TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAF31c07.yg.2.1
(352 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|NM_111689.3| Arabidopsis thaliana KOB1 (KOBITO) AT3G085... 87 1e-033
emb|BX824982.1|CNS0A5MB Arabidopsis thaliana Full-length cD... 87 1e-033
gb|AF543710.1| Arabidopsis thaliana elongation defective 1 ... 87 1e-033
emb|BX842164.1|CNS09YB9 Arabidopsis thaliana Full-length cD... 87 5e-033
gb|AV548752.1|AV548752 AV548752 Arabidopsis thaliana roots ... 77 5e-030
ref|NM_129708.1| Arabidopsis thaliana N-acetyltransferase A... 79 7e-030
gb|AY735623.1| Arabidopsis thaliana hypothetical protein AT... 82 9e-030
ref|NM_115580.3| Arabidopsis thaliana unknown protein AT3G5... 82 9e-030
gb|AY954853.1| Arabidopsis thaliana hypothetical protein (A... 82 9e-030
gb|AC012562.5|AC012562 Arabidopsis thaliana chromosome 3 BA... 87 2e-025
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 87 4e-023
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 87 4e-023
gb|AC004625.3| Arabidopsis thaliana chromosome 2 clone T26J... 79 6e-023
emb|AL137080.2|ATF28O9 Arabidopsis thaliana DNA chromosome ... 82 6e-023
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 79 2e-020
gb|B26115.1|B26115 T9E5TF TAMU Arabidopsis thaliana genomic... 71 2e-011
emb|AL771508.1| Arabidopsis thaliana T-DNA flanking sequenc... 62 5e-009
gb|BZ384988.1|BZ384988 SALK_136286.43.20.x Arabidopsis thal... 44 0.002
emb|AJ599876.1| Arabidopsis thaliana T-DNA flanking sequenc... 38 0.10
gb|BE521947.1|BE521947 M22F3XTM Arabidopsis developing seed... 38 0.10
gb|AU226191.1|AU226191 AU226191 RAFL14 Arabidopsis thaliana... 38 0.10
gb|BP565961.1|BP565961 BP565961 RAFL14 Arabidopsis thaliana... 38 0.10
gb|BP567430.1|BP567430 BP567430 RAFL14 Arabidopsis thaliana... 38 0.10
gb|BP569063.1|BP569063 BP569063 RAFL14 Arabidopsis thaliana... 38 0.10
gb|BP578994.1|BP578994 BP578994 RAFL14 Arabidopsis thaliana... 38 0.10
gb|BP579629.1|BP579629 BP579629 RAFL14 Arabidopsis thaliana... 38 0.10
gb|BP627245.1|BP627245 BP627245 RAFL17 Arabidopsis thaliana... 38 0.10
gb|AF218796.1|AF218796 Arabidopsis thaliana heat shock prot... 38 0.10
emb|AJ520877.1|ATH520877 Arabidopsis thaliana T-DNA flankin... 38 0.10
gb|AY087050.1| Arabidopsis thaliana clone 31039 mRNA, compl... 38 0.10
gb|BT009662.1| Arabidopsis thaliana At1g74300 gene, complet... 38 0.10
gb|AC020579.5|AC020579 Arabidopsis thaliana chromosome 1 BA... 38 0.10
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 38 0.10
ref|NM_106090.2| Arabidopsis thaliana catalytic AT1G74300 m... 38 0.10
ref|NM_106091.2| Arabidopsis thaliana ATHSP101 (HEAT SHOCK ... 38 0.10
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 38 0.10
gb|BP568681.1|BP568681 BP568681 RAFL14 Arabidopsis thaliana... 35 1.3
gb|B67945.1|B67945 T25D10TR TAMU Arabidopsis thaliana genom... 34 1.8
gb|AV810278.1|AV810278 AV810278 RAFL9 Arabidopsis thaliana ... 34 1.8
gb|AY065282.1| Arabidopsis thaliana unknown protein (At3g48... 34 1.8
emb|BX823905.1|CNS0A6MQ Arabidopsis thaliana Full-length cD... 34 1.8
emb|AL049659.2|ATT29H11 Arabidopsis thaliana DNA chromosome... 34 1.8
ref|NM_114700.2| Arabidopsis thaliana catalytic/ hydrolase ... 34 1.8
emb|BX825580.1|CNS0A4U7 Arabidopsis thaliana Full-length cD... 34 2.4
gb|Z25707.1|Z25707 ATTS1172 Versailles-VC Arabidopsis thali... 32 8.6
gb|AA650747.1|AA650747 30861 Lambda-PRL2 Arabidopsis thalia... 32 8.6
gb|AA713284.1|AA713284 32844 Lambda-PRL2 Arabidopsis thalia... 32 8.6
gb|T44324.1|T44324 7587 Lambda-PRL2 Arabidopsis thaliana cD... 32 8.6
gb|AU226608.1|AU226608 AU226608 RAFL14 Arabidopsis thaliana... 32 8.6
gb|CF652146.1|CF652146 37-L020135-066-001-I09-SP6P MPIZ-ADI... 32 8.6
gb|CF652147.1|CF652147 37-L020135w-066-001-I09-SP6P MPIZ-AD... 32 8.6
gb|AV439563.1|AV439563 AV439563 Arabidopsis thaliana above-... 32 8.6
gb|AV539389.1|AV539389 AV539389 Arabidopsis thaliana roots ... 32 8.6
gb|BP563711.1|BP563711 BP563711 RAFL14 Arabidopsis thaliana... 32 8.6
gb|BP628262.1|BP628262 BP628262 RAFL17 Arabidopsis thaliana... 32 8.6
gb|BP634433.1|BP634433 BP634433 RAFL17 Arabidopsis thaliana... 32 8.6
gb|BT004617.1| Arabidopsis thaliana At2g36290 gene, complet... 32 8.6
gb|AY089174.1| Arabidopsis thaliana clone 5167 mRNA, comple... 32 8.6
gb|AC006921.6| Arabidopsis thaliana chromosome 2 clone F2H1... 32 8.6
emb|BX820927.1|CNS0A9MX Arabidopsis thaliana Full-length cD... 32 8.6
ref|NM_129186.2| Arabidopsis thaliana catalytic/ hydrolase ... 32 8.6
gb|BP858562.1|BP858562 BP858562 RAFL21 Arabidopsis thaliana... 25 8.7
>ref|NM_111689.3| Arabidopsis thaliana KOB1 (KOBITO) AT3G08550 (KOB1) mRNA, complete
cds
Length = 1991
Score = 86.8 bits (183), Expect(2) = 1e-033
Identities = 35/49 (71%), Positives = 41/49 (83%)
Frame = +3 / +2
Query: 3 ICITGSTSAGLHQILPWLYYHNVIGVSHFFLLVEGEAAKPAXTSVLESI 149
ICIT STSAGL QILPW++YH V+GVS FFL VEG+AA P+ + VLESI
Sbjct: 473 ICITTSTSAGLDQILPWMFYHKVLGVSTFFLFVEGKAATPSISKVLESI 619
Score = 77.1 bits (162), Expect(2) = 1e-033
Identities = 34/61 (55%), Positives = 36/61 (59%)
Frame = +1 / +2
Query: 151 SRIWNETXXAGXFYKPXXYELXXXQXLNMEMXIIMXRDARMDXIXXXXTDXXIXXXXXRE 330
SRIWNET + FYKP YEL Q LNMEM I+M RDA MD I TD I RE
Sbjct: 674 SRIWNETWLSSFFYKPCNYELFVKQSLNMEMAIVMARDAGMDWILHLDTDELIYPAGARE 853
Query: 331 Y 333
Y
Sbjct: 854 Y 856
Score = 56.5 bits (117), Expect(2) = 6e-015
Identities = 30/49 (61%), Positives = 30/49 (61%)
Frame = -1 / -3
Query: 148 IDSRTEVXAGFAASPSTNRKKCETPMTL**YNHGRIWCRPADVLPVIQI 2
IDS T G AA PST RK ETP TL * HGRI PADVL VI I
Sbjct: 618 IDSSTLEILGVAAFPSTKRKNVETPRTLW*NIHGRI*SNPADVLVVIHI 472
Score = 44.6 bits (91), Expect(2) = 6e-015
Identities = 26/61 (42%), Positives = 30/61 (49%)
Frame = -3 / -3
Query: 332 YSRXXXXXXXSSVXXXMXXSILASLXIIXXISMFXXCXXXSS*XXGL*XXPAXQVSFQMR 153
YSR SSV S+ ASL + ISM C +S* GL* QVSFQ+R
Sbjct: 855 YSRAPAGYISSSVSR*SIQSMPASLAMTIAISMLRDCLTNNS*LQGL*KKDESQVSFQIR 676
Query: 152 L 150
L
Sbjct: 675 L 673
Score = 42.3 bits (86), Expect(2) = 2e-008
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = -2 / -2
Query: 276 IHSSIPXHNNXHFHV*XLLXXXFVXXXLVKXTCXXSLIPNAA 151
IH+ IP H+N HFHV L + L+K LIPN A
Sbjct: 799 IHARIPSHDNSHFHVERLFDK*LIIAGLIKERRKPGLIPNPA 674
Score = 36.3 bits (73), Expect(2) = 2e-008
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = -3 / -2
Query: 149 NRFKNRGXSWLCSLSFN**KEM*NTNDIVIIQPWKNLV*ASRCASRDT 6
NR ++ + S FN +E *+ ++++ PW NL+ +S CASRDT
Sbjct: 619 NRLEHFRNTRSSSFPFNEKEEC*DA*NLMVEHPW*NLIQSS*CASRDT 476
Score = 35.4 bits (71), Expect(2) = 1e-004
Identities = 20/61 (32%), Positives = 25/61 (40%)
Frame = +2 / +3
Query: 152 AAFGMRLXXQVXFTSXXITNXXXSXX*TWKXXLLXXGMLEWIXSXXXILMXXFXXXXXES 331
A FGMR ++ F S I + + TWK L GM WI LM + S
Sbjct: 675 AGFGMRPGFRLSFISPAIMSYLSNNLSTWKWLLSWLGMRAWIGYFILTLMS*YTQQVLVS 854
Query: 332 T 334
T
Sbjct: 855 T 857
Score = 31.8 bits (63), Expect(2) = 0.085
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1 / +3
Query: 1 RSVSREAHLLAYTRFFHGC 57
R VSR AH L + RF+HGC
Sbjct: 471 RYVSRLAHQLDWIRFYHGC 527
Score = 30.4 bits (60), Expect(2) = 1e-004
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = +2 / +1
Query: 2 DLYHGKHICWPTPDSSMVVLSQCHWCFTFLSIS*RRGCKASXXLCS*IYS 151
D+YH HI W DS+M VL L *R C + + +YS
Sbjct: 472 DMYHD*HISWIGSDSTMDVLP*GSRRLNILPFR*RESCYSEYF*SARVYS 621
Score = 26.3 bits (51), Expect(2) = 0.085
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +3 / +1
Query: 144 SIQPHLE*DLXSRXXLQAXXLRTXXXAXXKHGNXXYYXXGC*NG 275
S +P LE*DL L A L +HGN + GC +G
Sbjct: 667 SEEPDLE*DLAFVFLL*ALQL*VICQTISQHGNGYCHG*GCGHG 798
>emb|BX824982.1|CNS0A5MB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH87ZB12 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1752
Score = 86.8 bits (183), Expect(2) = 1e-033
Identities = 35/49 (71%), Positives = 41/49 (83%)
Frame = +3 / +2
Query: 3 ICITGSTSAGLHQILPWLYYHNVIGVSHFFLLVEGEAAKPAXTSVLESI 149
ICIT STSAGL QILPW++YH V+GVS FFL VEG+AA P+ + VLESI
Sbjct: 347 ICITTSTSAGLDQILPWMFYHKVLGVSTFFLFVEGKAATPSISKVLESI 493
Score = 77.1 bits (162), Expect(2) = 1e-033
Identities = 34/61 (55%), Positives = 36/61 (59%)
Frame = +1 / +2
Query: 151 SRIWNETXXAGXFYKPXXYELXXXQXLNMEMXIIMXRDARMDXIXXXXTDXXIXXXXXRE 330
SRIWNET + FYKP YEL Q LNMEM I+M RDA MD I TD I RE
Sbjct: 548 SRIWNETWLSSFFYKPCNYELFVKQSLNMEMAIVMARDAGMDWILHLDTDELIYPAGARE 727
Query: 331 Y 333
Y
Sbjct: 728 Y 730
Score = 56.5 bits (117), Expect(2) = 6e-015
Identities = 30/49 (61%), Positives = 30/49 (61%)
Frame = -1 / -1
Query: 148 IDSRTEVXAGFAASPSTNRKKCETPMTL**YNHGRIWCRPADVLPVIQI 2
IDS T G AA PST RK ETP TL * HGRI PADVL VI I
Sbjct: 492 IDSSTLEILGVAAFPSTKRKNVETPRTLW*NIHGRI*SNPADVLVVIHI 346
Score = 44.6 bits (91), Expect(2) = 6e-015
Identities = 26/61 (42%), Positives = 30/61 (49%)
Frame = -3 / -1
Query: 332 YSRXXXXXXXSSVXXXMXXSILASLXIIXXISMFXXCXXXSS*XXGL*XXPAXQVSFQMR 153
YSR SSV S+ ASL + ISM C +S* GL* QVSFQ+R
Sbjct: 729 YSRAPAGYISSSVSR*SIQSMPASLAMTIAISMLRDCLTNNS*LQGL*KKDESQVSFQIR 550
Query: 152 L 150
L
Sbjct: 549 L 547
Score = 42.3 bits (86), Expect(2) = 2e-008
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = -2 / -3
Query: 276 IHSSIPXHNNXHFHV*XLLXXXFVXXXLVKXTCXXSLIPNAA 151
IH+ IP H+N HFHV L + L+K LIPN A
Sbjct: 673 IHARIPSHDNSHFHVERLFDK*LIIAGLIKERRKPGLIPNPA 548
Score = 36.3 bits (73), Expect(2) = 2e-008
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = -3 / -3
Query: 149 NRFKNRGXSWLCSLSFN**KEM*NTNDIVIIQPWKNLV*ASRCASRDT 6
NR ++ + S FN +E *+ ++++ PW NL+ +S CASRDT
Sbjct: 493 NRLEHFRNTRSSSFPFNEKEEC*DA*NLMVEHPW*NLIQSS*CASRDT 350
Score = 35.4 bits (71), Expect(2) = 1e-004
Identities = 20/61 (32%), Positives = 25/61 (40%)
Frame = +2 / +3
Query: 152 AAFGMRLXXQVXFTSXXITNXXXSXX*TWKXXLLXXGMLEWIXSXXXILMXXFXXXXXES 331
A FGMR ++ F S I + + TWK L GM WI LM + S
Sbjct: 549 AGFGMRPGFRLSFISPAIMSYLSNNLSTWKWLLSWLGMRAWIGYFILTLMS*YTQQVLVS 728
Query: 332 T 334
T
Sbjct: 729 T 731
Score = 31.8 bits (63), Expect(2) = 0.076
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1 / +3
Query: 1 RSVSREAHLLAYTRFFHGC 57
R VSR AH L + RF+HGC
Sbjct: 345 RYVSRLAHQLDWIRFYHGC 401
Score = 30.4 bits (60), Expect(2) = 1e-004
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = +2 / +1
Query: 2 DLYHGKHICWPTPDSSMVVLSQCHWCFTFLSIS*RRGCKASXXLCS*IYS 151
D+YH HI W DS+M VL L *R C + + +YS
Sbjct: 346 DMYHD*HISWIGSDSTMDVLP*GSRRLNILPFR*RESCYSEYF*SARVYS 495
Score = 26.3 bits (51), Expect(2) = 0.076
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +3 / +1
Query: 144 SIQPHLE*DLXSRXXLQAXXLRTXXXAXXKHGNXXYYXXGC*NG 275
S +P LE*DL L A L +HGN + GC +G
Sbjct: 541 SEEPDLE*DLAFVFLL*ALQL*VICQTISQHGNGYCHG*GCGHG 672
>gb|AF543710.1| Arabidopsis thaliana elongation defective 1 (ELD1) mRNA, complete
cds
Length = 1626
Score = 86.8 bits (183), Expect(2) = 1e-033
Identities = 35/49 (71%), Positives = 41/49 (83%)
Frame = +3 / +1
Query: 3 ICITGSTSAGLHQILPWLYYHNVIGVSHFFLLVEGEAAKPAXTSVLESI 149
ICIT STSAGL QILPW++YH V+GVS FFL VEG+AA P+ + VLESI
Sbjct: 400 ICITTSTSAGLDQILPWMFYHKVLGVSTFFLFVEGKAATPSISKVLESI 546
Score = 77.1 bits (162), Expect(2) = 1e-033
Identities = 34/61 (55%), Positives = 36/61 (59%)
Frame = +1 / +1
Query: 151 SRIWNETXXAGXFYKPXXYELXXXQXLNMEMXIIMXRDARMDXIXXXXTDXXIXXXXXRE 330
SRIWNET + FYKP YEL Q LNMEM I+M RDA MD I TD I RE
Sbjct: 601 SRIWNETWLSSFFYKPCNYELFVKQSLNMEMAIVMARDAGMDWILHLDTDELIYPAGARE 780
Query: 331 Y 333
Y
Sbjct: 781 Y 783
Score = 56.5 bits (117), Expect(2) = 6e-015
Identities = 30/49 (61%), Positives = 30/49 (61%)
Frame = -1 / -2
Query: 148 IDSRTEVXAGFAASPSTNRKKCETPMTL**YNHGRIWCRPADVLPVIQI 2
IDS T G AA PST RK ETP TL * HGRI PADVL VI I
Sbjct: 545 IDSSTLEILGVAAFPSTKRKNVETPRTLW*NIHGRI*SNPADVLVVIHI 399
Score = 44.6 bits (91), Expect(2) = 6e-015
Identities = 26/61 (42%), Positives = 30/61 (49%)
Frame = -3 / -2
Query: 332 YSRXXXXXXXSSVXXXMXXSILASLXIIXXISMFXXCXXXSS*XXGL*XXPAXQVSFQMR 153
YSR SSV S+ ASL + ISM C +S* GL* QVSFQ+R
Sbjct: 782 YSRAPAGYISSSVSR*SIQSMPASLAMTIAISMLRDCLTNNS*LQGL*KKDESQVSFQIR 603
Query: 152 L 150
L
Sbjct: 602 L 600
Score = 42.3 bits (86), Expect(2) = 2e-008
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = -2 / -1
Query: 276 IHSSIPXHNNXHFHV*XLLXXXFVXXXLVKXTCXXSLIPNAA 151
IH+ IP H+N HFHV L + L+K LIPN A
Sbjct: 726 IHARIPSHDNSHFHVERLFDK*LIIAGLIKERRKPGLIPNPA 601
Score = 36.3 bits (73), Expect(2) = 2e-008
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = -3 / -1
Query: 149 NRFKNRGXSWLCSLSFN**KEM*NTNDIVIIQPWKNLV*ASRCASRDT 6
NR ++ + S FN +E *+ ++++ PW NL+ +S CASRDT
Sbjct: 546 NRLEHFRNTRSSSFPFNEKEEC*DA*NLMVEHPW*NLIQSS*CASRDT 403
Score = 35.4 bits (71), Expect(2) = 1e-004
Identities = 20/61 (32%), Positives = 25/61 (40%)
Frame = +2 / +2
Query: 152 AAFGMRLXXQVXFTSXXITNXXXSXX*TWKXXLLXXGMLEWIXSXXXILMXXFXXXXXES 331
A FGMR ++ F S I + + TWK L GM WI LM + S
Sbjct: 602 AGFGMRPGFRLSFISPAIMSYLSNNLSTWKWLLSWLGMRAWIGYFILTLMS*YTQQVLVS 781
Query: 332 T 334
T
Sbjct: 782 T 784
Score = 31.8 bits (63), Expect(2) = 0.071
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1 / +2
Query: 1 RSVSREAHLLAYTRFFHGC 57
R VSR AH L + RF+HGC
Sbjct: 398 RYVSRLAHQLDWIRFYHGC 454
Score = 30.4 bits (60), Expect(2) = 1e-004
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = +2 / +3
Query: 2 DLYHGKHICWPTPDSSMVVLSQCHWCFTFLSIS*RRGCKASXXLCS*IYS 151
D+YH HI W DS+M VL L *R C + + +YS
Sbjct: 399 DMYHD*HISWIGSDSTMDVLP*GSRRLNILPFR*RESCYSEYF*SARVYS 548
Score = 26.3 bits (51), Expect(2) = 0.071
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +3 / +3
Query: 144 SIQPHLE*DLXSRXXLQAXXLRTXXXAXXKHGNXXYYXXGC*NG 275
S +P LE*DL L A L +HGN + GC +G
Sbjct: 594 SEEPDLE*DLAFVFLL*ALQL*VICQTISQHGNGYCHG*GCGHG 725
>emb|BX842164.1|CNS09YB9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH76ZA05 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1983
Score = 86.8 bits (183), Expect(2) = 5e-033
Identities = 35/49 (71%), Positives = 41/49 (83%)
Frame = +3 / +3
Query: 3 ICITGSTSAGLHQILPWLYYHNVIGVSHFFLLVEGEAAKPAXTSVLESI 149
ICIT STSAGL QILPW++YH V+GVS FFL VEG+AA P+ + VLESI
Sbjct: 495 ICITTSTSAGLDQILPWMFYHKVLGVSTFFLFVEGKAATPSISKVLESI 641
Score = 75.3 bits (158), Expect(2) = 5e-033
Identities = 33/61 (54%), Positives = 36/61 (59%)
Frame = +1 / +3
Query: 151 SRIWNETXXAGXFYKPXXYELXXXQXLNMEMXIIMXRDARMDXIXXXXTDXXIXXXXXRE 330
SRIWNET + FYKP Y+L Q LNMEM I+M RDA MD I TD I RE
Sbjct: 696 SRIWNETWLSSFFYKPCNYKLFVKQSLNMEMAIVMARDAGMDWILHLDTDELIYPAGARE 875
Query: 331 Y 333
Y
Sbjct: 876 Y 878
Score = 56.5 bits (117), Expect(2) = 3e-014
Identities = 30/49 (61%), Positives = 30/49 (61%)
Frame = -1 / -3
Query: 148 IDSRTEVXAGFAASPSTNRKKCETPMTL**YNHGRIWCRPADVLPVIQI 2
IDS T G AA PST RK ETP TL * HGRI PADVL VI I
Sbjct: 640 IDSSTLEILGVAAFPSTKRKNVETPRTLW*NIHGRI*SNPADVLVVIHI 494
Score = 42.3 bits (86), Expect(2) = 3e-014
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = -2 / -2
Query: 276 IHSSIPXHNNXHFHV*XLLXXXFVXXXLVKXTCXXSLIPNAA 151
IH+ IP H+N HFHV L + L+K LIPN A
Sbjct: 821 IHARIPSHDNSHFHVERLFDK*LIIAGLIKERRKPGLIPNPA 696
Score = 41.8 bits (85), Expect(2) = 3e-008
Identities = 25/61 (40%), Positives = 29/61 (47%)
Frame = -3 / -3
Query: 332 YSRXXXXXXXSSVXXXMXXSILASLXIIXXISMFXXCXXXSS*XXGL*XXPAXQVSFQMR 153
YSR SSV S+ ASL + ISM C + * GL* QVSFQ+R
Sbjct: 877 YSRAPAGYISSSVSR*SIQSMPASLAMTIAISMLRDCLTNNL*LQGL*KKDESQVSFQIR 698
Query: 152 L 150
L
Sbjct: 697 L 695
Score = 36.3 bits (73), Expect(2) = 3e-008
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = -3 / -2
Query: 149 NRFKNRGXSWLCSLSFN**KEM*NTNDIVIIQPWKNLV*ASRCASRDT 6
NR ++ + S FN +E *+ ++++ PW NL+ +S CASRDT
Sbjct: 641 NRLEHFRNTRSSSFPFNEKEEC*DA*NLMVEHPW*NLIQSS*CASRDT 498
Score = 35.4 bits (71), Expect(2) = 1e-004
Identities = 20/61 (32%), Positives = 25/61 (40%)
Frame = +2 / +1
Query: 152 AAFGMRLXXQVXFTSXXITNXXXSXX*TWKXXLLXXGMLEWIXSXXXILMXXFXXXXXES 331
A FGMR ++ F S I + + TWK L GM WI LM + S
Sbjct: 697 AGFGMRPGFRLSFISPAIISYLSNNLSTWKWLLSWLGMRAWIGYFILTLMS*YTQQVLVS 876
Query: 332 T 334
T
Sbjct: 877 T 879
Score = 31.8 bits (63), Expect(2) = 0.085
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1 / +1
Query: 1 RSVSREAHLLAYTRFFHGC 57
R VSR AH L + RF+HGC
Sbjct: 493 RYVSRLAHQLDWIRFYHGC 549
Score = 30.4 bits (60), Expect(2) = 1e-004
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = +2 / +2
Query: 2 DLYHGKHICWPTPDSSMVVLSQCHWCFTFLSIS*RRGCKASXXLCS*IYS 151
D+YH HI W DS+M VL L *R C + + +YS
Sbjct: 494 DMYHD*HISWIGSDSTMDVLP*GSRRLNILPFR*RESCYSEYF*SARVYS 643
Score = 26.3 bits (51), Expect(2) = 0.085
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +3 / +2
Query: 144 SIQPHLE*DLXSRXXLQAXXLRTXXXAXXKHGNXXYYXXGC*NG 275
S +P LE*DL L A L +HGN + GC +G
Sbjct: 689 SEEPDLE*DLAFVFLL*ALQL*VICQTISQHGNGYCHG*GCGHG 820
>gb|AV548752.1|AV548752 AV548752 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZL61b09F 3', mRNA sequence
Length = 419
Score = 77.1 bits (162), Expect(2) = 5e-030
Identities = 34/61 (55%), Positives = 36/61 (59%)
Frame = +1 / +1
Query: 151 SRIWNETXXAGXFYKPXXYELXXXQXLNMEMXIIMXRDARMDXIXXXXTDXXIXXXXXRE 330
SRIWNET + FYKP YEL Q LNMEM I+M RDA MD I TD I RE
Sbjct: 193 SRIWNETWLSSFFYKPCNYELFVKQSLNMEMAIVMARDAGMDWILHLDTDELIYPAGARE 372
Query: 331 Y 333
Y
Sbjct: 373 Y 375
Score = 73.5 bits (154), Expect(2) = 5e-030
Identities = 29/42 (69%), Positives = 35/42 (83%)
Frame = +3 / +1
Query: 24 SAGLHQILPWLYYHNVIGVSHFFLLVEGEAAKPAXTSVLESI 149
SAGL QILPW++YH V+GVS FFL VEG+AA P+ + VLESI
Sbjct: 13 SAGLDQILPWMFYHKVLGVSTFFLFVEGKAATPSISKVLESI 138
Score = 44.6 bits (91), Expect(2) = 3e-011
Identities = 26/61 (42%), Positives = 30/61 (49%)
Frame = -3 / -1
Query: 332 YSRXXXXXXXSSVXXXMXXSILASLXIIXXISMFXXCXXXSS*XXGL*XXPAXQVSFQMR 153
YSR SSV S+ ASL + ISM C +S* GL* QVSFQ+R
Sbjct: 374 YSRAPAGYISSSVSR*SIQSMPASLAMTIAISMLRDCLTNNS*LQGL*KKDESQVSFQIR 195
Query: 152 L 150
L
Sbjct: 194 L 192
Score = 42.8 bits (87), Expect(2) = 3e-011
Identities = 23/42 (54%), Positives = 24/42 (57%)
Frame = -1 / -1
Query: 148 IDSRTEVXAGFAASPSTNRKKCETPMTL**YNHGRIWCRPAD 23
IDS T G AA PST RK ETP TL * GRI PA+
Sbjct: 137 IDSSTLEILGVAAFPSTKRKNVETPRTLW*NIQGRI*SNPAE 12
Score = 42.3 bits (86), Expect = 0.006
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = -2 / -3
Query: 276 IHSSIPXHNNXHFHV*XLLXXXFVXXXLVKXTCXXSLIPNAA 151
IH+ IP H+N HFHV L + L+K LIPN A
Sbjct: 318 IHARIPSHDNSHFHVERLFDK*LIIAGLIKERRKPGLIPNPA 193
Score = 35.4 bits (71), Expect = 0.68
Identities = 20/61 (32%), Positives = 25/61 (40%)
Frame = +2 / +2
Query: 152 AAFGMRLXXQVXFTSXXITNXXXSXX*TWKXXLLXXGMLEWIXSXXXILMXXFXXXXXES 331
A FGMR ++ F S I + + TWK L GM WI LM + S
Sbjct: 194 AGFGMRPGFRLSFISPAIMSYLSNNLSTWKWLLSWLGMRAWIGYFILTLMS*YTQQVLVS 373
Query: 332 T 334
T
Sbjct: 374 T 376
>ref|NM_129708.1| Arabidopsis thaliana N-acetyltransferase AT2G41450 mRNA, complete cds
Length = 2976
Score = 79.0 bits (166), Expect(2) = 7e-030
Identities = 32/49 (65%), Positives = 37/49 (75%)
Frame = +3 / +1
Query: 3 ICITGSTSAGLHQILPWLYYHNVIGVSHFFLLVEGEAAKPAXTSVLESI 149
ICIT STSAGL Q LPW++YH VIGV F+L VEG AA P + VLE+I
Sbjct: 2011 ICITTSTSAGLEQTLPWIFYHKVIGVETFYLFVEGTAASPNVSRVLETI 2157
Score = 72.5 bits (152), Expect(2) = 7e-030
Identities = 33/61 (54%), Positives = 34/61 (55%)
Frame = +1 / +1
Query: 151 SRIWNETXXAGXFYKPXXYELXXXQXLNMEMXIIMXRDARMDXIXXXXTDXXIXXXXXRE 330
SRIWNET FYKP YEL Q LNMEM I M RDA MD I TD + RE
Sbjct: 2212 SRIWNETWLEKFFYKPCNYELFVKQNLNMEMAITMARDAGMDWILHLDTDELVHPSGTRE 2391
Query: 331 Y 333
Y
Sbjct: 2392 Y 2394
Score = 54.2 bits (112), Expect(2) = 1e-014
Identities = 28/49 (57%), Positives = 31/49 (63%)
Frame = -1 / -2
Query: 148 IDSRTEVXAGFAASPSTNRKKCETPMTL**YNHGRIWCRPADVLPVIQI 2
I S+T G AA PSTNR K TPMTL** HG + PA+VL VI I
Sbjct: 2156 IVSKTRETFGEAAVPSTNR*KVSTPMTL**NIHGNVCSNPAEVLVVIHI 2010
Score = 50.1 bits (103), Expect(2) = 9e-011
Identities = 19/38 (50%), Positives = 24/38 (63%)
Frame = +2 / +3
Query: 2 DLYHGKHICWPTPDSSMVVLSQCHWCFTFLSIS*RRGC 115
D+Y+ +H CW D +M +LSQ HW FLSI *R C
Sbjct: 2010 DMYNDEHFCWVRADIAMDILSQGHWS*NFLSIC*RHCC 2123
Score = 45.5 bits (93), Expect(2) = 1e-014
Identities = 26/61 (42%), Positives = 32/61 (52%)
Frame = -3 / -2
Query: 332 YSRXXXXXXXSSVXXXMXXSILASLXIIXXISMFXXCXXXSS*XXGL*XXPAXQVSFQMR 153
YSR SSV SI ASL ++ IS+F C +S* GL* + QVSF +R
Sbjct: 2393 YSRVPEGCTSSSVSRCSIQSIPASLAMVIAISIFKFCLTNNS*LHGL*KNFSNQVSFHIR 2214
Query: 152 L 150
L
Sbjct: 2213 L 2211
Score = 39.1 bits (79), Expect(2) = 8e-008
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = -2 / -1
Query: 276 IHSSIPXHNNXHFHV*XLLXXXFVXXXLVKXTCXXSLIPNAA 151
+H+SIP H + HFH+ L FV V+ SLIP A
Sbjct: 2337 VHTSIPCHGDSHFHIQVLFDE*FVITRFVEKLLQPSLIPYPA 2212
Score = 37.7 bits (76), Expect(2) = 8e-008
Identities = 20/45 (44%), Positives = 27/45 (60%)
Frame = -3 / -1
Query: 140 KNRGXSWLCSLSFN**KEM*NTNDIVIIQPWKNLV*ASRCASRDT 6
+N W S +FN * + N+ND+VI PW+ L+* SR A R T
Sbjct: 2148 QNSRNVWGSSSAFNK*IKSFNSNDLVIEYPWQCLL*PSRSARRYT 2014
Score = 36.8 bits (74), Expect(2) = 9e-011
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = +2 / +2
Query: 152 AAFGMRLXXQVXFTSXXITNXXXSXX*TWKXXLLXXGMLEWIXSXXXILMXXF 310
A +GMRL + T+ ITN + * WK GML W ILM +
Sbjct: 2213 AGYGMRLGWRSFSTNRVITNYSSNKT*IWKWLSPWQGMLVWTGYCILILMSLY 2371
Score = 33.6 bits (67), Expect(2) = 0.016
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = -1 / -3
Query: 301 HQYXXX*XNPF*HPXX**XXFPCLXXAXXXVRNXXACKXXLLXKSHSKCG 152
HQY +P+ HP * FP +RN C+ KSHS G
Sbjct: 2362 HQYQDAVSSPYQHPLPW**PFPYSSFV*RIIRNYTVCRKTSPTKSHSISG 2213
Score = 24.9 bits (48), Expect(2) = 0.016
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -2 / -3
Query: 96 IERNVKHQ*HCDNTTMEESGVGQQMCFP*YRS 1
I++ + Q* CD +M S + QQ C Y S
Sbjct: 2104 IDKKFQLQ*PCDRISMAMSALTQQKCSSLYIS 2009
>gb|AY735623.1| Arabidopsis thaliana hypothetical protein AT3G57200 mRNA, complete
cds
Length = 1939
Score = 81.7 bits (172), Expect(2) = 9e-030
Identities = 33/49 (67%), Positives = 39/49 (79%)
Frame = +3 / +1
Query: 3 ICITGSTSAGLHQILPWLYYHNVIGVSHFFLLVEGEAAKPAXTSVLESI 149
ICIT STSAGL Q LPW+Y+H VIGVS F+L VEG+AA P + VLE+I
Sbjct: 493 ICITTSTSAGLEQTLPWIYFHKVIGVSTFYLFVEGKAASPNVSRVLETI 639
Score = 69.3 bits (145), Expect(2) = 9e-030
Identities = 31/61 (50%), Positives = 34/61 (55%)
Frame = +1 / +1
Query: 151 SRIWNETXXAGXFYKPXXYELXXXQXLNMEMXIIMXRDARMDXIXXXXTDXXIXXXXXRE 330
SRIWNET + FYKP YEL Q LNMEM I M +DA M+ I TD I E
Sbjct: 694 SRIWNETWLSSFFYKPCNYELFVKQSLNMEMAITMAQDAGMEWIIHLDTDELIHPSGTHE 873
Query: 331 Y 333
Y
Sbjct: 874 Y 876
Score = 47.8 bits (98), Expect(2) = 3e-011
Identities = 24/47 (51%), Positives = 30/47 (63%)
Frame = -1 / -3
Query: 142 SRTEVXAGFAASPSTNRKKCETPMTL**YNHGRIWCRPADVLPVIQI 2
S+T G AA PSTNR ETP+TL* HG + +PA+VL V+ I
Sbjct: 632 SKTRDTFGDAAFPSTNR*NVETPITL*K*IHGNVCSKPAEVLVVMHI 492
Score = 47.8 bits (98), Expect(2) = 3e-007
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +2 / +3
Query: 2 DLYHGKHICWPTPDSSMVVLSQCHWCFTFLSIS*RRGC 115
D+++ KH CW + +M +LSQ +W F LSI * GC
Sbjct: 492 DMHYNKHFCWLRANIAMDLLSQSYWSFNILSIC*GEGC 605
Score = 40.9 bits (83), Expect(2) = 8e-008
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = -3 / -2
Query: 140 KNRGXSWLCSLSFN**KEM*NTNDIVIIQPWKNLV*ASRCA 18
+N W CSL N * + *N+N+ V + PW+ L+*ASR A
Sbjct: 630 QNSRHIWRCSLPLNK*IKC*NSNNFVKVNPWQCLL*ASRSA 508
Score = 40.9 bits (83), Expect(2) = 3e-011
Identities = 24/51 (47%), Positives = 28/51 (54%)
Frame = -3 / -3
Query: 302 SSVXXXMXXSILASLXIIXXISMFXXCXXXSS*XXGL*XXPAXQVSFQMRL 150
SSV M SI AS ++ ISMF C +S* GL* QVSF +RL
Sbjct: 845 SSVSR*MIHSIPAS*AMVIAISMFKDCFTNNS*LHGL*KKLDSQVSFHIRL 693
Score = 35.9 bits (72), Expect(2) = 8e-008
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = -2 / -2
Query: 300 ISXXXXDXIHSSIPXHNNXHFHV*XLLXXXFVXXXLVKXTCXXSLIPNAA 151
IS D H+S+ H + HFHV L F+ V+ SLIP A
Sbjct: 843 ISVKMNDPFHTSVLSHGDCHFHVQGLFHE*FIVTRFVEEARQPSLIPYPA 694
Score = 27.2 bits (53), Expect(2) = 3e-007
Identities = 17/59 (28%), Positives = 24/59 (40%)
Frame = +3 / +3
Query: 150 QPHLE*DLXSRXXLQAXXLRTXXXAXXKHGNXXYYXXGC*NGXXHXXXY**XXSXXXXP 326
+P +E*DL LQ L +HGN ++ G G H +** + P
Sbjct: 693 KPDME*DLAVELLLQTV*L*IIRETVLEHGNGNHHGSGRWYGMDHSS*H**AYTSFWNP 869
>ref|NM_115580.3| Arabidopsis thaliana unknown protein AT3G57200 mRNA, complete cds
Length = 1905
Score = 81.7 bits (172), Expect(2) = 9e-030
Identities = 33/49 (67%), Positives = 39/49 (79%)
Frame = +3 / +1
Query: 3 ICITGSTSAGLHQILPWLYYHNVIGVSHFFLLVEGEAAKPAXTSVLESI 149
ICIT STSAGL Q LPW+Y+H VIGVS F+L VEG+AA P + VLE+I
Sbjct: 493 ICITTSTSAGLEQTLPWIYFHKVIGVSTFYLFVEGKAASPNVSRVLETI 639
Score = 69.3 bits (145), Expect(2) = 9e-030
Identities = 31/61 (50%), Positives = 34/61 (55%)
Frame = +1 / +1
Query: 151 SRIWNETXXAGXFYKPXXYELXXXQXLNMEMXIIMXRDARMDXIXXXXTDXXIXXXXXRE 330
SRIWNET + FYKP YEL Q LNMEM I M +DA M+ I TD I E
Sbjct: 694 SRIWNETWLSSFFYKPCNYELFVKQSLNMEMAITMAQDAGMEWIIHLDTDELIHPSGTHE 873
Query: 331 Y 333
Y
Sbjct: 874 Y 876
Score = 47.8 bits (98), Expect(2) = 3e-011
Identities = 24/47 (51%), Positives = 30/47 (63%)
Frame = -1 / -2
Query: 142 SRTEVXAGFAASPSTNRKKCETPMTL**YNHGRIWCRPADVLPVIQI 2
S+T G AA PSTNR ETP+TL* HG + +PA+VL V+ I
Sbjct: 632 SKTRDTFGDAAFPSTNR*NVETPITL*K*IHGNVCSKPAEVLVVMHI 492
Score = 47.8 bits (98), Expect(2) = 3e-007
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +2 / +3
Query: 2 DLYHGKHICWPTPDSSMVVLSQCHWCFTFLSIS*RRGC 115
D+++ KH CW + +M +LSQ +W F LSI * GC
Sbjct: 492 DMHYNKHFCWLRANIAMDLLSQSYWSFNILSIC*GEGC 605
Score = 40.9 bits (83), Expect(2) = 8e-008
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = -3 / -1
Query: 140 KNRGXSWLCSLSFN**KEM*NTNDIVIIQPWKNLV*ASRCA 18
+N W CSL N * + *N+N+ V + PW+ L+*ASR A
Sbjct: 630 QNSRHIWRCSLPLNK*IKC*NSNNFVKVNPWQCLL*ASRSA 508
Score = 40.9 bits (83), Expect(2) = 3e-011
Identities = 24/51 (47%), Positives = 28/51 (54%)
Frame = -3 / -2
Query: 302 SSVXXXMXXSILASLXIIXXISMFXXCXXXSS*XXGL*XXPAXQVSFQMRL 150
SSV M SI AS ++ ISMF C +S* GL* QVSF +RL
Sbjct: 845 SSVSR*MIHSIPAS*AMVIAISMFKDCFTNNS*LHGL*KKLDSQVSFHIRL 693
Score = 35.9 bits (72), Expect(2) = 8e-008
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = -2 / -1
Query: 300 ISXXXXDXIHSSIPXHNNXHFHV*XLLXXXFVXXXLVKXTCXXSLIPNAA 151
IS D H+S+ H + HFHV L F+ V+ SLIP A
Sbjct: 843 ISVKMNDPFHTSVLSHGDCHFHVQGLFHE*FIVTRFVEEARQPSLIPYPA 694
Score = 27.2 bits (53), Expect(2) = 3e-007
Identities = 17/59 (28%), Positives = 24/59 (40%)
Frame = +3 / +3
Query: 150 QPHLE*DLXSRXXLQAXXLRTXXXAXXKHGNXXYYXXGC*NGXXHXXXY**XXSXXXXP 326
+P +E*DL LQ L +HGN ++ G G H +** + P
Sbjct: 693 KPDME*DLAVELLLQTV*L*IIRETVLEHGNGNHHGSGRWYGMDHSS*H**AYTSFWNP 869
>gb|AY954853.1| Arabidopsis thaliana hypothetical protein (At3g57200) mRNA,
complete cds
Length = 1545
Score = 81.7 bits (172), Expect(2) = 9e-030
Identities = 33/49 (67%), Positives = 39/49 (79%)
Frame = +3 / +1
Query: 3 ICITGSTSAGLHQILPWLYYHNVIGVSHFFLLVEGEAAKPAXTSVLESI 149
ICIT STSAGL Q LPW+Y+H VIGVS F+L VEG+AA P + VLE+I
Sbjct: 346 ICITTSTSAGLEQTLPWIYFHKVIGVSTFYLFVEGKAASPNVSRVLETI 492
Score = 69.3 bits (145), Expect(2) = 9e-030
Identities = 31/61 (50%), Positives = 34/61 (55%)
Frame = +1 / +1
Query: 151 SRIWNETXXAGXFYKPXXYELXXXQXLNMEMXIIMXRDARMDXIXXXXTDXXIXXXXXRE 330
SRIWNET + FYKP YEL Q LNMEM I M +DA M+ I TD I E
Sbjct: 547 SRIWNETWLSSFFYKPCNYELFVKQSLNMEMAITMAQDAGMEWIIHLDTDELIHPSGTHE 726
Query: 331 Y 333
Y
Sbjct: 727 Y 729
Score = 47.8 bits (98), Expect(2) = 3e-011
Identities = 24/47 (51%), Positives = 30/47 (63%)
Frame = -1 / -2
Query: 142 SRTEVXAGFAASPSTNRKKCETPMTL**YNHGRIWCRPADVLPVIQI 2
S+T G AA PSTNR ETP+TL* HG + +PA+VL V+ I
Sbjct: 485 SKTRDTFGDAAFPSTNR*NVETPITL*K*IHGNVCSKPAEVLVVMHI 345
Score = 47.8 bits (98), Expect(2) = 3e-007
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +2 / +3
Query: 2 DLYHGKHICWPTPDSSMVVLSQCHWCFTFLSIS*RRGC 115
D+++ KH CW + +M +LSQ +W F LSI * GC
Sbjct: 345 DMHYNKHFCWLRANIAMDLLSQSYWSFNILSIC*GEGC 458
Score = 40.9 bits (83), Expect(2) = 8e-008
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = -3 / -1
Query: 140 KNRGXSWLCSLSFN**KEM*NTNDIVIIQPWKNLV*ASRCA 18
+N W CSL N * + *N+N+ V + PW+ L+*ASR A
Sbjct: 483 QNSRHIWRCSLPLNK*IKC*NSNNFVKVNPWQCLL*ASRSA 361
Score = 40.9 bits (83), Expect(2) = 3e-011
Identities = 24/51 (47%), Positives = 28/51 (54%)
Frame = -3 / -2
Query: 302 SSVXXXMXXSILASLXIIXXISMFXXCXXXSS*XXGL*XXPAXQVSFQMRL 150
SSV M SI AS ++ ISMF C +S* GL* QVSF +RL
Sbjct: 698 SSVSR*MIHSIPAS*AMVIAISMFKDCFTNNS*LHGL*KKLDSQVSFHIRL 546
Score = 35.9 bits (72), Expect(2) = 8e-008
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = -2 / -1
Query: 300 ISXXXXDXIHSSIPXHNNXHFHV*XLLXXXFVXXXLVKXTCXXSLIPNAA 151
IS D H+S+ H + HFHV L F+ V+ SLIP A
Sbjct: 696 ISVKMNDPFHTSVLSHGDCHFHVQGLFHE*FIVTRFVEEARQPSLIPYPA 547
Score = 27.2 bits (53), Expect(2) = 3e-007
Identities = 17/59 (28%), Positives = 24/59 (40%)
Frame = +3 / +3
Query: 150 QPHLE*DLXSRXXLQAXXLRTXXXAXXKHGNXXYYXXGC*NGXXHXXXY**XXSXXXXP 326
+P +E*DL LQ L +HGN ++ G G H +** + P
Sbjct: 546 KPDME*DLAVELLLQTV*L*IIRETVLEHGNGNHHGSGRWYGMDHSS*H**AYTSFWNP 722
>gb|AC012562.5|AC012562 Arabidopsis thaliana chromosome 3 BAC F17O14 genomic sequence,
complete sequence
Length = 90721
Score = 86.8 bits (183), Expect(2) = 2e-025
Identities = 35/49 (71%), Positives = 41/49 (83%)
Frame = +3 / +3
Query: 3 ICITGSTSAGLHQILPWLYYHNVIGVSHFFLLVEGEAAKPAXTSVLESI 149
ICIT STSAGL QILPW++YH V+GVS FFL VEG+AA P+ + VLESI
Sbjct: 8067 ICITTSTSAGLDQILPWMFYHKVLGVSTFFLFVEGKAATPSISKVLESI 8213
Score = 57.4 bits (119), Expect(2) = 2e-025
Identities = 23/37 (62%), Positives = 25/37 (67%)
Frame = +1 / +1
Query: 151 SRIWNETXXAGXFYKPXXYELXXXQXLNMEMXIIMXR 261
SRIWNET + FYKP YEL Q LNMEM I+M R
Sbjct: 8563 SRIWNETWLSSFFYKPCNYELFVKQSLNMEMAIVMAR 8673
Score = 56.5 bits (117), Expect(2) = 2e-010
Identities = 30/49 (61%), Positives = 30/49 (61%)
Frame = -1 / -1
Query: 148 IDSRTEVXAGFAASPSTNRKKCETPMTL**YNHGRIWCRPADVLPVIQI 2
IDS T G AA PST RK ETP TL * HGRI PADVL VI I
Sbjct: 8212 IDSSTLEILGVAAFPSTKRKNVETPRTLW*NIHGRI*SNPADVLVVIHI 8066
Score = 36.3 bits (73), Expect(2) = 8e-004
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = -3 / -3
Query: 149 NRFKNRGXSWLCSLSFN**KEM*NTNDIVIIQPWKNLV*ASRCASRDT 6
NR ++ + S FN +E *+ ++++ PW NL+ +S CASRDT
Sbjct: 8213 NRLEHFRNTRSSSFPFNEKEEC*DA*NLMVEHPW*NLIQSS*CASRDT 8070
Score = 36.3 bits (73), Expect(2) = 2e-010
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -2 / -2
Query: 270 SSIPXHNNXHFHV*XLLXXXFVXXXLVKXTCXXSLIPNAAE 148
++ P H+N HFHV L + L+K LIPN A+
Sbjct: 8682 NTYPSHDNSHFHVERLFDK*LIIAGLIKERRKPGLIPNPAD 8560
Score = 34.1 bits (68), Expect(2) = 8e-004
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = -3 / -3
Query: 269 LASLXIIXXISMFXXCXXXSS*XXGL*XXPAXQVSFQMRL 150
+ +L + ISM C +S* GL* QVSFQ+RL
Sbjct: 8681 ILTLAMTIAISMLRDCLTNNS*LQGL*KKDESQVSFQIRL 8562
Score = 31.8 bits (63), Expect(2) = 0.75
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1 / +1
Query: 1 RSVSREAHLLAYTRFFHGC 57
R VSR AH L + RF+HGC
Sbjct: 8065 RYVSRLAHQLDWIRFYHGC 8121
Score = 28.1 bits (55), Expect(2) = 0.75
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +2 / +2
Query: 143 IYSAAFGMRLXXQVXFTSXXITNXXXSXX*TWKXXLLXXG 262
+ SA FGMR ++ F S I + + TWK L G
Sbjct: 8555 VSSAGFGMRPGFRLSFISPAIMSYLSNNLSTWKWLLSWLG 8674
>dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complete sequence
Length = 23403063
Score = 86.8 bits (183), Expect(2) = 4e-023
Identities = 35/49 (71%), Positives = 41/49 (83%)
Frame = +3 / +3
Query: 3 ICITGSTSAGLHQILPWLYYHNVIGVSHFFLLVEGEAAKPAXTSVLESI 149
ICIT STSAGL QILPW++YH V+GVS FFL VEG+AA P+ + VLESI
Sbjct: 2593125 ICITTSTSAGLDQILPWMFYHKVLGVSTFFLFVEGKAATPSISKVLESI 2593271
Score = 81.7 bits (172), Expect(2) = 1e-020
Identities = 33/49 (67%), Positives = 39/49 (79%)
Frame = +3 / +3
Query: 3 ICITGSTSAGLHQILPWLYYHNVIGVSHFFLLVEGEAAKPAXTSVLESI 149
ICIT STSAGL Q LPW+Y+H VIGVS F+L VEG+AA P + VLE+I
Sbjct: 21133350 ICITTSTSAGLEQTLPWIYFHKVIGVSTFYLFVEGKAASPNVSRVLETI 21133496
Score = 57.4 bits (119), Expect(2) = 4e-023
Identities = 23/37 (62%), Positives = 25/37 (67%)
Frame = +1 / +1
Query: 151 SRIWNETXXAGXFYKPXXYELXXXQXLNMEMXIIMXR 261
SRIWNET + FYKP YEL Q LNMEM I+M R
Sbjct: 2593621 SRIWNETWLSSFFYKPCNYELFVKQSLNMEMAIVMAR 2593731
Score = 56.5 bits (117), Expect(2) = 4e-008
Identities = 30/49 (61%), Positives = 30/49 (61%)
Frame = -1 / -3
Query: 148 IDSRTEVXAGFAASPSTNRKKCETPMTL**YNHGRIWCRPADVLPVIQI 2
IDS T G AA PST RK ETP TL * HGRI PADVL VI I
Sbjct: 2593270 IDSSTLEILGVAAFPSTKRKNVETPRTLW*NIHGRI*SNPADVLVVIHI 2593124
Score = 53.8 bits (111), Expect(2) = 1e-020
Identities = 22/37 (59%), Positives = 24/37 (64%)
Frame = +1 / +2
Query: 151 SRIWNETXXAGXFYKPXXYELXXXQXLNMEMXIIMXR 261
SRIWNET + FYKP YEL Q LNMEM I M +
Sbjct: 21133769 SRIWNETWLSSFFYKPCNYELFVKQSLNMEMAITMAQ 21133879
Score = 47.8 bits (98), Expect = 1e-004
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +2 / +2
Query: 2 DLYHGKHICWPTPDSSMVVLSQCHWCFTFLSIS*RRGC 115
D+++ KH CW + +M +LSQ +W F LSI * GC
Sbjct: 21133349 DMHYNKHFCWLRANIAMDLLSQSYWSFNILSIC*GEGC 21133462
Score = 47.8 bits (98), Expect = 1e-004
Identities = 24/47 (51%), Positives = 30/47 (63%)
Frame = -1 / -3
Query: 142 SRTEVXAGFAASPSTNRKKCETPMTL**YNHGRIWCRPADVLPVIQI 2
S+T G AA PSTNR ETP+TL* HG + +PA+VL V+ I
Sbjct: 21133489 SKTRDTFGDAAFPSTNR*NVETPITL*K*IHGNVCSKPAEVLVVMHI 21133349
Score = 40.9 bits (83), Expect = 0.015
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = -3 / -2
Query: 140 KNRGXSWLCSLSFN**KEM*NTNDIVIIQPWKNLV*ASRCA 18
+N W CSL N * + *N+N+ V + PW+ L+*ASR A
Sbjct: 21133487 QNSRHIWRCSLPLNK*IKC*NSNNFVKVNPWQCLL*ASRSA 21133365
Score = 36.3 bits (73), Expect(2) = 0.093
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = -3 / -2
Query: 149 NRFKNRGXSWLCSLSFN**KEM*NTNDIVIIQPWKNLV*ASRCASRDT 6
NR ++ + S FN +E *+ ++++ PW NL+ +S CASRDT
Sbjct: 2593271 NRLEHFRNTRSSSFPFNEKEEC*DA*NLMVEHPW*NLIQSS*CASRDT 2593128
Score = 36.3 bits (73), Expect(2) = 4e-008
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -2 / -1
Query: 270 SSIPXHNNXHFHV*XLLXXXFVXXXLVKXTCXXSLIPNAAE 148
++ P H+N HFHV L + L+K LIPN A+
Sbjct: 2593740 NTYPSHDNSHFHVERLFDK*LIIAGLIKERRKPGLIPNPAD 2593618
Score = 34.1 bits (68), Expect(2) = 0.093
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = -3 / -2
Query: 269 LASLXIIXXISMFXXCXXXSS*XXGL*XXPAXQVSFQMRL 150
+ +L + ISM C +S* GL* QVSFQ+RL
Sbjct: 2593739 ILTLAMTIAISMLRDCLTNNS*LQGL*KKDESQVSFQIRL 2593620
Score = 34.1 bits (68), Expect = 1.8
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3 / -3
Query: 45 LPWLYYHNVIGVSHFFLLVEGEAAK 119
LPW+ YH + G HF VEG K
Sbjct: 17889970 LPWIRYHEISGSGHFVPFVEGMTDK 17889896
Score = 32.2 bits (64), Expect = 6.3
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -3 / -1
Query: 254 IIXXISMFXXCXXXSS*XXGL*XXPAXQVSFQMRL 150
++ ISMF C +S* GL* QVSF +RL
Sbjct: 21133872 MVIAISMFKDCFTNNS*LHGL*KKLDSQVSFHIRL 21133768
Score = 31.8 bits (63), Expect = 8.6
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1 / +1
Query: 1 RSVSREAHLLAYTRFFHGC 57
R VSR AH L + RF+HGC
Sbjct: 2593123 RYVSRLAHQLDWIRFYHGC 2593179
>ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complete sequence
Length = 23470805
Score = 86.8 bits (183), Expect(2) = 4e-023
Identities = 35/49 (71%), Positives = 41/49 (83%)
Frame = +3 / +2
Query: 3 ICITGSTSAGLHQILPWLYYHNVIGVSHFFLLVEGEAAKPAXTSVLESI 149
ICIT STSAGL QILPW++YH V+GVS FFL VEG+AA P+ + VLESI
Sbjct: 2597150 ICITTSTSAGLDQILPWMFYHKVLGVSTFFLFVEGKAATPSISKVLESI 2597296
Score = 81.7 bits (172), Expect(2) = 1e-020
Identities = 33/49 (67%), Positives = 39/49 (79%)
Frame = +3 / +1
Query: 3 ICITGSTSAGLHQILPWLYYHNVIGVSHFFLLVEGEAAKPAXTSVLESI 149
ICIT STSAGL Q LPW+Y+H VIGVS F+L VEG+AA P + VLE+I
Sbjct: 21180874 ICITTSTSAGLEQTLPWIYFHKVIGVSTFYLFVEGKAASPNVSRVLETI 21181020
Score = 57.4 bits (119), Expect(2) = 4e-023
Identities = 23/37 (62%), Positives = 25/37 (67%)
Frame = +1 / +3
Query: 151 SRIWNETXXAGXFYKPXXYELXXXQXLNMEMXIIMXR 261
SRIWNET + FYKP YEL Q LNMEM I+M R
Sbjct: 2597646 SRIWNETWLSSFFYKPCNYELFVKQSLNMEMAIVMAR 2597756
Score = 56.5 bits (117), Expect(2) = 4e-008
Identities = 30/49 (61%), Positives = 30/49 (61%)
Frame = -1 / -3
Query: 148 IDSRTEVXAGFAASPSTNRKKCETPMTL**YNHGRIWCRPADVLPVIQI 2
IDS T G AA PST RK ETP TL * HGRI PADVL VI I
Sbjct: 2597295 IDSSTLEILGVAAFPSTKRKNVETPRTLW*NIHGRI*SNPADVLVVIHI 2597149
Score = 53.8 bits (111), Expect(2) = 1e-020
Identities = 22/37 (59%), Positives = 24/37 (64%)
Frame = +1 / +3
Query: 151 SRIWNETXXAGXFYKPXXYELXXXQXLNMEMXIIMXR 261
SRIWNET + FYKP YEL Q LNMEM I M +
Sbjct: 21181293 SRIWNETWLSSFFYKPCNYELFVKQSLNMEMAITMAQ 21181403
Score = 47.8 bits (98), Expect = 1e-004
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +2 / +3
Query: 2 DLYHGKHICWPTPDSSMVVLSQCHWCFTFLSIS*RRGC 115
D+++ KH CW + +M +LSQ +W F LSI * GC
Sbjct: 21180873 DMHYNKHFCWLRANIAMDLLSQSYWSFNILSIC*GEGC 21180986
Score = 47.8 bits (98), Expect = 1e-004
Identities = 24/47 (51%), Positives = 30/47 (63%)
Frame = -1 / -1
Query: 142 SRTEVXAGFAASPSTNRKKCETPMTL**YNHGRIWCRPADVLPVIQI 2
S+T G AA PSTNR ETP+TL* HG + +PA+VL V+ I
Sbjct: 21181013 SKTRDTFGDAAFPSTNR*NVETPITL*K*IHGNVCSKPAEVLVVMHI 21180873
Score = 40.9 bits (83), Expect = 0.015
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = -3 / -3
Query: 140 KNRGXSWLCSLSFN**KEM*NTNDIVIIQPWKNLV*ASRCA 18
+N W CSL N * + *N+N+ V + PW+ L+*ASR A
Sbjct: 21181011 QNSRHIWRCSLPLNK*IKC*NSNNFVKVNPWQCLL*ASRSA 21180889
Score = 36.3 bits (73), Expect(2) = 0.094
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = -3 / -2
Query: 149 NRFKNRGXSWLCSLSFN**KEM*NTNDIVIIQPWKNLV*ASRCASRDT 6
NR ++ + S FN +E *+ ++++ PW NL+ +S CASRDT
Sbjct: 2597296 NRLEHFRNTRSSSFPFNEKEEC*DA*NLMVEHPW*NLIQSS*CASRDT 2597153
Score = 36.3 bits (73), Expect(2) = 4e-008
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -2 / -1
Query: 270 SSIPXHNNXHFHV*XLLXXXFVXXXLVKXTCXXSLIPNAAE 148
++ P H+N HFHV L + L+K LIPN A+
Sbjct: 2597765 NTYPSHDNSHFHVERLFDK*LIIAGLIKERRKPGLIPNPAD 2597643
Score = 34.1 bits (68), Expect(2) = 0.094
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = -3 / -2
Query: 269 LASLXIIXXISMFXXCXXXSS*XXGL*XXPAXQVSFQMRL 150
+ +L + ISM C +S* GL* QVSFQ+RL
Sbjct: 2597764 ILTLAMTIAISMLRDCLTNNS*LQGL*KKDESQVSFQIRL 2597645
Score = 34.1 bits (68), Expect = 1.8
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3 / -2
Query: 45 LPWLYYHNVIGVSHFFLLVEGEAAK 119
LPW+ YH + G HF VEG K
Sbjct: 17936908 LPWIRYHEISGSGHFVPFVEGMTDK 17936834
Score = 32.2 bits (64), Expect = 6.3
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -3 / -2
Query: 254 IIXXISMFXXCXXXSS*XXGL*XXPAXQVSFQMRL 150
++ ISMF C +S* GL* QVSF +RL
Sbjct: 21181396 MVIAISMFKDCFTNNS*LHGL*KKLDSQVSFHIRL 21181292
Score = 31.8 bits (63), Expect = 8.6
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1 / +3
Query: 1 RSVSREAHLLAYTRFFHGC 57
R VSR AH L + RF+HGC
Sbjct: 2597148 RYVSRLAHQLDWIRFYHGC 2597204
>gb|AC004625.3| Arabidopsis thaliana chromosome 2 clone T26J13 map CIC11C08, complete
sequence
Length = 42499
Score = 79.0 bits (166), Expect(2) = 6e-023
Identities = 32/49 (65%), Positives = 37/49 (75%)
Frame = +3 / +3
Query: 3 ICITGSTSAGLHQILPWLYYHNVIGVSHFFLLVEGEAAKPAXTSVLESI 149
ICIT STSAGL Q LPW++YH VIGV F+L VEG AA P + VLE+I
Sbjct: 16572 ICITTSTSAGLEQTLPWIFYHKVIGVETFYLFVEGTAASPNVSRVLETI 16718
Score = 55.6 bits (115), Expect(2) = 6e-023
Identities = 24/42 (57%), Positives = 26/42 (61%)
Frame = +1 / +3
Query: 136 FLNLFSRIWNETXXAGXFYKPXXYELXXXQXLNMEMXIIMXR 261
F ++SRIWNET FYKP YEL Q LNMEM I M R
Sbjct: 17109 FSLVYSRIWNETWLEKFFYKPCNYELFVKQNLNMEMAITMAR 17234
Score = 54.2 bits (112), Expect(2) = 2e-009
Identities = 28/49 (57%), Positives = 31/49 (63%)
Frame = -1 / -1
Query: 148 IDSRTEVXAGFAASPSTNRKKCETPMTL**YNHGRIWCRPADVLPVIQI 2
I S+T G AA PSTNR K TPMTL** HG + PA+VL VI I
Sbjct: 16717 IVSKTRETFGEAAVPSTNR*KVSTPMTL**NIHGNVCSNPAEVLVVIHI 16571
Score = 50.1 bits (103), Expect(2) = 2e-006
Identities = 19/38 (50%), Positives = 24/38 (63%)
Frame = +2 / +2
Query: 2 DLYHGKHICWPTPDSSMVVLSQCHWCFTFLSIS*RRGC 115
D+Y+ +H CW D +M +LSQ HW FLSI *R C
Sbjct: 16571 DMYNDEHFCWVRADIAMDILSQGHWS*NFLSIC*RHCC 16684
Score = 37.7 bits (76), Expect(2) = 0.002
Identities = 20/45 (44%), Positives = 27/45 (60%)
Frame = -3 / -3
Query: 140 KNRGXSWLCSLSFN**KEM*NTNDIVIIQPWKNLV*ASRCASRDT 6
+N W S +FN * + N+ND+VI PW+ L+* SR A R T
Sbjct: 16709 QNSRNVWGSSSAFNK*IKSFNSNDLVIEYPWQCLL*PSRSARRYT 16575
Score = 34.5 bits (69), Expect(2) = 2e-009
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = -3 / -1
Query: 275 SILASLXIIXXISMFXXCXXXSS*XXGL*XXPAXQVSFQMRL 150
++ +L ++ IS+F C +S* GL* + QVSF +RL
Sbjct: 17248 NVTGTLAMVIAISIFKFCLTNNS*LHGL*KNFSNQVSFHIRL 17123
Score = 29.9 bits (59), Expect(2) = 0.002
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -2 / -3
Query: 261 PXHNNXHFHV*XLLXXXFVXXXLVKXTCXXSLIPNAA 151
P H + HFH+ L FV V+ SLIP A
Sbjct: 17234 PCHGDSHFHIQVLFDE*FVITRFVEKLLQPSLIPYPA 17124
Score = 28.1 bits (55), Expect(2) = 2e-006
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2 / +1
Query: 146 YSAAFGMRLXXQVXFTSXXITNXXXSXX*TWK 241
+ A +GMRL + T+ ITN + * WK
Sbjct: 17119 FIAGYGMRLGWRSFSTNRVITNYSSNKT*IWK 17214
>emb|AL137080.2|ATF28O9 Arabidopsis thaliana DNA chromosome 3, BAC clone F28O9
Length = 85710
Score = 81.7 bits (172), Expect(2) = 6e-023
Identities = 33/49 (67%), Positives = 39/49 (79%)
Frame = +3 / +3
Query: 3 ICITGSTSAGLHQILPWLYYHNVIGVSHFFLLVEGEAAKPAXTSVLESI 149
ICIT STSAGL Q LPW+Y+H VIGVS F+L VEG+AA P + VLE+I
Sbjct: 9351 ICITTSTSAGLEQTLPWIYFHKVIGVSTFYLFVEGKAASPNVSRVLETI 9497
Score = 53.8 bits (111), Expect(2) = 6e-023
Identities = 22/37 (59%), Positives = 24/37 (64%)
Frame = +1 / +2
Query: 151 SRIWNETXXAGXFYKPXXYELXXXQXLNMEMXIIMXR 261
SRIWNET + FYKP YEL Q LNMEM I M +
Sbjct: 9770 SRIWNETWLSSFFYKPCNYELFVKQSLNMEMAITMAQ 9880
Score = 47.8 bits (98), Expect(2) = 1e-006
Identities = 24/47 (51%), Positives = 30/47 (63%)
Frame = -1 / -3
Query: 142 SRTEVXAGFAASPSTNRKKCETPMTL**YNHGRIWCRPADVLPVIQI 2
S+T G AA PSTNR ETP+TL* HG + +PA+VL V+ I
Sbjct: 9490 SKTRDTFGDAAFPSTNR*NVETPITL*K*IHGNVCSKPAEVLVVMHI 9350
Score = 47.8 bits (98), Expect(2) = 7e-005
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +2 / +2
Query: 2 DLYHGKHICWPTPDSSMVVLSQCHWCFTFLSIS*RRGC 115
D+++ KH CW + +M +LSQ +W F LSI * GC
Sbjct: 9350 DMHYNKHFCWLRANIAMDLLSQSYWSFNILSIC*GEGC 9463
Score = 40.9 bits (83), Expect(2) = 0.006
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = -3 / -2
Query: 140 KNRGXSWLCSLSFN**KEM*NTNDIVIIQPWKNLV*ASRCA 18
+N W CSL N * + *N+N+ V + PW+ L+*ASR A
Sbjct: 9488 QNSRHIWRCSLPLNK*IKC*NSNNFVKVNPWQCLL*ASRSA 9366
Score = 32.2 bits (64), Expect(2) = 1e-006
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -3 / -1
Query: 254 IIXXISMFXXCXXXSS*XXGL*XXPAXQVSFQMRL 150
++ ISMF C +S* GL* QVSF +RL
Sbjct: 9873 MVIAISMFKDCFTNNS*LHGL*KKLDSQVSFHIRL 9769
Score = 26.3 bits (51), Expect(2) = 0.006
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -2 / -3
Query: 255 HNNXHFHV*XLLXXXFVXXXLVKXTCXXSLIPNAA 151
H + HFHV L F+ V+ SLIP A
Sbjct: 9874 HGDCHFHVQGLFHE*FIVTRFVEEARQPSLIPYPA 9770
Score = 26.3 bits (51), Expect(2) = 7e-005
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +3 / +1
Query: 150 QPHLE*DLXSRXXLQAXXLRTXXXAXXKHGNXXYYXXG 263
QP +E*DL LQ L +HGN ++ G
Sbjct: 9769 QPDME*DLAVELLLQTV*L*IIRETVLEHGNGNHHGSG 9882
>ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complete sequence
Length = 19705359
Score = 79.0 bits (166), Expect(2) = 2e-020
Identities = 32/49 (65%), Positives = 37/49 (75%)
Frame = +3 / +3
Query: 3 ICITGSTSAGLHQILPWLYYHNVIGVSHFFLLVEGEAAKPAXTSVLESI 149
ICIT STSAGL Q LPW++YH VIGV F+L VEG AA P + VLE+I
Sbjct: 17290413 ICITTSTSAGLEQTLPWIFYHKVIGVETFYLFVEGTAASPNVSRVLETI 17290559
Score = 55.6 bits (115), Expect(2) = 2e-020
Identities = 24/42 (57%), Positives = 26/42 (61%)
Frame = +1 / +3
Query: 136 FLNLFSRIWNETXXAGXFYKPXXYELXXXQXLNMEMXIIMXR 261
F ++SRIWNET FYKP YEL Q LNMEM I M R
Sbjct: 17290950 FSLVYSRIWNETWLEKFFYKPCNYELFVKQNLNMEMAITMAR 17291075
Score = 54.2 bits (112), Expect(2) = 6e-007
Identities = 28/49 (57%), Positives = 31/49 (63%)
Frame = -1 / -3
Query: 148 IDSRTEVXAGFAASPSTNRKKCETPMTL**YNHGRIWCRPADVLPVIQI 2
I S+T G AA PSTNR K TPMTL** HG + PA+VL VI I
Sbjct: 17290558 IVSKTRETFGEAAVPSTNR*KVSTPMTL**NIHGNVCSNPAEVLVVIHI 17290412
Score = 50.1 bits (103), Expect = 3e-005
Identities = 19/38 (50%), Positives = 24/38 (63%)
Frame = +2 / +2
Query: 2 DLYHGKHICWPTPDSSMVVLSQCHWCFTFLSIS*RRGC 115
D+Y+ +H CW D +M +LSQ HW FLSI *R C
Sbjct: 17290412 DMYNDEHFCWVRADIAMDILSQGHWS*NFLSIC*RHCC 17290525
Score = 37.7 bits (76), Expect = 0.14
Identities = 20/45 (44%), Positives = 27/45 (60%)
Frame = -3 / -2
Query: 140 KNRGXSWLCSLSFN**KEM*NTNDIVIIQPWKNLV*ASRCASRDT 6
+N W S +FN * + N+ND+VI PW+ L+* SR A R T
Sbjct: 17290550 QNSRNVWGSSSAFNK*IKSFNSNDLVIEYPWQCLL*PSRSARRYT 17290416
Score = 34.5 bits (69), Expect(2) = 6e-007
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = -3 / -3
Query: 275 SILASLXIIXXISMFXXCXXXSS*XXGL*XXPAXQVSFQMRL 150
++ +L ++ IS+F C +S* GL* + QVSF +RL
Sbjct: 17291089 NVTGTLAMVIAISIFKFCLTNNS*LHGL*KNFSNQVSFHIRL 17290964
Score = 31.8 bits (63), Expect = 8.6
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +3 / -2
Query: 45 LPWLYYHNVIGVSHFFLLVEG 107
LPW++YH + G H F G
Sbjct: 15216062 LPWIHYHEIPGAGHLFPFAPG 15216000
>gb|B26115.1|B26115 T9E5TF TAMU Arabidopsis thaliana genomic clone T9E5, DNA sequence
Length = 632
Score = 70.7 bits (148), Expect = 2e-011
Identities = 28/40 (70%), Positives = 31/40 (77%)
Frame = +3 / +1
Query: 3 ICITGSTSAGLHQILPWLYYHNVIGVSHFFLLVEGEAAKP 122
ICIT STSAGL Q LPW++YH VIGV F+L VEG AA P
Sbjct: 508 ICITTSTSAGLEQTLPWIFYHKVIGVETFYLFVEGTAAFP 627
Score = 50.6 bits (104), Expect = 2e-005
Identities = 25/40 (62%), Positives = 27/40 (67%)
Frame = -1 / -1
Query: 121 GFAASPSTNRKKCETPMTL**YNHGRIWCRPADVLPVIQI 2
G AA PSTNR K TPMTL** HG + PA+VL VI I
Sbjct: 626 GKAAVPSTNR*KVSTPMTL**NIHGNVCSNPAEVLVVIHI 507
Score = 50.1 bits (103), Expect = 3e-005
Identities = 19/38 (50%), Positives = 24/38 (63%)
Frame = +2 / +3
Query: 2 DLYHGKHICWPTPDSSMVVLSQCHWCFTFLSIS*RRGC 115
D+Y+ +H CW D +M +LSQ HW FLSI *R C
Sbjct: 507 DMYNDEHFCWVRADIAMDILSQGHWS*NFLSIC*RHCC 620
Score = 36.8 bits (74), Expect = 0.26
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = -3 / -3
Query: 122 WLCSLSFN**KEM*NTNDIVIIQPWKNLV*ASRCASRDT 6
W S +FN * + N+ND+VI PW+ L+* SR A R T
Sbjct: 627 WEGSSAFNK*IKSFNSNDLVIEYPWQCLL*PSRSARRYT 511
>emb|AL771508.1| Arabidopsis thaliana T-DNA flanking sequence GK-180H08-013602,
genomic survey sequence
Length = 335
Score = 62.5 bits (130), Expect = 5e-009
Identities = 24/36 (66%), Positives = 29/36 (80%)
Frame = +3 / -1
Query: 3 ICITGSTSAGLHQILPWLYYHNVIGVSHFFLLVEGE 110
ICIT STSAGL Q LPW+Y+H VIGVS F++ V G+
Sbjct: 110 ICITTSTSAGLEQTLPWIYFHKVIGVSTFYIYV*GK 3
Score = 39.1 bits (79), Expect = 0.053
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2 / -3
Query: 2 DLYHGKHICWPTPDSSMVVLSQCHWCFTFLSI 97
D+++ KH CW + +M +LSQ +W F L I
Sbjct: 111 DMHYNKHFCWLRANIAMDLLSQSYWSFNILYI 16
>gb|BZ384988.1|BZ384988 SALK_136286.43.20.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_136286.43.20.x,
DNA sequence
Length = 403
Score = 43.7 bits (89), Expect = 0.002
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +3 / -1
Query: 3 ICITGSTSAGLHQILPWLYYHNV 71
ICI+ STSAGL Q LPW+ YH V
Sbjct: 70 ICISTSTSAGLEQTLPWILYHKV 2
>emb|AJ599876.1| Arabidopsis thaliana T-DNA flanking sequence, right border, clone
495H07, genomic survey sequence
Length = 446
Score = 38.2 bits (77), Expect = 0.10
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3 / -2
Query: 45 LPWLYYHNVIGVSHFFLLVEG 107
LPWL+YH V G HFF L +G
Sbjct: 361 LPWLHYHEVAGGGHFFPLAKG 299
>gb|BE521947.1|BE521947 M22F3XTM Arabidopsis developing seed Arabidopsis thaliana cDNA
clone M22F3 3', mRNA sequence
Length = 356
Score = 38.2 bits (77), Expect = 0.10
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3 / -1
Query: 45 LPWLYYHNVIGVSHFFLLVEG 107
LPWL+YH V G HFF L +G
Sbjct: 230 LPWLHYHEVAGGGHFFPLAKG 168
>gb|AU226191.1|AU226191 AU226191 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-14-I22 3',
mRNA sequence
Length = 421
Score = 38.2 bits (77), Expect = 0.10
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3 / -2
Query: 45 LPWLYYHNVIGVSHFFLLVEG 107
LPWL+YH V G HFF L +G
Sbjct: 228 LPWLHYHEVAGGGHFFPLAKG 166
>gb|BP565961.1|BP565961 BP565961 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-51-P13 3',
mRNA sequence
Length = 423
Score = 38.2 bits (77), Expect = 0.10
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3 / -1
Query: 45 LPWLYYHNVIGVSHFFLLVEG 107
LPWL+YH V G HFF L +G
Sbjct: 231 LPWLHYHEVAGGGHFFPLAKG 169
>gb|BP567430.1|BP567430 BP567430 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-58-A04 3',
mRNA sequence
Length = 412
Score = 38.2 bits (77), Expect = 0.10
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3 / -2
Query: 45 LPWLYYHNVIGVSHFFLLVEG 107
LPWL+YH V G HFF L +G
Sbjct: 228 LPWLHYHEVAGGGHFFPLAKG 166
>gb|BP569063.1|BP569063 BP569063 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-65-G11 3',
mRNA sequence
Length = 448
Score = 38.2 bits (77), Expect = 0.10
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3 / -2
Query: 45 LPWLYYHNVIGVSHFFLLVEG 107
LPWL+YH V G HFF L +G
Sbjct: 228 LPWLHYHEVAGGGHFFPLAKG 166
>gb|BP578994.1|BP578994 BP578994 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-20-I20 3',
mRNA sequence
Length = 447
Score = 38.2 bits (77), Expect = 0.10
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3 / -1
Query: 45 LPWLYYHNVIGVSHFFLLVEG 107
LPWL+YH V G HFF L +G
Sbjct: 234 LPWLHYHEVAGGGHFFPLAKG 172
>gb|BP579629.1|BP579629 BP579629 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-23-H20 3',
mRNA sequence
Length = 505
Score = 38.2 bits (77), Expect = 0.10
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3 / -2
Query: 45 LPWLYYHNVIGVSHFFLLVEG 107
LPWL+YH V G HFF L +G
Sbjct: 228 LPWLHYHEVAGGGHFFPLAKG 166
>gb|BP627245.1|BP627245 BP627245 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-50-G19 3',
mRNA sequence
Length = 440
Score = 38.2 bits (77), Expect = 0.10
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3 / -1
Query: 45 LPWLYYHNVIGVSHFFLLVEG 107
LPWL+YH V G HFF L +G
Sbjct: 236 LPWLHYHEVAGGGHFFPLAKG 174
>gb|AF218796.1|AF218796 Arabidopsis thaliana heat shock protein 101 (HSP101) gene, complete
cds
Length = 6376
Score = 38.2 bits (77), Expect = 0.10
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3 / -1
Query: 45 LPWLYYHNVIGVSHFFLLVEG 107
LPWL+YH V G HFF L +G
Sbjct: 4621 LPWLHYHEVAGGGHFFPLAKG 4559
>emb|AJ520877.1|ATH520877 Arabidopsis thaliana T-DNA flanking sequence, left border, clone
047H06
Length = 488
Score = 38.2 bits (77), Expect = 0.10
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3 / -2
Query: 45 LPWLYYHNVIGVSHFFLLVEG 107
LPWL+YH V G HFF L +G
Sbjct: 403 LPWLHYHEVAGGGHFFPLAKG 341
>gb|AY087050.1| Arabidopsis thaliana clone 31039 mRNA, complete sequence
Length = 1224
Score = 38.2 bits (77), Expect = 0.10
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3 / +1
Query: 45 LPWLYYHNVIGVSHFFLLVEG 107
LPWL+YH V G HFF L +G
Sbjct: 1012 LPWLHYHEVAGGGHFFPLAKG 1074
>gb|BT009662.1| Arabidopsis thaliana At1g74300 gene, complete cds
Length = 1041
Score = 38.2 bits (77), Expect = 0.10
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3 / +1
Query: 45 LPWLYYHNVIGVSHFFLLVEG 107
LPWL+YH V G HFF L +G
Sbjct: 940 LPWLHYHEVAGGGHFFPLAKG 1002
>gb|AC020579.5|AC020579 Arabidopsis thaliana chromosome 1 BAC F1O17 genomic sequence, complete
sequence
Length = 50821
Score = 38.2 bits (77), Expect = 0.10
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3 / -1
Query: 45 LPWLYYHNVIGVSHFFLLVEG 107
LPWL+YH V G HFF L +G
Sbjct: 16582 LPWLHYHEVAGGGHFFPLAKG 16520
>gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom arm complete sequence
Length = 14668883
Score = 38.2 bits (77), Expect = 0.10
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3 / +2
Query: 45 LPWLYYHNVIGVSHFFLLVEG 107
LPWL+YH V G HFF L +G
Sbjct: 12177692 LPWLHYHEVAGGGHFFPLAKG 12177754
>ref|NM_106090.2| Arabidopsis thaliana catalytic AT1G74300 mRNA, complete cds
Length = 1626
Score = 38.2 bits (77), Expect = 0.10
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3 / +2
Query: 45 LPWLYYHNVIGVSHFFLLVEG 107
LPWL+YH V G HFF L +G
Sbjct: 1010 LPWLHYHEVAGGGHFFPLAKG 1072
>ref|NM_106091.2| Arabidopsis thaliana ATHSP101 (HEAT SHOCK PROTEIN 101); ATP binding /
ATPase/ nucleoside-triphosphatase/ nucleotide binding /
protein binding AT1G74310 (ATHSP101) mRNA, complete cds
Length = 3737
Score = 38.2 bits (77), Expect = 0.10
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3 / -3
Query: 45 LPWLYYHNVIGVSHFFLLVEG 107
LPWL+YH V G HFF L +G
Sbjct: 3300 LPWLHYHEVAGGGHFFPLAKG 3238
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 38.2 bits (77), Expect = 0.10
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3 / +2
Query: 45 LPWLYYHNVIGVSHFFLLVEG 107
LPWL+YH V G HFF L +G
Sbjct: 27940034 LPWLHYHEVAGGGHFFPLAKG 27940096
>gb|BP568681.1|BP568681 BP568681 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-63-B22 3',
mRNA sequence
Length = 454
Score = 34.5 bits (69), Expect = 1.3
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3 / -1
Query: 45 LPWLYYHNVIGVSHFFLLVEG 107
LPWL+YH V HFF L +G
Sbjct: 229 LPWLHYHEVARGGHFFPLAKG 167
>gb|B67945.1|B67945 T25D10TR TAMU Arabidopsis thaliana genomic clone T25D10, DNA
sequence
Length = 629
Score = 34.1 bits (68), Expect = 1.8
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3 / +3
Query: 45 LPWLYYHNVIGVSHFFLLVEGEAAK 119
LPW+ YH + G HF VEG K
Sbjct: 24 LPWIRYHEISGSGHFVPFVEGMTDK 98
>gb|AV810278.1|AV810278 AV810278 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-63-E13 3',
mRNA sequence
Length = 429
Score = 34.1 bits (68), Expect = 1.8
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3 / -1
Query: 45 LPWLYYHNVIGVSHFFLLVEGEAAK 119
LPW+ YH + G HF VEG K
Sbjct: 222 LPWIRYHEISGSGHFVPFVEGMTDK 148
>gb|AY065282.1| Arabidopsis thaliana unknown protein (At3g48410) mRNA, complete cds
Length = 1346
Score = 34.1 bits (68), Expect = 1.8
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3 / +2
Query: 45 LPWLYYHNVIGVSHFFLLVEGEAAK 119
LPW+ YH + G HF VEG K
Sbjct: 1109 LPWIRYHEISGSGHFVPFVEGMTDK 1183
>emb|BX823905.1|CNS0A6MQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS90ZF02 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1290
Score = 34.1 bits (68), Expect = 1.8
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3 / +1
Query: 45 LPWLYYHNVIGVSHFFLLVEGEAAK 119
LPW+ YH + G HF VEG K
Sbjct: 1096 LPWIRYHEISGSGHFVPFVEGMTDK 1170
>emb|AL049659.2|ATT29H11 Arabidopsis thaliana DNA chromosome 3, BAC clone T29H11
Length = 97488
Score = 34.1 bits (68), Expect = 1.8
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3 / -3
Query: 45 LPWLYYHNVIGVSHFFLLVEGEAAK 119
LPW+ YH + G HF VEG K
Sbjct: 58555 LPWIRYHEISGSGHFVPFVEGMTDK 58481
>ref|NM_114700.2| Arabidopsis thaliana catalytic/ hydrolase AT3G48410 mRNA, complete
cds
Length = 1330
Score = 34.1 bits (68), Expect = 1.8
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3 / +2
Query: 45 LPWLYYHNVIGVSHFFLLVEGEAAK 119
LPW+ YH + G HF VEG K
Sbjct: 1109 LPWIRYHEISGSGHFVPFVEGMTDK 1183
>emb|BX825580.1|CNS0A4U7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL45ZH12 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 902
Score = 33.6 bits (67), Expect = 2.4
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3 / +2
Query: 45 LPWLYYHNVIGVSHFFLLVEG 107
LPW+ YH + G HF VEG
Sbjct: 713 LPWIRYHEISGSGHFVPFVEG 775
>gb|Z25707.1|Z25707 ATTS1172 Versailles-VC Arabidopsis thaliana cDNA clone VCVDB03,
mRNA sequence
Length = 299
Score = 31.8 bits (63), Expect = 8.6
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +3 / +2
Query: 45 LPWLYYHNVIGVSHFFLLVEG 107
LPW++YH + G H F G
Sbjct: 62 LPWIHYHEIPGAGHLFPFAPG 124
>gb|AA650747.1|AA650747 30861 Lambda-PRL2 Arabidopsis thaliana cDNA clone 281F11T7, mRNA
sequence
Length = 444
Score = 31.8 bits (63), Expect = 8.6
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +3 / +3
Query: 45 LPWLYYHNVIGVSHFFLLVEG 107
LPW++YH + G H F G
Sbjct: 198 LPWIHYHEIPGAGHLFPFAPG 260
>gb|AA713284.1|AA713284 32844 Lambda-PRL2 Arabidopsis thaliana cDNA clone 248H24T7, mRNA
sequence
Length = 563
Score = 31.8 bits (63), Expect = 8.6
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +3 / +2
Query: 45 LPWLYYHNVIGVSHFFLLVEG 107
LPW++YH + G H F G
Sbjct: 296 LPWIHYHEIPGAGHLFPFAPG 358
>gb|T44324.1|T44324 7587 Lambda-PRL2 Arabidopsis thaliana cDNA clone 124F15T7, mRNA
sequence
Length = 387
Score = 31.8 bits (63), Expect = 8.6
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +3 / +3
Query: 45 LPWLYYHNVIGVSHFFLLVEG 107
LPW++YH + G H F G
Sbjct: 201 LPWIHYHEIPGAGHLFPFAXG 263
>gb|AU226608.1|AU226608 AU226608 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-48-G10 3',
mRNA sequence
Length = 434
Score = 31.8 bits (63), Expect = 8.6
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +3 / -1
Query: 45 LPWLYYHNVIGVSHFFLLVEG 107
LPW++YH + G H F G
Sbjct: 278 LPWIHYHEIPGAGHLFPFAPG 216
>gb|CF652146.1|CF652146 37-L020135-066-001-I09-SP6P MPIZ-ADIS-066 Arabidopsis thaliana cDNA
clone MPIZp2001I091Q 5-PRIME, mRNA sequence
Length = 532
Score = 31.8 bits (63), Expect = 8.6
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +3 / +2
Query: 45 LPWLYYHNVIGVSHFFLLVEG 107
LPW++YH + G H F G
Sbjct: 191 LPWIHYHEIPGAGHLFPFAPG 253
>gb|CF652147.1|CF652147 37-L020135w-066-001-I09-SP6P MPIZ-ADIS-066 Arabidopsis thaliana
cDNA clone MPIZp2001I091Q 5-PRIME, mRNA sequence
Length = 613
Score = 31.8 bits (63), Expect = 8.6
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +3 / +2
Query: 45 LPWLYYHNVIGVSHFFLLVEG 107
LPW++YH + G H F G
Sbjct: 191 LPWIHYHEIPGAGHLFPFAPG 253
>gb|AV439563.1|AV439563 AV439563 Arabidopsis thaliana above-ground organ two to six-week
old Arabidopsis thaliana cDNA clone APD05g05_f 3', mRNA
sequence
Length = 560
Score = 31.8 bits (63), Expect = 8.6
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +3 / -3
Query: 45 LPWLYYHNVIGVSHFFLLVEG 107
LPW++YH + G H F G
Sbjct: 213 LPWIHYHEIPGAGHLFPFAPG 151
>gb|AV539389.1|AV539389 AV539389 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ131b05F 3', mRNA sequence
Length = 614
Score = 31.8 bits (63), Expect = 8.6
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +3 / -3
Query: 45 LPWLYYHNVIGVSHFFLLVEG 107
LPW++YH + G H F G
Sbjct: 357 LPWIHYHEIPGAGHLFPFAPG 295
>gb|BP563711.1|BP563711 BP563711 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-04-C23 3',
mRNA sequence
Length = 422
Score = 31.8 bits (63), Expect = 8.6
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3 / -2
Query: 45 LPWLYYHNVIGVSHFFLLVEG 107
LPWL+YH V HFF +G
Sbjct: 241 LPWLHYHEVPRSGHFFHYTKG 179
>gb|BP628262.1|BP628262 BP628262 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-11-M16 3',
mRNA sequence
Length = 339
Score = 31.8 bits (63), Expect = 8.6
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +3 / -3
Query: 45 LPWLYYHNVIGVSHFFLLVEG 107
LPW++YH + G H F G
Sbjct: 277 LPWIHYHEIPGAGHLFPFAPG 215
>gb|BP634433.1|BP634433 BP634433 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-34-G11 3',
mRNA sequence
Length = 440
Score = 31.8 bits (63), Expect = 8.6
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +3 / -2
Query: 45 LPWLYYHNVIGVSHFFLLVEG 107
LPW++YH + G H F G
Sbjct: 316 LPWIHYHEIPGAGHLFPFAPG 254
>gb|BT004617.1| Arabidopsis thaliana At2g36290 gene, complete cds
Length = 1173
Score = 31.8 bits (63), Expect = 8.6
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +3 / +1
Query: 45 LPWLYYHNVIGVSHFFLLVEG 107
LPW++YH + G H F G
Sbjct: 1057 LPWIHYHEIPGAGHLFPFAPG 1119
>gb|AY089174.1| Arabidopsis thaliana clone 5167 mRNA, complete sequence
Length = 1356
Score = 31.8 bits (63), Expect = 8.6
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +3 / +3
Query: 45 LPWLYYHNVIGVSHFFLLVEG 107
LPW++YH + G H F G
Sbjct: 1041 LPWIHYHEIPGAGHLFPFAPG 1103
>gb|AC006921.6| Arabidopsis thaliana chromosome 2 clone F2H17 map g6825, complete
sequence
Length = 91354
Score = 31.8 bits (63), Expect = 8.6
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +3 / +3
Query: 45 LPWLYYHNVIGVSHFFLLVEG 107
LPW++YH + G H F G
Sbjct: 54705 LPWIHYHEIPGAGHLFPFAPG 54767
>emb|BX820927.1|CNS0A9MX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH82ZD02 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1319
Score = 31.8 bits (63), Expect = 8.6
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +3 / +1
Query: 45 LPWLYYHNVIGVSHFFLLVEG 107
LPW++YH + G H F G
Sbjct: 1042 LPWIHYHEIPGAGHLFPFAPG 1104
>ref|NM_129186.2| Arabidopsis thaliana catalytic/ hydrolase AT2G36290 mRNA, complete
cds
Length = 1406
Score = 31.8 bits (63), Expect = 8.6
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +3 / +3
Query: 45 LPWLYYHNVIGVSHFFLLVEG 107
LPW++YH + G H F G
Sbjct: 1050 LPWIHYHEIPGAGHLFPFAPG 1112
>gb|BP858562.1|BP858562 BP858562 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-37-L10 5',
mRNA sequence
Length = 383
Score = 24.9 bits (48), Expect(2) = 8.7
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1 / +2
Query: 19 AHLLAYTRFFHGCIITMSLVFHISFY*LKERL 114
A ++ R H C+I L+ + *LK+RL
Sbjct: 218 AVVMGTMRLHHKCLILYQLLMKLLLI*LKQRL 313
Score = 22.6 bits (43), Expect(2) = 8.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1 / +3
Query: 124 LXPLFLNLFSRIWNE 168
L LF LFSRIW +
Sbjct: 315 LRELFF*LFSRIWGK 359
Database: At_nucl_with_EST.fasta
Posted date: May 2, 2006 2:53 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 469,763,266
Number of Sequences: 1013581
Number of extensions: 4243236
Number of successful extensions: 130879
Number of sequences better than 10.0: 75
length of database: 302,980,290
effective HSP length: 53
effective length of database: 249,260,497
effective search space used: 15703411311
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)