TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAD12g05.sg.3.2
(900 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|NM_101859.2| Arabidopsis thaliana HYD1 AT1G20050 (HYD1)... 262 8e-081
gb|AF030357.1|AF030357 Arabidopsis thaliana C-8,7 sterol is... 262 8e-081
gb|AY086087.1| Arabidopsis thaliana clone 2121 mRNA, comple... 262 8e-081
emb|AX506025.1| Sequence 720 from Patent WO0216655 262 8e-081
gb|AF334733.1| Arabidopsis thaliana clone C00176 (e) putati... 262 8e-081
gb|CB264432.1|CB264432 64-E014994-035-003-O16-T7R MPIZ-ADIS... 262 1e-080
gb|U81498.1|ATU81498 Arabidopsis thaliana phenylalkylamine ... 261 2e-080
emb|BX818412.1|CNS0AB43 Arabidopsis thaliana Full-length cD... 257 6e-078
emb|BX841880.1|CNS09Y3Z Arabidopsis thaliana Full-length cD... 232 9e-072
emb|BX814690.1|CNS0AEAQ Arabidopsis thaliana Full-length cD... 230 5e-071
gb|AC022472.2|T20H2 Sequence of BAC T20H2 from Arabidopsis ... 119 7e-062
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 119 2e-057
gb|AI998831.1|AI998831 701547050 A. thaliana, Columbia Col-... 202 1e-050
gb|BE523928.1|BE523928 M43F2STM Arabidopsis developing seed... 126 4e-040
gb|BP845881.1|BP845881 BP845881 RAFL21 Arabidopsis thaliana... 108 1e-035
gb|BP857462.1|BP857462 BP857462 RAFL21 Arabidopsis thaliana... 103 4e-033
gb|BP843443.1|BP843443 BP843443 RAFL21 Arabidopsis thaliana... 102 1e-029
gb|AU236348.1|AU236348 AU236348 RAFL14 Arabidopsis thaliana... 93 3e-029
gb|BP799358.1|BP799358 BP799358 RAFL14 Arabidopsis thaliana... 60 2e-027
gb|BP843458.1|BP843458 BP843458 RAFL21 Arabidopsis thaliana... 82 1e-026
gb|BP571775.1|BP571775 BP571775 RAFL14 Arabidopsis thaliana... 122 1e-026
gb|CW799441.1|CW799441 WiscDsLox337D01 Arabidopsis thaliana... 120 8e-026
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 119 1e-025
gb|BP822592.1|BP822592 BP822592 RAFL19 Arabidopsis thaliana... 66 3e-024
gb|BP576570.1|BP576570 BP576570 RAFL14 Arabidopsis thaliana... 110 6e-023
gb|BP592528.1|BP592528 BP592528 RAFL15 Arabidopsis thaliana... 65 2e-022
gb|T22967.1|T22967 4975 Lambda-PRL2 Arabidopsis thaliana cD... 66 4e-022
gb|BP576268.1|BP576268 BP576268 RAFL14 Arabidopsis thaliana... 103 7e-021
>ref|NM_101859.2| Arabidopsis thaliana HYD1 AT1G20050 (HYD1) mRNA, complete cds
Length = 947
Score = 262 bits (567), Expect(2) = 8e-081
Identities = 100/155 (64%), Positives = 125/155 (80%)
Frame = +1 / +2
Query: 259 SKTDRLLMCWWAFTGLTHIMIEGPFVFTPDFFKKENPNFFDEVWKEYSKGDSRYVARDTA 438
+K D+LLMCWW FTGLTH+++EG FVF+P+FFK + EVWKEYSKGDSRYV RD+A
Sbjct: 245 AKLDKLLMCWWTFTGLTHVILEGYFVFSPEFFKDNTSAYLAEVWKEYSKGDSRYVGRDSA 424
Query: 439 TVTVEGITAVLEGPASLLAVYAIASRKSFSHILQFAVCLGQLYGCLVYFITAYLDGFNFW 618
V+VEGITAV+ GPASLLA+YAIA KS+S++LQ A+ + QLYGCLVYFITA L+G NF
Sbjct: 425 VVSVEGITAVIVGPASLLAIYAIAKEKSYSYVLQLAISVCQLYGCLVYFITAILEGDNFA 604
Query: 619 VGPFYFWAYFIGANSFWIWIPMLIAIRSWKKTCAA 723
FY+++Y+IGAN +W+ IP LI+ R WKK CAA
Sbjct: 605 TNSFYYYSYYIGANCWWVLIPSLISFRCWKKICAA 709
Score = 129 bits (277), Expect(3) = 2e-038
Identities = 68/118 (57%), Positives = 75/118 (63%)
Frame = -2 / -3
Query: 614 KLKPSKYAVMK*TRHP*SWPRQTANWRMWLKDFLDAIA*TASSDAGPSNTAVIPSTVTVA 435
KL PSK AVMK*T+HP*SW + A+ L DF A+A* A +AGP+ TAVIPST T A
Sbjct: 600 KLSPSKIAVMK*TKHP*SWQTEIAS*ST*LYDFSLAMA*IARREAGPTITAVIPSTDTTA 421
Query: 434 VSLATYLESPLLYSFQTXXXXXXXXXXXXXGVKTKGPSIIMWVNPVNAHQHMSRRSVL 261
SL TYLESPLLYSFQT G KTK PS I V PVN HQH+S S L
Sbjct: 420 ESLPTYLESPLLYSFQTSAR*AEVLSLKNSGEKTK*PSRIT*VRPVNVHQHISNLSSL 247
Score = 61.1 bits (127), Expect(2) = 8e-081
Identities = 22/46 (47%), Positives = 32/46 (69%)
Frame = +1 / +2
Query: 109 MGHPYAPAELDLPGFVPLKLSQVEILVSYLGASVFVFLAVWLVSGR 246
+ HPY P +L+LPG+VP+ +S I+ YLG+S+ V VWL+ GR
Sbjct: 101 LAHPYVPRDLNLPGYVPISMSMSSIVSIYLGSSLLVVSLVWLLFGR 238
Score = 40.0 bits (81), Expect(3) = 2e-038
Identities = 20/44 (45%), Positives = 23/44 (52%)
Frame = -2 / -3
Query: 245 LPETSQTARKTKTEAPR*DTRISTWDSFSGTKPGRSSSAGA*GC 114
LP+ SQT T+ E PR* + D GT PGR S G GC
Sbjct: 237 LPKRSQTRETTRREEPR*IETMEDIDIEIGTYPGRFRSLGTYGC 106
Score = 30.4 bits (60), Expect(3) = 2e-038
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -2 / -3
Query: 722 AAQVFFQDLMAMSIGIQIQKLFAPM 648
AAQ+FFQ MS GI+ + APM
Sbjct: 708 AAQIFFQQRKEMSEGIKTHQQLAPM 634
>gb|AF030357.1|AF030357 Arabidopsis thaliana C-8,7 sterol isomerase mRNA, complete cds
Length = 933
Score = 262 bits (567), Expect(2) = 8e-081
Identities = 100/155 (64%), Positives = 125/155 (80%)
Frame = +1 / +3
Query: 259 SKTDRLLMCWWAFTGLTHIMIEGPFVFTPDFFKKENPNFFDEVWKEYSKGDSRYVARDTA 438
+K D+LLMCWW FTGLTH+++EG FVF+P+FFK + EVWKEYSKGDSRYV RD+A
Sbjct: 207 AKLDKLLMCWWTFTGLTHVILEGYFVFSPEFFKDNTSAYLAEVWKEYSKGDSRYVGRDSA 386
Query: 439 TVTVEGITAVLEGPASLLAVYAIASRKSFSHILQFAVCLGQLYGCLVYFITAYLDGFNFW 618
V+VEGITAV+ GPASLLA+YAIA KS+S++LQ A+ + QLYGCLVYFITA L+G NF
Sbjct: 387 VVSVEGITAVIVGPASLLAIYAIAKEKSYSYVLQLAISVCQLYGCLVYFITAILEGDNFA 566
Query: 619 VGPFYFWAYFIGANSFWIWIPMLIAIRSWKKTCAA 723
FY+++Y+IGAN +W+ IP LI+ R WKK CAA
Sbjct: 567 TNSFYYYSYYIGANCWWVLIPSLISFRCWKKICAA 671
Score = 129 bits (277), Expect(3) = 2e-038
Identities = 68/118 (57%), Positives = 75/118 (63%)
Frame = -2 / -3
Query: 614 KLKPSKYAVMK*TRHP*SWPRQTANWRMWLKDFLDAIA*TASSDAGPSNTAVIPSTVTVA 435
KL PSK AVMK*T+HP*SW + A+ L DF A+A* A +AGP+ TAVIPST T A
Sbjct: 562 KLSPSKIAVMK*TKHP*SWQTEIAS*ST*LYDFSLAMA*IARREAGPTITAVIPSTDTTA 383
Query: 434 VSLATYLESPLLYSFQTXXXXXXXXXXXXXGVKTKGPSIIMWVNPVNAHQHMSRRSVL 261
SL TYLESPLLYSFQT G KTK PS I V PVN HQH+S S L
Sbjct: 382 ESLPTYLESPLLYSFQTSAR*AEVLSLKNSGEKTK*PSRIT*VRPVNVHQHISNLSSL 209
Score = 61.1 bits (127), Expect(2) = 8e-081
Identities = 22/46 (47%), Positives = 32/46 (69%)
Frame = +1 / +3
Query: 109 MGHPYAPAELDLPGFVPLKLSQVEILVSYLGASVFVFLAVWLVSGR 246
+ HPY P +L+LPG+VP+ +S I+ YLG+S+ V VWL+ GR
Sbjct: 63 LAHPYVPRDLNLPGYVPISMSMSSIVSIYLGSSLLVVSLVWLLFGR 200
Score = 40.0 bits (81), Expect(3) = 2e-038
Identities = 20/44 (45%), Positives = 23/44 (52%)
Frame = -2 / -3
Query: 245 LPETSQTARKTKTEAPR*DTRISTWDSFSGTKPGRSSSAGA*GC 114
LP+ SQT T+ E PR* + D GT PGR S G GC
Sbjct: 199 LPKRSQTRETTRREEPR*IETMEDIDIEIGTYPGRFRSLGTYGC 68
Score = 30.4 bits (60), Expect(3) = 2e-038
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -2 / -3
Query: 722 AAQVFFQDLMAMSIGIQIQKLFAPM 648
AAQ+FFQ MS GI+ + APM
Sbjct: 670 AAQIFFQQRKEMSEGIKTHQQLAPM 596
>gb|AY086087.1| Arabidopsis thaliana clone 2121 mRNA, complete sequence
Length = 924
Score = 262 bits (567), Expect(2) = 8e-081
Identities = 100/155 (64%), Positives = 125/155 (80%)
Frame = +1 / +3
Query: 259 SKTDRLLMCWWAFTGLTHIMIEGPFVFTPDFFKKENPNFFDEVWKEYSKGDSRYVARDTA 438
+K D+LLMCWW FTGLTH+++EG FVF+P+FFK + EVWKEYSKGDSRYV RD+A
Sbjct: 246 AKLDKLLMCWWTFTGLTHVILEGYFVFSPEFFKDNTSAYLAEVWKEYSKGDSRYVGRDSA 425
Query: 439 TVTVEGITAVLEGPASLLAVYAIASRKSFSHILQFAVCLGQLYGCLVYFITAYLDGFNFW 618
V+VEGITAV+ GPASLLA+YAIA KS+S++LQ A+ + QLYGCLVYFITA L+G NF
Sbjct: 426 VVSVEGITAVIVGPASLLAIYAIAKEKSYSYVLQLAISVCQLYGCLVYFITAILEGDNFA 605
Query: 619 VGPFYFWAYFIGANSFWIWIPMLIAIRSWKKTCAA 723
FY+++Y+IGAN +W+ IP LI+ R WKK CAA
Sbjct: 606 TNSFYYYSYYIGANCWWVLIPSLISFRCWKKICAA 710
Score = 129 bits (277), Expect(3) = 2e-038
Identities = 68/118 (57%), Positives = 75/118 (63%)
Frame = -2 / -3
Query: 614 KLKPSKYAVMK*TRHP*SWPRQTANWRMWLKDFLDAIA*TASSDAGPSNTAVIPSTVTVA 435
KL PSK AVMK*T+HP*SW + A+ L DF A+A* A +AGP+ TAVIPST T A
Sbjct: 601 KLSPSKIAVMK*TKHP*SWQTEIAS*ST*LYDFSLAMA*IARREAGPTITAVIPSTDTTA 422
Query: 434 VSLATYLESPLLYSFQTXXXXXXXXXXXXXGVKTKGPSIIMWVNPVNAHQHMSRRSVL 261
SL TYLESPLLYSFQT G KTK PS I V PVN HQH+S S L
Sbjct: 421 ESLPTYLESPLLYSFQTSAR*AEVLSLKNSGEKTK*PSRIT*VRPVNVHQHISNLSSL 248
Score = 61.1 bits (127), Expect(2) = 8e-081
Identities = 22/46 (47%), Positives = 32/46 (69%)
Frame = +1 / +3
Query: 109 MGHPYAPAELDLPGFVPLKLSQVEILVSYLGASVFVFLAVWLVSGR 246
+ HPY P +L+LPG+VP+ +S I+ YLG+S+ V VWL+ GR
Sbjct: 102 LAHPYVPRDLNLPGYVPISMSMSSIVSIYLGSSLLVVSLVWLLFGR 239
Score = 40.0 bits (81), Expect(3) = 2e-038
Identities = 20/44 (45%), Positives = 23/44 (52%)
Frame = -2 / -3
Query: 245 LPETSQTARKTKTEAPR*DTRISTWDSFSGTKPGRSSSAGA*GC 114
LP+ SQT T+ E PR* + D GT PGR S G GC
Sbjct: 238 LPKRSQTRETTRREEPR*IETMEDIDIEIGTYPGRFRSLGTYGC 107
Score = 30.4 bits (60), Expect(3) = 2e-038
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -2 / -3
Query: 722 AAQVFFQDLMAMSIGIQIQKLFAPM 648
AAQ+FFQ MS GI+ + APM
Sbjct: 709 AAQIFFQQRKEMSEGIKTHQQLAPM 635
>emb|AX506025.1| Sequence 720 from Patent WO0216655
Length = 672
Score = 262 bits (567), Expect(2) = 8e-081
Identities = 100/155 (64%), Positives = 125/155 (80%)
Frame = +1 / +1
Query: 259 SKTDRLLMCWWAFTGLTHIMIEGPFVFTPDFFKKENPNFFDEVWKEYSKGDSRYVARDTA 438
+K D+LLMCWW FTGLTH+++EG FVF+P+FFK + EVWKEYSKGDSRYV RD+A
Sbjct: 154 AKLDKLLMCWWTFTGLTHVILEGYFVFSPEFFKDNTSAYLAEVWKEYSKGDSRYVGRDSA 333
Query: 439 TVTVEGITAVLEGPASLLAVYAIASRKSFSHILQFAVCLGQLYGCLVYFITAYLDGFNFW 618
V+VEGITAV+ GPASLLA+YAIA KS+S++LQ A+ + QLYGCLVYFITA L+G NF
Sbjct: 334 VVSVEGITAVIVGPASLLAIYAIAKEKSYSYVLQLAISVCQLYGCLVYFITAILEGDNFA 513
Query: 619 VGPFYFWAYFIGANSFWIWIPMLIAIRSWKKTCAA 723
FY+++Y+IGAN +W+ IP LI+ R WKK CAA
Sbjct: 514 TNSFYYYSYYIGANCWWVLIPSLISFRCWKKICAA 618
Score = 129 bits (277), Expect(3) = 2e-038
Identities = 68/118 (57%), Positives = 75/118 (63%)
Frame = -2 / -2
Query: 614 KLKPSKYAVMK*TRHP*SWPRQTANWRMWLKDFLDAIA*TASSDAGPSNTAVIPSTVTVA 435
KL PSK AVMK*T+HP*SW + A+ L DF A+A* A +AGP+ TAVIPST T A
Sbjct: 509 KLSPSKIAVMK*TKHP*SWQTEIAS*ST*LYDFSLAMA*IARREAGPTITAVIPSTDTTA 330
Query: 434 VSLATYLESPLLYSFQTXXXXXXXXXXXXXGVKTKGPSIIMWVNPVNAHQHMSRRSVL 261
SL TYLESPLLYSFQT G KTK PS I V PVN HQH+S S L
Sbjct: 329 ESLPTYLESPLLYSFQTSAR*AEVLSLKNSGEKTK*PSRIT*VRPVNVHQHISNLSSL 156
Score = 61.1 bits (127), Expect(2) = 8e-081
Identities = 22/46 (47%), Positives = 32/46 (69%)
Frame = +1 / +1
Query: 109 MGHPYAPAELDLPGFVPLKLSQVEILVSYLGASVFVFLAVWLVSGR 246
+ HPY P +L+LPG+VP+ +S I+ YLG+S+ V VWL+ GR
Sbjct: 10 LAHPYVPRDLNLPGYVPISMSMSSIVSIYLGSSLLVVSLVWLLFGR 147
Score = 40.0 bits (81), Expect(3) = 2e-038
Identities = 20/44 (45%), Positives = 23/44 (52%)
Frame = -2 / -2
Query: 245 LPETSQTARKTKTEAPR*DTRISTWDSFSGTKPGRSSSAGA*GC 114
LP+ SQT T+ E PR* + D GT PGR S G GC
Sbjct: 146 LPKRSQTRETTRREEPR*IETMEDIDIEIGTYPGRFRSLGTYGC 15
Score = 30.4 bits (60), Expect(3) = 2e-038
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -2 / -2
Query: 722 AAQVFFQDLMAMSIGIQIQKLFAPM 648
AAQ+FFQ MS GI+ + APM
Sbjct: 617 AAQIFFQQRKEMSEGIKTHQQLAPM 543
>gb|AF334733.1| Arabidopsis thaliana clone C00176 (e) putative C-8,7 sterol
isomerase (At1g20050) mRNA, complete cds
Length = 672
Score = 262 bits (567), Expect(2) = 8e-081
Identities = 100/155 (64%), Positives = 125/155 (80%)
Frame = +1 / +1
Query: 259 SKTDRLLMCWWAFTGLTHIMIEGPFVFTPDFFKKENPNFFDEVWKEYSKGDSRYVARDTA 438
+K D+LLMCWW FTGLTH+++EG FVF+P+FFK + EVWKEYSKGDSRYV RD+A
Sbjct: 154 AKLDKLLMCWWTFTGLTHVILEGYFVFSPEFFKDNTSAYLAEVWKEYSKGDSRYVGRDSA 333
Query: 439 TVTVEGITAVLEGPASLLAVYAIASRKSFSHILQFAVCLGQLYGCLVYFITAYLDGFNFW 618
V+VEGITAV+ GPASLLA+YAIA KS+S++LQ A+ + QLYGCLVYFITA L+G NF
Sbjct: 334 VVSVEGITAVIVGPASLLAIYAIAKEKSYSYVLQLAISVCQLYGCLVYFITAILEGDNFA 513
Query: 619 VGPFYFWAYFIGANSFWIWIPMLIAIRSWKKTCAA 723
FY+++Y+IGAN +W+ IP LI+ R WKK CAA
Sbjct: 514 TNSFYYYSYYIGANCWWVLIPSLISFRCWKKICAA 618
Score = 129 bits (277), Expect(3) = 2e-038
Identities = 68/118 (57%), Positives = 75/118 (63%)
Frame = -2 / -2
Query: 614 KLKPSKYAVMK*TRHP*SWPRQTANWRMWLKDFLDAIA*TASSDAGPSNTAVIPSTVTVA 435
KL PSK AVMK*T+HP*SW + A+ L DF A+A* A +AGP+ TAVIPST T A
Sbjct: 509 KLSPSKIAVMK*TKHP*SWQTEIAS*ST*LYDFSLAMA*IARREAGPTITAVIPSTDTTA 330
Query: 434 VSLATYLESPLLYSFQTXXXXXXXXXXXXXGVKTKGPSIIMWVNPVNAHQHMSRRSVL 261
SL TYLESPLLYSFQT G KTK PS I V PVN HQH+S S L
Sbjct: 329 ESLPTYLESPLLYSFQTSAR*AEVLSLKNSGEKTK*PSRIT*VRPVNVHQHISNLSSL 156
Score = 61.1 bits (127), Expect(2) = 8e-081
Identities = 22/46 (47%), Positives = 32/46 (69%)
Frame = +1 / +1
Query: 109 MGHPYAPAELDLPGFVPLKLSQVEILVSYLGASVFVFLAVWLVSGR 246
+ HPY P +L+LPG+VP+ +S I+ YLG+S+ V VWL+ GR
Sbjct: 10 LAHPYVPRDLNLPGYVPISMSMSSIVSIYLGSSLLVVSLVWLLFGR 147
Score = 40.0 bits (81), Expect(3) = 2e-038
Identities = 20/44 (45%), Positives = 23/44 (52%)
Frame = -2 / -2
Query: 245 LPETSQTARKTKTEAPR*DTRISTWDSFSGTKPGRSSSAGA*GC 114
LP+ SQT T+ E PR* + D GT PGR S G GC
Sbjct: 146 LPKRSQTRETTRREEPR*IETMEDIDIEIGTYPGRFRSLGTYGC 15
Score = 30.4 bits (60), Expect(3) = 2e-038
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -2 / -2
Query: 722 AAQVFFQDLMAMSIGIQIQKLFAPM 648
AAQ+FFQ MS GI+ + APM
Sbjct: 617 AAQIFFQQRKEMSEGIKTHQQLAPM 543
>gb|CB264432.1|CB264432 64-E014994-035-003-O16-T7R MPIZ-ADIS-035 Arabidopsis thaliana cDNA
clone MPIZp2000O163Q 5-PRIME, mRNA sequence
Length = 647
Score = 262 bits (566), Expect(2) = 1e-080
Identities = 100/154 (64%), Positives = 124/154 (80%)
Frame = +1 / +3
Query: 262 KTDRLLMCWWAFTGLTHIMIEGPFVFTPDFFKKENPNFFDEVWKEYSKGDSRYVARDTAT 441
K D+LLMCWW FTGLTH+++EG FVF+P+FFK + EVWKEYSKGDSRYV RD+A
Sbjct: 177 KLDKLLMCWWTFTGLTHVILEGYFVFSPEFFKDNTSAYLAEVWKEYSKGDSRYVGRDSAV 356
Query: 442 VTVEGITAVLEGPASLLAVYAIASRKSFSHILQFAVCLGQLYGCLVYFITAYLDGFNFWV 621
V+VEGITAV+ GPASLLA+YAIA KS+S++LQ A+ + QLYGCLVYFITA L+G NF
Sbjct: 357 VSVEGITAVIVGPASLLAIYAIAKEKSYSYVLQLAISVCQLYGCLVYFITAILEGDNFAT 536
Query: 622 GPFYFWAYFIGANSFWIWIPMLIAIRSWKKTCAA 723
FY+++Y+IGAN +W+ IP LI+ R WKK CAA
Sbjct: 537 NSFYYYSYYIGANCWWVLIPSLISFRCWKKICAA 638
Score = 129 bits (277), Expect(3) = 2e-038
Identities = 68/118 (57%), Positives = 75/118 (63%)
Frame = -2 / -2
Query: 614 KLKPSKYAVMK*TRHP*SWPRQTANWRMWLKDFLDAIA*TASSDAGPSNTAVIPSTVTVA 435
KL PSK AVMK*T+HP*SW + A+ L DF A+A* A +AGP+ TAVIPST T A
Sbjct: 529 KLSPSKIAVMK*TKHP*SWQTEIAS*ST*LYDFSLAMA*IARREAGPTITAVIPSTDTTA 350
Query: 434 VSLATYLESPLLYSFQTXXXXXXXXXXXXXGVKTKGPSIIMWVNPVNAHQHMSRRSVL 261
SL TYLESPLLYSFQT G KTK PS I V PVN HQH+S S L
Sbjct: 349 ESLPTYLESPLLYSFQTSAR*AEVLSLKNSGEKTK*PSRIT*VRPVNVHQHISNLSSL 176
Score = 61.1 bits (127), Expect(2) = 1e-080
Identities = 22/46 (47%), Positives = 32/46 (69%)
Frame = +1 / +3
Query: 109 MGHPYAPAELDLPGFVPLKLSQVEILVSYLGASVFVFLAVWLVSGR 246
+ HPY P +L+LPG+VP+ +S I+ YLG+S+ V VWL+ GR
Sbjct: 30 LAHPYVPRDLNLPGYVPISMSMSSIVSIYLGSSLLVVSLVWLLFGR 167
Score = 40.0 bits (81), Expect(3) = 2e-038
Identities = 20/44 (45%), Positives = 23/44 (52%)
Frame = -2 / -2
Query: 245 LPETSQTARKTKTEAPR*DTRISTWDSFSGTKPGRSSSAGA*GC 114
LP+ SQT T+ E PR* + D GT PGR S G GC
Sbjct: 166 LPKRSQTRETTRREEPR*IETMEDIDIEIGTYPGRFRSLGTYGC 35
Score = 30.4 bits (60), Expect(3) = 2e-038
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -2 / -2
Query: 722 AAQVFFQDLMAMSIGIQIQKLFAPM 648
AAQ+FFQ MS GI+ + APM
Sbjct: 637 AAQIFFQQRKEMSEGIKTHQQLAPM 563
>gb|U81498.1|ATU81498 Arabidopsis thaliana phenylalkylamine binding protein homolog mRNA,
complete cds
Length = 920
Score = 261 bits (564), Expect(2) = 2e-080
Identities = 99/155 (63%), Positives = 125/155 (80%)
Frame = +1 / +1
Query: 259 SKTDRLLMCWWAFTGLTHIMIEGPFVFTPDFFKKENPNFFDEVWKEYSKGDSRYVARDTA 438
+K D+LLMCWW FTGLTH+++EG FVF+P+FFK + EVWKEYSKGDSRYV RD+A
Sbjct: 202 AKLDKLLMCWWTFTGLTHVILEGYFVFSPEFFKDNTSAYLAEVWKEYSKGDSRYVGRDSA 381
Query: 439 TVTVEGITAVLEGPASLLAVYAIASRKSFSHILQFAVCLGQLYGCLVYFITAYLDGFNFW 618
V+VEGITAV+ GPASLLA+YAIA KS+S++LQ A+ + QLYGC+VYFITA L+G NF
Sbjct: 382 VVSVEGITAVIVGPASLLAIYAIAKEKSYSYVLQLAISVCQLYGCVVYFITAILEGDNFA 561
Query: 619 VGPFYFWAYFIGANSFWIWIPMLIAIRSWKKTCAA 723
FY+++Y+IGAN +W+ IP LI+ R WKK CAA
Sbjct: 562 TNSFYYYSYYIGANCWWVLIPSLISFRCWKKICAA 666
Score = 150 bits (322), Expect(2) = 6e-041
Identities = 83/154 (53%), Positives = 92/154 (59%)
Frame = -2 / -1
Query: 722 AAQVFFQDLMAMSIGIQIQKLFAPMKYAQK*NGPTQKLKPSKYAVMK*TRHP*SWPRQTA 543
AAQ+FFQ MS GI+ + APM Y * KL PSK AVMK*T HP*SW + A
Sbjct: 665 AAQIFFQQRKEMSEGIKTHQQLAPM*YE***KEFVAKLSPSKIAVMK*TTHP*SWQTEIA 486
Query: 542 NWRMWLKDFLDAIA*TASSDAGPSNTAVIPSTVTVAVSLATYLESPLLYSFQTXXXXXXX 363
+ L DF A+A* A +AGP+ TAVIPST T A SL TYLESPLLYSFQT
Sbjct: 485 S*ST*LYDFSLAMA*IARREAGPTITAVIPSTDTTAESLPTYLESPLLYSFQTSAR*AEV 306
Query: 362 XXXXXXGVKTKGPSIIMWVNPVNAHQHMSRRSVL 261
G KTK PS I V PVN HQH+S S L
Sbjct: 305 LSLKNSGEKTK*PSRIT*VRPVNVHQHISNLSSL 204
Score = 61.1 bits (127), Expect(2) = 2e-080
Identities = 22/46 (47%), Positives = 32/46 (69%)
Frame = +1 / +1
Query: 109 MGHPYAPAELDLPGFVPLKLSQVEILVSYLGASVFVFLAVWLVSGR 246
+ HPY P +L+LPG+VP+ +S I+ YLG+S+ V VWL+ GR
Sbjct: 58 LAHPYVPRDLNLPGYVPISMSMSSIVSIYLGSSLLVVSLVWLLFGR 195
Score = 40.0 bits (81), Expect(2) = 6e-041
Identities = 20/44 (45%), Positives = 23/44 (52%)
Frame = -2 / -1
Query: 245 LPETSQTARKTKTEAPR*DTRISTWDSFSGTKPGRSSSAGA*GC 114
LP+ SQT T+ E PR* + D GT PGR S G GC
Sbjct: 194 LPKRSQTRETTRREEPR*IETMEDIDIEIGTYPGRFRSLGTYGC 63
>emb|BX818412.1|CNS0AB43 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL77ZH10 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 869
Score = 257 bits (556), Expect(2) = 6e-078
Identities = 99/155 (63%), Positives = 124/155 (80%)
Frame = +1 / +1
Query: 259 SKTDRLLMCWWAFTGLTHIMIEGPFVFTPDFFKKENPNFFDEVWKEYSKGDSRYVARDTA 438
+K D+LLM WW FTGLTH+++EG FVF+P+FFK + EVWKEYSKGDSRYV RD+A
Sbjct: 187 AKLDKLLMFWWTFTGLTHVILEGYFVFSPEFFKDNTSAYLAEVWKEYSKGDSRYVGRDSA 366
Query: 439 TVTVEGITAVLEGPASLLAVYAIASRKSFSHILQFAVCLGQLYGCLVYFITAYLDGFNFW 618
V+VEGITAV+ GPASLLA+YAIA KS+S++LQ A+ + QLYGCLVYFITA L+G NF
Sbjct: 367 VVSVEGITAVIVGPASLLAIYAIAKEKSYSYVLQLAISVCQLYGCLVYFITAILEGDNFA 546
Query: 619 VGPFYFWAYFIGANSFWIWIPMLIAIRSWKKTCAA 723
FY+++Y+IGAN +W+ IP LI+ R WKK CAA
Sbjct: 547 TNSFYYYSYYIGANCWWVLIPSLISFRCWKKICAA 651
Score = 126 bits (270), Expect(3) = 3e-036
Identities = 67/118 (56%), Positives = 75/118 (63%)
Frame = -2 / -1
Query: 614 KLKPSKYAVMK*TRHP*SWPRQTANWRMWLKDFLDAIA*TASSDAGPSNTAVIPSTVTVA 435
KL PSK AVMK*T+HP*SW + A+ L DF A+A* A +AGP+ TAVIPST T A
Sbjct: 542 KLSPSKIAVMK*TKHP*SWQTEIAS*ST*LYDFSLAMA*IARREAGPTITAVIPSTDTTA 363
Query: 434 VSLATYLESPLLYSFQTXXXXXXXXXXXXXGVKTKGPSIIMWVNPVNAHQHMSRRSVL 261
SL TYLESPLLYSFQT G KTK PS I V PVN HQ++S S L
Sbjct: 362 ESLPTYLESPLLYSFQTSAR*AEVLSLKNSGEKTK*PSRIT*VRPVNVHQNISNLSSL 189
Score = 56.5 bits (117), Expect(2) = 6e-078
Identities = 21/43 (48%), Positives = 30/43 (69%)
Frame = +1 / +1
Query: 118 PYAPAELDLPGFVPLKLSQVEILVSYLGASVFVFLAVWLVSGR 246
PY P +L+LPG+VP+ +S I+ YLG+S+ V VWL+ GR
Sbjct: 52 PYVPRDLNLPGYVPISMSMSSIVSIYLGSSLLVVSLVWLLFGR 180
Score = 35.9 bits (72), Expect(3) = 3e-036
Identities = 19/43 (44%), Positives = 22/43 (51%)
Frame = -2 / -1
Query: 245 LPETSQTARKTKTEAPR*DTRISTWDSFSGTKPGRSSSAGA*G 117
LP+ SQT T+ E PR* + D GT PGR S G G
Sbjct: 179 LPKRSQTRETTRREEPR*IETMEDIDIEIGTYPGRFRSLGTYG 51
Score = 30.4 bits (60), Expect(3) = 3e-036
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -2 / -1
Query: 722 AAQVFFQDLMAMSIGIQIQKLFAPM 648
AAQ+FFQ MS GI+ + APM
Sbjct: 650 AAQIFFQQRKEMSEGIKTHQQLAPM 576
>emb|BX841880.1|CNS09Y3Z Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH87ZC04 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 849
Score = 232 bits (501), Expect(2) = 9e-072
Identities = 94/155 (60%), Positives = 117/155 (75%)
Frame = +1 / +1
Query: 259 SKTDRLLMCWWAFTGLTHIMIEGPFVFTPDFFKKENPNFFDEVWKEYSKGDSRYVARDTA 438
+K D+LLM WW FTGLTH+++EG FVF+P+FFK + EVWKEYSKGDSRYV RD+A
Sbjct: 184 AKLDKLLMYWWTFTGLTHVILEGYFVFSPEFFKDNTSAYLAEVWKEYSKGDSRYVGRDSA 363
Query: 439 TVTVEGITAVLEGPASLLAVYAIASRKSFSHILQFAVCLGQLYGCLVYFITAYLDGFNFW 618
V+ EGITAV+ GPASLLA+YAI KS+S++LQ A+ + QLYGCLVYFITA L+G NF
Sbjct: 364 VVSFEGITAVIVGPASLLAIYAITKEKSYSYVLQLAISVCQLYGCLVYFITAILEGDNFA 543
Query: 619 VGPFYFWAYFIGANSFWIWIPMLIAIRSWKKTCAA 723
F +A IGAN +W+ IP LI+ R KK C+A
Sbjct: 544 TNSFDDYADDIGANFWWVVIPSLISFRCGKKNCSA 648
Score = 136 bits (292), Expect(2) = 8e-037
Identities = 77/154 (50%), Positives = 86/154 (55%)
Frame = -2 / -2
Query: 722 AAQVFFQDLMAMSIGIQIQKLFAPMKYAQK*NGPTQKLKPSKYAVMK*TRHP*SWPRQTA 543
A Q FF MS GI + APM A KL PSK AVMK*T+HP*SW + A
Sbjct: 647 AEQFFFPQRKEMSEGITTHQKLAPMSSA*SSKEFVAKLSPSKIAVMK*TKHP*SWQTEIA 468
Query: 542 NWRMWLKDFLDAIA*TASSDAGPSNTAVIPSTVTVAVSLATYLESPLLYSFQTXXXXXXX 363
+ L DF +A* A +AGP+ TAVIPS T A SL TYLESPLLYSFQT
Sbjct: 467 S*ST*LYDFSFVMA*IARREAGPTITAVIPSKDTTAESLPTYLESPLLYSFQTSAR*AEV 288
Query: 362 XXXXXXGVKTKGPSIIMWVNPVNAHQHMSRRSVL 261
G KTK PS I V PVN HQ++S S L
Sbjct: 287 LSLKNSGEKTK*PSRIT*VRPVNVHQYISNLSSL 186
Score = 61.1 bits (127), Expect(2) = 9e-072
Identities = 22/46 (47%), Positives = 32/46 (69%)
Frame = +1 / +1
Query: 109 MGHPYAPAELDLPGFVPLKLSQVEILVSYLGASVFVFLAVWLVSGR 246
+ HPY P +L+LPG+VP+ +S I+ YLG+S+ V VWL+ GR
Sbjct: 40 LAHPYVPRDLNLPGYVPISMSMSSIVSIYLGSSLLVVSLVWLLFGR 177
Score = 40.0 bits (81), Expect(2) = 8e-037
Identities = 20/44 (45%), Positives = 23/44 (52%)
Frame = -2 / -2
Query: 245 LPETSQTARKTKTEAPR*DTRISTWDSFSGTKPGRSSSAGA*GC 114
LP+ SQT T+ E PR* + D GT PGR S G GC
Sbjct: 176 LPKRSQTRETTRREEPR*IETMEDIDIEIGTYPGRFRSLGTYGC 45
>emb|BX814690.1|CNS0AEAQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB89ZG02 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 732
Score = 230 bits (496), Expect(2) = 5e-071
Identities = 94/155 (60%), Positives = 117/155 (75%)
Frame = +1 / +3
Query: 259 SKTDRLLMCWWAFTGLTHIMIEGPFVFTPDFFKKENPNFFDEVWKEYSKGDSRYVARDTA 438
+K D+LLMCWW FTGLTH+++EG FVF+P+FFK + EVWKEYSKGDSRYV RD+A
Sbjct: 198 AKLDKLLMCWWTFTGLTHVILEGYFVFSPEFFKDNTSAYLAEVWKEYSKGDSRYVGRDSA 377
Query: 439 TVTVEGITAVLEGPASLLAVYAIASRKSFSHILQFAVCLGQLYGCLVYFITAYLDGFNFW 618
V+VEGITAV+ GPASLLA+YAIA KS+S++L A+ + QLYGCLVYFITA L+G NF
Sbjct: 378 VVSVEGITAVIVGPASLLAIYAIAKEKSYSYVLPLAISVCQLYGCLVYFITAMLEGENFA 557
Query: 619 VGPFYFWAYFIGANSFWIWIPMLIAIRSWKKTCAA 723
FY+ +Y+IGAN +W P A R K+ AA
Sbjct: 558 TDSFYYDSYYIGANWWWGGRPARRAGRGGKERGAA 662
Score = 126 bits (270), Expect(2) = 8e-034
Identities = 66/118 (55%), Positives = 73/118 (61%)
Frame = -2 / -3
Query: 614 KLKPSKYAVMK*TRHP*SWPRQTANWRMWLKDFLDAIA*TASSDAGPSNTAVIPSTVTVA 435
K PS AVMK*T+HP*SW + A+ L DF A+A* A +AGP+ TAVIPST T A
Sbjct: 553 KFSPSNIAVMK*TKHP*SWQTEIASGST*LYDFSLAMA*IARREAGPTITAVIPSTDTTA 374
Query: 434 VSLATYLESPLLYSFQTXXXXXXXXXXXXXGVKTKGPSIIMWVNPVNAHQHMSRRSVL 261
SL TYLESPLLYSFQT G KTK PS I V PVN HQH+S S L
Sbjct: 373 ESLPTYLESPLLYSFQTSAR*AEVLSLKNSGEKTK*PSRIT*VRPVNVHQHISNLSSL 200
Score = 61.1 bits (127), Expect(2) = 5e-071
Identities = 22/46 (47%), Positives = 32/46 (69%)
Frame = +1 / +3
Query: 109 MGHPYAPAELDLPGFVPLKLSQVEILVSYLGASVFVFLAVWLVSGR 246
+ HPY P +L+LPG+VP+ +S I+ YLG+S+ V VWL+ GR
Sbjct: 54 LAHPYVPRDLNLPGYVPISMSMSSIVSIYLGSSLLVVSLVWLLFGR 191
Score = 40.0 bits (81), Expect(2) = 8e-034
Identities = 20/44 (45%), Positives = 23/44 (52%)
Frame = -2 / -3
Query: 245 LPETSQTARKTKTEAPR*DTRISTWDSFSGTKPGRSSSAGA*GC 114
LP+ SQT T+ E PR* + D GT PGR S G GC
Sbjct: 190 LPKRSQTRETTRREEPR*IETMEDIDIEIGTYPGRFRSLGTYGC 59
>gb|AC022472.2|T20H2 Sequence of BAC T20H2 from Arabidopsis thaliana chromosome 1, complete
sequence
Length = 92710
Score = 119 bits (255), Expect(4) = 7e-062
Identities = 45/75 (60%), Positives = 58/75 (77%)
Frame = +1 / -2
Query: 499 YAIASRKSFSHILQFAVCLGQLYGCLVYFITAYLDGFNFWVGPFYFWAYFIGANSFWIWI 678
YAIA KS+S++LQ A+ + QLYGCLVYFITA L+G NF FY+++Y+IGAN +W+ I
Sbjct: 62079 YAIAKEKSYSYVLQLAISVCQLYGCLVYFITAILEGDNFATNSFYYYSYYIGANCWWVLI 61900
Query: 679 PMLIAIRSWKKTCAA 723
P LI+ R WKK CAA
Sbjct: 61899 PSLISFRCWKKICAA 61855
Score = 74.8 bits (157), Expect(4) = 7e-062
Identities = 26/45 (57%), Positives = 34/45 (75%)
Frame = +1 / -1
Query: 259 SKTDRLLMCWWAFTGLTHIMIEGPFVFTPDFFKKENPNFFDEVWK 393
+K D+LLMCWW FTGLTH+++EG FVF+P+FFK + EV K
Sbjct: 62485 AKLDKLLMCWWTFTGLTHVILEGYFVFSPEFFKDNTSAYLAEVCK 62351
Score = 69.3 bits (145), Expect(4) = 7e-062
Identities = 29/36 (80%), Positives = 33/36 (91%)
Frame = +1 / -3
Query: 391 KEYSKGDSRYVARDTATVTVEGITAVLEGPASLLAV 498
KEYSKGDSRYV RD+A V+VEGITAV+ GPASLLA+
Sbjct: 62267 KEYSKGDSRYVGRDSAVVSVEGITAVIVGPASLLAM 62160
Score = 58.8 bits (122), Expect(4) = 7e-062
Identities = 21/45 (46%), Positives = 31/45 (68%)
Frame = +1 / -1
Query: 109 MGHPYAPAELDLPGFVPLKLSQVEILVSYLGASVFVFLAVWLVSG 243
+ HPY P +L+LPG+VP+ +S I+ YLG+S+ V VWL+ G
Sbjct: 62767 LAHPYVPRDLNLPGYVPISMSMSSIVSIYLGSSLLVVSLVWLLFG 62633
Score = 57.9 bits (120), Expect(4) = 1e-024
Identities = 26/35 (74%), Positives = 28/35 (80%)
Frame = -2 / +1
Query: 494 ASSDAGPSNTAVIPSTVTVAVSLATYLESPLLYSF 390
A +AGP+ TAVIPST T A SL TYLESPLLYSF
Sbjct: 62164 ARREAGPTITAVIPSTDTTAESLPTYLESPLLYSF 62268
Score = 45.5 bits (93), Expect(4) = 1e-024
Identities = 23/39 (58%), Positives = 27/39 (69%)
Frame = -2 / +2
Query: 614 KLKPSKYAVMK*TRHP*SWPRQTANWRMWLKDFLDAIA* 498
KL PSK AVMK*T+HP*SW + A+ L DF A+A*
Sbjct: 61964 KLSPSKIAVMK*TKHP*SWQTEIAS*ST*LYDFSLAMA* 62080
Score = 36.3 bits (73), Expect(4) = 1e-024
Identities = 13/40 (32%), Positives = 26/40 (65%)
Frame = -1 / +2
Query: 387 NFIKEIGVLLLEEIRSEDKGPLDHYVGQPCKCPPAHEQTV 268
NF K ++LE++R E++ L++ + + +CPP H+Q +
Sbjct: 62357 NFSKISRSVVLEKLRGENEIALENNMSETSECPPTHKQLI 62476
Score = 30.4 bits (60), Expect(4) = 1e-024
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -2 / +2
Query: 722 AAQVFFQDLMAMSIGIQIQKLFAPM 648
AAQ+FFQ MS GI+ + APM
Sbjct: 61856 AAQIFFQQRKEMSEGIKTHQQLAPM 61930
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 119 bits (255), Expect(3) = 2e-057
Identities = 45/75 (60%), Positives = 58/75 (77%)
Frame = +1 / +1
Query: 499 YAIASRKSFSHILQFAVCLGQLYGCLVYFITAYLDGFNFWVGPFYFWAYFIGANSFWIWI 678
YAIA KS+S++LQ A+ + QLYGCLVYFITA L+G NF FY+++Y+IGAN +W+ I
Sbjct: 6949672 YAIAKEKSYSYVLQLAISVCQLYGCLVYFITAILEGDNFATNSFYYYSYYIGANCWWVLI 6949851
Query: 679 PMLIAIRSWKKTCAA 723
P LI+ R WKK CAA
Sbjct: 6949852 PSLISFRCWKKICAA 6949896
Score = 74.8 bits (157), Expect(3) = 2e-057
Identities = 26/45 (57%), Positives = 34/45 (75%)
Frame = +1 / +3
Query: 259 SKTDRLLMCWWAFTGLTHIMIEGPFVFTPDFFKKENPNFFDEVWK 393
+K D+LLMCWW FTGLTH+++EG FVF+P+FFK + EV K
Sbjct: 6949266 AKLDKLLMCWWTFTGLTHVILEGYFVFSPEFFKDNTSAYLAEVCK 6949400
Score = 69.3 bits (145), Expect(3) = 2e-057
Identities = 29/36 (80%), Positives = 33/36 (91%)
Frame = +1 / +2
Query: 391 KEYSKGDSRYVARDTATVTVEGITAVLEGPASLLAV 498
KEYSKGDSRYV RD+A V+VEGITAV+ GPASLLA+
Sbjct: 6949484 KEYSKGDSRYVGRDSAVVSVEGITAVIVGPASLLAM 6949591
Score = 57.9 bits (120), Expect(4) = 1e-024
Identities = 26/35 (74%), Positives = 28/35 (80%)
Frame = -2 / -1
Query: 494 ASSDAGPSNTAVIPSTVTVAVSLATYLESPLLYSF 390
A +AGP+ TAVIPST T A SL TYLESPLLYSF
Sbjct: 6949587 ARREAGPTITAVIPSTDTTAESLPTYLESPLLYSF 6949483
Score = 45.5 bits (93), Expect(4) = 1e-024
Identities = 23/39 (58%), Positives = 27/39 (69%)
Frame = -2 / -2
Query: 614 KLKPSKYAVMK*TRHP*SWPRQTANWRMWLKDFLDAIA* 498
KL PSK AVMK*T+HP*SW + A+ L DF A+A*
Sbjct: 6949787 KLSPSKIAVMK*TKHP*SWQTEIAS*ST*LYDFSLAMA* 6949671
Score = 36.3 bits (73), Expect(4) = 1e-024
Identities = 13/40 (32%), Positives = 26/40 (65%)
Frame = -1 / -2
Query: 387 NFIKEIGVLLLEEIRSEDKGPLDHYVGQPCKCPPAHEQTV 268
NF K ++LE++R E++ L++ + + +CPP H+Q +
Sbjct: 6949394 NFSKISRSVVLEKLRGENEIALENNMSETSECPPTHKQLI 6949275
Score = 30.4 bits (60), Expect(4) = 1e-024
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -2 / -2
Query: 722 AAQVFFQDLMAMSIGIQIQKLFAPM 648
AAQ+FFQ MS GI+ + APM
Sbjct: 6949895 AAQIFFQQRKEMSEGIKTHQQLAPM 6949821
>gb|AI998831.1|AI998831 701547050 A. thaliana, Columbia Col-0, rosette-2 Arabidopsis
thaliana cDNA clone 701547050, mRNA sequence
Length = 566
Score = 202 bits (436), Expect = 1e-050
Identities = 80/125 (64%), Positives = 98/125 (78%)
Frame = +1 / -3
Query: 349 FFKKENPNFFDEVWKEYSKGDSRYVARDTATVTVEGITAVLEGPASLLAVYAIASRKSFS 528
FFK + EVWKEYSKGDSRYV RD+A V+VEGITAV+ GPASLLA+YAIA KS+S
Sbjct: 564 FFKDNTSAYLAEVWKEYSKGDSRYVGRDSAVVSVEGITAVIVGPASLLAIYAIAKEKSYS 385
Query: 529 HILQFAVCLGQLYGCLVYFITAYLDGFNFWVGPFYFWAYFIGANSFWIWIPMLIAIRSWK 708
++LQ A+ + QLYGCLVYFITA L+G NF FY+++Y+IGAN +W+ IP LI+ R WK
Sbjct: 384 YVLQLAISVCQLYGCLVYFITAILEGDNFATNSFYYYSYYIGANCWWVLIPSLISFRCWK 205
Query: 709 KTCAA 723
K CAA
Sbjct: 204 KICAA 190
Score = 104 bits (222), Expect(2) = 2e-024
Identities = 51/77 (66%), Positives = 57/77 (74%)
Frame = -2 / +2
Query: 614 KLKPSKYAVMK*TRHP*SWPRQTANWRMWLKDFLDAIA*TASSDAGPSNTAVIPSTVTVA 435
KL PSK AVMK*T+HP*SW + A+ L DF A+A* A +AGP+ TAVIPST T A
Sbjct: 299 KLSPSKIAVMK*TKHP*SWQTEIAS*ST*LYDFSLAMA*IARREAGPTITAVIPSTDTTA 478
Query: 434 VSLATYLESPLLYSFQT 384
SL TYLESPLLYSFQT
Sbjct: 479 ESLPTYLESPLLYSFQT 529
Score = 30.4 bits (60), Expect(2) = 2e-024
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -2 / +2
Query: 722 AAQVFFQDLMAMSIGIQIQKLFAPM 648
AAQ+FFQ MS GI+ + APM
Sbjct: 191 AAQIFFQQRKEMSEGIKTHQQLAPM 265
>gb|BE523928.1|BE523928 M43F2STM Arabidopsis developing seed Arabidopsis thaliana cDNA
clone M43F2 5', mRNA sequence
Length = 408
Score = 126 bits (270), Expect(2) = 4e-040
Identities = 47/71 (66%), Positives = 58/71 (81%)
Frame = +1 / +3
Query: 259 SKTDRLLMCWWAFTGLTHIMIEGPFVFTPDFFKKENPNFFDEVWKEYSKGDSRYVARDTA 438
+K D+LLMCWW FTGLTH+++EG FVF+P+FFK + EVWKEYSKGDSRYV RD+A
Sbjct: 195 AKLDKLLMCWWTFTGLTHVILEGYFVFSPEFFKDNTSAYLAEVWKEYSKGDSRYVGRDSA 374
Query: 439 TVTVEGITAVL 471
V+VE ITAV+
Sbjct: 375 VVSVERITAVI 407
Score = 61.1 bits (127), Expect(2) = 4e-040
Identities = 22/46 (47%), Positives = 32/46 (69%)
Frame = +1 / +3
Query: 109 MGHPYAPAELDLPGFVPLKLSQVEILVSYLGASVFVFLAVWLVSGR 246
+ HPY P +L+LPG+VP+ +S I+ YLG+S+ V VWL+ GR
Sbjct: 51 LAHPYVPRDLNLPGYVPISMSMSSIVSIYLGSSLLVVSLVWLLFGR 188
>gb|BP845881.1|BP845881 BP845881 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-95-B15 5',
mRNA sequence
Length = 404
Score = 108 bits (231), Expect(2) = 1e-035
Identities = 40/63 (63%), Positives = 50/63 (79%)
Frame = +1 / +3
Query: 259 SKTDRLLMCWWAFTGLTHIMIEGPFVFTPDFFKKENPNFFDEVWKEYSKGDSRYVARDTA 438
+K D+LLMCWW FTGLTH+++EG FVF+P+FFK + EV KEYSKGDSRYV RD+A
Sbjct: 216 AKLDKLLMCWWTFTGLTHVILEGYFVFSPEFFKDNTSAYLAEVGKEYSKGDSRYVGRDSA 395
Query: 439 TVT 447
V+
Sbjct: 396 VVS 404
Score = 63.8 bits (133), Expect(2) = 1e-035
Identities = 23/46 (50%), Positives = 33/46 (71%)
Frame = +1 / +3
Query: 109 MGHPYAPAELDLPGFVPLKLSQVEILVSYLGASVFVFLAVWLVSGR 246
+GHPY P +L+LPG+VP+ +S I+ YLG+S+ V VWL+ GR
Sbjct: 72 LGHPYVPRDLNLPGYVPISMSMSSIVSIYLGSSLLVVSLVWLLFGR 209
>gb|BP857462.1|BP857462 BP857462 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-33-K16 5',
mRNA sequence
Length = 374
Score = 103 bits (219), Expect(2) = 4e-033
Identities = 36/54 (66%), Positives = 44/54 (81%)
Frame = +1 / +3
Query: 259 SKTDRLLMCWWAFTGLTHIMIEGPFVFTPDFFKKENPNFFDEVWKEYSKGDSRY 420
+K D+LLMCWW FTGLTH+++EG FVF+P+FFK + EVWKEYSKGDSRY
Sbjct: 213 AKLDKLLMCWWTFTGLTHVILEGYFVFSPEFFKDNTSAYLAEVWKEYSKGDSRY 374
Score = 61.1 bits (127), Expect(2) = 4e-033
Identities = 22/46 (47%), Positives = 32/46 (69%)
Frame = +1 / +3
Query: 109 MGHPYAPAELDLPGFVPLKLSQVEILVSYLGASVFVFLAVWLVSGR 246
+ HPY P +L+LPG+VP+ +S I+ YLG+S+ V VWL+ GR
Sbjct: 69 LAHPYVPRDLNLPGYVPISMSMSSIVSIYLGSSLLVVSLVWLLFGR 206
>gb|BP843443.1|BP843443 BP843443 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-58-D09 5',
mRNA sequence
Length = 396
Score = 102 bits (217), Expect(2) = 1e-029
Identities = 36/58 (62%), Positives = 46/58 (79%)
Frame = +1 / +2
Query: 259 SKTDRLLMCWWAFTGLTHIMIEGPFVFTPDFFKKENPNFFDEVWKEYSKGDSRYVARD 432
+K D+LLMCWW F+GLTH+++EG VF+P+F K + + EVWKEYSKGDSRYV RD
Sbjct: 215 AKLDKLLMCWWTFSGLTHVILEGYSVFSPEFLKDKTSAYLAEVWKEYSKGDSRYVGRD 388
Score = 50.1 bits (103), Expect(2) = 1e-029
Identities = 17/33 (51%), Positives = 25/33 (75%)
Frame = +1 / +3
Query: 109 MGHPYAPAELDLPGFVPLKLSQVEILVSYLGAS 207
+GHPY P +L+LPG+VP+ +S I+ YLG+S
Sbjct: 72 LGHPYVPRDLNLPGYVPISMSMSSIVSIYLGSS 170
>gb|AU236348.1|AU236348 AU236348 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-91-A05 5',
mRNA sequence
Length = 368
Score = 93.2 bits (197), Expect(2) = 3e-029
Identities = 32/50 (64%), Positives = 40/50 (80%)
Frame = +1 / +1
Query: 259 SKTDRLLMCWWAFTGLTHIMIEGPFVFTPDFFKKENPNFFDEVWKEYSKG 408
+K D+LLMCWW FTGLTH+++EG FVF+P+FFK + EVWKEYSKG
Sbjct: 217 AKLDKLLMCWWTFTGLTHVILEGYFVFSPEFFKDNTSAYLAEVWKEYSKG 366
Score = 57.9 bits (120), Expect(2) = 3e-029
Identities = 22/46 (47%), Positives = 30/46 (65%)
Frame = +1 / +1
Query: 109 MGHPYAPAELDLPGFVPLKLSQVEILVSYLGASVFVFLAVWLVSGR 246
+ HPY P +L+LPG+VP S I+ YLG+S+ V VWL+ GR
Sbjct: 73 LAHPYVPRDLNLPGYVPXXXSMSSIVSIYLGSSLLVVSLVWLLFGR 210
>gb|BP799358.1|BP799358 BP799358 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-10-L17 5',
mRNA sequence
Length = 420
Score = 59.7 bits (124), Expect(3) = 2e-027
Identities = 20/46 (43%), Positives = 33/46 (71%)
Frame = +1 / +3
Query: 109 MGHPYAPAELDLPGFVPLKLSQVEILVSYLGASVFVFLAVWLVSGR 246
+ HPY P +L++PG+VP+ +S I+ YLG+S+ V ++WL+ GR
Sbjct: 72 LAHPYVPRDLNVPGYVPISMSMFSIVSIYLGSSLLVVSSLWLLFGR 209
Score = 57.4 bits (119), Expect(3) = 2e-027
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = +1 / +3
Query: 373 FFDEVWKEYSKGDSRYVARDTATVTVEGI 459
+ EVWKEYSKGDSRYV RD+A V+VEGI
Sbjct: 333 YLAEVWKEYSKGDSRYVGRDSAVVSVEGI 419
Score = 46.0 bits (94), Expect(3) = 2e-027
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = +1 / +3
Query: 259 SKTDRLLMCWWAFTGLTHIMIEGPFVFTPDFFKK 360
+K D+LLMC W FTGLTH G F F P F +
Sbjct: 216 TKLDKLLMCGWTFTGLTHAYSRGLFRFLP*AFSR 317
>gb|BP843458.1|BP843458 BP843458 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-86-N22 5',
mRNA sequence
Length = 364
Score = 81.7 bits (172), Expect(2) = 1e-026
Identities = 29/48 (60%), Positives = 37/48 (77%)
Frame = +1 / +1
Query: 259 SKTDRLLMCWWAFTGLTHIMIEGPFVFTPDFFKKENPNFFDEVWKEYS 402
+K D+LLMC W FTGLTH+++EG FVF+P+FFK + EVWKEYS
Sbjct: 220 AKLDKLLMCRWTFTGLTHVILEGYFVFSPEFFKDNTSAYLAEVWKEYS 363
Score = 61.1 bits (127), Expect(2) = 1e-026
Identities = 22/46 (47%), Positives = 32/46 (69%)
Frame = +1 / +1
Query: 109 MGHPYAPAELDLPGFVPLKLSQVEILVSYLGASVFVFLAVWLVSGR 246
+ HPY P +L+LPG+VP+ +S I+ YLG+S+ V VWL+ GR
Sbjct: 76 LAHPYVPRDLNLPGYVPISMSMSSIVSIYLGSSLLVVSLVWLLFGR 213
>gb|BP571775.1|BP571775 BP571775 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-77-I02 3',
mRNA sequence
Length = 448
Score = 122 bits (262), Expect = 1e-026
Identities = 46/77 (59%), Positives = 60/77 (77%)
Frame = +1 / -3
Query: 493 AVYAIASRKSFSHILQFAVCLGQLYGCLVYFITAYLDGFNFWVGPFYFWAYFIGANSFWI 672
A+YAIA KS+S++LQ A+ + QLYGCLVYFITA L+G NF FY+++Y+IGAN +W+
Sbjct: 446 AIYAIAKEKSYSYVLQLAISVCQLYGCLVYFITAILEGDNFATNSFYYYSYYIGANCWWV 267
Query: 673 WIPMLIAIRSWKKTCAA 723
IP LI+ R WKK CAA
Sbjct: 266 LIPSLISFRCWKKICAA 216
>gb|CW799441.1|CW799441 WiscDsLox337D01 Arabidopsis thaliana T-DNA insertion flanking
sequences Arabidopsis thaliana genomic, DNA sequence
Length = 952
Score = 120 bits (256), Expect = 8e-026
Identities = 45/75 (60%), Positives = 58/75 (77%)
Frame = +1 / -3
Query: 499 YAIASRKSFSHILQFAVCLGQLYGCLVYFITAYLDGFNFWVGPFYFWAYFIGANSFWIWI 678
YAIA KS+S++LQ A+ + QLYGCLVYFITA L+G NF FY+++Y+IGAN +W+ I
Sbjct: 470 YAIAKEKSYSYVLQLAISVCQLYGCLVYFITAILEGXNFAXNSFYYYSYYIGANCWWVLI 291
Query: 679 PMLIAIRSWKKTCAA 723
P LI+ R WKK CAA
Sbjct: 290 PSLISFRCWKKICAA 246
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 119 bits (255), Expect = 1e-025
Identities = 45/75 (60%), Positives = 58/75 (77%)
Frame = +1 / +3
Query: 499 YAIASRKSFSHILQFAVCLGQLYGCLVYFITAYLDGFNFWVGPFYFWAYFIGANSFWIWI 678
YAIA KS+S++LQ A+ + QLYGCLVYFITA L+G NF FY+++Y+IGAN +W+ I
Sbjct: 6949848 YAIAKEKSYSYVLQLAISVCQLYGCLVYFITAILEGDNFATNSFYYYSYYIGANCWWVLI 6950027
Query: 679 PMLIAIRSWKKTCAA 723
P LI+ R WKK CAA
Sbjct: 6950028 PSLISFRCWKKICAA 6950072
>gb|BP822592.1|BP822592 BP822592 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-62-C16 5',
mRNA sequence
Length = 373
Score = 65.7 bits (137), Expect(3) = 3e-024
Identities = 21/31 (67%), Positives = 28/31 (90%)
Frame = +1 / +3
Query: 259 SKTDRLLMCWWAFTGLTHIMIEGPFVFTPDF 351
+K D+LLMCWW FTGLTH+++EG FVF+P+F
Sbjct: 222 AKLDKLLMCWWTFTGLTHVILEGYFVFSPEF 314
Score = 61.1 bits (127), Expect(3) = 3e-024
Identities = 22/46 (47%), Positives = 32/46 (69%)
Frame = +1 / +3
Query: 109 MGHPYAPAELDLPGFVPLKLSQVEILVSYLGASVFVFLAVWLVSGR 246
+ HPY P +L+LPG+VP+ +S I+ YLG+S+ V VWL+ GR
Sbjct: 78 LAHPYVPRDLNLPGYVPISMSMSSIVSIYLGSSLLVVSLVWLLFGR 215
Score = 25.4 bits (49), Expect(3) = 3e-024
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1 / +1
Query: 388 WKEYSKGD 411
WKEYSKGD
Sbjct: 349 WKEYSKGD 372
>gb|BP576570.1|BP576570 BP576570 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-92-I20 3',
mRNA sequence
Length = 432
Score = 110 bits (235), Expect = 6e-023
Identities = 41/69 (59%), Positives = 54/69 (78%)
Frame = +1 / -3
Query: 517 KSFSHILQFAVCLGQLYGCLVYFITAYLDGFNFWVGPFYFWAYFIGANSFWIWIPMLIAI 696
KS+S++LQ A+ + QLYGCLVYFITA L+G NF FY+++Y+IGAN +W+ IP LI+
Sbjct: 421 KSYSYVLQLAISVCQLYGCLVYFITAILEGDNFATNSFYYYSYYIGANFWWVLIPSLISF 242
Query: 697 RSWKKTCAA 723
R WKK CAA
Sbjct: 241 RCWKKICAA 215
>gb|BP592528.1|BP592528 BP592528 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-18-K22 3',
mRNA sequence
Length = 449
Score = 64.8 bits (135), Expect(2) = 2e-022
Identities = 24/47 (51%), Positives = 31/47 (65%)
Frame = +1 / -2
Query: 583 FITAYLDGFNFWVGPFYFWAYFIGANSFWIWIPMLIAIRSWKKTCAA 723
F YL NF FY+++Y+IGAN +W+ IP LI+ R WKK CAA
Sbjct: 355 FHYCYLGRDNFATNSFYYYSYYIGANCWWVLIPSLISFRCWKKICAA 215
Score = 63.8 bits (133), Expect(2) = 2e-022
Identities = 25/38 (65%), Positives = 32/38 (84%)
Frame = +1 / -3
Query: 490 LAVYAIASRKSFSHILQFAVCLGQLYGCLVYFITAYLD 603
LA+YAIA KS+S++LQ A+ + QLYGCLVYFITA L+
Sbjct: 447 LAIYAIAKEKSYSYLLQLAISVCQLYGCLVYFITAILE 334
>gb|T22967.1|T22967 4975 Lambda-PRL2 Arabidopsis thaliana cDNA clone 108G19T7, mRNA
sequence
Length = 425
Score = 66.1 bits (138), Expect(2) = 4e-022
Identities = 22/40 (55%), Positives = 31/40 (77%)
Frame = +1 / +2
Query: 259 SKTDRLLMCWWAFTGLTHIMIEGPFVFTPDFFKKENPNFF 378
+K D++LMCWW FTGLTH+++EG FVF P F K+N + +
Sbjct: 191 AKLDKMLMCWWTFTGLTHVILEGYFVFLPXRFFKDNTSAY 310
Score = 61.1 bits (127), Expect(2) = 4e-022
Identities = 22/46 (47%), Positives = 32/46 (69%)
Frame = +1 / +2
Query: 109 MGHPYAPAELDLPGFVPLKLSQVEILVSYLGASVFVFLAVWLVSGR 246
+ HPY P +L+LPG+VP+ +S I+ YLG+S+ V VWL+ GR
Sbjct: 47 LAHPYVPRDLNLPGYVPISMSMSSIVSIYLGSSLLVVSLVWLLFGR 184
>gb|BP576268.1|BP576268 BP576268 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-91-G13 3',
mRNA sequence
Length = 411
Score = 103 bits (220), Expect = 7e-021
Identities = 38/65 (58%), Positives = 50/65 (76%)
Frame = +1 / -2
Query: 529 HILQFAVCLGQLYGCLVYFITAYLDGFNFWVGPFYFWAYFIGANSFWIWIPMLIAIRSWK 708
++LQ A+ + QLYGCLVYFITA L+G NF FY+++Y+IGAN +W+ IP LI+ R WK
Sbjct: 410 YVLQLAISVCQLYGCLVYFITAILEGDNFATNSFYYYSYYIGANCWWVLIPSLISFRCWK 231
Query: 709 KTCAA 723
K CAA
Sbjct: 230 KICAA 216
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,592,250,601
Number of Sequences: 1013581
Number of extensions: 20237132
Number of successful extensions: 138195
Number of sequences better than 1.0e-020: 34
length of database: 302,980,290
effective HSP length: 56
effective length of database: 246,219,754
effective search space used: 59831400222
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)