TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 8010462.2.1
(638 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AV558154.1|AV558154 AV558154 Arabidopsis thaliana green ... 77 1e-021
gb|AV800034.1|AV800034 AV800034 RAFL9 Arabidopsis thaliana ... 76 1e-021
gb|AV782023.1|AV782023 AV782023 RAFL4 Arabidopsis thaliana ... 76 1e-021
gb|AC006922.7| Arabidopsis thaliana chromosome 2 clone T1J8... 76 2e-021
gb|L33677.1|ATHPAL Arabidopsis thaliana (strain Landsberg e... 76 2e-021
ref|NM_129260.2| Arabidopsis thaliana PAL1; phenylalanine a... 76 2e-021
gb|AY045919.1| Arabidopsis thaliana putative phenylalanine ... 76 2e-021
gb|BT003330.1| Arabidopsis thaliana Unknown protein mRNA, c... 76 2e-021
gb|AY079363.1| Arabidopsis thaliana putative phenylalanine ... 76 2e-021
emb|AX412245.1| Sequence 9 from Patent WO0222675 76 2e-021
emb|AX412319.1| Sequence 83 from Patent WO0222675 76 2e-021
emb|AX412320.1| Sequence 84 from Patent WO0222675 76 2e-021
emb|AX507018.1| Sequence 1713 from Patent WO0216655 76 2e-021
emb|AX651263.1| Sequence 47 from Patent WO03000898 76 2e-021
emb|CQ804940.1| Sequence 1351 from Patent WO2004035798 76 2e-021
emb|CQ805130.1| Sequence 1541 from Patent WO2004035798 76 2e-021
gb|AY303128.1| Arabidopsis thaliana phenylalanine ammonia l... 76 2e-021
dbj|AK221928.1| Arabidopsis thaliana mRNA for phenylalanine... 76 2e-021
emb|BX821358.1|CNS0AA3A Arabidopsis thaliana Full-length cD... 76 2e-021
gb|AV783398.1|AV783398 AV783398 RAFL5 Arabidopsis thaliana ... 76 2e-021
dbj|AK221124.1| Arabidopsis thaliana mRNA for phenylalanine... 76 2e-021
gb|AV547892.1|AV547892 AV547892 Arabidopsis thaliana roots ... 76 2e-021
gb|AA713341.1|AA713341 32901 CD4-16 Arabidopsis thaliana cD... 76 2e-021
gb|BP608663.1|BP608663 BP608663 RAFL16 Arabidopsis thaliana... 76 2e-021
gb|BP606244.1|BP606244 BP606244 RAFL16 Arabidopsis thaliana... 76 2e-021
gb|AV797825.1|AV797825 AV797825 RAFL9 Arabidopsis thaliana ... 76 2e-021
gb|BP794537.1|BP794537 BP794537 RAFL7 Arabidopsis thaliana ... 76 2e-021
gb|BP598055.1|BP598055 BP598055 RAFL16 Arabidopsis thaliana... 76 2e-021
gb|AV803304.1|AV803304 AV803304 RAFL9 Arabidopsis thaliana ... 76 2e-021
gb|AV820059.1|AV820059 AV820059 RAFL11 Arabidopsis thaliana... 76 2e-021
gb|AV814576.1|AV814576 AV814576 RAFL9 Arabidopsis thaliana ... 76 2e-021
gb|BP577255.1|BP577255 BP577255 RAFL14 Arabidopsis thaliana... 76 2e-021
gb|AY088956.1| Arabidopsis thaliana clone 110886 mRNA, comp... 73 3e-021
gb|AV564792.1|AV564792 AV564792 Arabidopsis thaliana green ... 74 3e-021
gb|BP648305.1|BP648305 BP648305 RAFL19 Arabidopsis thaliana... 73 6e-021
emb|AL132958.1|ATT4D2 Arabidopsis thaliana DNA chromosome 3... 72 8e-021
gb|L33678.1|ATHPAL2 Arabidopsis thaliana (strain Columbia) ... 72 8e-021
ref|NM_115186.3| Arabidopsis thaliana PAL2; phenylalanine a... 72 8e-021
gb|AY092957.1| Arabidopsis thaliana phenylalanine ammonia-l... 72 8e-021
gb|AF367308.1| Arabidopsis thaliana AT3g53260/T4D2_190 mRNA... 72 8e-021
gb|BT000035.1| Arabidopsis thaliana phenylalanine ammonia-l... 72 8e-021
gb|BX835465.1|BX835465 BX835465 Arabidopsis thaliana Adult ... 72 8e-021
gb|AV782312.1|AV782312 AV782312 RAFL4 Arabidopsis thaliana ... 72 8e-021
gb|AV544717.1|AV544717 AV544717 Arabidopsis thaliana roots ... 72 8e-021
gb|AV544960.1|AV544960 AV544960 Arabidopsis thaliana roots ... 72 8e-021
gb|AI997452.1|AI997452 701554008 A. thaliana, Columbia Col-... 72 8e-021
gb|AV524210.1|AV524210 AV524210 Arabidopsis thaliana aboveg... 72 8e-021
gb|AV558603.1|AV558603 AV558603 Arabidopsis thaliana green ... 72 8e-021
gb|BE662969.1|BE662969 EST00113 Arabidopsis Acute Ozone For... 72 8e-021
gb|AV555308.1|AV555308 AV555308 Arabidopsis thaliana green ... 72 8e-021
gb|AV547686.1|AV547686 AV547686 Arabidopsis thaliana roots ... 72 8e-021
gb|AV797345.1|AV797345 AV797345 RAFL9 Arabidopsis thaliana ... 72 9e-021
gb|AV564149.1|AV564149 AV564149 Arabidopsis thaliana green ... 72 9e-021
gb|AV565930.1|AV565930 AV565930 Arabidopsis thaliana green ... 72 9e-021
gb|BP786658.1|BP786658 BP786658 RAFL7 Arabidopsis thaliana ... 72 9e-021
gb|AV796886.1|AV796886 AV796886 RAFL9 Arabidopsis thaliana ... 72 9e-021
gb|AV797794.1|AV797794 AV797794 RAFL9 Arabidopsis thaliana ... 72 9e-021
gb|BP597546.1|BP597546 BP597546 RAFL15 Arabidopsis thaliana... 72 9e-021
gb|AV544318.1|AV544318 AV544318 Arabidopsis thaliana roots ... 72 9e-021
gb|AV558919.1|AV558919 AV558919 Arabidopsis thaliana green ... 72 9e-021
gb|BP786338.1|BP786338 BP786338 RAFL7 Arabidopsis thaliana ... 72 9e-021
gb|AV790081.1|AV790081 AV790081 RAFL6 Arabidopsis thaliana ... 72 9e-021
gb|AV548841.1|AV548841 AV548841 Arabidopsis thaliana roots ... 72 9e-021
gb|AV813837.1|AV813837 AV813837 RAFL9 Arabidopsis thaliana ... 72 9e-021
gb|AV559798.1|AV559798 AV559798 Arabidopsis thaliana green ... 72 9e-021
gb|AV544709.1|AV544709 AV544709 Arabidopsis thaliana roots ... 72 9e-021
gb|AV546412.1|AV546412 AV546412 Arabidopsis thaliana roots ... 72 9e-021
gb|AV797838.1|AV797838 AV797838 RAFL9 Arabidopsis thaliana ... 72 9e-021
gb|AV801904.1|AV801904 AV801904 RAFL9 Arabidopsis thaliana ... 72 9e-021
>gb|AV558154.1|AV558154 AV558154 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ090g07F 3', mRNA sequence
Length = 490
Score = 77.1 bits (162), Expect(2) = 1e-021
Identities = 28/40 (70%), Positives = 35/40 (87%)
Frame = +1 / -3
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
++G ++PNRI+ECRSYPLYRFVREE+GTE LTGE+ SP
Sbjct: 407 DNGTSVIPNRIKECRSYPLYRFVREELGTELLTGEKVTSP 288
Score = 48.3 bits (99), Expect(2) = 1e-021
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = +1 / -3
Query: 247 IDPLLECLKEWNGAPLPLC* 306
IDP++ECL EWNGAP+P+C*
Sbjct: 239 IDPMMECLNEWNGAPIPIC* 180
>gb|AV800034.1|AV800034 AV800034 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-22-I01 3',
mRNA sequence
Length = 413
Score = 76.2 bits (160), Expect(2) = 1e-021
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = +1 / -1
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
++G +PNRI+ECRSYPLYRFVREE+GTE LTGE+ SP
Sbjct: 404 DNGTSAIPNRIKECRSYPLYRFVREELGTELLTGEKVTSP 285
Score = 49.2 bits (101), Expect(2) = 1e-021
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = +1 / -3
Query: 247 IDPLLECLKEWNGAPLPLC*AQLSCTHL 330
IDP++ECL EWNGAP+P+C + + C L
Sbjct: 237 IDPMMECLNEWNGAPIPICKSIVLCFFL 154
>gb|AV782023.1|AV782023 AV782023 RAFL4 Arabidopsis thaliana cDNA clone RAFL04-13-B02 3',
mRNA sequence
Length = 352
Score = 76.2 bits (160), Expect(2) = 1e-021
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = +1 / -3
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
++G +PNRI+ECRSYPLYRFVREE+GTE LTGE+ SP
Sbjct: 296 DNGTSAIPNRIKECRSYPLYRFVREELGTELLTGEKVTSP 177
Score = 48.3 bits (99), Expect(2) = 1e-021
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = +1 / -3
Query: 247 IDPLLECLKEWNGAPLPLC* 306
IDP++ECL EWNGAP+P+C*
Sbjct: 128 IDPMMECLNEWNGAPIPIC* 69
>gb|AC006922.7| Arabidopsis thaliana chromosome 2 clone T1J8 map g6825, complete sequence
Length = 134151
Score = 76.2 bits (160), Expect(2) = 2e-021
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = +1 / -3
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
++G +PNRI+ECRSYPLYRFVREE+GTE LTGE+ SP
Sbjct: 119008 DNGTSAIPNRIKECRSYPLYRFVREELGTELLTGEKVTSP 118889
Score = 48.3 bits (99), Expect(2) = 2e-021
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = +1 / -3
Query: 247 IDPLLECLKEWNGAPLPLC* 306
IDP++ECL EWNGAP+P+C*
Sbjct: 118840 IDPMMECLNEWNGAPIPIC* 118781
>gb|L33677.1|ATHPAL Arabidopsis thaliana (strain Landsberg erecta) phenylalanine
ammonia-lyase (PAL) gene, complete cds
Length = 4921
Score = 76.2 bits (160), Expect(2) = 2e-021
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = +1 / +2
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
++G +PNRI+ECRSYPLYRFVREE+GTE LTGE+ SP
Sbjct: 4349 DNGTSAIPNRIKECRSYPLYRFVREELGTELLTGEKVTSP 4468
Score = 48.3 bits (99), Expect(2) = 2e-021
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = +1 / +2
Query: 247 IDPLLECLKEWNGAPLPLC* 306
IDP++ECL EWNGAP+P+C*
Sbjct: 4517 IDPMMECLNEWNGAPIPIC* 4576
>ref|NM_129260.2| Arabidopsis thaliana PAL1; phenylalanine ammonia-lyase AT2G37040
(PAL1) mRNA, complete cds
Length = 2530
Score = 76.2 bits (160), Expect(2) = 2e-021
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = +1 / +1
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
++G +PNRI+ECRSYPLYRFVREE+GTE LTGE+ SP
Sbjct: 2077 DNGTSAIPNRIKECRSYPLYRFVREELGTELLTGEKVTSP 2196
Score = 48.3 bits (99), Expect(2) = 2e-021
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = +1 / +1
Query: 247 IDPLLECLKEWNGAPLPLC* 306
IDP++ECL EWNGAP+P+C*
Sbjct: 2245 IDPMMECLNEWNGAPIPIC* 2304
>gb|AY045919.1| Arabidopsis thaliana putative phenylalanine ammonia lyase PAL1
(At2g37040) mRNA, complete cds
Length = 2527
Score = 76.2 bits (160), Expect(2) = 2e-021
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = +1 / +1
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
++G +PNRI+ECRSYPLYRFVREE+GTE LTGE+ SP
Sbjct: 2077 DNGTSAIPNRIKECRSYPLYRFVREELGTELLTGEKVTSP 2196
Score = 48.3 bits (99), Expect(2) = 2e-021
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = +1 / +1
Query: 247 IDPLLECLKEWNGAPLPLC* 306
IDP++ECL EWNGAP+P+C*
Sbjct: 2245 IDPMMECLNEWNGAPIPIC* 2304
>gb|BT003330.1| Arabidopsis thaliana Unknown protein mRNA, complete cds
Length = 2484
Score = 76.2 bits (160), Expect(2) = 2e-021
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = +1 / +1
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
++G +PNRI+ECRSYPLYRFVREE+GTE LTGE+ SP
Sbjct: 2077 DNGTSAIPNRIKECRSYPLYRFVREELGTELLTGEKVTSP 2196
Score = 48.3 bits (99), Expect(2) = 2e-021
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = +1 / +1
Query: 247 IDPLLECLKEWNGAPLPLC* 306
IDP++ECL EWNGAP+P+C*
Sbjct: 2245 IDPMMECLNEWNGAPIPIC* 2304
>gb|AY079363.1| Arabidopsis thaliana putative phenylalanine ammonia lyase PAL1
(At2g37040) mRNA, complete cds
Length = 2209
Score = 76.2 bits (160), Expect(2) = 2e-021
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = +1 / +1
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
++G +PNRI+ECRSYPLYRFVREE+GTE LTGE+ SP
Sbjct: 1951 DNGTSAIPNRIKECRSYPLYRFVREELGTELLTGEKVTSP 2070
Score = 48.3 bits (99), Expect(2) = 2e-021
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = +1 / +1
Query: 247 IDPLLECLKEWNGAPLPLC* 306
IDP++ECL EWNGAP+P+C*
Sbjct: 2119 IDPMMECLNEWNGAPIPIC* 2178
>emb|AX412245.1| Sequence 9 from Patent WO0222675
Length = 2178
Score = 76.2 bits (160), Expect(2) = 2e-021
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = +1 / +1
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
++G +PNRI+ECRSYPLYRFVREE+GTE LTGE+ SP
Sbjct: 1951 DNGTSAIPNRIKECRSYPLYRFVREELGTELLTGEKVTSP 2070
Score = 48.3 bits (99), Expect(2) = 2e-021
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = +1 / +1
Query: 247 IDPLLECLKEWNGAPLPLC* 306
IDP++ECL EWNGAP+P+C*
Sbjct: 2119 IDPMMECLNEWNGAPIPIC* 2178
>emb|AX412319.1| Sequence 83 from Patent WO0222675
Length = 2178
Score = 76.2 bits (160), Expect(2) = 2e-021
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = +1 / +1
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
++G +PNRI+ECRSYPLYRFVREE+GTE LTGE+ SP
Sbjct: 1951 DNGTSAIPNRIKECRSYPLYRFVREELGTELLTGEKVTSP 2070
Score = 48.3 bits (99), Expect(2) = 2e-021
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = +1 / +1
Query: 247 IDPLLECLKEWNGAPLPLC* 306
IDP++ECL EWNGAP+P+C*
Sbjct: 2119 IDPMMECLNEWNGAPIPIC* 2178
>emb|AX412320.1| Sequence 84 from Patent WO0222675
Length = 2178
Score = 76.2 bits (160), Expect(2) = 2e-021
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = +1 / +1
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
++G +PNRI+ECRSYPLYRFVREE+GTE LTGE+ SP
Sbjct: 1951 DNGTSAIPNRIKECRSYPLYRFVREELGTELLTGEKVTSP 2070
Score = 48.3 bits (99), Expect(2) = 2e-021
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = +1 / +1
Query: 247 IDPLLECLKEWNGAPLPLC* 306
IDP++ECL EWNGAP+P+C*
Sbjct: 2119 IDPMMECLNEWNGAPIPIC* 2178
>emb|AX507018.1| Sequence 1713 from Patent WO0216655
Length = 2178
Score = 76.2 bits (160), Expect(2) = 2e-021
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = +1 / +1
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
++G +PNRI+ECRSYPLYRFVREE+GTE LTGE+ SP
Sbjct: 1951 DNGTSAIPNRIKECRSYPLYRFVREELGTELLTGEKVTSP 2070
Score = 48.3 bits (99), Expect(2) = 2e-021
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = +1 / +1
Query: 247 IDPLLECLKEWNGAPLPLC* 306
IDP++ECL EWNGAP+P+C*
Sbjct: 2119 IDPMMECLNEWNGAPIPIC* 2178
>emb|AX651263.1| Sequence 47 from Patent WO03000898
Length = 2178
Score = 76.2 bits (160), Expect(2) = 2e-021
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = +1 / +1
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
++G +PNRI+ECRSYPLYRFVREE+GTE LTGE+ SP
Sbjct: 1951 DNGTSAIPNRIKECRSYPLYRFVREELGTELLTGEKVTSP 2070
Score = 48.3 bits (99), Expect(2) = 2e-021
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = +1 / +1
Query: 247 IDPLLECLKEWNGAPLPLC* 306
IDP++ECL EWNGAP+P+C*
Sbjct: 2119 IDPMMECLNEWNGAPIPIC* 2178
>emb|CQ804940.1| Sequence 1351 from Patent WO2004035798
Length = 2178
Score = 76.2 bits (160), Expect(2) = 2e-021
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = +1 / +1
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
++G +PNRI+ECRSYPLYRFVREE+GTE LTGE+ SP
Sbjct: 1951 DNGTSAIPNRIKECRSYPLYRFVREELGTELLTGEKVTSP 2070
Score = 48.3 bits (99), Expect(2) = 2e-021
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = +1 / +1
Query: 247 IDPLLECLKEWNGAPLPLC* 306
IDP++ECL EWNGAP+P+C*
Sbjct: 2119 IDPMMECLNEWNGAPIPIC* 2178
>emb|CQ805130.1| Sequence 1541 from Patent WO2004035798
Length = 2178
Score = 76.2 bits (160), Expect(2) = 2e-021
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = +1 / +1
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
++G +PNRI+ECRSYPLYRFVREE+GTE LTGE+ SP
Sbjct: 1951 DNGTSAIPNRIKECRSYPLYRFVREELGTELLTGEKVTSP 2070
Score = 48.3 bits (99), Expect(2) = 2e-021
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = +1 / +1
Query: 247 IDPLLECLKEWNGAPLPLC* 306
IDP++ECL EWNGAP+P+C*
Sbjct: 2119 IDPMMECLNEWNGAPIPIC* 2178
>gb|AY303128.1| Arabidopsis thaliana phenylalanine ammonia lyase (PAL1) mRNA,
complete cds
Length = 2178
Score = 76.2 bits (160), Expect(2) = 2e-021
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = +1 / +1
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
++G +PNRI+ECRSYPLYRFVREE+GTE LTGE+ SP
Sbjct: 1951 DNGTSAIPNRIKECRSYPLYRFVREELGTELLTGEKVTSP 2070
Score = 48.3 bits (99), Expect(2) = 2e-021
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = +1 / +1
Query: 247 IDPLLECLKEWNGAPLPLC* 306
IDP++ECL EWNGAP+P+C*
Sbjct: 2119 IDPMMECLNEWNGAPIPIC* 2178
>dbj|AK221928.1| Arabidopsis thaliana mRNA for phenylalanine ammonia lyase, partial
cds, clone: RAFL22-40-C04
Length = 1167
Score = 76.2 bits (160), Expect(2) = 2e-021
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = +1 / +2
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
++G +PNRI+ECRSYPLYRFVREE+GTE LTGE+ SP
Sbjct: 848 DNGTSAIPNRIKECRSYPLYRFVREELGTELLTGEKVTSP 967
Score = 48.3 bits (99), Expect(2) = 2e-021
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = +1 / +2
Query: 247 IDPLLECLKEWNGAPLPLC* 306
IDP++ECL EWNGAP+P+C*
Sbjct: 1016 IDPMMECLNEWNGAPIPIC* 1075
>emb|BX821358.1|CNS0AA3A Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL35ZG05 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 714
Score = 76.2 bits (160), Expect(2) = 2e-021
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = +1 / +3
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
++G +PNRI+ECRSYPLYRFVREE+GTE LTGE+ SP
Sbjct: 297 DNGTSAIPNRIKECRSYPLYRFVREELGTELLTGEKVTSP 416
Score = 48.3 bits (99), Expect(2) = 2e-021
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = +1 / +3
Query: 247 IDPLLECLKEWNGAPLPLC* 306
IDP++ECL EWNGAP+P+C*
Sbjct: 465 IDPMMECLNEWNGAPIPIC* 524
>gb|AV783398.1|AV783398 AV783398 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-09-D14 3',
mRNA sequence
Length = 663
Score = 76.2 bits (160), Expect(2) = 2e-021
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = +1 / -1
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
++G +PNRI+ECRSYPLYRFVREE+GTE LTGE+ SP
Sbjct: 423 DNGTSAIPNRIKECRSYPLYRFVREELGTELLTGEKVTSP 304
Score = 48.3 bits (99), Expect(2) = 2e-021
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = +1 / -1
Query: 247 IDPLLECLKEWNGAPLPLC* 306
IDP++ECL EWNGAP+P+C*
Sbjct: 255 IDPMMECLNEWNGAPIPIC* 196
>dbj|AK221124.1| Arabidopsis thaliana mRNA for phenylalanine ammonia lyase, partial
cds, clone: RAFL22-91-F15
Length = 537
Score = 76.2 bits (160), Expect(2) = 2e-021
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = +1 / +3
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
++G +PNRI+ECRSYPLYRFVREE+GTE LTGE+ SP
Sbjct: 138 DNGTSAIPNRIKECRSYPLYRFVREELGTELLTGEKVTSP 257
Score = 48.3 bits (99), Expect(2) = 2e-021
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = +1 / +3
Query: 247 IDPLLECLKEWNGAPLPLC* 306
IDP++ECL EWNGAP+P+C*
Sbjct: 306 IDPMMECLNEWNGAPIPIC* 365
>gb|AV547892.1|AV547892 AV547892 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZL42b10F 3', mRNA sequence
Length = 514
Score = 76.2 bits (160), Expect(2) = 2e-021
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = +1 / -2
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
++G +PNRI+ECRSYPLYRFVREE+GTE LTGE+ SP
Sbjct: 423 DNGTSAIPNRIKECRSYPLYRFVREELGTELLTGEKVTSP 304
Score = 48.3 bits (99), Expect(2) = 2e-021
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = +1 / -2
Query: 247 IDPLLECLKEWNGAPLPLC* 306
IDP++ECL EWNGAP+P+C*
Sbjct: 255 IDPMMECLNEWNGAPIPIC* 196
>gb|AA713341.1|AA713341 32901 CD4-16 Arabidopsis thaliana cDNA clone H2C1T7, mRNA sequence
Length = 497
Score = 76.2 bits (160), Expect(2) = 2e-021
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = +1 / -3
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
++G +PNRI+ECRSYPLYRFVREE+GTE LTGE+ SP
Sbjct: 327 DNGTSAIPNRIKECRSYPLYRFVREELGTELLTGEKVTSP 208
Score = 48.3 bits (99), Expect(2) = 2e-021
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = +1 / -3
Query: 247 IDPLLECLKEWNGAPLPLC* 306
IDP++ECL EWNGAP+P+C*
Sbjct: 159 IDPMMECLNEWNGAPIPIC* 100
>gb|BP608663.1|BP608663 BP608663 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-79-G12 3',
mRNA sequence
Length = 454
Score = 76.2 bits (160), Expect(2) = 2e-021
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = +1 / -1
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
++G +PNRI+ECRSYPLYRFVREE+GTE LTGE+ SP
Sbjct: 391 DNGTSAIPNRIKECRSYPLYRFVREELGTELLTGEKVTSP 272
Score = 48.3 bits (99), Expect(2) = 2e-021
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = +1 / -1
Query: 247 IDPLLECLKEWNGAPLPLC* 306
IDP++ECL EWNGAP+P+C*
Sbjct: 223 IDPMMECLNEWNGAPIPIC* 164
>gb|BP606244.1|BP606244 BP606244 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-70-D06 3',
mRNA sequence
Length = 437
Score = 76.2 bits (160), Expect(2) = 2e-021
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = +1 / -2
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
++G +PNRI+ECRSYPLYRFVREE+GTE LTGE+ SP
Sbjct: 391 DNGTSAIPNRIKECRSYPLYRFVREELGTELLTGEKVTSP 272
Score = 48.3 bits (99), Expect(2) = 2e-021
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = +1 / -1
Query: 247 IDPLLECLKEWNGAPLPLC* 306
IDP++ECL EWNGAP+P+C*
Sbjct: 224 IDPMMECLNEWNGAPIPIC* 165
>gb|AV797825.1|AV797825 AV797825 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-13-P06 3',
mRNA sequence
Length = 429
Score = 76.2 bits (160), Expect(2) = 2e-021
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = +1 / -2
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
++G +PNRI+ECRSYPLYRFVREE+GTE LTGE+ SP
Sbjct: 410 DNGTSAIPNRIKECRSYPLYRFVREELGTELLTGEKVTSP 291
Score = 48.3 bits (99), Expect(2) = 2e-021
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = +1 / -2
Query: 247 IDPLLECLKEWNGAPLPLC* 306
IDP++ECL EWNGAP+P+C*
Sbjct: 242 IDPMMECLNEWNGAPIPIC* 183
>gb|BP794537.1|BP794537 BP794537 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-60-O10 3',
mRNA sequence
Length = 427
Score = 76.2 bits (160), Expect(2) = 2e-021
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = +1 / -2
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
++G +PNRI+ECRSYPLYRFVREE+GTE LTGE+ SP
Sbjct: 408 DNGTSAIPNRIKECRSYPLYRFVREELGTELLTGEKVTSP 289
Score = 48.3 bits (99), Expect(2) = 2e-021
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = +1 / -2
Query: 247 IDPLLECLKEWNGAPLPLC* 306
IDP++ECL EWNGAP+P+C*
Sbjct: 240 IDPMMECLNEWNGAPIPIC* 181
>gb|BP598055.1|BP598055 BP598055 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-02-A10 3',
mRNA sequence
Length = 420
Score = 76.2 bits (160), Expect(2) = 2e-021
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = +1 / -3
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
++G +PNRI+ECRSYPLYRFVREE+GTE LTGE+ SP
Sbjct: 406 DNGTSAIPNRIKECRSYPLYRFVREELGTELLTGEKVTSP 287
Score = 48.3 bits (99), Expect(2) = 2e-021
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = +1 / -3
Query: 247 IDPLLECLKEWNGAPLPLC* 306
IDP++ECL EWNGAP+P+C*
Sbjct: 238 IDPMMECLNEWNGAPIPIC* 179
>gb|AV803304.1|AV803304 AV803304 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-35-A21 3',
mRNA sequence
Length = 409
Score = 76.2 bits (160), Expect(2) = 2e-021
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = +1 / -1
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
++G +PNRI+ECRSYPLYRFVREE+GTE LTGE+ SP
Sbjct: 388 DNGTSAIPNRIKECRSYPLYRFVREELGTELLTGEKVTSP 269
Score = 48.3 bits (99), Expect(2) = 2e-021
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = +1 / -1
Query: 247 IDPLLECLKEWNGAPLPLC* 306
IDP++ECL EWNGAP+P+C*
Sbjct: 220 IDPMMECLNEWNGAPIPIC* 161
>gb|AV820059.1|AV820059 AV820059 RAFL11 Arabidopsis thaliana cDNA clone RAFL11-08-H24 3',
mRNA sequence
Length = 411
Score = 76.2 bits (160), Expect(2) = 2e-021
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = +1 / -3
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
++G +PNRI+ECRSYPLYRFVREE+GTE LTGE+ SP
Sbjct: 388 DNGTSAIPNRIKECRSYPLYRFVREELGTELLTGEKVTSP 269
Score = 48.3 bits (99), Expect(2) = 2e-021
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = +1 / -3
Query: 247 IDPLLECLKEWNGAPLPLC* 306
IDP++ECL EWNGAP+P+C*
Sbjct: 220 IDPMMECLNEWNGAPIPIC* 161
>gb|AV814576.1|AV814576 AV814576 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-83-H11 3',
mRNA sequence
Length = 405
Score = 76.2 bits (160), Expect(2) = 2e-021
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = +1 / -1
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
++G +PNRI+ECRSYPLYRFVREE+GTE LTGE+ SP
Sbjct: 390 DNGTSAIPNRIKECRSYPLYRFVREELGTELLTGEKVTSP 271
Score = 48.3 bits (99), Expect(2) = 2e-021
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = +1 / -1
Query: 247 IDPLLECLKEWNGAPLPLC* 306
IDP++ECL EWNGAP+P+C*
Sbjct: 222 IDPMMECLNEWNGAPIPIC* 163
>gb|BP577255.1|BP577255 BP577255 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-95-P21 3',
mRNA sequence
Length = 398
Score = 76.2 bits (160), Expect(2) = 2e-021
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = +1 / -3
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
++G +PNRI+ECRSYPLYRFVREE+GTE LTGE+ SP
Sbjct: 390 DNGTSAIPNRIKECRSYPLYRFVREELGTELLTGEKVTSP 271
Score = 47.8 bits (98), Expect(2) = 2e-021
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = +1 / -3
Query: 247 IDPLLECLKEWNGAPLPLC* 306
IDP++ECL EWNGAP+P+C*
Sbjct: 222 IDPMMECLHEWNGAPIPIC* 163
>gb|AY088956.1| Arabidopsis thaliana clone 110886 mRNA, complete sequence
Length = 2402
Score = 73.0 bits (153), Expect(2) = 3e-021
Identities = 28/39 (71%), Positives = 33/39 (84%)
Frame = +1 / +2
Query: 79 SGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
SG +PNRI+ECRSYPLYRFVREE+GT+ LTGE+ SP
Sbjct: 2033 SGTAPIPNRIKECRSYPLYRFVREELGTKLLTGEKVVSP 2149
Score = 50.6 bits (104), Expect(2) = 3e-021
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = +1 / +2
Query: 247 IDPLLECLKEWNGAPLPLC*AQL 315
IDPL++CLKEWNGAP+P+C* +
Sbjct: 2198 IDPLMDCLKEWNGAPIPIC*ESI 2266
>gb|AV564792.1|AV564792 AV564792 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ210h04F 3', mRNA sequence
Length = 410
Score = 74.4 bits (156), Expect(2) = 3e-021
Identities = 27/40 (67%), Positives = 34/40 (85%)
Frame = +1 / -3
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
++G +PNRI+ECRSYPLYRFVREE+GTE LTG++ SP
Sbjct: 342 DNGTSAIPNRIKECRSYPLYRFVREELGTELLTGKKVTSP 223
Score = 49.2 bits (101), Expect(2) = 3e-021
Identities = 16/20 (80%), Positives = 19/20 (95%)
Frame = +1 / -3
Query: 247 IDPLLECLKEWNGAPLPLC* 306
IDP++ECL EWNGAPLP+C*
Sbjct: 174 IDPMMECLNEWNGAPLPIC* 115
>gb|BP648305.1|BP648305 BP648305 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-78-I09 3',
mRNA sequence
Length = 418
Score = 73.0 bits (153), Expect(2) = 6e-021
Identities = 28/43 (65%), Positives = 32/43 (74%)
Frame = +1 / -3
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSPRRG 204
E G + NRI+ECRSYPLYRFVR+E+ TE LTGE RSP G
Sbjct: 392 EEGTSAIANRIKECRSYPLYRFVRDELNTELLTGENVRSPGEG 264
Score = 49.6 bits (102), Expect(2) = 6e-021
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = +1 / -3
Query: 247 IDPLLECLKEWNGAPLPLC*AQLS 318
IDPLLECLKEWNGAP+ +C* S
Sbjct: 224 IDPLLECLKEWNGAPVSIC*KSFS 153
>emb|AL132958.1|ATT4D2 Arabidopsis thaliana DNA chromosome 3, BAC clone T4D2
Length = 92611
Score = 71.6 bits (150), Expect(2) = 8e-021
Identities = 27/39 (69%), Positives = 33/39 (84%)
Frame = +1 / -1
Query: 79 SGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
+G +PNRI+ECRSYPLYRFVREE+GT+ LTGE+ SP
Sbjct: 68548 NGTAPIPNRIKECRSYPLYRFVREELGTKLLTGEKVVSP 68432
Score = 50.6 bits (104), Expect(2) = 8e-021
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = +1 / -1
Query: 247 IDPLLECLKEWNGAPLPLC*AQL 315
IDPL++CLKEWNGAP+P+C* +
Sbjct: 68383 IDPLMDCLKEWNGAPIPIC*ESI 68315
>gb|L33678.1|ATHPAL2 Arabidopsis thaliana (strain Columbia) phenylalanine ammonia-lyase
(PAL2) gene, complete cds
Length = 4507
Score = 71.6 bits (150), Expect(2) = 8e-021
Identities = 27/39 (69%), Positives = 33/39 (84%)
Frame = +1 / +2
Query: 79 SGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
+G +PNRI+ECRSYPLYRFVREE+GT+ LTGE+ SP
Sbjct: 3605 NGTAPIPNRIKECRSYPLYRFVREELGTKLLTGEKVVSP 3721
Score = 50.6 bits (104), Expect(2) = 8e-021
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = +1 / +2
Query: 247 IDPLLECLKEWNGAPLPLC*AQL 315
IDPL++CLKEWNGAP+P+C* +
Sbjct: 3770 IDPLMDCLKEWNGAPIPIC*ESI 3838
>ref|NM_115186.3| Arabidopsis thaliana PAL2; phenylalanine ammonia-lyase AT3G53260
(PAL2) mRNA, complete cds
Length = 2520
Score = 71.6 bits (150), Expect(2) = 8e-021
Identities = 27/39 (69%), Positives = 33/39 (84%)
Frame = +1 / +3
Query: 79 SGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
+G +PNRI+ECRSYPLYRFVREE+GT+ LTGE+ SP
Sbjct: 2091 NGTAPIPNRIKECRSYPLYRFVREELGTKLLTGEKVVSP 2207
Score = 50.6 bits (104), Expect(2) = 8e-021
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = +1 / +3
Query: 247 IDPLLECLKEWNGAPLPLC*AQL 315
IDPL++CLKEWNGAP+P+C* +
Sbjct: 2256 IDPLMDCLKEWNGAPIPIC*ESI 2324
>gb|AY092957.1| Arabidopsis thaliana phenylalanine ammonia-lyase (At3g53260) mRNA,
complete cds
Length = 2414
Score = 71.6 bits (150), Expect(2) = 8e-021
Identities = 27/39 (69%), Positives = 33/39 (84%)
Frame = +1 / +1
Query: 79 SGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
+G +PNRI+ECRSYPLYRFVREE+GT+ LTGE+ SP
Sbjct: 2032 NGTAPIPNRIKECRSYPLYRFVREELGTKLLTGEKVVSP 2148
Score = 50.6 bits (104), Expect(2) = 8e-021
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = +1 / +1
Query: 247 IDPLLECLKEWNGAPLPLC*AQL 315
IDPL++CLKEWNGAP+P+C* +
Sbjct: 2197 IDPLMDCLKEWNGAPIPIC*ESI 2265
>gb|AF367308.1| Arabidopsis thaliana AT3g53260/T4D2_190 mRNA, complete cds
Length = 2406
Score = 71.6 bits (150), Expect(2) = 8e-021
Identities = 27/39 (69%), Positives = 33/39 (84%)
Frame = +1 / +3
Query: 79 SGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
+G +PNRI+ECRSYPLYRFVREE+GT+ LTGE+ SP
Sbjct: 2034 NGTAPIPNRIKECRSYPLYRFVREELGTKLLTGEKVVSP 2150
Score = 50.6 bits (104), Expect(2) = 8e-021
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = +1 / +3
Query: 247 IDPLLECLKEWNGAPLPLC*AQL 315
IDPL++CLKEWNGAP+P+C* +
Sbjct: 2199 IDPLMDCLKEWNGAPIPIC*ESI 2267
>gb|BT000035.1| Arabidopsis thaliana phenylalanine ammonia-lyase (At3g53260) mRNA,
complete cds
Length = 2260
Score = 71.6 bits (150), Expect(2) = 8e-021
Identities = 27/39 (69%), Positives = 33/39 (84%)
Frame = +1 / +1
Query: 79 SGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
+G +PNRI+ECRSYPLYRFVREE+GT+ LTGE+ SP
Sbjct: 1930 NGTAPIPNRIKECRSYPLYRFVREELGTKLLTGEKVVSP 2046
Score = 50.6 bits (104), Expect(2) = 8e-021
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = +1 / +1
Query: 247 IDPLLECLKEWNGAPLPLC*AQL 315
IDPL++CLKEWNGAP+P+C* +
Sbjct: 2095 IDPLMDCLKEWNGAPIPIC*ESI 2163
>gb|BX835465.1|BX835465 BX835465 Arabidopsis thaliana Adult vegetative tissue Col-0
Arabidopsis thaliana cDNA clone GSLTLS12ZG08 3PRIM, mRNA
sequence
Length = 1006
Score = 71.6 bits (150), Expect(2) = 8e-021
Identities = 27/39 (69%), Positives = 33/39 (84%)
Frame = +1 / -2
Query: 79 SGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
+G +PNRI+ECRSYPLYRFVREE+GT+ LTGE+ SP
Sbjct: 354 NGTAPIPNRIKECRSYPLYRFVREELGTKLLTGEKVVSP 238
Score = 50.6 bits (104), Expect(2) = 8e-021
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = +1 / -2
Query: 247 IDPLLECLKEWNGAPLPLC*AQL 315
IDPL++CLKEWNGAP+P+C* +
Sbjct: 189 IDPLMDCLKEWNGAPIPIC*ESI 121
>gb|AV782312.1|AV782312 AV782312 RAFL4 Arabidopsis thaliana cDNA clone RAFL04-16-D08 3',
mRNA sequence
Length = 694
Score = 71.6 bits (150), Expect(2) = 8e-021
Identities = 27/39 (69%), Positives = 33/39 (84%)
Frame = +1 / -3
Query: 79 SGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
+G +PNRI+ECRSYPLYRFVREE+GT+ LTGE+ SP
Sbjct: 383 NGTAPIPNRIKECRSYPLYRFVREELGTKLLTGEKVVSP 267
Score = 50.6 bits (104), Expect(2) = 8e-021
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = +1 / -3
Query: 247 IDPLLECLKEWNGAPLPLC*AQL 315
IDPL++CLKEWNGAP+P+C* +
Sbjct: 218 IDPLMDCLKEWNGAPIPIC*ESI 150
>gb|AV544717.1|AV544717 AV544717 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ56a09F 3', mRNA sequence
Length = 650
Score = 71.6 bits (150), Expect(2) = 8e-021
Identities = 27/39 (69%), Positives = 33/39 (84%)
Frame = +1 / -2
Query: 79 SGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
+G +PNRI+ECRSYPLYRFVREE+GT+ LTGE+ SP
Sbjct: 427 NGTAPIPNRIKECRSYPLYRFVREELGTKLLTGEKVVSP 311
Score = 50.6 bits (104), Expect(2) = 8e-021
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = +1 / -2
Query: 247 IDPLLECLKEWNGAPLPLC*AQL 315
IDPL++CLKEWNGAP+P+C* +
Sbjct: 262 IDPLMDCLKEWNGAPIPIC*ESI 194
>gb|AV544960.1|AV544960 AV544960 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ65f09F 3', mRNA sequence
Length = 651
Score = 71.6 bits (150), Expect(2) = 8e-021
Identities = 27/39 (69%), Positives = 33/39 (84%)
Frame = +1 / -2
Query: 79 SGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
+G +PNRI+ECRSYPLYRFVREE+GT+ LTGE+ SP
Sbjct: 341 NGTAPIPNRIKECRSYPLYRFVREELGTKLLTGEKVVSP 225
Score = 50.6 bits (104), Expect(2) = 8e-021
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = +1 / -2
Query: 247 IDPLLECLKEWNGAPLPLC*AQL 315
IDPL++CLKEWNGAP+P+C* +
Sbjct: 176 IDPLMDCLKEWNGAPIPIC*ESI 108
>gb|AI997452.1|AI997452 701554008 A. thaliana, Columbia Col-0, root-2 Arabidopsis thaliana
cDNA clone 701554008, mRNA sequence
Length = 639
Score = 71.6 bits (150), Expect(2) = 8e-021
Identities = 27/39 (69%), Positives = 33/39 (84%)
Frame = +1 / -3
Query: 79 SGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
+G +PNRI+ECRSYPLYRFVREE+GT+ LTGE+ SP
Sbjct: 400 NGTAPIPNRIKECRSYPLYRFVREELGTKLLTGEKVVSP 284
Score = 50.6 bits (104), Expect(2) = 8e-021
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = +1 / -3
Query: 247 IDPLLECLKEWNGAPLPLC*AQL 315
IDPL++CLKEWNGAP+P+C* +
Sbjct: 235 IDPLMDCLKEWNGAPIPIC*ESI 167
>gb|AV524210.1|AV524210 AV524210 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZL57f08F 3', mRNA
sequence
Length = 639
Score = 71.6 bits (150), Expect(2) = 8e-021
Identities = 27/39 (69%), Positives = 33/39 (84%)
Frame = +1 / -3
Query: 79 SGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
+G +PNRI+ECRSYPLYRFVREE+GT+ LTGE+ SP
Sbjct: 337 NGTAPIPNRIKECRSYPLYRFVREELGTKLLTGEKVVSP 221
Score = 50.6 bits (104), Expect(2) = 8e-021
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = +1 / -3
Query: 247 IDPLLECLKEWNGAPLPLC*AQL 315
IDPL++CLKEWNGAP+P+C* +
Sbjct: 172 IDPLMDCLKEWNGAPIPIC*ESI 104
>gb|AV558603.1|AV558603 AV558603 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ102g03F 3', mRNA sequence
Length = 589
Score = 71.6 bits (150), Expect(2) = 8e-021
Identities = 27/39 (69%), Positives = 33/39 (84%)
Frame = +1 / -1
Query: 79 SGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
+G +PNRI+ECRSYPLYRFVREE+GT+ LTGE+ SP
Sbjct: 370 NGTAPIPNRIKECRSYPLYRFVREELGTKLLTGEKVVSP 254
Score = 50.6 bits (104), Expect(2) = 8e-021
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = +1 / -1
Query: 247 IDPLLECLKEWNGAPLPLC*AQL 315
IDPL++CLKEWNGAP+P+C* +
Sbjct: 205 IDPLMDCLKEWNGAPIPIC*ESI 137
>gb|BE662969.1|BE662969 EST00113 Arabidopsis Acute Ozone Forward-Subtracted Library
Arabidopsis thaliana cDNA clone AtAOzF26 similar to
phenylalanine ammonia lyase PAL2, mRNA sequence
Length = 529
Score = 71.6 bits (150), Expect(2) = 8e-021
Identities = 27/39 (69%), Positives = 33/39 (84%)
Frame = +1 / +1
Query: 79 SGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
+G +PNRI+ECRSYPLYRFVREE+GT+ LTGE+ SP
Sbjct: 154 NGTAPIPNRIKECRSYPLYRFVREELGTKLLTGEKVVSP 270
Score = 50.6 bits (104), Expect(2) = 8e-021
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = +1 / +1
Query: 247 IDPLLECLKEWNGAPLPLC*AQL 315
IDPL++CLKEWNGAP+P+C* +
Sbjct: 319 IDPLMDCLKEWNGAPIPIC*ESI 387
>gb|AV555308.1|AV555308 AV555308 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ011d06F 3', mRNA sequence
Length = 526
Score = 71.6 bits (150), Expect(2) = 8e-021
Identities = 27/39 (69%), Positives = 33/39 (84%)
Frame = +1 / -3
Query: 79 SGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
+G +PNRI+ECRSYPLYRFVREE+GT+ LTGE+ SP
Sbjct: 395 NGTAPIPNRIKECRSYPLYRFVREELGTKLLTGEKVVSP 279
Score = 50.6 bits (104), Expect(2) = 8e-021
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = +1 / -3
Query: 247 IDPLLECLKEWNGAPLPLC*AQL 315
IDPL++CLKEWNGAP+P+C* +
Sbjct: 230 IDPLMDCLKEWNGAPIPIC*ESI 162
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,112,913,189
Number of Sequences: 1013581
Number of extensions: 14372045
Number of successful extensions: 140034
Number of sequences better than 1.0e-020: 71
length of database: 302,980,290
effective HSP length: 55
effective length of database: 247,233,335
effective search space used: 38815633595
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)