TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3713139.2.1
(487 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AV785229.1|AV785229 AV785229 RAFL6 Arabidopsis thaliana ... 154 2e-036
gb|AV566422.1|AV566422 AV566422 Arabidopsis thaliana green ... 154 2e-036
gb|BP786700.1|BP786700 BP786700 RAFL7 Arabidopsis thaliana ... 154 2e-036
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 154 2e-036
gb|AY070758.1| Arabidopsis thaliana At1g26570/T1K7_6 mRNA, ... 154 2e-036
gb|AY143922.1| Arabidopsis thaliana At1g26570/T1K7_6 mRNA, ... 154 2e-036
gb|AY084436.1| Arabidopsis thaliana clone 108221 mRNA, comp... 154 2e-036
gb|AC013427.3|T1K7 Sequence of BAC T1K7 from Arabidopsis th... 154 2e-036
emb|BX814676.1|CNS0AAJL Arabidopsis thaliana Full-length cD... 154 2e-036
ref|NM_102419.3| Arabidopsis thaliana UDP-glucose 6-dehydro... 154 2e-036
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 154 2e-036
gb|BZ292018.1|BZ292018 SALK_122961.42.20.x Arabidopsis thal... 150 2e-035
gb|AV555903.1|AV555903 AV555903 Arabidopsis thaliana green ... 150 3e-035
gb|AV545118.1|AV545118 AV545118 Arabidopsis thaliana roots ... 149 4e-035
gb|AV556752.1|AV556752 AV556752 Arabidopsis thaliana green ... 149 4e-035
gb|AV563562.1|AV563562 AV563562 Arabidopsis thaliana green ... 149 4e-035
gb|AF424576.1|AF424576 Arabidopsis thaliana AT3g29360/MUO10... 149 4e-035
gb|AY088902.1| Arabidopsis thaliana clone 9930 mRNA, comple... 149 4e-035
dbj|AP001309.1| Arabidopsis thaliana genomic DNA, chromosom... 149 4e-035
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 149 4e-035
gb|BT021126.1| Arabidopsis thaliana At3g29360 gene, complet... 149 4e-035
ref|NM_113861.2| Arabidopsis thaliana UDP-glucose 6-dehydro... 149 4e-035
ref|NM_001035715.1| Arabidopsis thaliana UDP-glucose 6-dehy... 149 4e-035
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 149 4e-035
gb|AV538587.1|AV538587 AV538587 Arabidopsis thaliana roots ... 149 5e-035
gb|AV541943.1|AV541943 AV541943 Arabidopsis thaliana roots ... 149 5e-035
gb|AV542896.1|AV542896 AV542896 Arabidopsis thaliana roots ... 149 5e-035
gb|AV549412.1|AV549412 AV549412 Arabidopsis thaliana roots ... 149 5e-035
gb|AV555612.1|AV555612 AV555612 Arabidopsis thaliana green ... 149 5e-035
gb|AV555633.1|AV555633 AV555633 Arabidopsis thaliana green ... 149 5e-035
gb|AV561460.1|AV561460 AV561460 Arabidopsis thaliana green ... 149 5e-035
gb|AV566156.1|AV566156 AV566156 Arabidopsis thaliana green ... 149 5e-035
gb|AV567064.1|AV567064 AV567064 Arabidopsis thaliana green ... 149 5e-035
dbj|AB009054.1| Arabidopsis thaliana genomic DNA, chromosom... 149 5e-035
ref|NM_123294.2| Arabidopsis thaliana UDP-glucose 6-dehydro... 149 5e-035
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 149 5e-035
gb|AV817872.1|AV817872 AV817872 RAFL9 Arabidopsis thaliana ... 149 5e-035
gb|AV547150.1|AV547150 AV547150 Arabidopsis thaliana roots ... 149 5e-035
gb|BP581447.1|BP581447 BP581447 RAFL14 Arabidopsis thaliana... 149 5e-035
gb|BP789849.1|BP789849 BP789849 RAFL7 Arabidopsis thaliana ... 149 5e-035
gb|AV791275.1|AV791275 AV791275 RAFL7 Arabidopsis thaliana ... 148 1e-034
gb|AI998845.1|AI998845 701547096 A. thaliana, Columbia Col-... 147 2e-034
gb|AV535151.1|AV535151 AV535151 Arabidopsis thaliana flower... 147 2e-034
gb|AV543899.1|AV543899 AV543899 Arabidopsis thaliana roots ... 147 2e-034
gb|AV545316.1|AV545316 AV545316 Arabidopsis thaliana roots ... 147 2e-034
gb|AV549693.1|AV549693 AV549693 Arabidopsis thaliana roots ... 147 2e-034
gb|AV555725.1|AV555725 AV555725 Arabidopsis thaliana green ... 147 2e-034
gb|AY056200.1| Arabidopsis thaliana putative UDP-glucose de... 147 2e-034
gb|BT006380.1| Arabidopsis thaliana At5g39320 gene, complet... 147 2e-034
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 147 2e-034
emb|AL391143.1|ATT20K14 Arabidopsis thaliana DNA chromosome... 147 2e-034
ref|NM_121553.2| Arabidopsis thaliana UDP-glucose 6-dehydro... 147 2e-034
gb|BP597510.1|BP597510 BP597510 RAFL15 Arabidopsis thaliana... 147 2e-034
gb|AI999756.1|AI999756 701557309 A. thaliana, Columbia Col-... 147 3e-034
emb|CQ805158.1| Sequence 1569 from Patent WO2004035798 147 3e-034
gb|BT015794.1| Arabidopsis thaliana At5g15490 mRNA, complet... 147 3e-034
gb|AV791268.1|AV791268 AV791268 RAFL7 Arabidopsis thaliana ... 145 7e-034
gb|BP564042.1|BP564042 BP564042 RAFL14 Arabidopsis thaliana... 143 4e-033
emb|BX816266.1|CNS0ABUF Arabidopsis thaliana Full-length cD... 139 6e-032
gb|AV819150.1|AV819150 AV819150 RAFL11 Arabidopsis thaliana... 137 2e-031
emb|BX817654.1|CNS0AAWE Arabidopsis thaliana Full-length cD... 100 3e-031
gb|AV540696.1|AV540696 AV540696 Arabidopsis thaliana roots ... 136 4e-031
gb|BP641008.1|BP641008 BP641008 RAFL19 Arabidopsis thaliana... 136 4e-031
gb|AV819945.1|AV819945 AV819945 RAFL11 Arabidopsis thaliana... 135 1e-030
gb|BP606879.1|BP606879 BP606879 RAFL16 Arabidopsis thaliana... 131 1e-029
gb|BP785119.1|BP785119 BP785119 RAFL7 Arabidopsis thaliana ... 131 1e-029
gb|BP787058.1|BP787058 BP787058 RAFL7 Arabidopsis thaliana ... 131 1e-029
gb|BP594721.1|BP594721 BP594721 RAFL15 Arabidopsis thaliana... 130 2e-029
gb|BP601474.1|BP601474 BP601474 RAFL16 Arabidopsis thaliana... 131 2e-029
gb|BP786642.1|BP786642 BP786642 RAFL7 Arabidopsis thaliana ... 130 2e-029
gb|AV792950.1|AV792950 AV792950 RAFL7 Arabidopsis thaliana ... 130 3e-029
gb|BP594499.1|BP594499 BP594499 RAFL15 Arabidopsis thaliana... 129 5e-029
gb|BP572018.1|BP572018 BP572018 RAFL14 Arabidopsis thaliana... 129 6e-029
gb|BP591896.1|BP591896 BP591896 RAFL15 Arabidopsis thaliana... 129 6e-029
gb|BP601737.1|BP601737 BP601737 RAFL16 Arabidopsis thaliana... 129 6e-029
gb|BP565252.1|BP565252 BP565252 RAFL14 Arabidopsis thaliana... 128 8e-029
gb|AC008261.5|ATAC008261 Arabidopsis thaliana chromosome II... 128 8e-029
ref|NM_110966.1| Arabidopsis thaliana oxidoreductase, actin... 128 8e-029
gb|BP593999.1|BP593999 BP593999 RAFL15 Arabidopsis thaliana... 128 9e-029
gb|BP592120.1|BP592120 BP592120 RAFL15 Arabidopsis thaliana... 127 2e-028
gb|BP594118.1|BP594118 BP594118 RAFL15 Arabidopsis thaliana... 127 2e-028
gb|BP592566.1|BP592566 BP592566 RAFL15 Arabidopsis thaliana... 78 3e-028
gb|AV536531.1|AV536531 AV536531 Arabidopsis thaliana liquid... 126 6e-028
gb|BP662223.1|BP662223 BP662223 RAFL21 Arabidopsis thaliana... 124 1e-027
gb|BP568523.1|BP568523 BP568523 RAFL14 Arabidopsis thaliana... 112 2e-027
gb|BP584381.1|BP584381 BP584381 RAFL14 Arabidopsis thaliana... 123 4e-027
gb|BP606627.1|BP606627 BP606627 RAFL16 Arabidopsis thaliana... 123 4e-027
gb|BP782998.1|BP782998 BP782998 RAFL7 Arabidopsis thaliana ... 123 4e-027
gb|BP618854.1|BP618854 BP618854 RAFL16 Arabidopsis thaliana... 123 4e-027
gb|AV810707.1|AV810707 AV810707 RAFL9 Arabidopsis thaliana ... 122 5e-027
gb|AV562122.1|AV562122 AV562122 Arabidopsis thaliana green ... 122 5e-027
gb|BP594112.1|BP594112 BP594112 RAFL15 Arabidopsis thaliana... 122 5e-027
gb|BP592268.1|BP592268 BP592268 RAFL15 Arabidopsis thaliana... 122 5e-027
gb|BP566061.1|BP566061 BP566061 RAFL14 Arabidopsis thaliana... 122 1e-026
gb|BP576887.1|BP576887 BP576887 RAFL14 Arabidopsis thaliana... 122 1e-026
gb|BP600102.1|BP600102 BP600102 RAFL16 Arabidopsis thaliana... 122 1e-026
gb|BP606946.1|BP606946 BP606946 RAFL16 Arabidopsis thaliana... 122 1e-026
gb|AV814170.1|AV814170 AV814170 RAFL9 Arabidopsis thaliana ... 99 2e-026
gb|BP790002.1|BP790002 BP790002 RAFL7 Arabidopsis thaliana ... 121 2e-026
gb|BP794296.1|BP794296 BP794296 RAFL7 Arabidopsis thaliana ... 120 3e-026
gb|AV817612.1|AV817612 AV817612 RAFL9 Arabidopsis thaliana ... 120 3e-026
gb|BP611722.1|BP611722 BP611722 RAFL16 Arabidopsis thaliana... 119 5e-026
gb|BP667896.1|BP667896 BP667896 RAFL21 Arabidopsis thaliana... 100 6e-026
gb|BP584642.1|BP584642 BP584642 RAFL14 Arabidopsis thaliana... 69 8e-026
gb|BP785971.1|BP785971 BP785971 RAFL7 Arabidopsis thaliana ... 117 2e-025
gb|BP595172.1|BP595172 BP595172 RAFL15 Arabidopsis thaliana... 79 2e-025
gb|BP794766.1|BP794766 BP794766 RAFL7 Arabidopsis thaliana ... 116 6e-025
gb|BP635173.1|BP635173 BP635173 RAFL17 Arabidopsis thaliana... 116 6e-025
gb|BP570637.1|BP570637 BP570637 RAFL14 Arabidopsis thaliana... 114 2e-024
gb|BP794950.1|BP794950 BP794950 RAFL7 Arabidopsis thaliana ... 113 4e-024
gb|BP583801.1|BP583801 BP583801 RAFL14 Arabidopsis thaliana... 111 1e-023
gb|BP577030.1|BP577030 BP577030 RAFL14 Arabidopsis thaliana... 111 2e-023
gb|B09996.1|B09996 T21N18-Sp6 TAMU Arabidopsis thaliana gen... 98 2e-023
gb|BP779032.1|BP779032 BP779032 RAFL7 Arabidopsis thaliana ... 110 3e-023
gb|BP646220.1|BP646220 BP646220 RAFL19 Arabidopsis thaliana... 110 4e-023
gb|BP792135.1|BP792135 BP792135 RAFL7 Arabidopsis thaliana ... 108 1e-022
gb|BP795121.1|BP795121 BP795121 RAFL7 Arabidopsis thaliana ... 108 1e-022
gb|BP594921.1|BP594921 BP594921 RAFL15 Arabidopsis thaliana... 107 2e-022
gb|BP777605.1|BP777605 BP777605 RAFL7 Arabidopsis thaliana ... 107 2e-022
gb|BP603949.1|BP603949 BP603949 RAFL16 Arabidopsis thaliana... 107 2e-022
gb|BP593947.1|BP593947 BP593947 RAFL15 Arabidopsis thaliana... 107 3e-022
gb|BP781798.1|BP781798 BP781798 RAFL7 Arabidopsis thaliana ... 105 7e-022
gb|AV818722.1|AV818722 AV818722 RAFL9 Arabidopsis thaliana ... 105 8e-022
gb|BP628504.1|BP628504 BP628504 RAFL17 Arabidopsis thaliana... 105 1e-021
gb|BP610312.1|BP610312 BP610312 RAFL16 Arabidopsis thaliana... 73 2e-021
gb|AU226212.1|AU226212 AU226212 RAFL14 Arabidopsis thaliana... 85 3e-021
gb|AV554391.1|AV554391 AV554391 Arabidopsis thaliana roots ... 103 3e-021
gb|AV566931.1|AV566931 AV566931 Arabidopsis thaliana green ... 103 3e-021
gb|BP646077.1|BP646077 BP646077 RAFL19 Arabidopsis thaliana... 102 8e-021
>gb|AV785229.1|AV785229 AV785229 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-13-F23 3',
mRNA sequence
Length = 537
Score = 154 bits (330), Expect = 2e-036
Identities = 57/76 (75%), Positives = 68/76 (89%)
Frame = -3 / -2
Query: 485 AYEAARDAHAVCILAEWDEFRTLDYKRMFDAMHKPAFIFDGRNVVDXAKLREIGFVVYAI 306
AYEA +DAH +C+L EWDEF++LD+K++FD M KPAF+FDGRNVVD KLREIGF+VY+I
Sbjct: 371 AYEATKDAHGLCVLTEWDEFKSLDFKKIFDNMQKPAFVFDGRNVVDAVKLREIGFIVYSI 192
Query: 305 GKPLDDWLKDMPAVA* 258
GKPLD WLKDMPAVA*
Sbjct: 191 GKPLDSWLKDMPAVA* 144
>gb|AV566422.1|AV566422 AV566422 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ243b05F 3', mRNA sequence
Length = 420
Score = 154 bits (330), Expect = 2e-036
Identities = 57/76 (75%), Positives = 68/76 (89%)
Frame = -3 / -2
Query: 485 AYEAARDAHAVCILAEWDEFRTLDYKRMFDAMHKPAFIFDGRNVVDXAKLREIGFVVYAI 306
AYEA +DAH +C+L EWDEF++LD+K++FD M KPAF+FDGRNVVD KLREIGF+VY+I
Sbjct: 374 AYEATKDAHGLCVLTEWDEFKSLDFKKIFDNMQKPAFVFDGRNVVDAVKLREIGFIVYSI 195
Query: 305 GKPLDDWLKDMPAVA* 258
GKPLD WLKDMPAVA*
Sbjct: 194 GKPLDSWLKDMPAVA* 147
>gb|BP786700.1|BP786700 BP786700 RAFL7 Arabidopsis thaliana cDNA clone RAFL26-01-F16 3',
mRNA sequence
Length = 435
Score = 154 bits (330), Expect = 2e-036
Identities = 57/76 (75%), Positives = 68/76 (89%)
Frame = -3 / -2
Query: 485 AYEAARDAHAVCILAEWDEFRTLDYKRMFDAMHKPAFIFDGRNVVDXAKLREIGFVVYAI 306
AYEA +DAH +C+L EWDEF++LD+K++FD M KPAF+FDGRNVVD KLREIGF+VY+I
Sbjct: 371 AYEATKDAHGLCVLTEWDEFKSLDFKKIFDNMQKPAFVFDGRNVVDAVKLREIGFIVYSI 192
Query: 305 GKPLDDWLKDMPAVA* 258
GKPLD WLKDMPAVA*
Sbjct: 191 GKPLDSWLKDMPAVA* 144
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 154 bits (330), Expect = 2e-036
Identities = 57/76 (75%), Positives = 68/76 (89%)
Frame = -3 / +2
Query: 485 AYEAARDAHAVCILAEWDEFRTLDYKRMFDAMHKPAFIFDGRNVVDXAKLREIGFVVYAI 306
AYEA +DAH +C+L EWDEF++LD+K++FD M KPAF+FDGRNVVD KLREIGF+VY+I
Sbjct: 9192626 AYEATKDAHGLCVLTEWDEFKSLDFKKIFDNMQKPAFVFDGRNVVDAVKLREIGFIVYSI 9192805
Query: 305 GKPLDDWLKDMPAVA* 258
GKPLD WLKDMPAVA*
Sbjct: 9192806 GKPLDSWLKDMPAVA* 9192853
>gb|AY070758.1| Arabidopsis thaliana At1g26570/T1K7_6 mRNA, complete cds
Length = 1707
Score = 154 bits (330), Expect = 2e-036
Identities = 57/76 (75%), Positives = 68/76 (89%)
Frame = -3 / +2
Query: 485 AYEAARDAHAVCILAEWDEFRTLDYKRMFDAMHKPAFIFDGRNVVDXAKLREIGFVVYAI 306
AYEA +DAH +C+L EWDEF++LD+K++FD M KPAF+FDGRNVVD KLREIGF+VY+I
Sbjct: 1337 AYEATKDAHGLCVLTEWDEFKSLDFKKIFDNMQKPAFVFDGRNVVDAVKLREIGFIVYSI 1516
Query: 305 GKPLDDWLKDMPAVA* 258
GKPLD WLKDMPAVA*
Sbjct: 1517 GKPLDSWLKDMPAVA* 1564
>gb|AY143922.1| Arabidopsis thaliana At1g26570/T1K7_6 mRNA, complete cds
Length = 1446
Score = 154 bits (330), Expect = 2e-036
Identities = 57/76 (75%), Positives = 68/76 (89%)
Frame = -3 / +1
Query: 485 AYEAARDAHAVCILAEWDEFRTLDYKRMFDAMHKPAFIFDGRNVVDXAKLREIGFVVYAI 306
AYEA +DAH +C+L EWDEF++LD+K++FD M KPAF+FDGRNVVD KLREIGF+VY+I
Sbjct: 1219 AYEATKDAHGLCVLTEWDEFKSLDFKKIFDNMQKPAFVFDGRNVVDAVKLREIGFIVYSI 1398
Query: 305 GKPLDDWLKDMPAVA* 258
GKPLD WLKDMPAVA*
Sbjct: 1399 GKPLDSWLKDMPAVA* 1446
>gb|AY084436.1| Arabidopsis thaliana clone 108221 mRNA, complete sequence
Length = 1706
Score = 154 bits (330), Expect = 2e-036
Identities = 57/76 (75%), Positives = 68/76 (89%)
Frame = -3 / +1
Query: 485 AYEAARDAHAVCILAEWDEFRTLDYKRMFDAMHKPAFIFDGRNVVDXAKLREIGFVVYAI 306
AYEA +DAH +C+L EWDEF++LD+K++FD M KPAF+FDGRNVVD KLREIGF+VY+I
Sbjct: 1336 AYEATKDAHGLCVLTEWDEFKSLDFKKIFDNMQKPAFVFDGRNVVDAVKLREIGFIVYSI 1515
Query: 305 GKPLDDWLKDMPAVA* 258
GKPLD WLKDMPAVA*
Sbjct: 1516 GKPLDSWLKDMPAVA* 1563
>gb|AC013427.3|T1K7 Sequence of BAC T1K7 from Arabidopsis thaliana chromosome 1, complete
sequence
Length = 89473
Score = 154 bits (330), Expect = 2e-036
Identities = 57/76 (75%), Positives = 68/76 (89%)
Frame = -3 / -3
Query: 485 AYEAARDAHAVCILAEWDEFRTLDYKRMFDAMHKPAFIFDGRNVVDXAKLREIGFVVYAI 306
AYEA +DAH +C+L EWDEF++LD+K++FD M KPAF+FDGRNVVD KLREIGF+VY+I
Sbjct: 16424 AYEATKDAHGLCVLTEWDEFKSLDFKKIFDNMQKPAFVFDGRNVVDAVKLREIGFIVYSI 16245
Query: 305 GKPLDDWLKDMPAVA* 258
GKPLD WLKDMPAVA*
Sbjct: 16244 GKPLDSWLKDMPAVA* 16197
>emb|BX814676.1|CNS0AAJL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB89ZA07 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1649
Score = 154 bits (330), Expect = 2e-036
Identities = 57/76 (75%), Positives = 68/76 (89%)
Frame = -3 / +1
Query: 485 AYEAARDAHAVCILAEWDEFRTLDYKRMFDAMHKPAFIFDGRNVVDXAKLREIGFVVYAI 306
AYEA +DAH +C+L EWDEF++LD+K++FD M KPAF+FDGRNVVD KLREIGF+VY+I
Sbjct: 1324 AYEATKDAHGLCVLTEWDEFKSLDFKKIFDNMQKPAFVFDGRNVVDAVKLREIGFIVYSI 1503
Query: 305 GKPLDDWLKDMPAVA* 258
GKPLD WLKDMPAVA*
Sbjct: 1504 GKPLDSWLKDMPAVA* 1551
>ref|NM_102419.3| Arabidopsis thaliana UDP-glucose 6-dehydrogenase AT1G26570 mRNA,
complete cds
Length = 1712
Score = 154 bits (330), Expect = 2e-036
Identities = 57/76 (75%), Positives = 68/76 (89%)
Frame = -3 / +3
Query: 485 AYEAARDAHAVCILAEWDEFRTLDYKRMFDAMHKPAFIFDGRNVVDXAKLREIGFVVYAI 306
AYEA +DAH +C+L EWDEF++LD+K++FD M KPAF+FDGRNVVD KLREIGF+VY+I
Sbjct: 1338 AYEATKDAHGLCVLTEWDEFKSLDFKKIFDNMQKPAFVFDGRNVVDAVKLREIGFIVYSI 1517
Query: 305 GKPLDDWLKDMPAVA* 258
GKPLD WLKDMPAVA*
Sbjct: 1518 GKPLDSWLKDMPAVA* 1565
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 154 bits (330), Expect = 2e-036
Identities = 57/76 (75%), Positives = 68/76 (89%)
Frame = -3 / +1
Query: 485 AYEAARDAHAVCILAEWDEFRTLDYKRMFDAMHKPAFIFDGRNVVDXAKLREIGFVVYAI 306
AYEA +DAH +C+L EWDEF++LD+K++FD M KPAF+FDGRNVVD KLREIGF+VY+I
Sbjct: 9184006 AYEATKDAHGLCVLTEWDEFKSLDFKKIFDNMQKPAFVFDGRNVVDAVKLREIGFIVYSI 9184185
Query: 305 GKPLDDWLKDMPAVA* 258
GKPLD WLKDMPAVA*
Sbjct: 9184186 GKPLDSWLKDMPAVA* 9184233
>gb|BZ292018.1|BZ292018 SALK_122961.42.20.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_122961.42.20.x,
DNA sequence
Length = 372
Score = 150 bits (323), Expect = 2e-035
Identities = 56/76 (73%), Positives = 67/76 (88%)
Frame = -3 / -2
Query: 485 AYEAARDAHAVCILAEWDEFRTLDYKRMFDAMHKPAFIFDGRNVVDXAKLREIGFVVYAI 306
AYEA +DAH +C+L EWDEF++LD+K++FD M KPAF+FDGRNVVD KLREIGF+VY+I
Sbjct: 287 AYEATKDAHGLCVLTEWDEFKSLDFKKIFDNMQKPAFVFDGRNVVDAVKLREIGFIVYSI 108
Query: 305 GKPLDDWLKDMPAVA* 258
GKP D WLKDMPAVA*
Sbjct: 107 GKPPDSWLKDMPAVA* 60
>gb|AV555903.1|AV555903 AV555903 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ029b07F 3', mRNA sequence
Length = 506
Score = 150 bits (322), Expect = 3e-035
Identities = 56/76 (73%), Positives = 67/76 (88%)
Frame = -3 / -2
Query: 485 AYEAARDAHAVCILAEWDEFRTLDYKRMFDAMHKPAFIFDGRNVVDXAKLREIGFVVYAI 306
AYEA +DAH +C+L EWDEF++LD+K++F M KPAF+FDGRNVVD KLREIGF+VY+I
Sbjct: 370 AYEATKDAHGLCVLTEWDEFKSLDFKKIFANMQKPAFVFDGRNVVDAVKLREIGFIVYSI 191
Query: 305 GKPLDDWLKDMPAVA* 258
GKPLD WLKDMPAVA*
Sbjct: 190 GKPLDSWLKDMPAVA* 143
>gb|AV545118.1|AV545118 AV545118 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ72d08F 3', mRNA sequence
Length = 618
Score = 149 bits (321), Expect = 4e-035
Identities = 54/76 (71%), Positives = 68/76 (89%)
Frame = -3 / -2
Query: 485 AYEAARDAHAVCILAEWDEFRTLDYKRMFDAMHKPAFIFDGRNVVDXAKLREIGFVVYAI 306
AYEA +DAH +CI+ EWDEF+ LD++++FD M KPAF+FDGRN+++ KLREIGF+VY+I
Sbjct: 398 AYEATKDAHGICIMTEWDEFKNLDFQKIFDNMQKPAFVFDGRNIMNLQKLREIGFIVYSI 219
Query: 305 GKPLDDWLKDMPAVA* 258
GKPLDDWLKDMPAVA*
Sbjct: 218 GKPLDDWLKDMPAVA* 171
>gb|AV556752.1|AV556752 AV556752 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ051d06F 3', mRNA sequence
Length = 494
Score = 149 bits (321), Expect = 4e-035
Identities = 54/76 (71%), Positives = 68/76 (89%)
Frame = -3 / -2
Query: 485 AYEAARDAHAVCILAEWDEFRTLDYKRMFDAMHKPAFIFDGRNVVDXAKLREIGFVVYAI 306
AYEA +DAH +CI+ EWDEF+ LD++++FD M KPAF+FDGRN+++ KLREIGF+VY+I
Sbjct: 385 AYEATKDAHGICIMTEWDEFKNLDFQKIFDNMQKPAFVFDGRNIMNLQKLREIGFIVYSI 206
Query: 305 GKPLDDWLKDMPAVA* 258
GKPLDDWLKDMPAVA*
Sbjct: 205 GKPLDDWLKDMPAVA* 158
>gb|AV563562.1|AV563562 AV563562 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ189d12F 3', mRNA sequence
Length = 561
Score = 149 bits (321), Expect = 4e-035
Identities = 54/76 (71%), Positives = 68/76 (89%)
Frame = -3 / -1
Query: 485 AYEAARDAHAVCILAEWDEFRTLDYKRMFDAMHKPAFIFDGRNVVDXAKLREIGFVVYAI 306
AYEA +DAH +CI+ EWDEF+ LD++++FD M KPAF+FDGRN+++ KLREIGF+VY+I
Sbjct: 489 AYEATKDAHGICIMTEWDEFKNLDFQKIFDNMQKPAFVFDGRNIMNLQKLREIGFIVYSI 310
Query: 305 GKPLDDWLKDMPAVA* 258
GKPLDDWLKDMPAVA*
Sbjct: 309 GKPLDDWLKDMPAVA* 262
>gb|AF424576.1|AF424576 Arabidopsis thaliana AT3g29360/MUO10_6 mRNA, complete cds
Length = 1793
Score = 149 bits (321), Expect = 4e-035
Identities = 54/76 (71%), Positives = 68/76 (89%)
Frame = -3 / +1
Query: 485 AYEAARDAHAVCILAEWDEFRTLDYKRMFDAMHKPAFIFDGRNVVDXAKLREIGFVVYAI 306
AYEA +DAH +CI+ EWDEF+ LD++++FD M KPAF+FDGRN+++ KLREIGF+VY+I
Sbjct: 1282 AYEATKDAHGICIMTEWDEFKNLDFQKIFDNMQKPAFVFDGRNIMNLQKLREIGFIVYSI 1461
Query: 305 GKPLDDWLKDMPAVA* 258
GKPLDDWLKDMPAVA*
Sbjct: 1462 GKPLDDWLKDMPAVA* 1509
>gb|AY088902.1| Arabidopsis thaliana clone 9930 mRNA, complete sequence
Length = 1746
Score = 149 bits (321), Expect = 4e-035
Identities = 54/76 (71%), Positives = 68/76 (89%)
Frame = -3 / +1
Query: 485 AYEAARDAHAVCILAEWDEFRTLDYKRMFDAMHKPAFIFDGRNVVDXAKLREIGFVVYAI 306
AYEA +DAH +CI+ EWDEF+ LD++++FD M KPAF+FDGRN+++ KLREIGF+VY+I
Sbjct: 1282 AYEATKDAHGICIMTEWDEFKNLDFQKIFDNMQKPAFVFDGRNIMNLQKLREIGFIVYSI 1461
Query: 305 GKPLDDWLKDMPAVA* 258
GKPLDDWLKDMPAVA*
Sbjct: 1462 GKPLDDWLKDMPAVA* 1509
>dbj|AP001309.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MUO10
Length = 77589
Score = 149 bits (321), Expect = 4e-035
Identities = 54/76 (71%), Positives = 68/76 (89%)
Frame = -3 / -2
Query: 485 AYEAARDAHAVCILAEWDEFRTLDYKRMFDAMHKPAFIFDGRNVVDXAKLREIGFVVYAI 306
AYEA +DAH +CI+ EWDEF+ LD++++FD M KPAF+FDGRN+++ KLREIGF+VY+I
Sbjct: 17243 AYEATKDAHGICIMTEWDEFKNLDFQKIFDNMQKPAFVFDGRNIMNLQKLREIGFIVYSI 17064
Query: 305 GKPLDDWLKDMPAVA* 258
GKPLDDWLKDMPAVA*
Sbjct: 17063 GKPLDDWLKDMPAVA* 17016
>dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complete sequence
Length = 23403063
Score = 149 bits (321), Expect = 4e-035
Identities = 54/76 (71%), Positives = 68/76 (89%)
Frame = -3 / -2
Query: 485 AYEAARDAHAVCILAEWDEFRTLDYKRMFDAMHKPAFIFDGRNVVDXAKLREIGFVVYAI 306
AYEA +DAH +CI+ EWDEF+ LD++++FD M KPAF+FDGRN+++ KLREIGF+VY+I
Sbjct: 11188739 AYEATKDAHGICIMTEWDEFKNLDFQKIFDNMQKPAFVFDGRNIMNLQKLREIGFIVYSI 11188560
Query: 305 GKPLDDWLKDMPAVA* 258
GKPLDDWLKDMPAVA*
Sbjct: 11188559 GKPLDDWLKDMPAVA* 11188512
Score = 128 bits (275), Expect = 8e-029
Identities = 45/67 (67%), Positives = 57/67 (85%)
Frame = -3 / -3
Query: 485 AYEAARDAHAVCILAEWDEFRTLDYKRMFDAMHKPAFIFDGRNVVDXAKLREIGFVVYAI 306
AY A +DAH +C+L EWDE++TLDY+R+F+ M KPAF+FDGRNV D KLR+IGF+VY+I
Sbjct: 96004 AYAATKDAHGICLLTEWDEYKTLDYERIFENMQKPAFVFDGRNVFDAEKLRKIGFIVYSI 95825
Query: 305 GKPLDDW 285
GKPLD W
Sbjct: 95824 GKPLDQW 95804
>gb|BT021126.1| Arabidopsis thaliana At3g29360 gene, complete cds
Length = 1486
Score = 149 bits (321), Expect = 4e-035
Identities = 54/76 (71%), Positives = 68/76 (89%)
Frame = -3 / +2
Query: 485 AYEAARDAHAVCILAEWDEFRTLDYKRMFDAMHKPAFIFDGRNVVDXAKLREIGFVVYAI 306
AYEA +DAH +CI+ EWDEF+ LD++++FD M KPAF+FDGRN+++ KLREIGF+VY+I
Sbjct: 1229 AYEATKDAHGICIMTEWDEFKNLDFQKIFDNMQKPAFVFDGRNIMNLQKLREIGFIVYSI 1408
Query: 305 GKPLDDWLKDMPAVA* 258
GKPLDDWLKDMPAVA*
Sbjct: 1409 GKPLDDWLKDMPAVA* 1456
>ref|NM_113861.2| Arabidopsis thaliana UDP-glucose 6-dehydrogenase AT3G29360 transcript
variant AT3G29360.1 mRNA, complete cds
Length = 1793
Score = 149 bits (321), Expect = 4e-035
Identities = 54/76 (71%), Positives = 68/76 (89%)
Frame = -3 / +1
Query: 485 AYEAARDAHAVCILAEWDEFRTLDYKRMFDAMHKPAFIFDGRNVVDXAKLREIGFVVYAI 306
AYEA +DAH +CI+ EWDEF+ LD++++FD M KPAF+FDGRN+++ KLREIGF+VY+I
Sbjct: 1282 AYEATKDAHGICIMTEWDEFKNLDFQKIFDNMQKPAFVFDGRNIMNLQKLREIGFIVYSI 1461
Query: 305 GKPLDDWLKDMPAVA* 258
GKPLDDWLKDMPAVA*
Sbjct: 1462 GKPLDDWLKDMPAVA* 1509
>ref|NM_001035715.1| Arabidopsis thaliana UDP-glucose 6-dehydrogenase AT3G29360 transcript
variant AT3G29360.2 mRNA, complete cds
Length = 1790
Score = 149 bits (321), Expect = 4e-035
Identities = 54/76 (71%), Positives = 68/76 (89%)
Frame = -3 / +1
Query: 485 AYEAARDAHAVCILAEWDEFRTLDYKRMFDAMHKPAFIFDGRNVVDXAKLREIGFVVYAI 306
AYEA +DAH +CI+ EWDEF+ LD++++FD M KPAF+FDGRN+++ KLREIGF+VY+I
Sbjct: 1279 AYEATKDAHGICIMTEWDEFKNLDFQKIFDNMQKPAFVFDGRNIMNLQKLREIGFIVYSI 1458
Query: 305 GKPLDDWLKDMPAVA* 258
GKPLDDWLKDMPAVA*
Sbjct: 1459 GKPLDDWLKDMPAVA* 1506
>ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complete sequence
Length = 23470805
Score = 149 bits (321), Expect = 4e-035
Identities = 54/76 (71%), Positives = 68/76 (89%)
Frame = -3 / -1
Query: 485 AYEAARDAHAVCILAEWDEFRTLDYKRMFDAMHKPAFIFDGRNVVDXAKLREIGFVVYAI 306
AYEA +DAH +CI+ EWDEF+ LD++++FD M KPAF+FDGRN+++ KLREIGF+VY+I
Sbjct: 11268839 AYEATKDAHGICIMTEWDEFKNLDFQKIFDNMQKPAFVFDGRNIMNLQKLREIGFIVYSI 11268660
Query: 305 GKPLDDWLKDMPAVA* 258
GKPLDDWLKDMPAVA*
Sbjct: 11268659 GKPLDDWLKDMPAVA* 11268612
Score = 128 bits (275), Expect = 8e-029
Identities = 45/67 (67%), Positives = 57/67 (85%)
Frame = -3 / +2
Query: 485 AYEAARDAHAVCILAEWDEFRTLDYKRMFDAMHKPAFIFDGRNVVDXAKLREIGFVVYAI 306
AY A +DAH +C+L EWDE++TLDY+R+F+ M KPAF+FDGRNV D KLR+IGF+VY+I
Sbjct: 4604 AYAATKDAHGICLLTEWDEYKTLDYERIFENMQKPAFVFDGRNVFDAEKLRKIGFIVYSI 4783
Query: 305 GKPLDDW 285
GKPLD W
Sbjct: 4784 GKPLDQW 4804
>gb|AV538587.1|AV538587 AV538587 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ118h08F 3', mRNA sequence
Length = 602
Score = 149 bits (320), Expect = 5e-035
Identities = 56/77 (72%), Positives = 68/77 (88%)
Frame = -3 / -3
Query: 485 AYEAARDAHAVCILAEWDEFRTLDYKRMFDAMHKPAFIFDGRNVVDXAKLREIGFVVYAI 306
AYEA +DAHAVC+L EWDEF++LDY+++FD M KPAFIFDGRN+++ KLREIGF+VY+I
Sbjct: 465 AYEATKDAHAVCVLTEWDEFKSLDYQKIFDNMQKPAFIFDGRNIMNVNKLREIGFIVYSI 286
Query: 305 GKPLDDWLKDMPAVA*S 255
GKPLD WLKDMPA *S
Sbjct: 285 GKPLDPWLKDMPAFV*S 235
>gb|AV541943.1|AV541943 AV541943 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ174c02F 3', mRNA sequence
Length = 599
Score = 149 bits (320), Expect = 5e-035
Identities = 56/77 (72%), Positives = 68/77 (88%)
Frame = -3 / -3
Query: 485 AYEAARDAHAVCILAEWDEFRTLDYKRMFDAMHKPAFIFDGRNVVDXAKLREIGFVVYAI 306
AYEA +DAHAVC+L EWDEF++LDY+++FD M KPAFIFDGRN+++ KLREIGF+VY+I
Sbjct: 465 AYEATKDAHAVCVLTEWDEFKSLDYQKIFDNMQKPAFIFDGRNIMNVNKLREIGFIVYSI 286
Query: 305 GKPLDDWLKDMPAVA*S 255
GKPLD WLKDMPA *S
Sbjct: 285 GKPLDPWLKDMPAFV*S 235
>gb|AV542896.1|AV542896 AV542896 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ191g10F 3', mRNA sequence
Length = 527
Score = 149 bits (320), Expect = 5e-035
Identities = 56/77 (72%), Positives = 68/77 (88%)
Frame = -3 / -2
Query: 485 AYEAARDAHAVCILAEWDEFRTLDYKRMFDAMHKPAFIFDGRNVVDXAKLREIGFVVYAI 306
AYEA +DAHAVC+L EWDEF++LDY+++FD M KPAFIFDGRN+++ KLREIGF+VY+I
Sbjct: 472 AYEATKDAHAVCVLTEWDEFKSLDYQKIFDNMQKPAFIFDGRNIMNVNKLREIGFIVYSI 293
Query: 305 GKPLDDWLKDMPAVA*S 255
GKPLD WLKDMPA *S
Sbjct: 292 GKPLDPWLKDMPAFV*S 242
>gb|AV549412.1|AV549412 AV549412 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ07d01R 5', mRNA sequence
Length = 497
Score = 149 bits (320), Expect = 5e-035
Identities = 56/77 (72%), Positives = 68/77 (88%)
Frame = -3 / +3
Query: 485 AYEAARDAHAVCILAEWDEFRTLDYKRMFDAMHKPAFIFDGRNVVDXAKLREIGFVVYAI 306
AYEA +DAHAVC+L EWDEF++LDY+++FD M KPAFIFDGRN+++ KLREIGF+VY+I
Sbjct: 201 AYEATKDAHAVCVLTEWDEFKSLDYQKIFDNMQKPAFIFDGRNIMNVNKLREIGFIVYSI 380
Query: 305 GKPLDDWLKDMPAVA*S 255
GKPLD WLKDMPA *S
Sbjct: 381 GKPLDPWLKDMPAFV*S 431
>gb|AV555612.1|AV555612 AV555612 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ020d09F 3', mRNA sequence
Length = 530
Score = 149 bits (320), Expect = 5e-035
Identities = 56/77 (72%), Positives = 68/77 (88%)
Frame = -3 / -3
Query: 485 AYEAARDAHAVCILAEWDEFRTLDYKRMFDAMHKPAFIFDGRNVVDXAKLREIGFVVYAI 306
AYEA +DAHAVC+L EWDEF++LDY+++FD M KPAFIFDGRN+++ KLREIGF+VY+I
Sbjct: 465 AYEATKDAHAVCVLTEWDEFKSLDYQKIFDNMQKPAFIFDGRNIMNVNKLREIGFIVYSI 286
Query: 305 GKPLDDWLKDMPAVA*S 255
GKPLD WLKDMPA *S
Sbjct: 285 GKPLDPWLKDMPAFV*S 235
>gb|AV555633.1|AV555633 AV555633 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ020h08F 3', mRNA sequence
Length = 508
Score = 149 bits (320), Expect = 5e-035
Identities = 56/77 (72%), Positives = 68/77 (88%)
Frame = -3 / -2
Query: 485 AYEAARDAHAVCILAEWDEFRTLDYKRMFDAMHKPAFIFDGRNVVDXAKLREIGFVVYAI 306
AYEA +DAHAVC+L EWDEF++LDY+++FD M KPAFIFDGRN+++ KLREIGF+VY+I
Sbjct: 465 AYEATKDAHAVCVLTEWDEFKSLDYQKIFDNMQKPAFIFDGRNIMNVNKLREIGFIVYSI 286
Query: 305 GKPLDDWLKDMPAVA*S 255
GKPLD WLKDMPA *S
Sbjct: 285 GKPLDPWLKDMPAFV*S 235
>gb|AV561460.1|AV561460 AV561460 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ151h12F 3', mRNA sequence
Length = 564
Score = 149 bits (320), Expect = 5e-035
Identities = 56/77 (72%), Positives = 68/77 (88%)
Frame = -3 / -3
Query: 485 AYEAARDAHAVCILAEWDEFRTLDYKRMFDAMHKPAFIFDGRNVVDXAKLREIGFVVYAI 306
AYEA +DAHAVC+L EWDEF++LDY+++FD M KPAFIFDGRN+++ KLREIGF+VY+I
Sbjct: 385 AYEATKDAHAVCVLTEWDEFKSLDYQKIFDNMQKPAFIFDGRNIMNVNKLREIGFIVYSI 206
Query: 305 GKPLDDWLKDMPAVA*S 255
GKPLD WLKDMPA *S
Sbjct: 205 GKPLDPWLKDMPAFV*S 155
>gb|AV566156.1|AV566156 AV566156 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ238a01F 3', mRNA sequence
Length = 525
Score = 149 bits (320), Expect = 5e-035
Identities = 56/77 (72%), Positives = 68/77 (88%)
Frame = -3 / -3
Query: 485 AYEAARDAHAVCILAEWDEFRTLDYKRMFDAMHKPAFIFDGRNVVDXAKLREIGFVVYAI 306
AYEA +DAHAVC+L EWDEF++LDY+++FD M KPAFIFDGRN+++ KLREIGF+VY+I
Sbjct: 385 AYEATKDAHAVCVLTEWDEFKSLDYQKIFDNMQKPAFIFDGRNIMNVNKLREIGFIVYSI 206
Query: 305 GKPLDDWLKDMPAVA*S 255
GKPLD WLKDMPA *S
Sbjct: 205 GKPLDPWLKDMPAFV*S 155
>gb|AV567064.1|AV567064 AV567064 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQL06a02F 3', mRNA sequence
Length = 538
Score = 149 bits (320), Expect = 5e-035
Identities = 56/77 (72%), Positives = 68/77 (88%)
Frame = -3 / -2
Query: 485 AYEAARDAHAVCILAEWDEFRTLDYKRMFDAMHKPAFIFDGRNVVDXAKLREIGFVVYAI 306
AYEA +DAHAVC+L EWDEF++LDY+++FD M KPAFIFDGRN+++ KLREIGF+VY+I
Sbjct: 465 AYEATKDAHAVCVLTEWDEFKSLDYQKIFDNMQKPAFIFDGRNIMNVNKLREIGFIVYSI 286
Query: 305 GKPLDDWLKDMPAVA*S 255
GKPLD WLKDMPA *S
Sbjct: 285 GKPLDPWLKDMPAFV*S 235
>dbj|AB009054.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUL8
Length = 83450
Score = 149 bits (320), Expect = 5e-035
Identities = 56/77 (72%), Positives = 68/77 (88%)
Frame = -3 / +1
Query: 485 AYEAARDAHAVCILAEWDEFRTLDYKRMFDAMHKPAFIFDGRNVVDXAKLREIGFVVYAI 306
AYEA +DAHAVC+L EWDEF++LDY+++FD M KPAFIFDGRN+++ KLREIGF+VY+I
Sbjct: 94 AYEATKDAHAVCVLTEWDEFKSLDYQKIFDNMQKPAFIFDGRNIMNVNKLREIGFIVYSI 273
Query: 305 GKPLDDWLKDMPAVA*S 255
GKPLD WLKDMPA *S
Sbjct: 274 GKPLDPWLKDMPAFV*S 324
>ref|NM_123294.2| Arabidopsis thaliana UDP-glucose 6-dehydrogenase AT5G39320 mRNA,
complete cds
Length = 1763
Score = 149 bits (320), Expect = 5e-035
Identities = 56/77 (72%), Positives = 68/77 (88%)
Frame = -3 / +2
Query: 485 AYEAARDAHAVCILAEWDEFRTLDYKRMFDAMHKPAFIFDGRNVVDXAKLREIGFVVYAI 306
AYEA +DAHAVC+L EWDEF++LDY+++FD M KPAFIFDGRN+++ KLREIGF+VY+I
Sbjct: 1289 AYEATKDAHAVCVLTEWDEFKSLDYQKIFDNMQKPAFIFDGRNIMNVNKLREIGFIVYSI 1468
Query: 305 GKPLDDWLKDMPAVA*S 255
GKPLD WLKDMPA *S
Sbjct: 1469 GKPLDPWLKDMPAFV*S 1519
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 149 bits (320), Expect = 5e-035
Identities = 56/77 (72%), Positives = 68/77 (88%)
Frame = -3 / +3
Query: 485 AYEAARDAHAVCILAEWDEFRTLDYKRMFDAMHKPAFIFDGRNVVDXAKLREIGFVVYAI 306
AYEA +DAHAVC+L EWDEF++LDY+++FD M KPAFIFDGRN+++ KLREIGF+VY+I
Sbjct: 15761697 AYEATKDAHAVCVLTEWDEFKSLDYQKIFDNMQKPAFIFDGRNIMNVNKLREIGFIVYSI 15761876
Query: 305 GKPLDDWLKDMPAVA*S 255
GKPLD WLKDMPA *S
Sbjct: 15761877 GKPLDPWLKDMPAFV*S 15761927
Score = 147 bits (316), Expect = 2e-034
Identities = 55/77 (71%), Positives = 67/77 (87%)
Frame = -3 / -1
Query: 485 AYEAARDAHAVCILAEWDEFRTLDYKRMFDAMHKPAFIFDGRNVVDXAKLREIGFVVYAI 306
AY A +DAH +CIL EWDEF+ LD++R+F+ M KPAF+FDGRNVVD KLREIGF+VY+I
Sbjct: 5028102 AYTATKDAHGICILTEWDEFKKLDFQRIFENMQKPAFVFDGRNVVDADKLREIGFIVYSI 5027923
Query: 305 GKPLDDWLKDMPAVA*S 255
GKPLD WLKDMPA+A*+
Sbjct: 5027922 GKPLDQWLKDMPALA*T 5027872
>gb|AV817872.1|AV817872 AV817872 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-95-P04 3',
mRNA sequence
Length = 403
Score = 149 bits (320), Expect = 5e-035
Identities = 56/77 (72%), Positives = 68/77 (88%)
Frame = -3 / -2
Query: 485 AYEAARDAHAVCILAEWDEFRTLDYKRMFDAMHKPAFIFDGRNVVDXAKLREIGFVVYAI 306
AYEA +DAHAVC+L EWDEF++LDY+++FD M KPAFIFDGRN+++ KLREIGF+VY+I
Sbjct: 369 AYEATKDAHAVCVLTEWDEFKSLDYQKIFDNMQKPAFIFDGRNIMNVNKLREIGFIVYSI 190
Query: 305 GKPLDDWLKDMPAVA*S 255
GKPLD WLKDMPA *S
Sbjct: 189 GKPLDPWLKDMPAFV*S 139
>gb|AV547150.1|AV547150 AV547150 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZL26b02F 3', mRNA sequence
Length = 444
Score = 149 bits (320), Expect = 5e-035
Identities = 56/77 (72%), Positives = 68/77 (88%)
Frame = -3 / -1
Query: 485 AYEAARDAHAVCILAEWDEFRTLDYKRMFDAMHKPAFIFDGRNVVDXAKLREIGFVVYAI 306
AYEA +DAHAVC+L EWDEF++LDY+++FD M KPAFIFDGRN+++ KLREIGF+VY+I
Sbjct: 399 AYEATKDAHAVCVLTEWDEFKSLDYQKIFDNMQKPAFIFDGRNIMNVNKLREIGFIVYSI 220
Query: 305 GKPLDDWLKDMPAVA*S 255
GKPLD WLKDMPA *S
Sbjct: 219 GKPLDPWLKDMPAFV*S 169
>gb|BP581447.1|BP581447 BP581447 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-31-P13 3',
mRNA sequence
Length = 470
Score = 149 bits (320), Expect = 5e-035
Identities = 56/77 (72%), Positives = 68/77 (88%)
Frame = -3 / -3
Query: 485 AYEAARDAHAVCILAEWDEFRTLDYKRMFDAMHKPAFIFDGRNVVDXAKLREIGFVVYAI 306
AYEA +DAHAVC+L EWDEF++LDY+++FD M KPAFIFDGRN+++ KLREIGF+VY+I
Sbjct: 465 AYEATKDAHAVCVLTEWDEFKSLDYQKIFDNMQKPAFIFDGRNIMNVNKLREIGFIVYSI 286
Query: 305 GKPLDDWLKDMPAVA*S 255
GKPLD WLKDMPA *S
Sbjct: 285 GKPLDPWLKDMPAFV*S 235
>gb|BP789849.1|BP789849 BP789849 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-40-N08 3',
mRNA sequence
Length = 405
Score = 149 bits (320), Expect = 5e-035
Identities = 56/77 (72%), Positives = 68/77 (88%)
Frame = -3 / -2
Query: 485 AYEAARDAHAVCILAEWDEFRTLDYKRMFDAMHKPAFIFDGRNVVDXAKLREIGFVVYAI 306
AYEA +DAHAVC+L EWDEF++LDY+++FD M KPAFIFDGRN+++ KLREIGF+VY+I
Sbjct: 401 AYEATKDAHAVCVLTEWDEFKSLDYQKIFDNMQKPAFIFDGRNIMNVNKLREIGFIVYSI 222
Query: 305 GKPLDDWLKDMPAVA*S 255
GKPLD WLKDMPA *S
Sbjct: 221 GKPLDPWLKDMPAFV*S 171
>gb|AV791275.1|AV791275 AV791275 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-09-M15 3',
mRNA sequence
Length = 462
Score = 148 bits (318), Expect(2) = 1e-034
Identities = 53/76 (69%), Positives = 68/76 (89%)
Frame = -3 / -1
Query: 485 AYEAARDAHAVCILAEWDEFRTLDYKRMFDAMHKPAFIFDGRNVVDXAKLREIGFVVYAI 306
AYEA +DAH +CI+ EWDEF+ LD++++FD M KPAF+FDGRN+++ KLREIGF+VY+I
Sbjct: 462 AYEATKDAHGICIMTEWDEFKNLDFQKIFDNMQKPAFVFDGRNIMNLQKLREIGFIVYSI 283
Query: 305 GKPLDDWLKDMPAVA* 258
GKPLDDWLKDMPA+A*
Sbjct: 282 GKPLDDWLKDMPALA* 235
Score = 18.9 bits (35), Expect(2) = 1e-034
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -2 / -3
Query: 279 GHASRRVIHRSICRAHSLTC 220
G + R VI +IC SL C
Sbjct: 178 GLSLRLVIFLTICLLCSLVC 119
>gb|AI998845.1|AI998845 701547096 A. thaliana, Columbia Col-0, rosette-2 Arabidopsis
thaliana cDNA clone 701547096, mRNA sequence
Length = 548
Score = 147 bits (316), Expect = 2e-034
Identities = 55/77 (71%), Positives = 67/77 (87%)
Frame = -3 / -1
Query: 485 AYEAARDAHAVCILAEWDEFRTLDYKRMFDAMHKPAFIFDGRNVVDXAKLREIGFVVYAI 306
AY A +DAH +CIL EWDEF+ LD++R+F+ M KPAF+FDGRNVVD KLREIGF+VY+I
Sbjct: 461 AYTATKDAHGICILTEWDEFKKLDFQRIFENMQKPAFVFDGRNVVDADKLREIGFIVYSI 282
Query: 305 GKPLDDWLKDMPAVA*S 255
GKPLD WLKDMPA+A*+
Sbjct: 281 GKPLDQWLKDMPALA*T 231
>gb|AV535151.1|AV535151 AV535151 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB091g01F 3', mRNA sequence
Length = 515
Score = 147 bits (316), Expect = 2e-034
Identities = 55/77 (71%), Positives = 67/77 (87%)
Frame = -3 / -2
Query: 485 AYEAARDAHAVCILAEWDEFRTLDYKRMFDAMHKPAFIFDGRNVVDXAKLREIGFVVYAI 306
AY A +DAH +CIL EWDEF+ LD++R+F+ M KPAF+FDGRNVVD KLREIGF+VY+I
Sbjct: 460 AYTATKDAHGICILTEWDEFKKLDFQRIFENMQKPAFVFDGRNVVDADKLREIGFIVYSI 281
Query: 305 GKPLDDWLKDMPAVA*S 255
GKPLD WLKDMPA+A*+
Sbjct: 280 GKPLDQWLKDMPALA*T 230
>gb|AV543899.1|AV543899 AV543899 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ27c11F 3', mRNA sequence
Length = 495
Score = 147 bits (316), Expect = 2e-034
Identities = 55/77 (71%), Positives = 67/77 (87%)
Frame = -3 / -1
Query: 485 AYEAARDAHAVCILAEWDEFRTLDYKRMFDAMHKPAFIFDGRNVVDXAKLREIGFVVYAI 306
AY A +DAH +CIL EWDEF+ LD++R+F+ M KPAF+FDGRNVVD KLREIGF+VY+I
Sbjct: 231 AYTATKDAHGICILTEWDEFKKLDFQRIFENMQKPAFVFDGRNVVDADKLREIGFIVYSI 52
Query: 305 GKPLDDWLKDMPAVA*S 255
GKPLD WLKDMPA+A*+
Sbjct: 51 GKPLDQWLKDMPALA*T 1
>gb|AV545316.1|AV545316 AV545316 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ79e02F 3', mRNA sequence
Length = 654
Score = 147 bits (316), Expect = 2e-034
Identities = 55/77 (71%), Positives = 67/77 (87%)
Frame = -3 / -2
Query: 485 AYEAARDAHAVCILAEWDEFRTLDYKRMFDAMHKPAFIFDGRNVVDXAKLREIGFVVYAI 306
AY A +DAH +CIL EWDEF+ LD++R+F+ M KPAF+FDGRNVVD KLREIGF+VY+I
Sbjct: 434 AYTATKDAHGICILTEWDEFKKLDFQRIFENMQKPAFVFDGRNVVDADKLREIGFIVYSI 255
Query: 305 GKPLDDWLKDMPAVA*S 255
GKPLD WLKDMPA+A*+
Sbjct: 254 GKPLDQWLKDMPALA*T 204
>gb|AV549693.1|AV549693 AV549693 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ101b05R 5', mRNA sequence
Length = 517
Score = 147 bits (316), Expect = 2e-034
Identities = 55/77 (71%), Positives = 67/77 (87%)
Frame = -3 / +2
Query: 485 AYEAARDAHAVCILAEWDEFRTLDYKRMFDAMHKPAFIFDGRNVVDXAKLREIGFVVYAI 306
AY A +DAH +CIL EWDEF+ LD++R+F+ M KPAF+FDGRNVVD KLREIGF+VY+I
Sbjct: 65 AYTATKDAHGICILTEWDEFKKLDFQRIFENMQKPAFVFDGRNVVDADKLREIGFIVYSI 244
Query: 305 GKPLDDWLKDMPAVA*S 255
GKPLD WLKDMPA+A*+
Sbjct: 245 GKPLDQWLKDMPALA*T 295
>gb|AV555725.1|AV555725 AV555725 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ023g10F 3', mRNA sequence
Length = 496
Score = 147 bits (316), Expect = 2e-034
Identities = 55/77 (71%), Positives = 67/77 (87%)
Frame = -3 / -2
Query: 485 AYEAARDAHAVCILAEWDEFRTLDYKRMFDAMHKPAFIFDGRNVVDXAKLREIGFVVYAI 306
AY A +DAH +CIL EWDEF+ LD++R+F+ M KPAF+FDGRNVVD KLREIGF+VY+I
Sbjct: 453 AYTATKDAHGICILTEWDEFKKLDFQRIFENMQKPAFVFDGRNVVDADKLREIGFIVYSI 274
Query: 305 GKPLDDWLKDMPAVA*S 255
GKPLD WLKDMPA+A*+
Sbjct: 273 GKPLDQWLKDMPALA*T 223
>gb|AY056200.1| Arabidopsis thaliana putative UDP-glucose dehydrogenase (At5g15490)
mRNA, complete cds
Length = 1793
Score = 147 bits (316), Expect = 2e-034
Identities = 55/77 (71%), Positives = 67/77 (87%)
Frame = -3 / +1
Query: 485 AYEAARDAHAVCILAEWDEFRTLDYKRMFDAMHKPAFIFDGRNVVDXAKLREIGFVVYAI 306
AY A +DAH +CIL EWDEF+ LD++R+F+ M KPAF+FDGRNVVD KLREIGF+VY+I
Sbjct: 1318 AYTATKDAHGICILTEWDEFKKLDFQRIFENMQKPAFVFDGRNVVDADKLREIGFIVYSI 1497
Query: 305 GKPLDDWLKDMPAVA*S 255
GKPLD WLKDMPA+A*+
Sbjct: 1498 GKPLDQWLKDMPALA*T 1548
>gb|BT006380.1| Arabidopsis thaliana At5g39320 gene, complete cds
Length = 1440
Score = 147 bits (316), Expect = 2e-034
Identities = 54/73 (73%), Positives = 66/73 (90%)
Frame = -3 / +1
Query: 485 AYEAARDAHAVCILAEWDEFRTLDYKRMFDAMHKPAFIFDGRNVVDXAKLREIGFVVYAI 306
AYEA +DAHAVC+L EWDEF++LDY+++FD M KPAFIFDGRN+++ KLREIGF+VY+I
Sbjct: 1213 AYEATKDAHAVCVLTEWDEFKSLDYQKIFDNMQKPAFIFDGRNIMNVNKLREIGFIVYSI 1392
Query: 305 GKPLDDWLKDMPA 267
GKPLD WLKDMPA
Sbjct: 1393 GKPLDPWLKDMPA 1431
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 147 bits (316), Expect = 2e-034
Identities = 55/77 (71%), Positives = 67/77 (87%)
Frame = -3 / -3
Query: 485 AYEAARDAHAVCILAEWDEFRTLDYKRMFDAMHKPAFIFDGRNVVDXAKLREIGFVVYAI 306
AY A +DAH +CIL EWDEF+ LD++R+F+ M KPAF+FDGRNVVD KLREIGF+VY+I
Sbjct: 4811075 AYTATKDAHGICILTEWDEFKKLDFQRIFENMQKPAFVFDGRNVVDADKLREIGFIVYSI 4810896
Query: 305 GKPLDDWLKDMPAVA*S 255
GKPLD WLKDMPA+A*+
Sbjct: 4810895 GKPLDQWLKDMPALA*T 4810845
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 765,206,373
Number of Sequences: 1013581
Number of extensions: 9339644
Number of successful extensions: 171207
Number of sequences better than 1.0e-020: 139
length of database: 302,980,290
effective HSP length: 54
effective length of database: 248,246,916
effective search space used: 26562420012
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)