034
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 145 7e-034
gb|H36425.1|H36425 14093 Lambda-PRL2 Arabidopsis thaliana c... 145 7e-034
gb|CB261308.1|CB261308 08-E9409-012-002-P13-t7r MPIZ-ADIS-0... 144 1e-033
gb|CD534481.1|CD534481 39I11 Arabidopsis Leaf Senescence Li... 144 1e-033
gb|CK121679.1|CK121679 202d06.p1 AtM1 Arabidopsis thaliana ... 144 1e-033
dbj|BD022676.1| Manipulation of cellulose and/or beta-1,4-g... 144 1e-033
dbj|BD022679.1| Manipulation of cellulose and/or beta-1,4-g... 144 1e-033
emb|AX030942.1| Sequence 5 from Patent WO9800549 144 1e-033
emb|AX030948.1| Sequence 11 from Patent WO9800549 144 1e-033
gb|AF458083.1| Arabidopsis thaliana cellulose synthase (IRX... 144 1e-033
gb|BT005710.1| Arabidopsis thaliana clone RAFL15-30-K05 (R5... 144 1e-033
gb|BT006111.1| Arabidopsis thaliana clone U50150 putative c... 144 1e-033
gb|BT008654.1| Arabidopsis thaliana clone RAFL09-89-G08 (R1... 144 1e-033
emb|BX833432.1|CNS09Z0L Arabidopsis thaliana Full-length cD... 144 1e-033
dbj|AK222115.1| Arabidopsis thaliana mRNA for cellulose syn... 144 1e-033
ref|NM_119393.2| Arabidopsis thaliana CESA1 (CELLULASE SYNT... 144 1e-033
ref|NM_123770.2| Arabidopsis thaliana CESA4 (CELLULASE SYNT... 144 1e-033
gb|B24204.1|B24204 F19F17TF IGF Arabidopsis thaliana genomi... 119 8e-032
emb|BX821788.1|CNS0A924 Arabidopsis thaliana Full-length cD... 138 1e-031
ref|NM_128111.2| Arabidopsis thaliana CESA10 (CELLULASE SYN... 138 1e-031
emb|BX832166.1|CNS0A1ML Arabidopsis thaliana Full-length cD... 82 2e-031
emb|BX822015.1|CNS0AAAJ Arabidopsis thaliana Full-length cD... 132 7e-030
dbj|BD022673.1| Manipulation of cellulose and/or beta-1,4-g... 131 1e-029
emb|AX030938.1| Sequence 1 from Patent WO9800549 131 1e-029
gb|BP841009.1|BP841009 BP841009 RAFL19 Arabidopsis thaliana... 123 2e-027
gb|AI999519.1|AI999519 701556274 A. thaliana, Columbia Col-... 120 3e-026
emb|AL758408.1| Arabidopsis thaliana T-DNA flanking sequenc... 118 7e-026
gb|AC002334.3| Arabidopsis thaliana chromosome 2 clone F25I... 105 2e-024
ref|NM_128870.3| Arabidopsis thaliana ATCSLD1; cellulose sy... 105 3e-024
dbj|AK175868.1| Arabidopsis thaliana mRNA for putative cell... 105 3e-024
ref|NM_121747.2| Arabidopsis thaliana unknown protein AT5G1... 112 5e-024
ref|NM_180507.1| Arabidopsis thaliana unknown protein AT5G1... 112 5e-024
gb|AV442267.1|AV442267 AV442267 Arabidopsis thaliana above-... 112 6e-024
ref|NM_123771.3| Arabidopsis thaliana unknown protein AT5G4... 109 4e-023
gb|BH611908.1|BH611908 SALK_031874 Arabidopsis thaliana TDN... 109 4e-023
gb|BT005743.1| Arabidopsis thaliana clone RAFL15-50-B21 (R5... 109 6e-023
emb|AL035538.1|ATF20D10 Arabidopsis thaliana DNA chromosome... 109 6e-023
emb|AL161593.2|ATCHRIV89 Arabidopsis thaliana DNA chromosom... 109 6e-023
ref|NM_119980.2| Arabidopsis thaliana ATCSLD4; cellulose sy... 109 6e-023
emb|BX829237.1|CNS0A4ID Arabidopsis thaliana Full-length cD... 108 8e-023
emb|AL391141.1|ATF2K13 Arabidopsis thaliana DNA chromosome ... 107 2e-022
ref|NM_121697.3| Arabidopsis thaliana ATCSLD2; cellulose sy... 107 2e-022
emb|BX002729.1| Arabidopsis thaliana T-DNA flanking sequenc... 106 4e-022
gb|AV544917.1|AV544917 AV544917 Arabidopsis thaliana roots ... 106 4e-022
gb|AV553463.1|AV553463 AV553463 Arabidopsis thaliana roots ... 105 7e-022
gb|AF232907.1|AF232907 Arabidopsis thaliana cellulose synth... 105 1e-021
gb|AF360180.1| Arabidopsis thaliana putative cellulose synt... 105 1e-021
gb|AY039996.1| Arabidopsis thaliana putative cellulose synt... 105 1e-021
emb|AJ297948.1|ATH297948 Arabidopsis thaliana CSLD3 gene fo... 105 1e-021
gb|AC012328.6|ATAC012328 Arabidopsis thaliana chromosome II... 105 1e-021
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 105 1e-021
ref|NM_111175.2| Arabidopsis thaliana CSLD3 (CELLULOSE SYNT... 105 1e-021
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 105 1e-021
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 101 1e-021
gb|AC084165.1|AC084165 Arabidopsis thaliana chromosome 1 BA... 97 1e-021
ref|NM_102951.1| Arabidopsis thaliana ATCSLD6; cellulose sy... 97 1e-021
gb|AA650885.1|AA650885 30999 Lambda-PRL2 Arabidopsis thalia... 104 1e-021
gb|AV550172.1|AV550172 AV550172 Arabidopsis thaliana roots ... 104 2e-021
gb|AC009525.3| Arabidopsis thaliana chromosome I BAC F22D16... 101 9e-021
gb|AC022521.4|AC022521 Arabidopsis thaliana chromosome I BA... 101 9e-021
ref|NM_100153.2| Arabidopsis thaliana ATCSLD5; cellulose sy... 101 9e-021
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 101 9e-021
>dbj|AB016893.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MYH9
Length = 82390
Score = 151 bits (325), Expect(2) = 1e-042
Identities = 61/90 (67%), Positives = 72/90 (80%)
Frame = +1 / +1
Query: 139 FHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQ 318
F LQ++N AS+ FM+LF I T IL M+W VGIDDWWRNEQFWVIGGVS+HLFA+FQ
Sbjct: 30142 FFWLQISNYASILFMALFGSIAVTGILEMQWGKVGIDDWWRNEQFWVIGGVSAHLFALFQ 30321
Query: 319 GLLXVIAGVDTSXTXTSKGGDDDEFSELYL 408
GLL V+AGV+T+ T TSK DD EFSELY+
Sbjct: 30322 GLLKVLAGVETNFTVTSKAADDGEFSELYI 30411
Score = 92.3 bits (195), Expect(2) = 5e-022
Identities = 44/81 (54%), Positives = 50/81 (61%)
Frame = -1 / -3
Query: 368 DVXVXLVSTPAMTXRSP*NTAKRCEDTPPMTQNCSFLHQSSIPTPLHLIXRMLVAKMQIK 189
DV V VSTPA T R P AKR +TPP+TQNCSFLHQSSIPT H I RM V + K
Sbjct: 30371 DVTVKFVSTPAKTFRRPWKRAKR*AETPPITQNCSFLHQSSIPTLPHCISRMPVTAIDPK 30192
Query: 188 SDMNHRLATLFSCSR*NSEHK 126
S M LA L C++ + K
Sbjct: 30191 SAMKRILA*LLICNQKKEQRK 30129
Score = 42.8 bits (87), Expect(2) = 1e-042
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +1 / +2
Query: 1 TLPAICLLTGKFITPEVKLN 60
+LPAICLLTGKFI PEVK N
Sbjct: 29972 SLPAICLLTGKFIVPEVKHN 30031
Score = 33.1 bits (66), Expect(2) = 5e-022
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = -1 / -2
Query: 59 LSFTSGVINFPVNKQMAG 6
L FTSG +NFPV +Q+AG
Sbjct: 30030 LCFTSGTMNFPVRRQIAG 29977
>dbj|AB018111.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K2A11
Length = 29292
Score = 163 bits (350), Expect(2) = 6e-041
Identities = 61/85 (71%), Positives = 75/85 (88%)
Frame = +1 / -1
Query: 133 SLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWVIGGVSSHLFAV 312
S+ LLQ++N+AS+WF+SLF+ IFAT IL MRWSGVGID+WWRNEQFWVIGGVS+HLFAV
Sbjct: 11604 SIVPLLQISNIASIWFLSLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAV 11425
Query: 313 FQGLLXVIAGVDTSXTXTSKGGDDD 387
FQG+L V+AG+DT+ T TSK D+D
Sbjct: 11424 FQGILKVLAGIDTNFTVTSKASDED 11350
Score = 113 bits (241), Expect = 3e-024
Identities = 49/76 (64%), Positives = 54/76 (71%)
Frame = -1 / +2
Query: 371 FDVXVXLVSTPAMTXRSP*NTAKRCEDTPPMTQNCSFLHQSSIPTPLHLIXRMLVAKMQI 192
F+V V VS PA T R P*NTA + DTPPMTQNCSFLH SS+PTPLHLI + VAKM+
Sbjct: 11366 FEVTVKFVSIPARTLRIP*NTANK*ADTPPMTQNCSFLHHSSMPTPLHLISSIPVAKMER 11545
Query: 191 KSDMNHRLATLFSCSR 144
K D NH LA L C R
Sbjct: 11546 KRDRNHILAMLLICKR 11593
Score = 32.2 bits (64), Expect(2) = 6e-041
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1 / -2
Query: 1 TLPAICLLTGKFITPEV 51
TLPA+CL T +FI P+V
Sbjct: 11786 TLPAVCLFTNQFIIPQV 11736
>emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long arm
Length = 14497843
Score = 148 bits (317), Expect(2) = 3e-040
Identities = 58/86 (67%), Positives = 68/86 (79%)
Frame = +1 / +1
Query: 151 QLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGLLX 330
Q++N A + FM +FI I T IL M+W GVGIDDWWRNEQFWVIGG SSHLFA+FQGLL
Sbjct: 14214097 QISNYAGILFMLMFISIAVTGILEMQWGGVGIDDWWRNEQFWVIGGASSHLFALFQGLLK 14214276
Query: 331 VIAGVDTSXTXTSKGGDDDEFSELYL 408
V+AGV+T+ T TSK DD FSELY+
Sbjct: 14214277 VLAGVNTNFTVTSKAADDGAFSELYI 14214354
Score = 147 bits (316), Expect(2) = 2e-040
Identities = 59/88 (67%), Positives = 72/88 (81%)
Frame = +1 / -1
Query: 145 LLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGL 324
LLQL+N+AS+ F+ LFI I TS+L +RWSGV I+D WRNEQFWVIGGVS+HLFAVFQG
Sbjct: 6226198 LLQLSNLASMLFLGLFISIILTSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQGF 6226019
Query: 325 LXVIAGVDTSXTXTSKGGDDDEFSELYL 408
L ++AG+DT+ T TSK DD EF ELY+
Sbjct: 6226018 LKMLAGLDTNFTVTSKTADDLEFGELYI 6225935
Score = 146 bits (313), Expect(2) = 2e-037
Identities = 56/81 (69%), Positives = 67/81 (82%)
Frame = +1 / -2
Query: 145 LLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGL 324
LLQ++N AS+WF+ LFI I T IL +RWSGV I+DWWRNEQFWVIGG S+HLFAVFQGL
Sbjct: 11554386 LLQISNYASIWFILLFISIAVTGILELRWSGVSIEDWWRNEQFWVIGGTSAHLFAVFQGL 11554207
Query: 325 LXVIAGVDTSXTXTSKGGDDD 387
L V+AG+DT+ T TSK D+D
Sbjct: 11554206 LKVLAGIDTNFTVTSKATDED 11554144
Score = 109 bits (232), Expect = 6e-023
Identities = 36/72 (50%), Positives = 56/72 (77%)
Frame = +1 / -2
Query: 172 LWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGLLXVIAGVDT 351
++ + + IC+ ++L ++WSG+G+++WWRNEQ+W+I G SSHL+AV QG+L VIAG++
Sbjct: 13823463 VYLLMITICLIGLAVLEVKWSGIGLEEWWRNEQWWLISGTSSHLYAVVQGVLKVIAGIEI 13823284
Query: 352 SXTXTSKGGDDD 387
S T T+K G DD
Sbjct: 13823283 SFTLTTKSGGDD 13823248
Score = 94.1 bits (199), Expect(2) = 1e-021
Identities = 41/74 (55%), Positives = 46/74 (62%)
Frame = -1 / -3
Query: 371 FDVXVXLVSTPAMTXRSP*NTAKRCEDTPPMTQNCSFLHQSSIPTPLHLIXRMLVAKMQI 192
F+V V V TPA T P*N A RCE+ PP+TQNCSFLHQSSIPTP H I R+ V M +
Sbjct: 14214317 FEVTVKFVLTPARTLSKP*NRANRCEEAPPITQNCSFLHQSSIPTPPHCISRIPVTAMDM 14214138
Query: 191 KSDMNHRLATLFSC 150
M A L C
Sbjct: 14214137 NMSMKSIPA*LLIC 14214096
Score = 39.6 bits (80), Expect(2) = 2e-040
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = +1 / -2
Query: 1 TLPAICLLTGKFITPEVKLNQL*FCCLRKTKL 96
TLPAICLLTGKFI P V + * L +K+
Sbjct: 6226320 TLPAICLLTGKFIIPTVTFSYY*LLWLGYSKI 6226225
Score = 38.6 bits (78), Expect(2) = 3e-040
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +1 / +1
Query: 1 TLPAICLLTGKFITPEV 51
+LPA+CLLTGKFI PEV
Sbjct: 14213968 SLPAVCLLTGKFIVPEV 14214018
Score = 30.9 bits (61), Expect(2) = 2e-037
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1 / -1
Query: 4 LPAICLLTGKFITPEV 51
LPA CL+T +FI PEV
Sbjct: 11554504 LPAFCLITDRFIIPEV 11554457
Score = 29.9 bits (59), Expect(2) = 1e-021
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -1 / -3
Query: 50 TSGVINFPVNKQMAG 6
TSG +NFPV+KQ AG
Sbjct: 14214017 TSGTMNFPVSKQTAG 14213973
>emb|AL161549.2|ATCHRIV49 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 49
Length = 199075
Score = 147 bits (316), Expect(2) = 2e-040
Identities = 59/88 (67%), Positives = 72/88 (81%)
Frame = +1 / -2
Query: 145 LLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGL 324
LLQL+N+AS+ F+ LFI I TS+L +RWSGV I+D WRNEQFWVIGGVS+HLFAVFQG
Sbjct: 91581 LLQLSNLASMLFLGLFISIILTSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQGF 91402
Query: 325 LXVIAGVDTSXTXTSKGGDDDEFSELYL 408
L ++AG+DT+ T TSK DD EF ELY+
Sbjct: 91401 LKMLAGLDTNFTVTSKTADDLEFGELYI 91318
Score = 39.6 bits (80), Expect(2) = 2e-040
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = +1 / -3
Query: 1 TLPAICLLTGKFITPEVKLNQL*FCCLRKTKL 96
TLPAICLLTGKFI P V + * L +K+
Sbjct: 91703 TLPAICLLTGKFIIPTVTFSYY*LLWLGYSKI 91608
>emb|AL035526.1|ATF28A21 Arabidopsis thaliana DNA chromosome 4, BAC clone F28A21 (ESSA project)
Length = 94301
Score = 147 bits (316), Expect(2) = 2e-040
Identities = 59/88 (67%), Positives = 72/88 (81%)
Frame = +1 / -3
Query: 145 LLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGL 324
LLQL+N+AS+ F+ LFI I TS+L +RWSGV I+D WRNEQFWVIGGVS+HLFAVFQG
Sbjct: 72300 LLQLSNLASMLFLGLFISIILTSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQGF 72121
Query: 325 LXVIAGVDTSXTXTSKGGDDDEFSELYL 408
L ++AG+DT+ T TSK DD EF ELY+
Sbjct: 72120 LKMLAGLDTNFTVTSKTADDLEFGELYI 72037
Score = 39.6 bits (80), Expect(2) = 2e-040
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = +1 / -1
Query: 1 TLPAICLLTGKFITPEVKLNQL*FCCLRKTKL 96
TLPAICLLTGKFI P V + * L +K+
Sbjct: 72422 TLPAICLLTGKFIIPTVTFSYY*LLWLGYSKI 72327
>emb|AL161595.2|ATCHRIV91 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 91
Length = 198151
Score = 148 bits (317), Expect(2) = 3e-040
Identities = 58/86 (67%), Positives = 68/86 (79%)
Frame = +1 / +1
Query: 151 QLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGLLX 330
Q++N A + FM +FI I T IL M+W GVGIDDWWRNEQFWVIGG SSHLFA+FQGLL
Sbjct: 21472 QISNYAGILFMLMFISIAVTGILEMQWGGVGIDDWWRNEQFWVIGGASSHLFALFQGLLK 21651
Query: 331 VIAGVDTSXTXTSKGGDDDEFSELYL 408
V+AGV+T+ T TSK DD FSELY+
Sbjct: 21652 VLAGVNTNFTVTSKAADDGAFSELYI 21729
Score = 94.1 bits (199), Expect(2) = 1e-021
Identities = 41/74 (55%), Positives = 46/74 (62%)
Frame = -1 / -3
Query: 371 FDVXVXLVSTPAMTXRSP*NTAKRCEDTPPMTQNCSFLHQSSIPTPLHLIXRMLVAKMQI 192
F+V V V TPA T P*N A RCE+ PP+TQNCSFLHQSSIPTP H I R+ V M +
Sbjct: 21692 FEVTVKFVLTPARTLSKP*NRANRCEEAPPITQNCSFLHQSSIPTPPHCISRIPVTAMDM 21513
Query: 191 KSDMNHRLATLFSC 150
M A L C
Sbjct: 21512 NMSMKSIPA*LLIC 21471
Score = 38.6 bits (78), Expect(2) = 3e-040
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +1 / +1
Query: 1 TLPAICLLTGKFITPEV 51
+LPA+CLLTGKFI PEV
Sbjct: 21343 SLPAVCLLTGKFIVPEV 21393
Score = 29.9 bits (59), Expect(2) = 1e-021
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -1 / -3
Query: 50 TSGVINFPVNKQMAG 6
TSG +NFPV+KQ AG
Sbjct: 21392 TSGTMNFPVSKQTAG 21348
>emb|AL050351.1|ATT22F8 Arabidopsis thaliana DNA chromosome 4, BAC clone T22F8 (ESSA project)
Length = 89035
Score = 148 bits (317), Expect(2) = 3e-040
Identities = 58/86 (67%), Positives = 68/86 (79%)
Frame = +1 / +1
Query: 151 QLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGLLX 330
Q++N A + FM +FI I T IL M+W GVGIDDWWRNEQFWVIGG SSHLFA+FQGLL
Sbjct: 83995 QISNYAGILFMLMFISIAVTGILEMQWGGVGIDDWWRNEQFWVIGGASSHLFALFQGLLK 84174
Query: 331 VIAGVDTSXTXTSKGGDDDEFSELYL 408
V+AGV+T+ T TSK DD FSELY+
Sbjct: 84175 VLAGVNTNFTVTSKAADDGAFSELYI 84252
Score = 94.1 bits (199), Expect(2) = 1e-021
Identities = 41/74 (55%), Positives = 46/74 (62%)
Frame = -1 / -3
Query: 371 FDVXVXLVSTPAMTXRSP*NTAKRCEDTPPMTQNCSFLHQSSIPTPLHLIXRMLVAKMQI 192
F+V V V TPA T P*N A RCE+ PP+TQNCSFLHQSSIPTP H I R+ V M +
Sbjct: 84215 FEVTVKFVLTPARTLSKP*NRANRCEEAPPITQNCSFLHQSSIPTPPHCISRIPVTAMDM 84036
Query: 191 KSDMNHRLATLFSC 150
M A L C
Sbjct: 84035 NMSMKSIPA*LLIC 83994
Score = 38.6 bits (78), Expect(2) = 3e-040
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +1 / +1
Query: 1 TLPAICLLTGKFITPEV 51
+LPA+CLLTGKFI PEV
Sbjct: 83866 SLPAVCLLTGKFIVPEV 83916
Score = 29.9 bits (59), Expect(2) = 1e-021
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -1 / -3
Query: 50 TSGVINFPVNKQMAG 6
TSG +NFPV+KQ AG
Sbjct: 83915 TSGTMNFPVSKQTAG 83871
>dbj|AB025637.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MVP7
Length = 39645
Score = 150 bits (322), Expect(2) = 9e-040
Identities = 60/86 (69%), Positives = 70/86 (81%)
Frame = +1 / +1
Query: 151 QLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGLLX 330
Q++N AS+ FM+LF I T IL M+W VGIDDWWRNEQFWVIGGVS+HLFA+FQGLL
Sbjct: 22729 QISNYASILFMALFSSIAITGILEMQWGKVGIDDWWRNEQFWVIGGVSAHLFALFQGLLK 22908
Query: 331 VIAGVDTSXTXTSKGGDDDEFSELYL 408
V+AGVDT+ T TSK DD EFS+LYL
Sbjct: 22909 VLAGVDTNFTVTSKAADDGEFSDLYL 22986
Score = 94.5 bits (200), Expect(2) = 8e-021
Identities = 43/69 (62%), Positives = 46/69 (66%)
Frame = -1 / -2
Query: 371 FDVXVXLVSTPAMTXRSP*NTAKRCEDTPPMTQNCSFLHQSSIPTPLHLIXRMLVAKMQI 192
FDV V LVSTPA T R P A RC +TPPMTQNCSFLHQSSIPT H I R+ V +
Sbjct: 22949 FDVTVKLVSTPARTLRRPWKRANRCAETPPMTQNCSFLHQSSIPTLPHCISRIPVIAIDE 22770
Query: 191 KSDMNHRLA 165
KS M LA
Sbjct: 22769 KSAMKRILA 22743
Score = 41.4 bits (84), Expect(2) = 9e-040
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +1 / +3
Query: 1 TLPAICLLTGKFITPEVK 54
+LPAICLLTGKFI PEVK
Sbjct: 22524 SLPAICLLTGKFIVPEVK 22577
Score = 33.6 bits (67), Expect(2) = 8e-021
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -1 / -3
Query: 53 FTSGVINFPVNKQMAG 6
FTSG +NFPV +QMAG
Sbjct: 22576 FTSGTMNFPVRRQMAG 22529
>gb|AC007019.5| Arabidopsis thaliana chromosome 2 clone F7D8 map mi238, complete
sequence
Length = 107848
Score = 145 bits (311), Expect(2) = 1e-039
Identities = 56/86 (65%), Positives = 68/86 (79%)
Frame = +1 / +1
Query: 151 QLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGLLX 330
Q++N A + F+ +F+ I T IL M+W +GIDDWWRNEQFWVIGGVSSHLFA+FQGLL
Sbjct: 19831 QISNYAGILFLLMFMSIAVTGILEMQWGKIGIDDWWRNEQFWVIGGVSSHLFALFQGLLK 20010
Query: 331 VIAGVDTSXTXTSKGGDDDEFSELYL 408
V+AGV T+ T TSK DD EFSELY+
Sbjct: 20011 VLAGVSTNFTVTSKAADDGEFSELYI 20088
Score = 86.8 bits (183), Expect(2) = 8e-021
Identities = 41/76 (53%), Positives = 44/76 (57%)
Frame = -1 / -3
Query: 368 DVXVXLVSTPAMTXRSP*NTAKRCEDTPPMTQNCSFLHQSSIPTPLHLIXRMLVAKMQIK 189
DV V V TPA T P*N A RCE+TPPMTQNCSFLHQSSIP H I + V M I
Sbjct: 20048 DVTVKFVLTPARTLSKP*NRANRCEETPPMTQNCSFLHQSSIPILPHCISSIPVTAMDIN 19869
Query: 188 SDMNHRLATLFSCSR* 141
A L C +*
Sbjct: 19868 ISRKSIPA*LLICQK* 19821
Score = 39.1 bits (79), Expect(2) = 1e-039
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +1 / +2
Query: 1 TLPAICLLTGKFITPEV 51
+LPAICLLTGKFI PEV
Sbjct: 19670 SLPAICLLTGKFIVPEV 19720
Score = 34.5 bits (69), Expect(2) = 8e-021
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = -1 / -2
Query: 53 FTSGVINFPVNKQMAGN 3
FTSG +NFPV++QMAG+
Sbjct: 19722 FTSGTMNFPVSRQMAGS 19672
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 163 bits (350), Expect = 3e-039
Identities = 61/85 (71%), Positives = 75/85 (88%)
Frame = +1 / -1
Query: 133 SLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWVIGGVSSHLFAV 312
S+ LLQ++N+AS+WF+SLF+ IFAT IL MRWSGVGID+WWRNEQFWVIGGVS+HLFAV
Sbjct: 1460044 SIVPLLQISNIASIWFLSLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAV 1459865
Query: 313 FQGLLXVIAGVDTSXTXTSKGGDDD 387
FQG+L V+AG+DT+ T TSK D+D
Sbjct: 1459864 FQGILKVLAGIDTNFTVTSKASDED 1459790
Score = 151 bits (325), Expect = 9e-036
Identities = 61/90 (67%), Positives = 72/90 (80%)
Frame = +1 / +3
Query: 139 FHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQ 318
F LQ++N AS+ FM+LF I T IL M+W VGIDDWWRNEQFWVIGGVS+HLFA+FQ
Sbjct: 2896464 FFWLQISNYASILFMALFGSIAVTGILEMQWGKVGIDDWWRNEQFWVIGGVSAHLFALFQ 2896643
Query: 319 GLLXVIAGVDTSXTXTSKGGDDDEFSELYL 408
GLL V+AGV+T+ T TSK DD EFSELY+
Sbjct: 2896644 GLLKVLAGVETNFTVTSKAADDGEFSELYI 2896733
Score = 150 bits (322), Expect = 2e-035
Identities = 60/86 (69%), Positives = 70/86 (81%)
Frame = +1 / +2
Query: 151 QLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGLLX 330
Q++N AS+ FM+LF I T IL M+W VGIDDWWRNEQFWVIGGVS+HLFA+FQGLL
Sbjct: 22911062 QISNYASILFMALFSSIAITGILEMQWGKVGIDDWWRNEQFWVIGGVSAHLFALFQGLLK 22911241
Query: 331 VIAGVDTSXTXTSKGGDDDEFSELYL 408
V+AGVDT+ T TSK DD EFS+LYL
Sbjct: 22911242 VLAGVDTNFTVTSKAADDGEFSDLYL 22911319
Score = 147 bits (315), Expect = 2e-034
Identities = 55/85 (64%), Positives = 70/85 (82%)
Frame = +1 / -1
Query: 151 QLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGLLX 330
Q++ ASL+F+SLF+ I T IL +RWSGV I++WWRNEQFWVIGG+S+HLFAV QGLL
Sbjct: 5490418 QISTFASLFFISLFMSIIVTGILELRWSGVSIEEWWRNEQFWVIGGISAHLFAVVQGLLK 5490239
Query: 331 VIAGVDTSXTXTSKGGDDDEFSELY 405
++AG+DT+ T TSK DDD+F ELY
Sbjct: 5490238 ILAGIDTNFTVTSKATDDDDFGELY 5490164
Score = 145 bits (312), Expect = 5e-034
Identities = 56/81 (69%), Positives = 69/81 (85%)
Frame = +1 / +3
Query: 145 LLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGL 324
L+Q+NN AS+WF++LF+ I AT+IL +RWSGV I+D WRNEQFWVIGGVS+HLFAVFQGL
Sbjct: 16111689 LIQINNFASIWFLALFLSIIATAILELRWSGVSINDLWRNEQFWVIGGVSAHLFAVFQGL 16111868
Query: 325 LXVIAGVDTSXTXTSKGGDDD 387
L V+ GVDT+ T TSKG D+
Sbjct: 16111869 LKVLFGVDTNFTVTSKGASDE 16111931
Score = 113 bits (241), Expect = 3e-024
Identities = 49/76 (64%), Positives = 54/76 (71%)
Frame = -1 / +3
Query: 371 FDVXVXLVSTPAMTXRSP*NTAKRCEDTPPMTQNCSFLHQSSIPTPLHLIXRMLVAKMQI 192
F+V V VS PA T R P*NTA + DTPPMTQNCSFLH SS+PTPLHLI + VAKM+
Sbjct: 1459806 FEVTVKFVSIPARTLRIP*NTANK*ADTPPMTQNCSFLHHSSMPTPLHLISSIPVAKMER 1459985
Query: 191 KSDMNHRLATLFSCSR 144
K D NH LA L C R
Sbjct: 1459986 KRDRNHILAMLLICKR 1460033
Score = 107 bits (228), Expect = 2e-022
Identities = 42/96 (43%), Positives = 62/96 (64%)
Frame = +1 / +3
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C L + F + LN ++ + + I + ++L ++WSG+ +++WWRNEQFW+
Sbjct: 5327631 YCFLPALSLFSGQFIVQTLNVTFLVYLLIISITLCLLALLEIKWSGISLEEWWRNEQFWL 5327810
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDD 387
IGG S+HL AV QGLL V+AGV+ S T TSK G DD
Sbjct: 5327811 IGGTSAHLAAVLQGLLKVVAGVEISFTLTSKSGGDD 5327918
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 163 bits (350), Expect = 3e-039
Identities = 61/85 (71%), Positives = 75/85 (88%)
Frame = +1 / -2
Query: 133 SLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWVIGGVSSHLFAV 312
S+ LLQ++N+AS+WF+SLF+ IFAT IL MRWSGVGID+WWRNEQFWVIGGVS+HLFAV
Sbjct: 1531007 SIVPLLQISNIASIWFLSLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAV 1530828
Query: 313 FQGLLXVIAGVDTSXTXTSKGGDDD 387
FQG+L V+AG+DT+ T TSK D+D
Sbjct: 1530827 FQGILKVLAGIDTNFTVTSKASDED 1530753
Score = 151 bits (325), Expect = 9e-036
Identities = 61/90 (67%), Positives = 72/90 (80%)
Frame = +1 / +3
Query: 139 FHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQ 318
F LQ++N AS+ FM+LF I T IL M+W VGIDDWWRNEQFWVIGGVS+HLFA+FQ
Sbjct: 3077379 FFWLQISNYASILFMALFGSIAVTGILEMQWGKVGIDDWWRNEQFWVIGGVSAHLFALFQ 3077558
Query: 319 GLLXVIAGVDTSXTXTSKGGDDDEFSELYL 408
GLL V+AGV+T+ T TSK DD EFSELY+
Sbjct: 3077559 GLLKVLAGVETNFTVTSKAADDGEFSELYI 3077648
Score = 150 bits (322), Expect = 2e-035
Identities = 60/86 (69%), Positives = 70/86 (81%)
Frame = +1 / +3
Query: 151 QLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGLLX 330
Q++N AS+ FM+LF I T IL M+W VGIDDWWRNEQFWVIGGVS+HLFA+FQGLL
Sbjct: 25902975 QISNYASILFMALFSSIAITGILEMQWGKVGIDDWWRNEQFWVIGGVSAHLFALFQGLLK 25903154
Query: 331 VIAGVDTSXTXTSKGGDDDEFSELYL 408
V+AGVDT+ T TSK DD EFS+LYL
Sbjct: 25903155 VLAGVDTNFTVTSKAADDGEFSDLYL 25903232
Score = 147 bits (315), Expect = 2e-034
Identities = 55/85 (64%), Positives = 70/85 (82%)
Frame = +1 / -2
Query: 151 QLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGLLX 330
Q++ ASL+F+SLF+ I T IL +RWSGV I++WWRNEQFWVIGG+S+HLFAV QGLL
Sbjct: 5737445 QISTFASLFFISLFMSIIVTGILELRWSGVSIEEWWRNEQFWVIGGISAHLFAVVQGLLK 5737266
Query: 331 VIAGVDTSXTXTSKGGDDDEFSELY 405
++AG+DT+ T TSK DDD+F ELY
Sbjct: 5737265 ILAGIDTNFTVTSKATDDDDFGELY 5737191
Score = 145 bits (312), Expect = 5e-034
Identities = 56/81 (69%), Positives = 69/81 (85%)
Frame = +1 / +3
Query: 145 LLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGL 324
L+Q+NN AS+WF++LF+ I AT+IL +RWSGV I+D WRNEQFWVIGGVS+HLFAVFQGL
Sbjct: 17736195 LIQINNFASIWFLALFLSIIATAILELRWSGVSINDLWRNEQFWVIGGVSAHLFAVFQGL 17736374
Query: 325 LXVIAGVDTSXTXTSKGGDDD 387
L V+ GVDT+ T TSKG D+
Sbjct: 17736375 LKVLFGVDTNFTVTSKGASDE 17736437
Score = 113 bits (241), Expect = 3e-024
Identities = 49/76 (64%), Positives = 54/76 (71%)
Frame = -1 / +1
Query: 371 FDVXVXLVSTPAMTXRSP*NTAKRCEDTPPMTQNCSFLHQSSIPTPLHLIXRMLVAKMQI 192
F+V V VS PA T R P*NTA + DTPPMTQNCSFLH SS+PTPLHLI + VAKM+
Sbjct: 1530769 FEVTVKFVSIPARTLRIP*NTANK*ADTPPMTQNCSFLHHSSMPTPLHLISSIPVAKMER 1530948
Query: 191 KSDMNHRLATLFSCSR 144
K D NH LA L C R
Sbjct: 1530949 KRDRNHILAMLLICKR 1530996
Score = 107 bits (228), Expect = 2e-022
Identities = 42/96 (43%), Positives = 62/96 (64%)
Frame = +1 / +3
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C L + F + LN ++ + + I + ++L ++WSG+ +++WWRNEQFW+
Sbjct: 5564658 YCFLPALSLFSGQFIVQTLNVTFLVYLLIISITLCLLALLEIKWSGISLEEWWRNEQFWL 5564837
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDD 387
IGG S+HL AV QGLL V+AGV+ S T TSK G DD
Sbjct: 5564838 IGGTSAHLAAVLQGLLKVVAGVEISFTLTSKSGGDD 5564945
>gb|AF027174.1|AF027174 Arabidopsis thaliana cellulose synthase catalytic subunit (Ath-B)
mRNA, complete cds
Length = 3682
Score = 162 bits (349), Expect = 4e-039
Identities = 62/96 (64%), Positives = 78/96 (81%)
Frame = +1 / +1
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C L V + F + Q++N+AS+WF+SLF+ IFAT IL MRWSGVGID+WWRNEQFWV
Sbjct: 2815 YCTLLAVCLFTNQFIIPQISNIASIWFLSLFLSIFATGILEMRWSGVGIDEWWRNEQFWV 2994
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDD 387
IGGVS+HLFAVFQG+L V+AG+DT+ T TSK D+D
Sbjct: 2995 IGGVSAHLFAVFQGILKVLAGIDTNFTVTSKASDED 3102
Score = 107 bits (229), Expect = 1e-022
Identities = 47/71 (66%), Positives = 52/71 (73%)
Frame = -1 / -3
Query: 371 FDVXVXLVSTPAMTXRSP*NTAKRCEDTPPMTQNCSFLHQSSIPTPLHLIXRMLVAKMQI 192
F+V V VS PA T R P*NTA + DTPPMTQNCSFLH SS+PTPLHLI + VAKM+
Sbjct: 3086 FEVTVKFVSIPARTLRIP*NTANK*ADTPPMTQNCSFLHHSSMPTPLHLISSIPVAKMER 2907
Query: 191 KSDMNHRLATL 159
K D NH LA L
Sbjct: 2906 KRDRNHILAML 2874
>dbj|BD022678.1| Manipulation of cellulose and/or beta-1,4-glucan
Length = 3614
Score = 162 bits (349), Expect = 4e-039
Identities = 62/96 (64%), Positives = 78/96 (81%)
Frame = +1 / +1
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C L V + F + Q++N+AS+WF+SLF+ IFAT IL MRWSGVGID+WWRNEQFWV
Sbjct: 2776 YCTLLAVCLFTNQFIIPQISNIASIWFLSLFLSIFATGILEMRWSGVGIDEWWRNEQFWV 2955
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDD 387
IGGVS+HLFAVFQG+L V+AG+DT+ T TSK D+D
Sbjct: 2956 IGGVSAHLFAVFQGILKVLAGIDTNFTVTSKASDED 3063
Score = 107 bits (229), Expect = 1e-022
Identities = 47/71 (66%), Positives = 52/71 (73%)
Frame = -1 / -1
Query: 371 FDVXVXLVSTPAMTXRSP*NTAKRCEDTPPMTQNCSFLHQSSIPTPLHLIXRMLVAKMQI 192
F+V V VS PA T R P*NTA + DTPPMTQNCSFLH SS+PTPLHLI + VAKM+
Sbjct: 3047 FEVTVKFVSIPARTLRIP*NTANK*ADTPPMTQNCSFLHHSSMPTPLHLISSIPVAKMER 2868
Query: 191 KSDMNHRLATL 159
K D NH LA L
Sbjct: 2867 KRDRNHILAML 2835
>emb|AX030946.1| Sequence 9 from Patent WO9800549
Length = 3614
Score = 162 bits (349), Expect = 4e-039
Identities = 62/96 (64%), Positives = 78/96 (81%)
Frame = +1 / +1
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C L V + F + Q++N+AS+WF+SLF+ IFAT IL MRWSGVGID+WWRNEQFWV
Sbjct: 2776 YCTLLAVCLFTNQFIIPQISNIASIWFLSLFLSIFATGILEMRWSGVGIDEWWRNEQFWV 2955
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDD 387
IGGVS+HLFAVFQG+L V+AG+DT+ T TSK D+D
Sbjct: 2956 IGGVSAHLFAVFQGILKVLAGIDTNFTVTSKASDED 3063
Score = 107 bits (229), Expect = 1e-022
Identities = 47/71 (66%), Positives = 52/71 (73%)
Frame = -1 / -1
Query: 371 FDVXVXLVSTPAMTXRSP*NTAKRCEDTPPMTQNCSFLHQSSIPTPLHLIXRMLVAKMQI 192
F+V V VS PA T R P*NTA + DTPPMTQNCSFLH SS+PTPLHLI + VAKM+
Sbjct: 3047 FEVTVKFVSIPARTLRIP*NTANK*ADTPPMTQNCSFLHHSSMPTPLHLISSIPVAKMER 2868
Query: 191 KSDMNHRLATL 159
K D NH LA L
Sbjct: 2867 KRDRNHILAML 2835
>gb|AI994106.1|AI994106 701498975 A. thaliana, Ohio State clone set Arabidopsis thaliana
cDNA clone 701498975, mRNA sequence
Length = 534
Score = 161 bits (347), Expect = 8e-039
Identities = 62/96 (64%), Positives = 78/96 (81%)
Frame = +1 / +2
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C L V + F + Q++N+AS+WF+SLF+ IFAT IL MRWSGVGID+WWRNEQFWV
Sbjct: 32 YCTLPAVCLFTNQFIIPQISNIASIWFLSLFLSIFATGILEMRWSGVGIDEWWRNEQFWV 211
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDD 387
IGGVS+HLFAVFQG+L V+AG+DT+ T TSK D+D
Sbjct: 212 IGGVSAHLFAVFQGILKVLAGIDTNFTVTSKASDED 319
Score = 107 bits (229), Expect(2) = 1e-023
Identities = 47/71 (66%), Positives = 52/71 (73%)
Frame = -1 / -1
Query: 371 FDVXVXLVSTPAMTXRSP*NTAKRCEDTPPMTQNCSFLHQSSIPTPLHLIXRMLVAKMQI 192
F+V V VS PA T R P*NTA + DTPPMTQNCSFLH SS+PTPLHLI + VAKM+
Sbjct: 303 FEVTVKFVSIPARTLRIP*NTANK*ADTPPMTQNCSFLHHSSMPTPLHLISSIPVAKMER 124
Query: 191 KSDMNHRLATL 159
K D NH LA L
Sbjct: 123 KRDRNHILAML 91
Score = 22.6 bits (43), Expect(2) = 1e-023
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1 / -1
Query: 44 GVINFPVNKQMAGN 3
G+IN+ V +Q AGN
Sbjct: 81 GIINWLVKRQTAGN 40
>gb|BT002335.1| Arabidopsis thaliana clone C104938 putative cellulose synthase
catalytic subunit (At5g05170) mRNA, complete cds
Length = 3229
Score = 161 bits (347), Expect = 8e-039
Identities = 62/96 (64%), Positives = 78/96 (81%)
Frame = +1 / +1
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C L V + F + Q++N+AS+WF+SLF+ IFAT IL MRWSGVGID+WWRNEQFWV
Sbjct: 2560 YCTLPAVCLFTNQFIIPQISNIASIWFLSLFLSIFATGILEMRWSGVGIDEWWRNEQFWV 2739
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDD 387
IGGVS+HLFAVFQG+L V+AG+DT+ T TSK D+D
Sbjct: 2740 IGGVSAHLFAVFQGILKVLAGIDTNFTVTSKASDED 2847
Score = 107 bits (229), Expect(2) = 2e-023
Identities = 47/71 (66%), Positives = 52/71 (73%)
Frame = -1 / -3
Query: 371 FDVXVXLVSTPAMTXRSP*NTAKRCEDTPPMTQNCSFLHQSSIPTPLHLIXRMLVAKMQI 192
F+V V VS PA T R P*NTA + DTPPMTQNCSFLH SS+PTPLHLI + VAKM+
Sbjct: 2831 FEVTVKFVSIPARTLRIP*NTANK*ADTPPMTQNCSFLHHSSMPTPLHLISSIPVAKMER 2652
Query: 191 KSDMNHRLATL 159
K D NH LA L
Sbjct: 2651 KRDRNHILAML 2619
Score = 22.6 bits (43), Expect(2) = 2e-023
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1 / -3
Query: 44 GVINFPVNKQMAGN 3
G+IN+ V +Q AGN
Sbjct: 2609 GIINWLVKRQTAGN 2568
>ref|NM_120599.2| Arabidopsis thaliana CESA3 (CELLULASE SYNTHASE 3); cellulose
synthase/ transferase, transferring glycosyl groups
AT5G05170 (CESA3) mRNA, complete cds
Length = 3607
Score = 161 bits (347), Expect = 8e-039
Identities = 62/96 (64%), Positives = 78/96 (81%)
Frame = +1 / +3
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C L V + F + Q++N+AS+WF+SLF+ IFAT IL MRWSGVGID+WWRNEQFWV
Sbjct: 2742 YCTLPAVCLFTNQFIIPQISNIASIWFLSLFLSIFATGILEMRWSGVGIDEWWRNEQFWV 2921
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDD 387
IGGVS+HLFAVFQG+L V+AG+DT+ T TSK D+D
Sbjct: 2922 IGGVSAHLFAVFQGILKVLAGIDTNFTVTSKASDED 3029
Score = 107 bits (229), Expect(2) = 2e-023
Identities = 47/71 (66%), Positives = 52/71 (73%)
Frame = -1 / -1
Query: 371 FDVXVXLVSTPAMTXRSP*NTAKRCEDTPPMTQNCSFLHQSSIPTPLHLIXRMLVAKMQI 192
F+V V VS PA T R P*NTA + DTPPMTQNCSFLH SS+PTPLHLI + VAKM+
Sbjct: 3013 FEVTVKFVSIPARTLRIP*NTANK*ADTPPMTQNCSFLHHSSMPTPLHLISSIPVAKMER 2834
Query: 191 KSDMNHRLATL 159
K D NH LA L
Sbjct: 2833 KRDRNHILAML 2801
Score = 22.6 bits (43), Expect(2) = 2e-023
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1 / -1
Query: 44 GVINFPVNKQMAGN 3
G+IN+ V +Q AGN
Sbjct: 2791 GIINWLVKRQTAGN 2750
>emb|AL391142.1|ATT10B6 Arabidopsis thaliana DNA chromosome 5, BAC clone T10B6 (ESSA project)
Length = 33563
Score = 147 bits (315), Expect(2) = 4e-038
Identities = 55/85 (64%), Positives = 70/85 (82%)
Frame = +1 / -2
Query: 151 QLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGLLX 330
Q++ ASL+F+SLF+ I T IL +RWSGV I++WWRNEQFWVIGG+S+HLFAV QGLL
Sbjct: 21247 QISTFASLFFISLFMSIIVTGILELRWSGVSIEEWWRNEQFWVIGGISAHLFAVVQGLLK 21068
Query: 331 VIAGVDTSXTXTSKGGDDDEFSELY 405
++AG+DT+ T TSK DDD+F ELY
Sbjct: 21067 ILAGIDTNFTVTSKATDDDDFGELY 20993
Score = 32.2 bits (64), Expect(2) = 4e-038
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +1 / -3
Query: 4 LPAICLLTGKFITPEV 51
LPAICLLT KFI P V
Sbjct: 21369 LPAICLLTDKFIMPPV 21322
>gb|AF091713.1|AF091713 Arabidopsis thaliana cellulose synthase catalytic subunit (IRX3)
gene, complete cds
Length = 7234
Score = 147 bits (315), Expect(2) = 4e-038
Identities = 55/85 (64%), Positives = 70/85 (82%)
Frame = +1 / +3
Query: 151 QLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGLLX 330
Q++ ASL+F+SLF+ I T IL +RWSGV I++WWRNEQFWVIGG+S+HLFAV QGLL
Sbjct: 4056 QISTFASLFFISLFMSIIVTGILELRWSGVSIEEWWRNEQFWVIGGISAHLFAVVQGLLK 4235
Query: 331 VIAGVDTSXTXTSKGGDDDEFSELY 405
++AG+DT+ T TSK DDD+F ELY
Sbjct: 4236 ILAGIDTNFTVTSKATDDDDFGELY 4310
Score = 32.2 bits (64), Expect(2) = 4e-038
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +1 / +1
Query: 4 LPAICLLTGKFITPEV 51
LPAICLLT KFI P V
Sbjct: 3934 LPAICLLTDKFIMPPV 3981
>emb|AL161581.2|ATCHRIV77 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 77
Length = 197252
Score = 146 bits (313), Expect(2) = 2e-037
Identities = 56/81 (69%), Positives = 67/81 (82%)
Frame = +1 / -3
Query: 145 LLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGL 324
LLQ++N AS+WF+ LFI I T IL +RWSGV I+DWWRNEQFWVIGG S+HLFAVFQGL
Sbjct: 55614 LLQISNYASIWFILLFISIAVTGILELRWSGVSIEDWWRNEQFWVIGGTSAHLFAVFQGL 55435
Query: 325 LXVIAGVDTSXTXTSKGGDDD 387
L V+AG+DT+ T TSK D+D
Sbjct: 55434 LKVLAGIDTNFTVTSKATDED 55372
Score = 30.9 bits (61), Expect(2) = 2e-037
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1 / -2
Query: 4 LPAICLLTGKFITPEV 51
LPA CL+T +FI PEV
Sbjct: 55732 LPAFCLITDRFIIPEV 55685
>emb|AL034567.1|ATF8B4 Arabidopsis thaliana DNA chromosome 4, BAC clone F8B4 (ESSA project)
Length = 93257
Score = 146 bits (313), Expect(2) = 2e-037
Identities = 56/81 (69%), Positives = 67/81 (82%)
Frame = +1 / -1
Query: 145 LLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGL 324
LLQ++N AS+WF+ LFI I T IL +RWSGV I+DWWRNEQFWVIGG S+HLFAVFQGL
Sbjct: 41897 LLQISNYASIWFILLFISIAVTGILELRWSGVSIEDWWRNEQFWVIGGTSAHLFAVFQGL 41718
Query: 325 LXVIAGVDTSXTXTSKGGDDD 387
L V+AG+DT+ T TSK D+D
Sbjct: 41717 LKVLAGIDTNFTVTSKATDED 41655
Score = 30.9 bits (61), Expect(2) = 2e-037
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1 / -3
Query: 4 LPAICLLTGKFITPEV 51
LPA CL+T +FI PEV
Sbjct: 42015 LPAFCLITDRFIIPEV 41968
>dbj|BD022674.1| Manipulation of cellulose and/or beta-1,4-glucan
Length = 8411
Score = 146 bits (313), Expect(2) = 2e-037
Identities = 56/81 (69%), Positives = 67/81 (82%)
Frame = +1 / +2
Query: 145 LLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGL 324
LLQ++N AS+WF+ LFI I T IL +RWSGV I+DWWRNEQFWVIGG S+HLFAVFQGL
Sbjct: 7079 LLQISNYASIWFILLFISIAVTGILELRWSGVSIEDWWRNEQFWVIGGTSAHLFAVFQGL 7258
Query: 325 LXVIAGVDTSXTXTSKGGDDD 387
L V+AG+DT+ T TSK D+D
Sbjct: 7259 LKVLAGIDTNFTVTSKATDED 7321
Score = 30.9 bits (61), Expect(2) = 2e-037
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1 / +1
Query: 4 LPAICLLTGKFITPEV 51
LPA CL+T +FI PEV
Sbjct: 6961 LPAFCLITDRFIIPEV 7008
>emb|AX030940.1| Sequence 3 from Patent WO9800549
Length = 8411
Score = 146 bits (313), Expect(2) = 2e-037
Identities = 56/81 (69%), Positives = 67/81 (82%)
Frame = +1 / +2
Query: 145 LLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGL 324
LLQ++N AS+WF+ LFI I T IL +RWSGV I+DWWRNEQFWVIGG S+HLFAVFQGL
Sbjct: 7079 LLQISNYASIWFILLFISIAVTGILELRWSGVSIEDWWRNEQFWVIGGTSAHLFAVFQGL 7258
Query: 325 LXVIAGVDTSXTXTSKGGDDD 387
L V+AG+DT+ T TSK D+D
Sbjct: 7259 LKVLAGIDTNFTVTSKATDED 7321
Score = 30.9 bits (61), Expect(2) = 2e-037
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1 / +1
Query: 4 LPAICLLTGKFITPEV 51
LPA CL+T +FI PEV
Sbjct: 6961 LPAFCLITDRFIIPEV 7008
>gb|AF027172.1|AF027172 Arabidopsis thaliana cellulose synthase catalytic subunit (RSW1)
gene, complete cds
Length = 8401
Score = 146 bits (313), Expect(2) = 2e-037
Identities = 56/81 (69%), Positives = 67/81 (82%)
Frame = +1 / +1
Query: 145 LLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGL 324
LLQ++N AS+WF+ LFI I T IL +RWSGV I+DWWRNEQFWVIGG S+HLFAVFQGL
Sbjct: 7069 LLQISNYASIWFILLFISIAVTGILELRWSGVSIEDWWRNEQFWVIGGTSAHLFAVFQGL 7248
Query: 325 LXVIAGVDTSXTXTSKGGDDD 387
L V+AG+DT+ T TSK D+D
Sbjct: 7249 LKVLAGIDTNFTVTSKATDED 7311
Score = 30.9 bits (61), Expect(2) = 2e-037
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1 / +3
Query: 4 LPAICLLTGKFITPEV 51
LPA CL+T +FI PEV
Sbjct: 6951 LPAFCLITDRFIIPEV 6998
>dbj|AB006703.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MRH10
Length = 71522
Score = 145 bits (312), Expect(2) = 4e-037
Identities = 56/81 (69%), Positives = 69/81 (85%)
Frame = +1 / +3
Query: 145 LLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGL 324
L+Q+NN AS+WF++LF+ I AT+IL +RWSGV I+D WRNEQFWVIGGVS+HLFAVFQGL
Sbjct: 49062 LIQINNFASIWFLALFLSIIATAILELRWSGVSINDLWRNEQFWVIGGVSAHLFAVFQGL 49241
Query: 325 LXVIAGVDTSXTXTSKGGDDD 387
L V+ GVDT+ T TSKG D+
Sbjct: 49242 LKVLFGVDTNFTVTSKGASDE 49304
Score = 38.2 bits (77), Expect(2) = 4e-037
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +1 / +2
Query: 1 TLPAICLLTGKFITPEVKLNQL 66
T+PA+CLLTGKFI P V + L
Sbjct: 48650 TIPAVCLLTGKFIIPTVSAHDL 48715
>emb|AJ838254.1| Arabidopsis thaliana T-DNA flanking sequence, left border, clone
355C10
Length = 556
Score = 142 bits (305), Expect(2) = 2e-036
Identities = 54/81 (66%), Positives = 66/81 (81%)
Frame = +1 / +3
Query: 145 LLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGL 324
LLQ++N AS+WF+ LFI I T IL +RWSGV I+DWWRNEQFWVIGG S+HLFA FQGL
Sbjct: 267 LLQISNYASIWFILLFISIAVTGILELRWSGVSIEDWWRNEQFWVIGGTSAHLFAAFQGL 446
Query: 325 LXVIAGVDTSXTXTSKGGDDD 387
L V+AG+DT+ T TSK D++
Sbjct: 447 LKVLAGIDTNFTVTSKATDEE 509
Score = 30.9 bits (61), Expect(2) = 2e-036
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1 / +2
Query: 4 LPAICLLTGKFITPEV 51
LPA CL+T +FI PEV
Sbjct: 149 LPAFCLITDRFIIPEV 196
>gb|AV536569.1|AV536569 AV536569 Arabidopsis thaliana liquid-cultured seedlings Columbia
Arabidopsis thaliana cDNA clone pAZNII0292R 5', mRNA
sequence
Length = 396
Score = 152 bits (327), Expect = 5e-036
Identities = 63/103 (61%), Positives = 77/103 (74%)
Frame = +1 / +1
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C L + L F + +++N AS+ FM+LF I T IL M+W VGIDDWWRNEQFWV
Sbjct: 82 YCSLPAICLLTGKFIVPEISNYASILFMALFSSIAITGILEMQWGKVGIDDWWRNEQFWV 261
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDDEFSELYL 408
IGGVS+HLFA+FQGLL V+AGVDT+ T TSK DD EFS+LYL
Sbjct: 262 IGGVSAHLFALFQGLLKVLAGVDTNFTVTSKAADDGEFSDLYL 390
Score = 94.5 bits (200), Expect(2) = 1e-021
Identities = 43/69 (62%), Positives = 46/69 (66%)
Frame = -1 / -2
Query: 371 FDVXVXLVSTPAMTXRSP*NTAKRCEDTPPMTQNCSFLHQSSIPTPLHLIXRMLVAKMQI 192
FDV V LVSTPA T R P A RC +TPPMTQNCSFLHQSSIPT H I R+ V +
Sbjct: 353 FDVTVKLVSTPARTLRRPWKRANRCAETPPMTQNCSFLHQSSIPTLPHCISRIPVIAIDE 174
Query: 191 KSDMNHRLA 165
KS M LA
Sbjct: 173 KSAMKRILA 147
Score = 28.6 bits (56), Expect(2) = 1e-021
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -1 / -2
Query: 47 SGVINFPVNKQMAG 6
SG +NFPV +QMAG
Sbjct: 134 SGTMNFPVRRQMAG 93
>gb|AF062485.1|AF062485 Arabidopsis thaliana cellulose synthase mRNA, partial cds
Length = 3444
Score = 152 bits (327), Expect = 5e-036
Identities = 63/103 (61%), Positives = 77/103 (74%)
Frame = +1 / +2
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C L + L F + +++N AS+ FM+LF I T IL M+W VGIDDWWRNEQFWV
Sbjct: 2612 YCSLPAICLLTGKFIVPEISNYASILFMALFSSIAITGILEMQWGKVGIDDWWRNEQFWV 2791
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDDEFSELYL 408
IGGVS+HLFA+FQGLL V+AGVDT+ T TSK DD EFS+LYL
Sbjct: 2792 IGGVSAHLFALFQGLLKVLAGVDTNFTVTSKAADDGEFSDLYL 2920
Score = 94.5 bits (200), Expect(2) = 2e-021
Identities = 43/69 (62%), Positives = 46/69 (66%)
Frame = -1 / -1
Query: 371 FDVXVXLVSTPAMTXRSP*NTAKRCEDTPPMTQNCSFLHQSSIPTPLHLIXRMLVAKMQI 192
FDV V LVSTPA T R P A RC +TPPMTQNCSFLHQSSIPT H I R+ V +
Sbjct: 2883 FDVTVKLVSTPARTLRRPWKRANRCAETPPMTQNCSFLHQSSIPTLPHCISRIPVIAIDE 2704
Query: 191 KSDMNHRLA 165
KS M LA
Sbjct: 2703 KSAMKRILA 2677
Score = 28.6 bits (56), Expect(2) = 2e-021
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -1 / -1
Query: 47 SGVINFPVNKQMAG 6
SG +NFPV +QMAG
Sbjct: 2664 SGTMNFPVRRQMAG 2623
>gb|AF375439.1| Arabidopsis thaliana AT5g64740/MVP7_7 mRNA, complete cds
Length = 1492
Score = 152 bits (327), Expect = 5e-036
Identities = 63/103 (61%), Positives = 77/103 (74%)
Frame = +1 / +1
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C L + L F + +++N AS+ FM+LF I T IL M+W VGIDDWWRNEQFWV
Sbjct: 712 YCSLPAICLLTGKFIVPEISNYASILFMALFSSIAITGILEMQWGKVGIDDWWRNEQFWV 891
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDDEFSELYL 408
IGGVS+HLFA+FQGLL V+AGVDT+ T TSK DD EFS+LYL
Sbjct: 892 IGGVSAHLFALFQGLLKVLAGVDTNFTVTSKAADDGEFSDLYL 1020
Score = 94.5 bits (200), Expect(2) = 3e-021
Identities = 43/69 (62%), Positives = 46/69 (66%)
Frame = -1 / -3
Query: 371 FDVXVXLVSTPAMTXRSP*NTAKRCEDTPPMTQNCSFLHQSSIPTPLHLIXRMLVAKMQI 192
FDV V LVSTPA T R P A RC +TPPMTQNCSFLHQSSIPT H I R+ V +
Sbjct: 983 FDVTVKLVSTPARTLRRPWKRANRCAETPPMTQNCSFLHQSSIPTLPHCISRIPVIAIDE 804
Query: 191 KSDMNHRLA 165
KS M LA
Sbjct: 803 KSAMKRILA 777
Score = 28.6 bits (56), Expect(2) = 3e-021
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -1 / -3
Query: 47 SGVINFPVNKQMAG 6
SG +NFPV +QMAG
Sbjct: 764 SGTMNFPVRRQMAG 723
>emb|AX507835.1| Sequence 2530 from Patent WO0216655
Length = 3255
Score = 152 bits (327), Expect = 5e-036
Identities = 63/103 (61%), Positives = 77/103 (74%)
Frame = +1 / +1
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C L + L F + +++N AS+ FM+LF I T IL M+W VGIDDWWRNEQFWV
Sbjct: 2620 YCSLPAICLLTGKFIVPEISNYASILFMALFSSIAITGILEMQWGKVGIDDWWRNEQFWV 2799
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDDEFSELYL 408
IGGVS+HLFA+FQGLL V+AGVDT+ T TSK DD EFS+LYL
Sbjct: 2800 IGGVSAHLFALFQGLLKVLAGVDTNFTVTSKAADDGEFSDLYL 2928
Score = 94.5 bits (200), Expect(2) = 2e-021
Identities = 43/69 (62%), Positives = 46/69 (66%)
Frame = -1 / -2
Query: 371 FDVXVXLVSTPAMTXRSP*NTAKRCEDTPPMTQNCSFLHQSSIPTPLHLIXRMLVAKMQI 192
FDV V LVSTPA T R P A RC +TPPMTQNCSFLHQSSIPT H I R+ V +
Sbjct: 2891 FDVTVKLVSTPARTLRRPWKRANRCAETPPMTQNCSFLHQSSIPTLPHCISRIPVIAIDE 2712
Query: 191 KSDMNHRLA 165
KS M LA
Sbjct: 2711 KSAMKRILA 2685
Score = 28.6 bits (56), Expect(2) = 2e-021
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -1 / -2
Query: 47 SGVINFPVNKQMAG 6
SG +NFPV +QMAG
Sbjct: 2672 SGTMNFPVRRQMAG 2631
>gb|AY143957.1| Arabidopsis thaliana At5g64740/MVP7_7 mRNA, complete cds
Length = 1101
Score = 152 bits (327), Expect = 5e-036
Identities = 63/103 (61%), Positives = 77/103 (74%)
Frame = +1 / +1
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C L + L F + +++N AS+ FM+LF I T IL M+W VGIDDWWRNEQFWV
Sbjct: 466 YCSLPAICLLTGKFIVPEISNYASILFMALFSSIAITGILEMQWGKVGIDDWWRNEQFWV 645
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDDEFSELYL 408
IGGVS+HLFA+FQGLL V+AGVDT+ T TSK DD EFS+LYL
Sbjct: 646 IGGVSAHLFALFQGLLKVLAGVDTNFTVTSKAADDGEFSDLYL 774
Score = 94.5 bits (200), Expect(2) = 3e-021
Identities = 43/69 (62%), Positives = 46/69 (66%)
Frame = -1 / -2
Query: 371 FDVXVXLVSTPAMTXRSP*NTAKRCEDTPPMTQNCSFLHQSSIPTPLHLIXRMLVAKMQI 192
FDV V LVSTPA T R P A RC +TPPMTQNCSFLHQSSIPT H I R+ V +
Sbjct: 737 FDVTVKLVSTPARTLRRPWKRANRCAETPPMTQNCSFLHQSSIPTLPHCISRIPVIAIDE 558
Query: 191 KSDMNHRLA 165
KS M LA
Sbjct: 557 KSAMKRILA 531
Score = 28.6 bits (56), Expect(2) = 3e-021
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -1 / -2
Query: 47 SGVINFPVNKQMAG 6
SG +NFPV +QMAG
Sbjct: 518 SGTMNFPVRRQMAG 477
>ref|NM_125870.2| Arabidopsis thaliana CESA6 (CELLULASE SYNTHASE 6); transferase,
transferring glycosyl groups AT5G64740 (CESA6) mRNA,
complete cds
Length = 4105
Score = 152 bits (327), Expect = 5e-036
Identities = 63/103 (61%), Positives = 77/103 (74%)
Frame = +1 / +1
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C L + L F + +++N AS+ FM+LF I T IL M+W VGIDDWWRNEQFWV
Sbjct: 3109 YCSLPAICLLTGKFIVPEISNYASILFMALFSSIAITGILEMQWGKVGIDDWWRNEQFWV 3288
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDDEFSELYL 408
IGGVS+HLFA+FQGLL V+AGVDT+ T TSK DD EFS+LYL
Sbjct: 3289 IGGVSAHLFALFQGLLKVLAGVDTNFTVTSKAADDGEFSDLYL 3417
Score = 94.5 bits (200), Expect(2) = 2e-021
Identities = 43/69 (62%), Positives = 46/69 (66%)
Frame = -1 / -3
Query: 371 FDVXVXLVSTPAMTXRSP*NTAKRCEDTPPMTQNCSFLHQSSIPTPLHLIXRMLVAKMQI 192
FDV V LVSTPA T R P A RC +TPPMTQNCSFLHQSSIPT H I R+ V +
Sbjct: 3380 FDVTVKLVSTPARTLRRPWKRANRCAETPPMTQNCSFLHQSSIPTLPHCISRIPVIAIDE 3201
Query: 191 KSDMNHRLA 165
KS M LA
Sbjct: 3200 KSAMKRILA 3174
Score = 28.6 bits (56), Expect(2) = 2e-021
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -1 / -3
Query: 47 SGVINFPVNKQMAG 6
SG +NFPV +QMAG
Sbjct: 3161 SGTMNFPVRRQMAG 3120
>gb|AF027173.1|AF027173 Arabidopsis thaliana cellulose synthase catalytic subunit (Ath-A)
mRNA, complete cds
Length = 3771
Score = 150 bits (323), Expect = 2e-035
Identities = 62/103 (60%), Positives = 75/103 (72%)
Frame = +1 / +1
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C L V L F + +++N A + FM +FI I T IL M+W GVGIDDWWRNEQFWV
Sbjct: 2833 YCSLPAVCLLTGKFIVPEISNYAGILFMLMFISIAVTGILEMQWGGVGIDDWWRNEQFWV 3012
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDDEFSELYL 408
IGG SSHLFA+FQGLL V+AGV+T+ T TSK DD FSELY+
Sbjct: 3013 IGGASSHLFALFQGLLKVLAGVNTNFTVTSKAADDGAFSELYI 3141
>gb|AY059858.1| Arabidopsis thaliana cellulose synthase catalytic subunit (Ath-A)
(At4g39350; T22F8.250) mRNA, complete cds
Length = 1699
Score = 150 bits (323), Expect = 2e-035
Identities = 62/103 (60%), Positives = 75/103 (72%)
Frame = +1 / +2
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C L V L F + +++N A + FM +FI I T IL M+W GVGIDDWWRNEQFWV
Sbjct: 890 YCSLPAVCLLTGKFIVPEISNYAGILFMLMFISIAVTGILEMQWGGVGIDDWWRNEQFWV 1069
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDDEFSELYL 408
IGG SSHLFA+FQGLL V+AGV+T+ T TSK DD FSELY+
Sbjct: 1070 IGGASSHLFALFQGLLKVLAGVNTNFTVTSKAADDGAFSELYI 1198
>gb|AY093308.1| Arabidopsis thaliana cellulose synthase catalytic subunit (At4g39350)
mRNA, complete cds
Length = 1587
Score = 150 bits (323), Expect = 2e-035
Identities = 62/103 (60%), Positives = 75/103 (72%)
Frame = +1 / +1
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C L V L F + +++N A + FM +FI I T IL M+W GVGIDDWWRNEQFWV
Sbjct: 886 YCSLPAVCLLTGKFIVPEISNYAGILFMLMFISIAVTGILEMQWGGVGIDDWWRNEQFWV 1065
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDDEFSELYL 408
IGG SSHLFA+FQGLL V+AGV+T+ T TSK DD FSELY+
Sbjct: 1066 IGGASSHLFALFQGLLKVLAGVNTNFTVTSKAADDGAFSELYI 1194
>gb|AY136423.1| Arabidopsis thaliana cellulose synthase catalytic subunit
(At5g09870) mRNA, complete cds
Length = 1490
Score = 150 bits (323), Expect = 2e-035
Identities = 62/103 (60%), Positives = 77/103 (74%)
Frame = +1 / +1
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C L + L F + +++N AS+ FM+LF I T IL M+W VGIDDWWRNEQFWV
Sbjct: 565 YCSLPAICLLTGKFIVPEISNYASILFMALFGSIAVTGILEMQWGKVGIDDWWRNEQFWV 744
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDDEFSELYL 408
IGGVS+HLFA+FQGLL V+AGV+T+ T TSK DD EFSELY+
Sbjct: 745 IGGVSAHLFALFQGLLKVLAGVETNFTVTSKAADDGEFSELYI 873
>dbj|BD022677.1| Manipulation of cellulose and/or beta-1,4-glucan
Length = 3828
Score = 150 bits (323), Expect = 2e-035
Identities = 62/103 (60%), Positives = 75/103 (72%)
Frame = +1 / +2
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C L V L F + +++N A + FM +FI I T IL M+W GVGIDDWWRNEQFWV
Sbjct: 2855 YCSLPAVCLLTGKFIVPEISNYAGILFMLMFISIAVTGILEMQWGGVGIDDWWRNEQFWV 3034
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDDEFSELYL 408
IGG SSHLFA+FQGLL V+AGV+T+ T TSK DD FSELY+
Sbjct: 3035 IGGASSHLFALFQGLLKVLAGVNTNFTVTSKAADDGAFSELYI 3163
>emb|AX505864.1| Sequence 559 from Patent WO0216655
Length = 3255
Score = 150 bits (323), Expect = 2e-035
Identities = 62/103 (60%), Positives = 75/103 (72%)
Frame = +1 / +1
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C L V L F + +++N A + FM +FI I T IL M+W GVGIDDWWRNEQFWV
Sbjct: 2617 YCSLPAVCLLTGKFIVPEISNYAGILFMLMFISIAVTGILEMQWGGVGIDDWWRNEQFWV 2796
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDDEFSELYL 408
IGG SSHLFA+FQGLL V+AGV+T+ T TSK DD FSELY+
Sbjct: 2797 IGGASSHLFALFQGLLKVLAGVNTNFTVTSKAADDGAFSELYI 2925
>emb|AX030944.1| Sequence 7 from Patent WO9800549
Length = 3828
Score = 150 bits (323), Expect = 2e-035
Identities = 62/103 (60%), Positives = 75/103 (72%)
Frame = +1 / +2
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C L V L F + +++N A + FM +FI I T IL M+W GVGIDDWWRNEQFWV
Sbjct: 2855 YCSLPAVCLLTGKFIVPEISNYAGILFMLMFISIAVTGILEMQWGGVGIDDWWRNEQFWV 3034
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDDEFSELYL 408
IGG SSHLFA+FQGLL V+AGV+T+ T TSK DD FSELY+
Sbjct: 3035 IGGASSHLFALFQGLLKVLAGVNTNFTVTSKAADDGAFSELYI 3163
>gb|BT008832.1| Arabidopsis thaliana At5g09870 mRNA, complete cds
Length = 1041
Score = 150 bits (323), Expect = 2e-035
Identities = 62/103 (60%), Positives = 77/103 (74%)
Frame = +1 / +1
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C L + L F + +++N AS+ FM+LF I T IL M+W VGIDDWWRNEQFWV
Sbjct: 406 YCSLPAICLLTGKFIVPEISNYASILFMALFGSIAVTGILEMQWGKVGIDDWWRNEQFWV 585
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDDEFSELYL 408
IGGVS+HLFA+FQGLL V+AGV+T+ T TSK DD EFSELY+
Sbjct: 586 IGGVSAHLFALFQGLLKVLAGVETNFTVTSKAADDGEFSELYI 714
>ref|NM_121024.1| Arabidopsis thaliana CESA5 (CELLULASE SYNTHASE 5); transferase,
transferring glycosyl groups AT5G09870 (CESA5) mRNA,
complete cds
Length = 3210
Score = 150 bits (323), Expect = 2e-035
Identities = 62/103 (60%), Positives = 77/103 (74%)
Frame = +1 / +1
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C L + L F + +++N AS+ FM+LF I T IL M+W VGIDDWWRNEQFWV
Sbjct: 2575 YCSLPAICLLTGKFIVPEISNYASILFMALFGSIAVTGILEMQWGKVGIDDWWRNEQFWV 2754
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDDEFSELYL 408
IGGVS+HLFA+FQGLL V+AGV+T+ T TSK DD EFSELY+
Sbjct: 2755 IGGVSAHLFALFQGLLKVLAGVETNFTVTSKAADDGEFSELYI 2883
>ref|NM_120095.2| Arabidopsis thaliana CESA2; cellulose synthase/ transferase,
transferring glycosyl groups AT4G39350 (CESA2) mRNA,
complete cds
Length = 3726
Score = 150 bits (323), Expect = 2e-035
Identities = 62/103 (60%), Positives = 75/103 (72%)
Frame = +1 / +2
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C L V L F + +++N A + FM +FI I T IL M+W GVGIDDWWRNEQFWV
Sbjct: 2786 YCSLPAVCLLTGKFIVPEISNYAGILFMLMFISIAVTGILEMQWGGVGIDDWWRNEQFWV 2965
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDDEFSELYL 408
IGG SSHLFA+FQGLL V+AGV+T+ T TSK DD FSELY+
Sbjct: 2966 IGGASSHLFALFQGLLKVLAGVNTNFTVTSKAADDGAFSELYI 3094
>gb|AF088917.1|AF088917 Arabidopsis thaliana cellulose synthase catalytic subunit (IRX3)
mRNA, complete cds
Length = 3081
Score = 150 bits (322), Expect = 2e-035
Identities = 58/102 (56%), Positives = 77/102 (75%)
Frame = +1 / +1
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C+L + L F + ++ ASL+F+SLF+ I T IL +RWSGV I++WWRNEQFWV
Sbjct: 2446 YCILPAICLLTDKFIMPPISTFASLFFISLFMSIIVTGILELRWSGVSIEEWWRNEQFWV 2625
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDDEFSELY 405
IGG+S+HLFAV QGLL ++AG+DT+ T TSK DDD+F ELY
Sbjct: 2626 IGGISAHLFAVVQGLLKILAGIDTNFTVTSKATDDDDFGELY 2751
>gb|AY139754.1| Arabidopsis thaliana AT5g17420/T10B6_80 mRNA, complete cds
Length = 3355
Score = 150 bits (322), Expect = 2e-035
Identities = 58/102 (56%), Positives = 77/102 (75%)
Frame = +1 / +1
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C+L + L F + ++ ASL+F+SLF+ I T IL +RWSGV I++WWRNEQFWV
Sbjct: 2491 YCILPAICLLTDKFIMPPISTFASLFFISLFMSIIVTGILELRWSGVSIEEWWRNEQFWV 2670
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDDEFSELY 405
IGG+S+HLFAV QGLL ++AG+DT+ T TSK DDD+F ELY
Sbjct: 2671 IGGISAHLFAVVQGLLKILAGIDTNFTVTSKATDDDDFGELY 2796
>gb|BT004543.1| Arabidopsis thaliana AT5g17420/T10B6_80 gene, complete cds
Length = 3081
Score = 150 bits (322), Expect = 2e-035
Identities = 58/102 (56%), Positives = 77/102 (75%)
Frame = +1 / +1
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C+L + L F + ++ ASL+F+SLF+ I T IL +RWSGV I++WWRNEQFWV
Sbjct: 2446 YCILPAICLLTDKFIMPPISTFASLFFISLFMSIIVTGILELRWSGVSIEEWWRNEQFWV 2625
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDDEFSELY 405
IGG+S+HLFAV QGLL ++AG+DT+ T TSK DDD+F ELY
Sbjct: 2626 IGGISAHLFAVVQGLLKILAGIDTNFTVTSKATDDDDFGELY 2751
>ref|NM_121748.2| Arabidopsis thaliana IRX3 (IRREGULAR XYLEM 3); cellulose synthase
AT5G17420 (IRX3) mRNA, complete cds
Length = 3693
Score = 150 bits (322), Expect = 2e-035
Identities = 58/102 (56%), Positives = 77/102 (75%)
Frame = +1 / +1
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C+L + L F + ++ ASL+F+SLF+ I T IL +RWSGV I++WWRNEQFWV
Sbjct: 2491 YCILPAICLLTDKFIMPPISTFASLFFISLFMSIIVTGILELRWSGVSIEEWWRNEQFWV 2670
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDDEFSELY 405
IGG+S+HLFAV QGLL ++AG+DT+ T TSK DDD+F ELY
Sbjct: 2671 IGGISAHLFAVVQGLLKILAGIDTNFTVTSKATDDDDFGELY 2796
>dbj|AK220815.1| Arabidopsis thaliana mRNA for cellulose synthase catalytic subunit,
partial cds, clone: RAFL22-31-O12
Length = 930
Score = 148 bits (318), Expect = 8e-035
Identities = 57/102 (55%), Positives = 76/102 (74%)
Frame = +1 / +1
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C+L + L F + ++ ASL+F+SLF+ I T IL +RWSGV I++WWRNEQFWV
Sbjct: 121 YCILPAICLLTDKFIMPPISTFASLFFISLFMSIIVTGILELRWSGVSIEEWWRNEQFWV 300
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDDEFSELY 405
IGG+S+HLFAV QGLL ++ G+DT+ T TSK DDD+F ELY
Sbjct: 301 IGGISAHLFAVVQGLLKILTGIDTNFTVTSKATDDDDFGELY 426
>ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complete sequence
Length = 18585042
Score = 148 bits (317), Expect = 1e-034
Identities = 58/86 (67%), Positives = 68/86 (79%)
Frame = +1 / +1
Query: 151 QLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGLLX 330
Q++N A + FM +FI I T IL M+W GVGIDDWWRNEQFWVIGG SSHLFA+FQGLL
Sbjct: 18301297 QISNYAGILFMLMFISIAVTGILEMQWGGVGIDDWWRNEQFWVIGGASSHLFALFQGLLK 18301476
Query: 331 VIAGVDTSXTXTSKGGDDDEFSELYL 408
V+AGV+T+ T TSK DD FSELY+
Sbjct: 18301477 VLAGVNTNFTVTSKAADDGAFSELYI 18301554
Score = 147 bits (316), Expect = 1e-034
Identities = 59/88 (67%), Positives = 72/88 (81%)
Frame = +1 / -2
Query: 145 LLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGL 324
LLQL+N+AS+ F+ LFI I TS+L +RWSGV I+D WRNEQFWVIGGVS+HLFAVFQG
Sbjct: 10313453 LLQLSNLASMLFLGLFISIILTSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQGF 10313274
Query: 325 LXVIAGVDTSXTXTSKGGDDDEFSELYL 408
L ++AG+DT+ T TSK DD EF ELY+
Sbjct: 10313273 LKMLAGLDTNFTVTSKTADDLEFGELYI 10313190
Score = 146 bits (313), Expect = 4e-034
Identities = 56/81 (69%), Positives = 67/81 (82%)
Frame = +1 / -3
Query: 145 LLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGL 324
LLQ++N AS+WF+ LFI I T IL +RWSGV I+DWWRNEQFWVIGG S+HLFAVFQGL
Sbjct: 15641611 LLQISNYASIWFILLFISIAVTGILELRWSGVSIEDWWRNEQFWVIGGTSAHLFAVFQGL 15641432
Query: 325 LXVIAGVDTSXTXTSKGGDDD 387
L V+AG+DT+ T TSK D+D
Sbjct: 15641431 LKVLAGIDTNFTVTSKATDED 15641369
Score = 109 bits (232), Expect = 6e-023
Identities = 36/72 (50%), Positives = 56/72 (77%)
Frame = +1 / -2
Query: 172 LWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGLLXVIAGVDT 351
++ + + IC+ ++L ++WSG+G+++WWRNEQ+W+I G SSHL+AV QG+L VIAG++
Sbjct: 17910668 VYLLMITICLIGLAVLEVKWSGIGLEEWWRNEQWWLISGTSSHLYAVVQGVLKVIAGIEI 17910489
Query: 352 SXTXTSKGGDDD 387
S T T+K G DD
Sbjct: 17910488 SFTLTTKSGGDD 17910453
>gb|AQ967081.1|AQ967081 LERIP40TF LERG Arabidopsis thaliana genomic clone LERIP40, DNA
sequence
Length = 660
Score = 147 bits (316), Expect = 1e-034
Identities = 59/88 (67%), Positives = 72/88 (81%)
Frame = +1 / +3
Query: 145 LLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGL 324
LLQL+N+AS+ F+ LFI I TS+L +RWSGV I+D WRNEQFWVIGGVS+HLFAVFQG
Sbjct: 63 LLQLSNLASMLFLGLFISIILTSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQGF 242
Query: 325 LXVIAGVDTSXTXTSKGGDDDEFSELYL 408
L ++AG+DT+ T TSK DD EF ELY+
Sbjct: 243 LKMLAGLDTNFTVTSKTADDLEFGELYI 326
>gb|AQ967082.1|AQ967082 LERIP40TR LERG Arabidopsis thaliana genomic clone LERIP40, DNA
sequence
Length = 645
Score = 147 bits (316), Expect = 1e-034
Identities = 59/88 (67%), Positives = 72/88 (81%)
Frame = +1 / -2
Query: 145 LLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGL 324
LLQL+N+AS+ F+ LFI I TS+L +RWSGV I+D WRNEQFWVIGGVS+HLFAVFQG
Sbjct: 593 LLQLSNLASMLFLGLFISIILTSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQGF 414
Query: 325 LXVIAGVDTSXTXTSKGGDDDEFSELYL 408
L ++AG+DT+ T TSK DD EF ELY+
Sbjct: 413 LKMLAGLDTNFTVTSKTADDLEFGELYI 330
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 843,415,616
Number of Sequences: 1013581
Number of extensions: 11464235
Number of successful extensions: 259432
Number of sequences better than 1.0e-020: 132
length of database: 302,980,290
effective HSP length: 54
effective length of database: 248,246,916
effective search space used: 21597481692
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)