TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3696743.2.1
(977 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|NM_123748.2| Arabidopsis thaliana ZLL (ZWILLE) AT5G4381... 397 e-121
emb|AJ223508.1|ART223508 Arabidopsis thaliana mRNA for Zwil... 397 e-121
emb|AX505737.1| Sequence 432 from Patent WO0216655 397 e-121
ref|NM_179453.1| Arabidopsis thaliana AGO1 (ARGONAUTE 1) AT... 420 e-117
ref|NM_103737.2| Arabidopsis thaliana AGO1 (ARGONAUTE 1) AT... 420 e-117
gb|U91995.1|ATU91995 Arabidopsis thaliana Argonaute protein... 420 e-117
gb|BT000941.1| Arabidopsis thaliana clone C105223 putative ... 420 e-117
gb|AY080690.1| Arabidopsis thaliana At1g48410 mRNA sequence 420 e-117
gb|CK119358.1|CK119358 212p13.p1 AtM1 Arabidopsis thaliana ... 397 e-110
emb|BX815116.1|CNS0AAU5 Arabidopsis thaliana Full-length cD... 259 e-107
dbj|AB026651.1| Arabidopsis thaliana genomic DNA, chromosom... 105 e-100
gb|AF154272.1|AF154272 Arabidopsis thaliana PINHEAD (PINHEA... 105 e-100
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 188 6e-098
gb|AC007932.3|F11A17 Arabidopsis thaliana chromosome 1 BAC ... 100 7e-098
gb|AC020889.3|AC020889 Genomic sequence for Arabidopsis tha... 100 7e-098
ref|NM_179779.1| Arabidopsis thaliana unknown protein AT2G2... 344 1e-097
emb|BX821460.1|CNS0A8DH Arabidopsis thaliana Full-length cD... 343 2e-097
gb|CB260762.1|CB260762 67-E009520-012-003-F21-T7R MPIZ-ADIS... 350 4e-095
emb|BX818680.1|CNS0ACI7 Arabidopsis thaliana Full-length cD... 257 8e-086
gb|AV523806.1|AV523806 AV523806 Arabidopsis thaliana aboveg... 306 6e-082
gb|AC005824.3| Arabidopsis thaliana chromosome 2 clone F15K... 113 5e-081
gb|AC006929.4| Arabidopsis thaliana chromosome 2 clone T1E2... 113 5e-081
gb|CA781259.1|CA781259 014A08AF Infected Arabidopsis Leaf A... 290 3e-080
gb|AV441187.1|AV441187 AV441187 Arabidopsis thaliana above-... 294 8e-080
gb|BE523184.1|BE523184 M35A4STM Arabidopsis developing seed... 296 9e-079
gb|AV563657.1|AV563657 AV563657 Arabidopsis thaliana green ... 278 5e-075
gb|AV545970.1|AV545970 AV545970 Arabidopsis thaliana roots ... 263 2e-070
gb|CD534067.1|CD534067 35F4 Arabidopsis Leaf Senescence Lib... 237 3e-064
gb|AC073178.9|AC073178 Arabidopsis thaliana chromosome 1 BA... 188 4e-062
ref|NM_105611.3| Arabidopsis thaliana AGO7 (ARGONAUTE7) AT1... 188 5e-062
gb|AY394564.1| Arabidopsis thaliana ZIPPY mRNA, complete cds 188 5e-062
gb|CK121100.1|CK121100 204j21.p1 AtM1 Arabidopsis thaliana ... 236 8e-061
gb|AV556836.1|AV556836 AV556836 Arabidopsis thaliana green ... 188 1e-058
gb|BX838222.1|BX838222 BX838222 Arabidopsis thaliana Siliqu... 207 9e-057
gb|AY035081.1| Arabidopsis thaliana putative Argonaute (AGO... 141 6e-052
ref|NM_128262.2| Arabidopsis thaliana AGO4 (ARGONAUTE 4) AT... 141 6e-052
gb|AY051033.1| Arabidopsis thaliana putative argonaute AGO1... 141 6e-052
emb|AX505699.1| Sequence 394 from Patent WO0216655 141 6e-052
emb|BX820023.1|CNS0A9EM Arabidopsis thaliana Full-length cD... 141 6e-052
gb|AV548172.1|AV548172 AV548172 Arabidopsis thaliana roots ... 197 1e-050
gb|AV529891.1|AV529891 AV529891 Arabidopsis thaliana aboveg... 185 3e-047
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 188 3e-046
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 144 1e-045
gb|AC007654.2|AC007654 Genomic sequence for Arabidopsis tha... 144 1e-045
ref|NM_102866.1| Arabidopsis thaliana AGO2 AT1G31280 (AGO2)... 144 1e-045
dbj|AK118463.1| Arabidopsis thaliana At1g31280 mRNA for unk... 144 1e-045
gb|BT005914.1| Arabidopsis thaliana At1g31280 gene, complet... 144 1e-045
gb|AV548086.1|AV548086 AV548086 Arabidopsis thaliana roots ... 176 2e-044
gb|AY600524.1| Arabidopsis thaliana hypothetical protein (A... 171 3e-043
ref|NM_122111.2| Arabidopsis thaliana unknown protein AT5G2... 135 4e-043
ref|NM_128854.2| Arabidopsis thaliana unknown protein AT2G3... 124 8e-043
gb|AV534003.1|AV534003 AV534003 Arabidopsis thaliana flower... 166 1e-041
gb|AV532952.1|AV532952 AV532952 Arabidopsis thaliana flower... 166 1e-041
gb|AV560716.1|AV560716 AV560716 Arabidopsis thaliana green ... 166 1e-041
emb|AJ522260.1|ATH522260 Arabidopsis thaliana T-DNA flankin... 85 7e-040
gb|BP795190.1|BP795190 BP795190 RAFL7 Arabidopsis thaliana ... 157 6e-039
gb|B25866.1|B25866 F28J22TRB IGF Arabidopsis thaliana genom... 83 3e-038
ref|NM_102867.1| Arabidopsis thaliana unknown protein AT1G3... 124 5e-038
gb|AI993691.1|AI993691 701497176 A. thaliana, Ohio State cl... 157 4e-037
gb|BP601377.1|BP601377 BP601377 RAFL16 Arabidopsis thaliana... 116 9e-037
gb|BP618364.1|BP618364 BP618364 RAFL16 Arabidopsis thaliana... 132 2e-036
gb|BU635669.1|BU635669 028G09 Infected Arabidopsis Leaf Ara... 135 6e-036
gb|BP611041.1|BP611041 BP611041 RAFL16 Arabidopsis thaliana... 112 1e-035
gb|AV523440.1|AV523440 AV523440 Arabidopsis thaliana aboveg... 141 5e-035
gb|BP617474.1|BP617474 BP617474 RAFL16 Arabidopsis thaliana... 116 5e-035
gb|AV524024.1|AV524024 AV524024 Arabidopsis thaliana aboveg... 140 7e-035
gb|B96649.1|B96649 T30P20TR TAMU Arabidopsis thaliana genom... 100 2e-034
gb|BP619936.1|BP619936 BP619936 RAFL16 Arabidopsis thaliana... 142 2e-034
ref|NM_122122.2| Arabidopsis thaliana unknown protein AT5G2... 140 2e-034
dbj|AK221864.1| Arabidopsis thaliana mRNA for zwille/pinhea... 140 2e-034
dbj|AK118258.1| Arabidopsis thaliana At5g21150 mRNA for put... 140 3e-034
gb|BX836647.1|BX836647 BX836647 Arabidopsis thaliana Flower... 95 5e-034
gb|BH904361.1|BH904361 SALK_104357.53.75.x Arabidopsis thal... 83 9e-034
emb|AJ544236.1|ATH544236 Arabidopsis thaliana mRNA for ARGO... 138 1e-033
gb|AV792863.1|AV792863 AV792863 RAFL7 Arabidopsis thaliana ... 113 6e-031
gb|AV813765.1|AV813765 AV813765 RAFL9 Arabidopsis thaliana ... 95 3e-029
gb|BH617562.1|BH617562 SALK_037270 Arabidopsis thaliana TDN... 83 2e-028
gb|BP640077.1|BP640077 BP640077 RAFL19 Arabidopsis thaliana... 123 6e-028
gb|BP575189.1|BP575189 BP575189 RAFL14 Arabidopsis thaliana... 113 7e-026
gb|BP600427.1|BP600427 BP600427 RAFL16 Arabidopsis thaliana... 90 7e-026
gb|BP657306.1|BP657306 BP657306 RAFL19 Arabidopsis thaliana... 83 1e-025
gb|AC005623.3| Arabidopsis thaliana chromosome 2 clone T20P... 53 6e-025
emb|BX530820.1| Arabidopsis thaliana T-DNA flanking sequenc... 84 7e-025
gb|BP611537.1|BP611537 BP611537 RAFL16 Arabidopsis thaliana... 74 9e-025
gb|AC140977.1| Arabidopsis thaliana chromosome 5 BAC F13M11... 55 1e-024
gb|Z34562.1|Z34562 ATTS3322 Versailles-VB Arabidopsis thali... 79 4e-024
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 113 7e-024
gb|BP605782.1|BP605782 BP605782 RAFL16 Arabidopsis thaliana... 57 8e-024
gb|AV523915.1|AV523915 AV523915 Arabidopsis thaliana aboveg... 102 2e-023
gb|BP610427.1|BP610427 BP610427 RAFL16 Arabidopsis thaliana... 75 3e-023
gb|BP647257.1|BP647257 BP647257 RAFL19 Arabidopsis thaliana... 82 5e-023
gb|BP785021.1|BP785021 BP785021 RAFL7 Arabidopsis thaliana ... 105 2e-022
gb|BP606094.1|BP606094 BP606094 RAFL16 Arabidopsis thaliana... 101 2e-022
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 105 2e-021
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 105 2e-021
>ref|NM_123748.2| Arabidopsis thaliana ZLL (ZWILLE) AT5G43810 (ZLL) mRNA, complete cds
Length = 3330
Score = 397 bits (861), Expect(3) = e-121
Identities = 156/175 (89%), Positives = 167/175 (95%)
Frame = -2 / +3
Query: 937 NLLISFWRATGQKPKRIIFYRDGVSEGQFYQVLLYELDAIRKACASLESDYQPPVTFVVV 758
+LLISF +ATGQKP RIIFYRDGVSEGQFYQVLLYELDAIRKACASLE +YQPPVTF+VV
Sbjct: 2448 DLLISFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVV 2627
Query: 757 QKRHHTRLFVNNHNDQRAADRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHY 578
QKRHHTRLF NNH D+ + DRSGNILPGTVVD+KICHPTEFDFYLCSHAGIQGTSRPAHY
Sbjct: 2628 QKRHHTRLFANNHRDKNSTDRSGNILPGTVVDTKICHPTEFDFYLCSHAGIQGTSRPAHY 2807
Query: 577 HVLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPD 413
HVLWDEN FTADG+Q+LTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFY+EP+
Sbjct: 2808 HVLWDENNFTADGIQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYLEPE 2972
Score = 118 bits (253), Expect = 2e-025
Identities = 56/149 (37%), Positives = 92/149 (61%)
Frame = +2 / -2
Query: 494 APGIRVTQVVGESLQPISRKFVLIPQNMIMGRTACSLNASMAAQVEIKLGWMANL*VHHS 673
AP I +T++V + L I + VL+P+NM+M R ACSLN MA +VE++ WM V++S
Sbjct: 2891 APRIGITEIVSQRLNTICCEIVLVPKNMVMCRPACSLNTRMATKVEVEFSWMTYFSVNYS 2712
Query: 674 ARQYVATSIGSTLIIVIINKQPGVMTLLDHDKSNWRLVIRLQ*CTGLSNGIKFVQQNLVE 853
++ S+ + + VII+KQ V+TLL + + + L+IR + CT LSN I+ ++ NL+E
Sbjct: 2711 TW*DISASVSTVFVSVIISKQTSVVTLLYNYECHRWLIIRFKRCTSLSNCIQLIE*NLIE 2532
Query: 854 LSLTDTIPVEYDPLGFLSSRPPERNEKVP 940
L +I ++ + FL + ++KVP
Sbjct: 2531 LPFAYSITIKDNSKRFLPCCFSK*DKKVP 2445
Score = 105 bits (223), Expect(5) = 5e-047
Identities = 55/93 (59%), Positives = 62/93 (66%)
Frame = +3 / -3
Query: 408 LVSGSM*NXXXXXXXXXXXXGGTIDTERVHLAYV*HKLLVRVCNPSAVNLFSSHRT**WA 587
++SGS * GGTI+T+RVH A V* +LLVR PSAV LFSS RT * A
Sbjct: 2977 IISGSR*KRARNAAR*A*YAGGTIETDRVHRA*V*QRLLVRD*IPSAVKLFSSQRTW*CA 2798
Query: 588 GRLVP*MPAWLHR*KSNSVGWQIFESTTVPGSM 686
G LVP*+PAWL R*KSNSVG I STTVPG +
Sbjct: 2797 GLLVP*IPAWLQR*KSNSVG*HILVSTTVPGKI 2699
Score = 82.2 bits (173), Expect(2) = 2e-021
Identities = 36/92 (39%), Positives = 57/92 (61%)
Frame = -1 / +2
Query: 695 KWQHTAGHCGGLKDLPSNRV*FLPVQPCWHSGNKPSCPLSCSVG*EQIYG*WVANSHQQL 516
K ++ +C ++ SN + LP+ PC +SGNK +C L CS+G EQ + W + S Q
Sbjct: 2690 KRKYLTRYCS*H*NMSSN*IRLLPL*PCGYSGNKQACTLPCSLGREQFHSRWYSISD*QS 2869
Query: 515 VLHVCQVHTLSINRSSCILCSSGSLPSSVLHG 420
+L++C VH++ + SS +LCSS S+ S+ L G
Sbjct: 2870 LLYLCAVHSVGLYSSSSVLCSSCSISSTFLPG 2965
Score = 82.2 bits (173), Expect(5) = 5e-047
Identities = 40/63 (63%), Positives = 47/63 (74%)
Frame = +3 / -3
Query: 747 *RFWTTTKVTGGW*SDSNDAQAFLMASSSYNRTW*NCPSLTPSL*NMILLGFCPVALQKE 926
*RF TT VTGG * S+DAQAF +AS+S ++T *NCPSLTPS * +I GFCPVA E
Sbjct: 2638 *RFCTTMNVTGG**FGSSDAQAFRIASNS*SKT**NCPSLTPSR*KIIRSGFCPVAFLNE 2459
Query: 927 MRR 935
+RR
Sbjct: 2458 IRR 2450
Score = 49.6 bits (102), Expect(3) = e-121
Identities = 21/36 (58%), Positives = 23/36 (63%)
Frame = -2 / +3
Query: 367 GPPPGARNTRAGAANVAVRPLPALKENVKRVMFYC* 260
G P +V V+PLPALKENVKRVMFYC*
Sbjct: 2988 GSPGKKNTKTTTVGDVGVKPLPALKENVKRVMFYC* 3095
Score = 43.2 bits (88), Expect(2) = 2e-021
Identities = 25/72 (34%), Positives = 36/72 (50%)
Frame = -1 / +2
Query: 935 PSHFFLEGDWTKTQEDHILQGWCQ*GTVLPSSVVRT*CH*KGLCIIGV*LPASSYFCRGP 756
PS+ + + KT +++L W + +L S + C+ KGLCI L A+
Sbjct: 2450 PSYLI*KSNRAKTASNYLLS*WSKRRAILSSFTL*VGCNSKGLCIA*TELSATGDIHSCT 2629
Query: 755 EASSHQVVC**S 720
EAS H VC**S
Sbjct: 2630 EASPHSFVC**S 2665
Score = 32.7 bits (65), Expect(5) = 5e-047
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +3 / -3
Query: 261 *Q*NMTRFTFSLRAGNGLTAT 323
*Q*N+T FTFS +AG G T T
Sbjct: 3094 *Q*NITLFTFSFKAGKGFTPT 3032
Score = 31.8 bits (63), Expect(3) = e-121
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -1 / +3
Query: 977 DPQRGTVSGGMIRE 936
DP RGTVSGGMIR+
Sbjct: 2409 DPVRGTVSGGMIRD 2450
Score = 22.6 bits (43), Expect(5) = 5e-047
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1 / -1
Query: 721 DY*QTTWCDDAS 756
DY*QT C DAS
Sbjct: 2664 DY*QTNECGDAS 2629
Score = 22.1 bits (42), Expect(5) = 5e-047
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +1 / -3
Query: 937 SLIMPPETVPLWG 975
SLI+PP TVP G
Sbjct: 2449 SLIIPPLTVPRTG 2411
>emb|AJ223508.1|ART223508 Arabidopsis thaliana mRNA for Zwille protein
Length = 3323
Score = 397 bits (861), Expect(3) = e-121
Identities = 156/175 (89%), Positives = 167/175 (95%)
Frame = -2 / +3
Query: 937 NLLISFWRATGQKPKRIIFYRDGVSEGQFYQVLLYELDAIRKACASLESDYQPPVTFVVV 758
+LLISF +ATGQKP RIIFYRDGVSEGQFYQVLLYELDAIRKACASLE +YQPPVTF+VV
Sbjct: 2448 DLLISFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVV 2627
Query: 757 QKRHHTRLFVNNHNDQRAADRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHY 578
QKRHHTRLF NNH D+ + DRSGNILPGTVVD+KICHPTEFDFYLCSHAGIQGTSRPAHY
Sbjct: 2628 QKRHHTRLFANNHRDKNSTDRSGNILPGTVVDTKICHPTEFDFYLCSHAGIQGTSRPAHY 2807
Query: 577 HVLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPD 413
HVLWDEN FTADG+Q+LTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFY+EP+
Sbjct: 2808 HVLWDENNFTADGIQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYLEPE 2972
Score = 118 bits (253), Expect = 2e-025
Identities = 56/149 (37%), Positives = 92/149 (61%)
Frame = +2 / -1
Query: 494 APGIRVTQVVGESLQPISRKFVLIPQNMIMGRTACSLNASMAAQVEIKLGWMANL*VHHS 673
AP I +T++V + L I + VL+P+NM+M R ACSLN MA +VE++ WM V++S
Sbjct: 2891 APRIGITEIVSQRLNTICCEIVLVPKNMVMCRPACSLNTRMATKVEVEFSWMTYFSVNYS 2712
Query: 674 ARQYVATSIGSTLIIVIINKQPGVMTLLDHDKSNWRLVIRLQ*CTGLSNGIKFVQQNLVE 853
++ S+ + + VII+KQ V+TLL + + + L+IR + CT LSN I+ ++ NL+E
Sbjct: 2711 TW*DISASVSTVFVSVIISKQTSVVTLLYNYECHRWLIIRFKRCTSLSNCIQLIE*NLIE 2532
Query: 854 LSLTDTIPVEYDPLGFLSSRPPERNEKVP 940
L +I ++ + FL + ++KVP
Sbjct: 2531 LPFAYSITIKDNSKRFLPCCFSK*DKKVP 2445
Score = 105 bits (223), Expect(5) = 5e-047
Identities = 55/93 (59%), Positives = 62/93 (66%)
Frame = +3 / -2
Query: 408 LVSGSM*NXXXXXXXXXXXXGGTIDTERVHLAYV*HKLLVRVCNPSAVNLFSSHRT**WA 587
++SGS * GGTI+T+RVH A V* +LLVR PSAV LFSS RT * A
Sbjct: 2977 IISGSR*KRARNAAR*A*YAGGTIETDRVHRA*V*QRLLVRD*IPSAVKLFSSQRTW*CA 2798
Query: 588 GRLVP*MPAWLHR*KSNSVGWQIFESTTVPGSM 686
G LVP*+PAWL R*KSNSVG I STTVPG +
Sbjct: 2797 GLLVP*IPAWLQR*KSNSVG*HILVSTTVPGKI 2699
Score = 82.2 bits (173), Expect(2) = 2e-021
Identities = 36/92 (39%), Positives = 57/92 (61%)
Frame = -1 / +2
Query: 695 KWQHTAGHCGGLKDLPSNRV*FLPVQPCWHSGNKPSCPLSCSVG*EQIYG*WVANSHQQL 516
K ++ +C ++ SN + LP+ PC +SGNK +C L CS+G EQ + W + S Q
Sbjct: 2690 KRKYLTRYCS*H*NMSSN*IRLLPL*PCGYSGNKQACTLPCSLGREQFHSRWYSISD*QS 2869
Query: 515 VLHVCQVHTLSINRSSCILCSSGSLPSSVLHG 420
+L++C VH++ + SS +LCSS S+ S+ L G
Sbjct: 2870 LLYLCAVHSVGLYSSSSVLCSSCSISSTFLPG 2965
Score = 82.2 bits (173), Expect(5) = 5e-047
Identities = 40/63 (63%), Positives = 47/63 (74%)
Frame = +3 / -2
Query: 747 *RFWTTTKVTGGW*SDSNDAQAFLMASSSYNRTW*NCPSLTPSL*NMILLGFCPVALQKE 926
*RF TT VTGG * S+DAQAF +AS+S ++T *NCPSLTPS * +I GFCPVA E
Sbjct: 2638 *RFCTTMNVTGG**FGSSDAQAFRIASNS*SKT**NCPSLTPSR*KIIRSGFCPVAFLNE 2459
Query: 927 MRR 935
+RR
Sbjct: 2458 IRR 2450
Score = 49.6 bits (102), Expect(3) = e-121
Identities = 21/36 (58%), Positives = 23/36 (63%)
Frame = -2 / +3
Query: 367 GPPPGARNTRAGAANVAVRPLPALKENVKRVMFYC* 260
G P +V V+PLPALKENVKRVMFYC*
Sbjct: 2988 GSPGKKNTKTTTVGDVGVKPLPALKENVKRVMFYC* 3095
Score = 43.2 bits (88), Expect(2) = 2e-021
Identities = 25/72 (34%), Positives = 36/72 (50%)
Frame = -1 / +2
Query: 935 PSHFFLEGDWTKTQEDHILQGWCQ*GTVLPSSVVRT*CH*KGLCIIGV*LPASSYFCRGP 756
PS+ + + KT +++L W + +L S + C+ KGLCI L A+
Sbjct: 2450 PSYLI*KSNRAKTASNYLLS*WSKRRAILSSFTL*VGCNSKGLCIA*TELSATGDIHSCT 2629
Query: 755 EASSHQVVC**S 720
EAS H VC**S
Sbjct: 2630 EASPHSFVC**S 2665
Score = 32.7 bits (65), Expect(5) = 5e-047
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +3 / -2
Query: 261 *Q*NMTRFTFSLRAGNGLTAT 323
*Q*N+T FTFS +AG G T T
Sbjct: 3094 *Q*NITLFTFSFKAGKGFTPT 3032
Score = 31.8 bits (63), Expect(3) = e-121
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -1 / +3
Query: 977 DPQRGTVSGGMIRE 936
DP RGTVSGGMIR+
Sbjct: 2409 DPVRGTVSGGMIRD 2450
Score = 22.6 bits (43), Expect(5) = 5e-047
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1 / -3
Query: 721 DY*QTTWCDDAS 756
DY*QT C DAS
Sbjct: 2664 DY*QTNECGDAS 2629
Score = 22.1 bits (42), Expect(5) = 5e-047
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +1 / -2
Query: 937 SLIMPPETVPLWG 975
SLI+PP TVP G
Sbjct: 2449 SLIIPPLTVPRTG 2411
>emb|AX505737.1| Sequence 432 from Patent WO0216655
Length = 2967
Score = 397 bits (861), Expect(3) = e-121
Identities = 156/175 (89%), Positives = 167/175 (95%)
Frame = -2 / +1
Query: 937 NLLISFWRATGQKPKRIIFYRDGVSEGQFYQVLLYELDAIRKACASLESDYQPPVTFVVV 758
+LLISF +ATGQKP RIIFYRDGVSEGQFYQVLLYELDAIRKACASLE +YQPPVTF+VV
Sbjct: 2320 DLLISFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVV 2499
Query: 757 QKRHHTRLFVNNHNDQRAADRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHY 578
QKRHHTRLF NNH D+ + DRSGNILPGTVVD+KICHPTEFDFYLCSHAGIQGTSRPAHY
Sbjct: 2500 QKRHHTRLFANNHRDKNSTDRSGNILPGTVVDTKICHPTEFDFYLCSHAGIQGTSRPAHY 2679
Query: 577 HVLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPD 413
HVLWDEN FTADG+Q+LTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFY+EP+
Sbjct: 2680 HVLWDENNFTADGIQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYLEPE 2844
Score = 118 bits (253), Expect = 2e-025
Identities = 56/149 (37%), Positives = 92/149 (61%)
Frame = +2 / -1
Query: 494 APGIRVTQVVGESLQPISRKFVLIPQNMIMGRTACSLNASMAAQVEIKLGWMANL*VHHS 673
AP I +T++V + L I + VL+P+NM+M R ACSLN MA +VE++ WM V++S
Sbjct: 2763 APRIGITEIVSQRLNTICCEIVLVPKNMVMCRPACSLNTRMATKVEVEFSWMTYFSVNYS 2584
Query: 674 ARQYVATSIGSTLIIVIINKQPGVMTLLDHDKSNWRLVIRLQ*CTGLSNGIKFVQQNLVE 853
++ S+ + + VII+KQ V+TLL + + + L+IR + CT LSN I+ ++ NL+E
Sbjct: 2583 TW*DISASVSTVFVSVIISKQTSVVTLLYNYECHRWLIIRFKRCTSLSNCIQLIE*NLIE 2404
Query: 854 LSLTDTIPVEYDPLGFLSSRPPERNEKVP 940
L +I ++ + FL + ++KVP
Sbjct: 2403 LPFAYSITIKDNSKRFLPCCFSK*DKKVP 2317
Score = 105 bits (223), Expect(5) = 5e-047
Identities = 55/93 (59%), Positives = 62/93 (66%)
Frame = +3 / -2
Query: 408 LVSGSM*NXXXXXXXXXXXXGGTIDTERVHLAYV*HKLLVRVCNPSAVNLFSSHRT**WA 587
++SGS * GGTI+T+RVH A V* +LLVR PSAV LFSS RT * A
Sbjct: 2849 IISGSR*KRARNAAR*A*YAGGTIETDRVHRA*V*QRLLVRD*IPSAVKLFSSQRTW*CA 2670
Query: 588 GRLVP*MPAWLHR*KSNSVGWQIFESTTVPGSM 686
G LVP*+PAWL R*KSNSVG I STTVPG +
Sbjct: 2669 GLLVP*IPAWLQR*KSNSVG*HILVSTTVPGKI 2571
Score = 82.2 bits (173), Expect(2) = 2e-021
Identities = 36/92 (39%), Positives = 57/92 (61%)
Frame = -1 / +3
Query: 695 KWQHTAGHCGGLKDLPSNRV*FLPVQPCWHSGNKPSCPLSCSVG*EQIYG*WVANSHQQL 516
K ++ +C ++ SN + LP+ PC +SGNK +C L CS+G EQ + W + S Q
Sbjct: 2562 KRKYLTRYCS*H*NMSSN*IRLLPL*PCGYSGNKQACTLPCSLGREQFHSRWYSISD*QS 2741
Query: 515 VLHVCQVHTLSINRSSCILCSSGSLPSSVLHG 420
+L++C VH++ + SS +LCSS S+ S+ L G
Sbjct: 2742 LLYLCAVHSVGLYSSSSVLCSSCSISSTFLPG 2837
Score = 82.2 bits (173), Expect(5) = 5e-047
Identities = 40/63 (63%), Positives = 47/63 (74%)
Frame = +3 / -2
Query: 747 *RFWTTTKVTGGW*SDSNDAQAFLMASSSYNRTW*NCPSLTPSL*NMILLGFCPVALQKE 926
*RF TT VTGG * S+DAQAF +AS+S ++T *NCPSLTPS * +I GFCPVA E
Sbjct: 2510 *RFCTTMNVTGG**FGSSDAQAFRIASNS*SKT**NCPSLTPSR*KIIRSGFCPVAFLNE 2331
Query: 927 MRR 935
+RR
Sbjct: 2330 IRR 2322
Score = 49.6 bits (102), Expect(3) = e-121
Identities = 21/36 (58%), Positives = 23/36 (63%)
Frame = -2 / +1
Query: 367 GPPPGARNTRAGAANVAVRPLPALKENVKRVMFYC* 260
G P +V V+PLPALKENVKRVMFYC*
Sbjct: 2860 GSPGKKNTKTTTVGDVGVKPLPALKENVKRVMFYC* 2967
Score = 43.2 bits (88), Expect(2) = 2e-021
Identities = 25/72 (34%), Positives = 36/72 (50%)
Frame = -1 / +3
Query: 935 PSHFFLEGDWTKTQEDHILQGWCQ*GTVLPSSVVRT*CH*KGLCIIGV*LPASSYFCRGP 756
PS+ + + KT +++L W + +L S + C+ KGLCI L A+
Sbjct: 2322 PSYLI*KSNRAKTASNYLLS*WSKRRAILSSFTL*VGCNSKGLCIA*TELSATGDIHSCT 2501
Query: 755 EASSHQVVC**S 720
EAS H VC**S
Sbjct: 2502 EASPHSFVC**S 2537
Score = 32.7 bits (65), Expect(5) = 5e-047
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +3 / -2
Query: 261 *Q*NMTRFTFSLRAGNGLTAT 323
*Q*N+T FTFS +AG G T T
Sbjct: 2966 *Q*NITLFTFSFKAGKGFTPT 2904
Score = 31.8 bits (63), Expect(3) = e-121
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -1 / +1
Query: 977 DPQRGTVSGGMIRE 936
DP RGTVSGGMIR+
Sbjct: 2281 DPVRGTVSGGMIRD 2322
Score = 22.6 bits (43), Expect(5) = 5e-047
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1 / -3
Query: 721 DY*QTTWCDDAS 756
DY*QT C DAS
Sbjct: 2536 DY*QTNECGDAS 2501
Score = 22.1 bits (42), Expect(5) = 5e-047
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +1 / -2
Query: 937 SLIMPPETVPLWG 975
SLI+PP TVP G
Sbjct: 2321 SLIIPPLTVPRTG 2283
>ref|NM_179453.1| Arabidopsis thaliana AGO1 (ARGONAUTE 1) AT1G48410 (AGO1) transcript
variant AT1G48410.2 mRNA, complete cds
Length = 3489
Score = 420 bits (912), Expect(2) = e-117
Identities = 171/207 (82%), Positives = 183/207 (88%)
Frame = -2 / +3
Query: 973 PKGGLSLVA*LGNLLISFWRATGQKPKRIIFYRDGVSEGQFYQVLLYELDAIRKACASLE 794
P+ G+ + LLI+F R+TG KP RIIFYRDGVSEGQFYQVLLYELDAIRKACASLE
Sbjct: 2592 PQKGVVTGGMIKELLIAFRRSTGHKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLE 2771
Query: 793 SDYQPPVTFVVVQKRHHTRLFVNNHNDQRAADRSGNILPGTVVDSKICHPTEFDFYLCSH 614
+ YQPPVTFVVVQKRHHTRLF NHND+ + DRSGNILPGTVVDSKICHPTEFDFYLCSH
Sbjct: 2772 AGYQPPVTFVVVQKRHHTRLFAQNHNDRHSVDRSGNILPGTVVDSKICHPTEFDFYLCSH 2951
Query: 613 AGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRA 434
AGIQGTSRPAHYHVLWDEN FTADGLQ+LTNNLCYTYARCTRSVSIVPPAYYAHLAAFRA
Sbjct: 2952 AGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRA 3131
Query: 433 RFYMEPDTSDSGSVASGATTSRGPPPG 353
RFYMEP+TSDSGS+ASG+ G G
Sbjct: 3132 RFYMEPETSDSGSMASGSMARGGGMAG 3212
Score = 208 bits (448), Expect = 3e-052
Identities = 95/200 (47%), Positives = 133/200 (66%)
Frame = +2 / -2
Query: 338 PGVARPWWRATACRSTARHRSAVTCIWLHVKPSSEGCQMSIVCRRND*Y*ACAPGIRVTQ 517
P A + C + H + V C+WLHV+ S + C M I+CR N+* *ACA IRVT
Sbjct: 3227 PACASTSHSTSTCHAPTSH*ATV*CLWLHVESSPKSC*MCIICRGNN*N*ACASCIRVT* 3048
Query: 518 VVGESLQPISRKFVLIPQNMIMGRTACSLNASMAAQVEIKLGWMANL*VHHSARQYVATS 697
V+G+ L+ I K VLIP+N++M R+ +LN SM +V++KL +A+ VH+SAR + TS
Sbjct: 3047 VIGQRLKSICSKVVLIPKNVVMSRSRSALNTSMTTEVKVKLCRVADFRVHNSAR*NIPTS 2868
Query: 698 IGSTLIIVIINKQPGVMTLLDHDKSNWRLVIRLQ*CTGLSNGIKFVQQNLVELSLTDTIP 877
+ IIV+++KQP VMTLL H K +W L+ Q TGL++GIKF++QNLV+LSLTD+IP
Sbjct: 2867 VHRMAIIVVLSKQPRVMTLLHHHKCHWWLITCFQRSTGLADGIKFIEQNLVKLSLTDSIP 2688
Query: 878 VEYDPLGFLSSRPPERNEKV 937
VE DP F+ S E E++
Sbjct: 2687 VEDDP*WFMPS*STEGYEQL 2628
Score = 199 bits (429), Expect(3) = 5e-065
Identities = 88/166 (53%), Positives = 111/166 (66%)
Frame = -1 / +2
Query: 911 DWTKTQEDHILQGWCQ*GTVLPSSVVRT*CH*KGLCIIGV*LPASSYFCRGPEASSHQVV 732
+W T +DH+LQGW Q*GT+LPS + T*CH +GLC G L +S C G EASSH+ V
Sbjct: 2654 NWA*TTKDHLLQGWSQ*GTILPSFAL*T*CHPQGLCFAGSRLSTTSDICGGAEASSHEAV 2833
Query: 731 C**SQ*SACCR*KWQHTAGHCGGLKDLPSNRV*FLPVQPCWHSGNKPSCPLSCSVG*EQI 552
C Q*S KW++ HC GL +LP RV* LP+ CW+SG+ +C L S+G*EQ+
Sbjct: 2834 CSEPQ*SPFGGQKWEYFTWHCCGL*NLPPYRV*LLPL*SCWYSGHFSTCSLPRSLG*EQL 3013
Query: 551 YG*WVANSHQQLVLHVCQVHTLSINRSSCILCSSGSLPSSVLHGAR 414
Y W + S Q L+LHVC++HTLS N S CILC+S S S+LHGAR
Sbjct: 3014 YCRWTSISDQ*LMLHVCKMHTLSFNCSPCILCTSSSF*GSILHGAR 3151
Score = 182 bits (391), Expect(2) = 5e-051
Identities = 84/173 (48%), Positives = 96/173 (55%)
Frame = +1 / -1
Query: 391 PQIRCHLYLAPCKTELGRLPDEHSMQEERLILSVCTWHTCNTSCW*EFATHQP*ICSHPT 570
P C + LAPC+ E +L D H+MQ E+L LSVC HTCN S W E H * CSHP
Sbjct: 3174 PLSHCLMSLAPCRIEP*KLLDVHNMQGEQLKLSVCILHTCNISYWSEIEVHLQ*SCSHPK 2995
Query: 571 EHDNGQDGLFPECQHGCTGRNQTRLDGKSLSPPQCPAVCCHFYRQHADHCDY*QTTWCDD 750
E N Q PE QH G++QT G+ SP QC HF + DHC QT CDD
Sbjct: 2994 ERGNEQVEKCPEYQHDYRGKSQTL*GGRF*SPQQCQVKYSHFCPPNGDHCGSEQTASCDD 2815
Query: 751 ASGPRQK*LEAGNQTPMMHRPF*WHQVRTTELGRTVPH*HHPCRI*SSWVFVQ 909
AS P Q L N P HRP WHQV +LG+ VPH* HPCR *S V+ Q
Sbjct: 2814 ASAPPQMSLVVDNLLPAKHRPCGWHQVHRAKLGKIVPH*LHPCRR*SLVVYAQ 2656
Score = 161 bits (347), Expect(2) = 8e-040
Identities = 87/174 (50%), Positives = 96/174 (55%)
Frame = -3 / +1
Query: 912 RLDKNPRGSYSTGMVSVRDSSTKFCCTNLMPLERPVHHWSLITSLQLLLSWSRSVITPGC 733
+L N GS STGM SVRD+ TKFC NLMP RPV W + + Q L W RSVIT GC
Sbjct: 2653 QLGINH*GSSSTGMESVRDNFTKFCSMNLMPSARPVLRWKQVINHQ*HLWWCRSVITRGC 2832
Query: 732 LLIITMISVLPIEVATYCRALWWTQRFAIQPSLISTCAAMLAFREQAVLPIIMFCGMRTN 553
LL TMI++ EV + AL WT + A SL T ML FR L I F GMRT
Sbjct: 2833 LLRTTMIAIRWTEVGIFYLALLWTLKSATLQSLTFTSVVMLVFRALLDLLITTFFGMRTT 3012
Query: 552 LRLMGCKLSPTTCVTRMPGAHAQYQSFLLHTMLIWQPSELGFTWSQIQVTADLW 391
L M L P T VTRM AHAQ+Q F LH M I Q L TWSQ T W
Sbjct: 3013 LLQMDFNL*PITYVTRMQDAHAQFQLFPLHIMHI*QLLGLDSTWSQRHQTVAQW 3174
Score = 145 bits (312), Expect(3) = 1e-059
Identities = 73/111 (65%), Positives = 79/111 (71%)
Frame = +3 / -3
Query: 354 PGGGPRLVVAPLATDPLSLVSGSM*NXXXXXXXXXXXXGGTIDTERVHLAYV*HKLLVRV 533
P P + PLA +PLS VSGSM*N GGTI+TERVHLAYV*HKLLVR
Sbjct: 3211 PAIPPPRAMLPLAIEPLSDVSGSM*NRALKAARCA*YAGGTIETERVHLAYV*HKLLVRD 3032
Query: 534 CNPSAVNLFSSHRT**WAGRLVP*MPAWLHR*KSNSVGWQIFESTTVPGSM 686
+PSAV LFSS RT * AGR VP*+PA L R*KSNSVGWQI ESTTVPG +
Sbjct: 3031 *SPSAVKLFSSQRTW**AGREVP*IPA*LQR*KSNSVGWQILESTTVPGKI 2879
Score = 94.5 bits (200), Expect(3) = 1e-059
Identities = 45/63 (71%), Positives = 50/63 (79%)
Frame = +3 / -3
Query: 741 V**RFWTTTKVTGGW*SDSNDAQAFLMASSSYNRTW*NCPSLTPSL*NMILLGFCPVALQ 920
V**RF TTT VTGG * S++AQA MASSS ++TW*NCPSLTPSL* MIL G CPV L+
Sbjct: 2824 V**RFCTTTNVTGG**PASSEAQALRMASSS*SKTW*NCPSLTPSL*KMILSGLCPVDLR 2645
Query: 921 KEM 929
K M
Sbjct: 2644 KAM 2636
Score = 60.6 bits (126), Expect(3) = 5e-065
Identities = 26/43 (60%), Positives = 30/43 (69%)
Frame = -2 / +3
Query: 388 SGATTSRGPPPGARNTRAGAANVAVRPLPALKENVKRVMFYC* 260
+ + +RG R+TR N AVRPLPALKENVKRVMFYC*
Sbjct: 3174 ASGSMARGGGMAGRSTRGPNVNAAVRPLPALKENVKRVMFYC* 3302
Score = 42.3 bits (86), Expect(2) = 5e-051
Identities = 21/39 (53%), Positives = 24/39 (61%)
Frame = +3 / -3
Query: 264 Q*NMTRFTFSLRAGNGLTATFAAPALVLRAPGGGPRLVV 380
Q*NMTRFTFS RAG+GLTA VL PR ++
Sbjct: 3298 Q*NMTRFTFSFRAGSGLTAALTLGPRVLLPAIPPPRAML 3182
Score = 31.8 bits (63), Expect(3) = 1e-059
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2 / -2
Query: 266 VEHDALHVFLEGR*WPHSNI 325
VEHD LH+ + WPH +I
Sbjct: 3296 VEHDTLHILFQSWEWPHCSI 3237
Score = 29.9 bits (59), Expect(3) = 5e-065
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = -1 / +3
Query: 977 DPQRGTVSGGMIRE 936
DPQ+G V+GGMI+E
Sbjct: 2589 DPQKGVVTGGMIKE 2630
Score = 26.3 bits (51), Expect(2) = e-117
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -3 / +1
Query: 333 VLQMLL*GHYLPSRKT*SASCSTAKI 256
++ ML *GH ++ *S SCSTA++
Sbjct: 3229 LMSMLQ*GHSQL*KRM*SVSCSTAEL 3306
Score = 24.9 bits (48), Expect(2) = 8e-040
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1 / +2
Query: 329 CKCCCEAITCPQGKREARHV 270
C+CC EA + + EA HV
Sbjct: 3233 CQCCSEATPSSERECEACHV 3292
>ref|NM_103737.2| Arabidopsis thaliana AGO1 (ARGONAUTE 1) AT1G48410 (AGO1) transcript
variant AT1G48410.1 mRNA, complete cds
Length = 3483
Score = 420 bits (912), Expect(2) = e-117
Identities = 171/207 (82%), Positives = 183/207 (88%)
Frame = -2 / +3
Query: 973 PKGGLSLVA*LGNLLISFWRATGQKPKRIIFYRDGVSEGQFYQVLLYELDAIRKACASLE 794
P+ G+ + LLI+F R+TG KP RIIFYRDGVSEGQFYQVLLYELDAIRKACASLE
Sbjct: 2586 PQKGVVTGGMIKELLIAFRRSTGHKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLE 2765
Query: 793 SDYQPPVTFVVVQKRHHTRLFVNNHNDQRAADRSGNILPGTVVDSKICHPTEFDFYLCSH 614
+ YQPPVTFVVVQKRHHTRLF NHND+ + DRSGNILPGTVVDSKICHPTEFDFYLCSH
Sbjct: 2766 AGYQPPVTFVVVQKRHHTRLFAQNHNDRHSVDRSGNILPGTVVDSKICHPTEFDFYLCSH 2945
Query: 613 AGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRA 434
AGIQGTSRPAHYHVLWDEN FTADGLQ+LTNNLCYTYARCTRSVSIVPPAYYAHLAAFRA
Sbjct: 2946 AGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRA 3125
Query: 433 RFYMEPDTSDSGSVASGATTSRGPPPG 353
RFYMEP+TSDSGS+ASG+ G G
Sbjct: 3126 RFYMEPETSDSGSMASGSMARGGGMAG 3206
Score = 208 bits (448), Expect = 3e-052
Identities = 95/200 (47%), Positives = 133/200 (66%)
Frame = +2 / -2
Query: 338 PGVARPWWRATACRSTARHRSAVTCIWLHVKPSSEGCQMSIVCRRND*Y*ACAPGIRVTQ 517
P A + C + H + V C+WLHV+ S + C M I+CR N+* *ACA IRVT
Sbjct: 3221 PACASTSHSTSTCHAPTSH*ATV*CLWLHVESSPKSC*MCIICRGNN*N*ACASCIRVT* 3042
Query: 518 VVGESLQPISRKFVLIPQNMIMGRTACSLNASMAAQVEIKLGWMANL*VHHSARQYVATS 697
V+G+ L+ I K VLIP+N++M R+ +LN SM +V++KL +A+ VH+SAR + TS
Sbjct: 3041 VIGQRLKSICSKVVLIPKNVVMSRSRSALNTSMTTEVKVKLCRVADFRVHNSAR*NIPTS 2862
Query: 698 IGSTLIIVIINKQPGVMTLLDHDKSNWRLVIRLQ*CTGLSNGIKFVQQNLVELSLTDTIP 877
+ IIV+++KQP VMTLL H K +W L+ Q TGL++GIKF++QNLV+LSLTD+IP
Sbjct: 2861 VHRMAIIVVLSKQPRVMTLLHHHKCHWWLITCFQRSTGLADGIKFIEQNLVKLSLTDSIP 2682
Query: 878 VEYDPLGFLSSRPPERNEKV 937
VE DP F+ S E E++
Sbjct: 2681 VEDDP*WFMPS*STEGYEQL 2622
Score = 199 bits (429), Expect(3) = 5e-065
Identities = 88/166 (53%), Positives = 111/166 (66%)
Frame = -1 / +2
Query: 911 DWTKTQEDHILQGWCQ*GTVLPSSVVRT*CH*KGLCIIGV*LPASSYFCRGPEASSHQVV 732
+W T +DH+LQGW Q*GT+LPS + T*CH +GLC G L +S C G EASSH+ V
Sbjct: 2648 NWA*TTKDHLLQGWSQ*GTILPSFAL*T*CHPQGLCFAGSRLSTTSDICGGAEASSHEAV 2827
Query: 731 C**SQ*SACCR*KWQHTAGHCGGLKDLPSNRV*FLPVQPCWHSGNKPSCPLSCSVG*EQI 552
C Q*S KW++ HC GL +LP RV* LP+ CW+SG+ +C L S+G*EQ+
Sbjct: 2828 CSEPQ*SPFGGQKWEYFTWHCCGL*NLPPYRV*LLPL*SCWYSGHFSTCSLPRSLG*EQL 3007
Query: 551 YG*WVANSHQQLVLHVCQVHTLSINRSSCILCSSGSLPSSVLHGAR 414
Y W + S Q L+LHVC++HTLS N S CILC+S S S+LHGAR
Sbjct: 3008 YCRWTSISDQ*LMLHVCKMHTLSFNCSPCILCTSSSF*GSILHGAR 3145
Score = 182 bits (391), Expect(2) = 5e-051
Identities = 84/173 (48%), Positives = 96/173 (55%)
Frame = +1 / -1
Query: 391 PQIRCHLYLAPCKTELGRLPDEHSMQEERLILSVCTWHTCNTSCW*EFATHQP*ICSHPT 570
P C + LAPC+ E +L D H+MQ E+L LSVC HTCN S W E H * CSHP
Sbjct: 3168 PLSHCLMSLAPCRIEP*KLLDVHNMQGEQLKLSVCILHTCNISYWSEIEVHLQ*SCSHPK 2989
Query: 571 EHDNGQDGLFPECQHGCTGRNQTRLDGKSLSPPQCPAVCCHFYRQHADHCDY*QTTWCDD 750
E N Q PE QH G++QT G+ SP QC HF + DHC QT CDD
Sbjct: 2988 ERGNEQVEKCPEYQHDYRGKSQTL*GGRF*SPQQCQVKYSHFCPPNGDHCGSEQTASCDD 2809
Query: 751 ASGPRQK*LEAGNQTPMMHRPF*WHQVRTTELGRTVPH*HHPCRI*SSWVFVQ 909
AS P Q L N P HRP WHQV +LG+ VPH* HPCR *S V+ Q
Sbjct: 2808 ASAPPQMSLVVDNLLPAKHRPCGWHQVHRAKLGKIVPH*LHPCRR*SLVVYAQ 2650
Score = 161 bits (347), Expect(2) = 8e-040
Identities = 87/174 (50%), Positives = 96/174 (55%)
Frame = -3 / +1
Query: 912 RLDKNPRGSYSTGMVSVRDSSTKFCCTNLMPLERPVHHWSLITSLQLLLSWSRSVITPGC 733
+L N GS STGM SVRD+ TKFC NLMP RPV W + + Q L W RSVIT GC
Sbjct: 2647 QLGINH*GSSSTGMESVRDNFTKFCSMNLMPSARPVLRWKQVINHQ*HLWWCRSVITRGC 2826
Query: 732 LLIITMISVLPIEVATYCRALWWTQRFAIQPSLISTCAAMLAFREQAVLPIIMFCGMRTN 553
LL TMI++ EV + AL WT + A SL T ML FR L I F GMRT
Sbjct: 2827 LLRTTMIAIRWTEVGIFYLALLWTLKSATLQSLTFTSVVMLVFRALLDLLITTFFGMRTT 3006
Query: 552 LRLMGCKLSPTTCVTRMPGAHAQYQSFLLHTMLIWQPSELGFTWSQIQVTADLW 391
L M L P T VTRM AHAQ+Q F LH M I Q L TWSQ T W
Sbjct: 3007 LLQMDFNL*PITYVTRMQDAHAQFQLFPLHIMHI*QLLGLDSTWSQRHQTVAQW 3168
Score = 145 bits (312), Expect(3) = 1e-059
Identities = 73/111 (65%), Positives = 79/111 (71%)
Frame = +3 / -3
Query: 354 PGGGPRLVVAPLATDPLSLVSGSM*NXXXXXXXXXXXXGGTIDTERVHLAYV*HKLLVRV 533
P P + PLA +PLS VSGSM*N GGTI+TERVHLAYV*HKLLVR
Sbjct: 3205 PAIPPPRAMLPLAIEPLSDVSGSM*NRALKAARCA*YAGGTIETERVHLAYV*HKLLVRD 3026
Query: 534 CNPSAVNLFSSHRT**WAGRLVP*MPAWLHR*KSNSVGWQIFESTTVPGSM 686
+PSAV LFSS RT * AGR VP*+PA L R*KSNSVGWQI ESTTVPG +
Sbjct: 3025 *SPSAVKLFSSQRTW**AGREVP*IPA*LQR*KSNSVGWQILESTTVPGKI 2873
Score = 94.5 bits (200), Expect(3) = 1e-059
Identities = 45/63 (71%), Positives = 50/63 (79%)
Frame = +3 / -3
Query: 741 V**RFWTTTKVTGGW*SDSNDAQAFLMASSSYNRTW*NCPSLTPSL*NMILLGFCPVALQ 920
V**RF TTT VTGG * S++AQA MASSS ++TW*NCPSLTPSL* MIL G CPV L+
Sbjct: 2818 V**RFCTTTNVTGG**PASSEAQALRMASSS*SKTW*NCPSLTPSL*KMILSGLCPVDLR 2639
Query: 921 KEM 929
K M
Sbjct: 2638 KAM 2630
Score = 60.6 bits (126), Expect(3) = 5e-065
Identities = 26/43 (60%), Positives = 30/43 (69%)
Frame = -2 / +3
Query: 388 SGATTSRGPPPGARNTRAGAANVAVRPLPALKENVKRVMFYC* 260
+ + +RG R+TR N AVRPLPALKENVKRVMFYC*
Sbjct: 3168 ASGSMARGGGMAGRSTRGPNVNAAVRPLPALKENVKRVMFYC* 3296
Score = 42.3 bits (86), Expect(2) = 5e-051
Identities = 21/39 (53%), Positives = 24/39 (61%)
Frame = +3 / -3
Query: 264 Q*NMTRFTFSLRAGNGLTATFAAPALVLRAPGGGPRLVV 380
Q*NMTRFTFS RAG+GLTA VL PR ++
Sbjct: 3292 Q*NMTRFTFSFRAGSGLTAALTLGPRVLLPAIPPPRAML 3176
Score = 31.8 bits (63), Expect(3) = 1e-059
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2 / -2
Query: 266 VEHDALHVFLEGR*WPHSNI 325
VEHD LH+ + WPH +I
Sbjct: 3290 VEHDTLHILFQSWEWPHCSI 3231
Score = 29.9 bits (59), Expect(3) = 5e-065
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = -1 / +3
Query: 977 DPQRGTVSGGMIRE 936
DPQ+G V+GGMI+E
Sbjct: 2583 DPQKGVVTGGMIKE 2624
Score = 26.3 bits (51), Expect(2) = e-117
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -3 / +1
Query: 333 VLQMLL*GHYLPSRKT*SASCSTAKI 256
++ ML *GH ++ *S SCSTA++
Sbjct: 3223 LMSMLQ*GHSQL*KRM*SVSCSTAEL 3300
Score = 24.9 bits (48), Expect(2) = 8e-040
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1 / +2
Query: 329 CKCCCEAITCPQGKREARHV 270
C+CC EA + + EA HV
Sbjct: 3227 CQCCSEATPSSERECEACHV 3286
>gb|U91995.1|ATU91995 Arabidopsis thaliana Argonaute protein (AGO1) mRNA, complete cds
Length = 3473
Score = 420 bits (912), Expect(2) = e-117
Identities = 171/207 (82%), Positives = 183/207 (88%)
Frame = -2 / +1
Query: 973 PKGGLSLVA*LGNLLISFWRATGQKPKRIIFYRDGVSEGQFYQVLLYELDAIRKACASLE 794
P+ G+ + LLI+F R+TG KP RIIFYRDGVSEGQFYQVLLYELDAIRKACASLE
Sbjct: 2563 PQKGVVTGGMIKELLIAFRRSTGHKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLE 2742
Query: 793 SDYQPPVTFVVVQKRHHTRLFVNNHNDQRAADRSGNILPGTVVDSKICHPTEFDFYLCSH 614
+ YQPPVTFVVVQKRHHTRLF NHND+ + DRSGNILPGTVVDSKICHPTEFDFYLCSH
Sbjct: 2743 AGYQPPVTFVVVQKRHHTRLFAQNHNDRHSVDRSGNILPGTVVDSKICHPTEFDFYLCSH 2922
Query: 613 AGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRA 434
AGIQGTSRPAHYHVLWDEN FTADGLQ+LTNNLCYTYARCTRSVSIVPPAYYAHLAAFRA
Sbjct: 2923 AGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRA 3102
Query: 433 RFYMEPDTSDSGSVASGATTSRGPPPG 353
RFYMEP+TSDSGS+ASG+ G G
Sbjct: 3103 RFYMEPETSDSGSMASGSMARGGGMAG 3183
Score = 208 bits (448), Expect = 3e-052
Identities = 95/200 (47%), Positives = 133/200 (66%)
Frame = +2 / -3
Query: 338 PGVARPWWRATACRSTARHRSAVTCIWLHVKPSSEGCQMSIVCRRND*Y*ACAPGIRVTQ 517
P A + C + H + V C+WLHV+ S + C M I+CR N+* *ACA IRVT
Sbjct: 3198 PACASTSHSTSTCHAPTSH*ATV*CLWLHVESSPKSC*MCIICRGNN*N*ACASCIRVT* 3019
Query: 518 VVGESLQPISRKFVLIPQNMIMGRTACSLNASMAAQVEIKLGWMANL*VHHSARQYVATS 697
V+G+ L+ I K VLIP+N++M R+ +LN SM +V++KL +A+ VH+SAR + TS
Sbjct: 3018 VIGQRLKSICSKVVLIPKNVVMSRSRSALNTSMTTEVKVKLCRVADFRVHNSAR*NIPTS 2839
Query: 698 IGSTLIIVIINKQPGVMTLLDHDKSNWRLVIRLQ*CTGLSNGIKFVQQNLVELSLTDTIP 877
+ IIV+++KQP VMTLL H K +W L+ Q TGL++GIKF++QNLV+LSLTD+IP
Sbjct: 2838 VHRMAIIVVLSKQPRVMTLLHHHKCHWWLITCFQRSTGLADGIKFIEQNLVKLSLTDSIP 2659
Query: 878 VEYDPLGFLSSRPPERNEKV 937
VE DP F+ S E E++
Sbjct: 2658 VEDDP*WFMPS*STEGYEQL 2599
Score = 199 bits (429), Expect(3) = 5e-065
Identities = 88/166 (53%), Positives = 111/166 (66%)
Frame = -1 / +3
Query: 911 DWTKTQEDHILQGWCQ*GTVLPSSVVRT*CH*KGLCIIGV*LPASSYFCRGPEASSHQVV 732
+W T +DH+LQGW Q*GT+LPS + T*CH +GLC G L +S C G EASSH+ V
Sbjct: 2625 NWA*TTKDHLLQGWSQ*GTILPSFAL*T*CHPQGLCFAGSRLSTTSDICGGAEASSHEAV 2804
Query: 731 C**SQ*SACCR*KWQHTAGHCGGLKDLPSNRV*FLPVQPCWHSGNKPSCPLSCSVG*EQI 552
C Q*S KW++ HC GL +LP RV* LP+ CW+SG+ +C L S+G*EQ+
Sbjct: 2805 CSEPQ*SPFGGQKWEYFTWHCCGL*NLPPYRV*LLPL*SCWYSGHFSTCSLPRSLG*EQL 2984
Query: 551 YG*WVANSHQQLVLHVCQVHTLSINRSSCILCSSGSLPSSVLHGAR 414
Y W + S Q L+LHVC++HTLS N S CILC+S S S+LHGAR
Sbjct: 2985 YCRWTSISDQ*LMLHVCKMHTLSFNCSPCILCTSSSF*GSILHGAR 3122
Score = 182 bits (391), Expect(2) = 5e-051
Identities = 84/173 (48%), Positives = 96/173 (55%)
Frame = +1 / -2
Query: 391 PQIRCHLYLAPCKTELGRLPDEHSMQEERLILSVCTWHTCNTSCW*EFATHQP*ICSHPT 570
P C + LAPC+ E +L D H+MQ E+L LSVC HTCN S W E H * CSHP
Sbjct: 3145 PLSHCLMSLAPCRIEP*KLLDVHNMQGEQLKLSVCILHTCNISYWSEIEVHLQ*SCSHPK 2966
Query: 571 EHDNGQDGLFPECQHGCTGRNQTRLDGKSLSPPQCPAVCCHFYRQHADHCDY*QTTWCDD 750
E N Q PE QH G++QT G+ SP QC HF + DHC QT CDD
Sbjct: 2965 ERGNEQVEKCPEYQHDYRGKSQTL*GGRF*SPQQCQVKYSHFCPPNGDHCGSEQTASCDD 2786
Query: 751 ASGPRQK*LEAGNQTPMMHRPF*WHQVRTTELGRTVPH*HHPCRI*SSWVFVQ 909
AS P Q L N P HRP WHQV +LG+ VPH* HPCR *S V+ Q
Sbjct: 2785 ASAPPQMSLVVDNLLPAKHRPCGWHQVHRAKLGKIVPH*LHPCRR*SLVVYAQ 2627
Score = 161 bits (347), Expect(2) = 8e-040
Identities = 87/174 (50%), Positives = 96/174 (55%)
Frame = -3 / +2
Query: 912 RLDKNPRGSYSTGMVSVRDSSTKFCCTNLMPLERPVHHWSLITSLQLLLSWSRSVITPGC 733
+L N GS STGM SVRD+ TKFC NLMP RPV W + + Q L W RSVIT GC
Sbjct: 2624 QLGINH*GSSSTGMESVRDNFTKFCSMNLMPSARPVLRWKQVINHQ*HLWWCRSVITRGC 2803
Query: 732 LLIITMISVLPIEVATYCRALWWTQRFAIQPSLISTCAAMLAFREQAVLPIIMFCGMRTN 553
LL TMI++ EV + AL WT + A SL T ML FR L I F GMRT
Sbjct: 2804 LLRTTMIAIRWTEVGIFYLALLWTLKSATLQSLTFTSVVMLVFRALLDLLITTFFGMRTT 2983
Query: 552 LRLMGCKLSPTTCVTRMPGAHAQYQSFLLHTMLIWQPSELGFTWSQIQVTADLW 391
L M L P T VTRM AHAQ+Q F LH M I Q L TWSQ T W
Sbjct: 2984 LLQMDFNL*PITYVTRMQDAHAQFQLFPLHIMHI*QLLGLDSTWSQRHQTVAQW 3145
Score = 145 bits (312), Expect(3) = 1e-059
Identities = 73/111 (65%), Positives = 79/111 (71%)
Frame = +3 / -1
Query: 354 PGGGPRLVVAPLATDPLSLVSGSM*NXXXXXXXXXXXXGGTIDTERVHLAYV*HKLLVRV 533
P P + PLA +PLS VSGSM*N GGTI+TERVHLAYV*HKLLVR
Sbjct: 3182 PAIPPPRAMLPLAIEPLSDVSGSM*NRALKAARCA*YAGGTIETERVHLAYV*HKLLVRD 3003
Query: 534 CNPSAVNLFSSHRT**WAGRLVP*MPAWLHR*KSNSVGWQIFESTTVPGSM 686
+PSAV LFSS RT * AGR VP*+PA L R*KSNSVGWQI ESTTVPG +
Sbjct: 3002 *SPSAVKLFSSQRTW**AGREVP*IPA*LQR*KSNSVGWQILESTTVPGKI 2850
Score = 94.5 bits (200), Expect(3) = 1e-059
Identities = 45/63 (71%), Positives = 50/63 (79%)
Frame = +3 / -1
Query: 741 V**RFWTTTKVTGGW*SDSNDAQAFLMASSSYNRTW*NCPSLTPSL*NMILLGFCPVALQ 920
V**RF TTT VTGG * S++AQA MASSS ++TW*NCPSLTPSL* MIL G CPV L+
Sbjct: 2795 V**RFCTTTNVTGG**PASSEAQALRMASSS*SKTW*NCPSLTPSL*KMILSGLCPVDLR 2616
Query: 921 KEM 929
K M
Sbjct: 2615 KAM 2607
Score = 60.6 bits (126), Expect(3) = 5e-065
Identities = 26/43 (60%), Positives = 30/43 (69%)
Frame = -2 / +1
Query: 388 SGATTSRGPPPGARNTRAGAANVAVRPLPALKENVKRVMFYC* 260
+ + +RG R+TR N AVRPLPALKENVKRVMFYC*
Sbjct: 3145 ASGSMARGGGMAGRSTRGPNVNAAVRPLPALKENVKRVMFYC* 3273
Score = 42.3 bits (86), Expect(2) = 5e-051
Identities = 21/39 (53%), Positives = 24/39 (61%)
Frame = +3 / -1
Query: 264 Q*NMTRFTFSLRAGNGLTATFAAPALVLRAPGGGPRLVV 380
Q*NMTRFTFS RAG+GLTA VL PR ++
Sbjct: 3269 Q*NMTRFTFSFRAGSGLTAALTLGPRVLLPAIPPPRAML 3153
Score = 31.8 bits (63), Expect(3) = 1e-059
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2 / -3
Query: 266 VEHDALHVFLEGR*WPHSNI 325
VEHD LH+ + WPH +I
Sbjct: 3267 VEHDTLHILFQSWEWPHCSI 3208
Score = 29.9 bits (59), Expect(3) = 5e-065
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = -1 / +1
Query: 977 DPQRGTVSGGMIRE 936
DPQ+G V+GGMI+E
Sbjct: 2560 DPQKGVVTGGMIKE 2601
Score = 26.3 bits (51), Expect(2) = e-117
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -3 / +2
Query: 333 VLQMLL*GHYLPSRKT*SASCSTAKI 256
++ ML *GH ++ *S SCSTA++
Sbjct: 3200 LMSMLQ*GHSQL*KRM*SVSCSTAEL 3277
Score = 24.9 bits (48), Expect(2) = 8e-040
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1 / +3
Query: 329 CKCCCEAITCPQGKREARHV 270
C+CC EA + + EA HV
Sbjct: 3204 CQCCSEATPSSERECEACHV 3263
>gb|BT000941.1| Arabidopsis thaliana clone C105223 putative leaf development protein
Argonaute (At1g48410) mRNA, complete cds
Length = 3177
Score = 420 bits (912), Expect(2) = e-117
Identities = 171/207 (82%), Positives = 183/207 (88%)
Frame = -2 / +1
Query: 973 PKGGLSLVA*LGNLLISFWRATGQKPKRIIFYRDGVSEGQFYQVLLYELDAIRKACASLE 794
P+ G+ + LLI+F R+TG KP RIIFYRDGVSEGQFYQVLLYELDAIRKACASLE
Sbjct: 2437 PQKGVVTGGMIKELLIAFRRSTGHKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLE 2616
Query: 793 SDYQPPVTFVVVQKRHHTRLFVNNHNDQRAADRSGNILPGTVVDSKICHPTEFDFYLCSH 614
+ YQPPVTFVVVQKRHHTRLF NHND+ + DRSGNILPGTVVDSKICHPTEFDFYLCSH
Sbjct: 2617 AGYQPPVTFVVVQKRHHTRLFAQNHNDRHSVDRSGNILPGTVVDSKICHPTEFDFYLCSH 2796
Query: 613 AGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRA 434
AGIQGTSRPAHYHVLWDEN FTADGLQ+LTNNLCYTYARCTRSVSIVPPAYYAHLAAFRA
Sbjct: 2797 AGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRA 2976
Query: 433 RFYMEPDTSDSGSVASGATTSRGPPPG 353
RFYMEP+TSDSGS+ASG+ G G
Sbjct: 2977 RFYMEPETSDSGSMASGSMARGGGMAG 3057
Score = 208 bits (448), Expect = 3e-052
Identities = 95/200 (47%), Positives = 133/200 (66%)
Frame = +2 / -1
Query: 338 PGVARPWWRATACRSTARHRSAVTCIWLHVKPSSEGCQMSIVCRRND*Y*ACAPGIRVTQ 517
P A + C + H + V C+WLHV+ S + C M I+CR N+* *ACA IRVT
Sbjct: 3072 PACASTSHSTSTCHAPTSH*ATV*CLWLHVESSPKSC*MCIICRGNN*N*ACASCIRVT* 2893
Query: 518 VVGESLQPISRKFVLIPQNMIMGRTACSLNASMAAQVEIKLGWMANL*VHHSARQYVATS 697
V+G+ L+ I K VLIP+N++M R+ +LN SM +V++KL +A+ VH+SAR + TS
Sbjct: 2892 VIGQRLKSICSKVVLIPKNVVMSRSRSALNTSMTTEVKVKLCRVADFRVHNSAR*NIPTS 2713
Query: 698 IGSTLIIVIINKQPGVMTLLDHDKSNWRLVIRLQ*CTGLSNGIKFVQQNLVELSLTDTIP 877
+ IIV+++KQP VMTLL H K +W L+ Q TGL++GIKF++QNLV+LSLTD+IP
Sbjct: 2712 VHRMAIIVVLSKQPRVMTLLHHHKCHWWLITCFQRSTGLADGIKFIEQNLVKLSLTDSIP 2533
Query: 878 VEYDPLGFLSSRPPERNEKV 937
VE DP F+ S E E++
Sbjct: 2532 VEDDP*WFMPS*STEGYEQL 2473
Score = 199 bits (429), Expect(3) = 5e-065
Identities = 88/166 (53%), Positives = 111/166 (66%)
Frame = -1 / +3
Query: 911 DWTKTQEDHILQGWCQ*GTVLPSSVVRT*CH*KGLCIIGV*LPASSYFCRGPEASSHQVV 732
+W T +DH+LQGW Q*GT+LPS + T*CH +GLC G L +S C G EASSH+ V
Sbjct: 2499 NWA*TTKDHLLQGWSQ*GTILPSFAL*T*CHPQGLCFAGSRLSTTSDICGGAEASSHEAV 2678
Query: 731 C**SQ*SACCR*KWQHTAGHCGGLKDLPSNRV*FLPVQPCWHSGNKPSCPLSCSVG*EQI 552
C Q*S KW++ HC GL +LP RV* LP+ CW+SG+ +C L S+G*EQ+
Sbjct: 2679 CSEPQ*SPFGGQKWEYFTWHCCGL*NLPPYRV*LLPL*SCWYSGHFSTCSLPRSLG*EQL 2858
Query: 551 YG*WVANSHQQLVLHVCQVHTLSINRSSCILCSSGSLPSSVLHGAR 414
Y W + S Q L+LHVC++HTLS N S CILC+S S S+LHGAR
Sbjct: 2859 YCRWTSISDQ*LMLHVCKMHTLSFNCSPCILCTSSSF*GSILHGAR 2996
Score = 182 bits (391), Expect(2) = 5e-051
Identities = 84/173 (48%), Positives = 96/173 (55%)
Frame = +1 / -3
Query: 391 PQIRCHLYLAPCKTELGRLPDEHSMQEERLILSVCTWHTCNTSCW*EFATHQP*ICSHPT 570
P C + LAPC+ E +L D H+MQ E+L LSVC HTCN S W E H * CSHP
Sbjct: 3019 PLSHCLMSLAPCRIEP*KLLDVHNMQGEQLKLSVCILHTCNISYWSEIEVHLQ*SCSHPK 2840
Query: 571 EHDNGQDGLFPECQHGCTGRNQTRLDGKSLSPPQCPAVCCHFYRQHADHCDY*QTTWCDD 750
E N Q PE QH G++QT G+ SP QC HF + DHC QT CDD
Sbjct: 2839 ERGNEQVEKCPEYQHDYRGKSQTL*GGRF*SPQQCQVKYSHFCPPNGDHCGSEQTASCDD 2660
Query: 751 ASGPRQK*LEAGNQTPMMHRPF*WHQVRTTELGRTVPH*HHPCRI*SSWVFVQ 909
AS P Q L N P HRP WHQV +LG+ VPH* HPCR *S V+ Q
Sbjct: 2659 ASAPPQMSLVVDNLLPAKHRPCGWHQVHRAKLGKIVPH*LHPCRR*SLVVYAQ 2501
Score = 161 bits (347), Expect(2) = 8e-040
Identities = 87/174 (50%), Positives = 96/174 (55%)
Frame = -3 / +2
Query: 912 RLDKNPRGSYSTGMVSVRDSSTKFCCTNLMPLERPVHHWSLITSLQLLLSWSRSVITPGC 733
+L N GS STGM SVRD+ TKFC NLMP RPV W + + Q L W RSVIT GC
Sbjct: 2498 QLGINH*GSSSTGMESVRDNFTKFCSMNLMPSARPVLRWKQVINHQ*HLWWCRSVITRGC 2677
Query: 732 LLIITMISVLPIEVATYCRALWWTQRFAIQPSLISTCAAMLAFREQAVLPIIMFCGMRTN 553
LL TMI++ EV + AL WT + A SL T ML FR L I F GMRT
Sbjct: 2678 LLRTTMIAIRWTEVGIFYLALLWTLKSATLQSLTFTSVVMLVFRALLDLLITTFFGMRTT 2857
Query: 552 LRLMGCKLSPTTCVTRMPGAHAQYQSFLLHTMLIWQPSELGFTWSQIQVTADLW 391
L M L P T VTRM AHAQ+Q F LH M I Q L TWSQ T W
Sbjct: 2858 LLQMDFNL*PITYVTRMQDAHAQFQLFPLHIMHI*QLLGLDSTWSQRHQTVAQW 3019
Score = 145 bits (312), Expect(3) = 1e-059
Identities = 73/111 (65%), Positives = 79/111 (71%)
Frame = +3 / -2
Query: 354 PGGGPRLVVAPLATDPLSLVSGSM*NXXXXXXXXXXXXGGTIDTERVHLAYV*HKLLVRV 533
P P + PLA +PLS VSGSM*N GGTI+TERVHLAYV*HKLLVR
Sbjct: 3056 PAIPPPRAMLPLAIEPLSDVSGSM*NRALKAARCA*YAGGTIETERVHLAYV*HKLLVRD 2877
Query: 534 CNPSAVNLFSSHRT**WAGRLVP*MPAWLHR*KSNSVGWQIFESTTVPGSM 686
+PSAV LFSS RT * AGR VP*+PA L R*KSNSVGWQI ESTTVPG +
Sbjct: 2876 *SPSAVKLFSSQRTW**AGREVP*IPA*LQR*KSNSVGWQILESTTVPGKI 2724
Score = 94.5 bits (200), Expect(3) = 1e-059
Identities = 45/63 (71%), Positives = 50/63 (79%)
Frame = +3 / -2
Query: 741 V**RFWTTTKVTGGW*SDSNDAQAFLMASSSYNRTW*NCPSLTPSL*NMILLGFCPVALQ 920
V**RF TTT VTGG * S++AQA MASSS ++TW*NCPSLTPSL* MIL G CPV L+
Sbjct: 2669 V**RFCTTTNVTGG**PASSEAQALRMASSS*SKTW*NCPSLTPSL*KMILSGLCPVDLR 2490
Query: 921 KEM 929
K M
Sbjct: 2489 KAM 2481
Score = 60.6 bits (126), Expect(3) = 5e-065
Identities = 26/43 (60%), Positives = 30/43 (69%)
Frame = -2 / +1
Query: 388 SGATTSRGPPPGARNTRAGAANVAVRPLPALKENVKRVMFYC* 260
+ + +RG R+TR N AVRPLPALKENVKRVMFYC*
Sbjct: 3019 ASGSMARGGGMAGRSTRGPNVNAAVRPLPALKENVKRVMFYC* 3147
Score = 42.3 bits (86), Expect(2) = 5e-051
Identities = 21/39 (53%), Positives = 24/39 (61%)
Frame = +3 / -2
Query: 264 Q*NMTRFTFSLRAGNGLTATFAAPALVLRAPGGGPRLVV 380
Q*NMTRFTFS RAG+GLTA VL PR ++
Sbjct: 3143 Q*NMTRFTFSFRAGSGLTAALTLGPRVLLPAIPPPRAML 3027
Score = 31.8 bits (63), Expect(3) = 1e-059
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2 / -1
Query: 266 VEHDALHVFLEGR*WPHSNI 325
VEHD LH+ + WPH +I
Sbjct: 3141 VEHDTLHILFQSWEWPHCSI 3082
Score = 29.9 bits (59), Expect(3) = 5e-065
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = -1 / +1
Query: 977 DPQRGTVSGGMIRE 936
DPQ+G V+GGMI+E
Sbjct: 2434 DPQKGVVTGGMIKE 2475
Score = 26.3 bits (51), Expect(2) = e-117
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -3 / +2
Query: 333 VLQMLL*GHYLPSRKT*SASCSTAKI 256
++ ML *GH ++ *S SCSTA++
Sbjct: 3074 LMSMLQ*GHSQL*KRM*SVSCSTAEL 3151
Score = 24.9 bits (48), Expect(2) = 8e-040
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1 / +3
Query: 329 CKCCCEAITCPQGKREARHV 270
C+CC EA + + EA HV
Sbjct: 3078 CQCCSEATPSSERECEACHV 3137
>gb|AY080690.1| Arabidopsis thaliana At1g48410 mRNA sequence
Length = 2764
Score = 420 bits (912), Expect(2) = e-117
Identities = 171/207 (82%), Positives = 183/207 (88%)
Frame = -2 / +2
Query: 973 PKGGLSLVA*LGNLLISFWRATGQKPKRIIFYRDGVSEGQFYQVLLYELDAIRKACASLE 794
P+ G+ + LLI+F R+TG KP RIIFYRDGVSEGQFYQVLLYELDAIRKACASLE
Sbjct: 1835 PQKGVVTGGMIKELLIAFRRSTGHKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLE 2014
Query: 793 SDYQPPVTFVVVQKRHHTRLFVNNHNDQRAADRSGNILPGTVVDSKICHPTEFDFYLCSH 614
+ YQPPVTFVVVQKRHHTRLF NHND+ + DRSGNILPGTVVDSKICHPTEFDFYLCSH
Sbjct: 2015 AGYQPPVTFVVVQKRHHTRLFAQNHNDRHSVDRSGNILPGTVVDSKICHPTEFDFYLCSH 2194
Query: 613 AGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRA 434
AGIQGTSRPAHYHVLWDEN FTADGLQ+LTNNLCYTYARCTRSVSIVPPAYYAHLAAFRA
Sbjct: 2195 AGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRA 2374
Query: 433 RFYMEPDTSDSGSVASGATTSRGPPPG 353
RFYMEP+TSDSGS+ASG+ G G
Sbjct: 2375 RFYMEPETSDSGSMASGSMARGGGMAG 2455
Score = 208 bits (448), Expect = 3e-052
Identities = 95/200 (47%), Positives = 133/200 (66%)
Frame = +2 / -1
Query: 338 PGVARPWWRATACRSTARHRSAVTCIWLHVKPSSEGCQMSIVCRRND*Y*ACAPGIRVTQ 517
P A + C + H + V C+WLHV+ S + C M I+CR N+* *ACA IRVT
Sbjct: 2470 PACASTSHSTSTCHAPTSH*ATV*CLWLHVESSPKSC*MCIICRGNN*N*ACASCIRVT* 2291
Query: 518 VVGESLQPISRKFVLIPQNMIMGRTACSLNASMAAQVEIKLGWMANL*VHHSARQYVATS 697
V+G+ L+ I K VLIP+N++M R+ +LN SM +V++KL +A+ VH+SAR + TS
Sbjct: 2290 VIGQRLKSICSKVVLIPKNVVMSRSRSALNTSMTTEVKVKLCRVADFRVHNSAR*NIPTS 2111
Query: 698 IGSTLIIVIINKQPGVMTLLDHDKSNWRLVIRLQ*CTGLSNGIKFVQQNLVELSLTDTIP 877
+ IIV+++KQP VMTLL H K +W L+ Q TGL++GIKF++QNLV+LSLTD+IP
Sbjct: 2110 VHRMAIIVVLSKQPRVMTLLHHHKCHWWLITCFQRSTGLADGIKFIEQNLVKLSLTDSIP 1931
Query: 878 VEYDPLGFLSSRPPERNEKV 937
VE DP F+ S E E++
Sbjct: 1930 VEDDP*WFMPS*STEGYEQL 1871
Score = 199 bits (429), Expect(3) = 5e-065
Identities = 88/166 (53%), Positives = 111/166 (66%)
Frame = -1 / +1
Query: 911 DWTKTQEDHILQGWCQ*GTVLPSSVVRT*CH*KGLCIIGV*LPASSYFCRGPEASSHQVV 732
+W T +DH+LQGW Q*GT+LPS + T*CH +GLC G L +S C G EASSH+ V
Sbjct: 1897 NWA*TTKDHLLQGWSQ*GTILPSFAL*T*CHPQGLCFAGSRLSTTSDICGGAEASSHEAV 2076
Query: 731 C**SQ*SACCR*KWQHTAGHCGGLKDLPSNRV*FLPVQPCWHSGNKPSCPLSCSVG*EQI 552
C Q*S KW++ HC GL +LP RV* LP+ CW+SG+ +C L S+G*EQ+
Sbjct: 2077 CSEPQ*SPFGGQKWEYFTWHCCGL*NLPPYRV*LLPL*SCWYSGHFSTCSLPRSLG*EQL 2256
Query: 551 YG*WVANSHQQLVLHVCQVHTLSINRSSCILCSSGSLPSSVLHGAR 414
Y W + S Q L+LHVC++HTLS N S CILC+S S S+LHGAR
Sbjct: 2257 YCRWTSISDQ*LMLHVCKMHTLSFNCSPCILCTSSSF*GSILHGAR 2394
Score = 182 bits (391), Expect(2) = 5e-051
Identities = 84/173 (48%), Positives = 96/173 (55%)
Frame = +1 / -3
Query: 391 PQIRCHLYLAPCKTELGRLPDEHSMQEERLILSVCTWHTCNTSCW*EFATHQP*ICSHPT 570
P C + LAPC+ E +L D H+MQ E+L LSVC HTCN S W E H * CSHP
Sbjct: 2417 PLSHCLMSLAPCRIEP*KLLDVHNMQGEQLKLSVCILHTCNISYWSEIEVHLQ*SCSHPK 2238
Query: 571 EHDNGQDGLFPECQHGCTGRNQTRLDGKSLSPPQCPAVCCHFYRQHADHCDY*QTTWCDD 750
E N Q PE QH G++QT G+ SP QC HF + DHC QT CDD
Sbjct: 2237 ERGNEQVEKCPEYQHDYRGKSQTL*GGRF*SPQQCQVKYSHFCPPNGDHCGSEQTASCDD 2058
Query: 751 ASGPRQK*LEAGNQTPMMHRPF*WHQVRTTELGRTVPH*HHPCRI*SSWVFVQ 909
AS P Q L N P HRP WHQV +LG+ VPH* HPCR *S V+ Q
Sbjct: 2057 ASAPPQMSLVVDNLLPAKHRPCGWHQVHRAKLGKIVPH*LHPCRR*SLVVYAQ 1899
Score = 161 bits (347), Expect(2) = 8e-040
Identities = 87/174 (50%), Positives = 96/174 (55%)
Frame = -3 / +3
Query: 912 RLDKNPRGSYSTGMVSVRDSSTKFCCTNLMPLERPVHHWSLITSLQLLLSWSRSVITPGC 733
+L N GS STGM SVRD+ TKFC NLMP RPV W + + Q L W RSVIT GC
Sbjct: 1896 QLGINH*GSSSTGMESVRDNFTKFCSMNLMPSARPVLRWKQVINHQ*HLWWCRSVITRGC 2075
Query: 732 LLIITMISVLPIEVATYCRALWWTQRFAIQPSLISTCAAMLAFREQAVLPIIMFCGMRTN 553
LL TMI++ EV + AL WT + A SL T ML FR L I F GMRT
Sbjct: 2076 LLRTTMIAIRWTEVGIFYLALLWTLKSATLQSLTFTSVVMLVFRALLDLLITTFFGMRTT 2255
Query: 552 LRLMGCKLSPTTCVTRMPGAHAQYQSFLLHTMLIWQPSELGFTWSQIQVTADLW 391
L M L P T VTRM AHAQ+Q F LH M I Q L TWSQ T W
Sbjct: 2256 LLQMDFNL*PITYVTRMQDAHAQFQLFPLHIMHI*QLLGLDSTWSQRHQTVAQW 2417
Score = 145 bits (312), Expect(3) = 1e-059
Identities = 73/111 (65%), Positives = 79/111 (71%)
Frame = +3 / -2
Query: 354 PGGGPRLVVAPLATDPLSLVSGSM*NXXXXXXXXXXXXGGTIDTERVHLAYV*HKLLVRV 533
P P + PLA +PLS VSGSM*N GGTI+TERVHLAYV*HKLLVR
Sbjct: 2454 PAIPPPRAMLPLAIEPLSDVSGSM*NRALKAARCA*YAGGTIETERVHLAYV*HKLLVRD 2275
Query: 534 CNPSAVNLFSSHRT**WAGRLVP*MPAWLHR*KSNSVGWQIFESTTVPGSM 686
+PSAV LFSS RT * AGR VP*+PA L R*KSNSVGWQI ESTTVPG +
Sbjct: 2274 *SPSAVKLFSSQRTW**AGREVP*IPA*LQR*KSNSVGWQILESTTVPGKI 2122
Score = 94.5 bits (200), Expect(3) = 1e-059
Identities = 45/63 (71%), Positives = 50/63 (79%)
Frame = +3 / -2
Query: 741 V**RFWTTTKVTGGW*SDSNDAQAFLMASSSYNRTW*NCPSLTPSL*NMILLGFCPVALQ 920
V**RF TTT VTGG * S++AQA MASSS ++TW*NCPSLTPSL* MIL G CPV L+
Sbjct: 2067 V**RFCTTTNVTGG**PASSEAQALRMASSS*SKTW*NCPSLTPSL*KMILSGLCPVDLR 1888
Query: 921 KEM 929
K M
Sbjct: 1887 KAM 1879
Score = 60.6 bits (126), Expect(3) = 5e-065
Identities = 26/43 (60%), Positives = 30/43 (69%)
Frame = -2 / +2
Query: 388 SGATTSRGPPPGARNTRAGAANVAVRPLPALKENVKRVMFYC* 260
+ + +RG R+TR N AVRPLPALKENVKRVMFYC*
Sbjct: 2417 ASGSMARGGGMAGRSTRGPNVNAAVRPLPALKENVKRVMFYC* 2545
Score = 42.3 bits (86), Expect(2) = 5e-051
Identities = 21/39 (53%), Positives = 24/39 (61%)
Frame = +3 / -2
Query: 264 Q*NMTRFTFSLRAGNGLTATFAAPALVLRAPGGGPRLVV 380
Q*NMTRFTFS RAG+GLTA VL PR ++
Sbjct: 2541 Q*NMTRFTFSFRAGSGLTAALTLGPRVLLPAIPPPRAML 2425
Score = 31.8 bits (63), Expect(3) = 1e-059
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2 / -1
Query: 266 VEHDALHVFLEGR*WPHSNI 325
VEHD LH+ + WPH +I
Sbjct: 2539 VEHDTLHILFQSWEWPHCSI 2480
Score = 29.9 bits (59), Expect(3) = 5e-065
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = -1 / +2
Query: 977 DPQRGTVSGGMIRE 936
DPQ+G V+GGMI+E
Sbjct: 1832 DPQKGVVTGGMIKE 1873
Score = 26.3 bits (51), Expect(2) = e-117
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -3 / +3
Query: 333 VLQMLL*GHYLPSRKT*SASCSTAKI 256
++ ML *GH ++ *S SCSTA++
Sbjct: 2472 LMSMLQ*GHSQL*KRM*SVSCSTAEL 2549
Score = 24.9 bits (48), Expect(2) = 8e-040
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1 / +1
Query: 329 CKCCCEAITCPQGKREARHV 270
C+CC EA + + EA HV
Sbjct: 2476 CQCCSEATPSSERECEACHV 2535
>gb|CK119358.1|CK119358 212p13.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011P13212
5-PRIME, mRNA sequence
Length = 775
Score = 397 bits (861), Expect(2) = e-110
Identities = 159/179 (88%), Positives = 166/179 (92%)
Frame = -2 / +3
Query: 889 IIFYRDGVSEGQFYQVLLYELDAIRKACASLESDYQPPVTFVVVQKRHHTRLFVNNHNDQ 710
IIFYRDGVSEGQFYQVLLYELDAIRKACASLE+ YQPPVTFVVVQKRHHTRLF NHND+
Sbjct: 3 IIFYRDGVSEGQFYQVLLYELDAIRKACASLEAGYQPPVTFVVVQKRHHTRLFAQNHNDR 182
Query: 709 RAADRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQT 530
+ DRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDEN FTADGLQ+
Sbjct: 183 HSVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQS 362
Query: 529 LTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGATTSRGPPPG 353
LTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEP+TSDSGS+ASG+ G G
Sbjct: 363 LTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMASGSMARGGGMAG 539
Score = 201 bits (434), Expect(2) = 9e-054
Identities = 90/184 (48%), Positives = 125/184 (67%)
Frame = +2 / -3
Query: 338 PGVARPWWRATACRSTARHRSAVTCIWLHVKPSSEGCQMSIVCRRND*Y*ACAPGIRVTQ 517
P A + C + H + V C+WLHV+ S + C M I+CR N+* *ACA IRVT
Sbjct: 554 PACASTSHSTSTCHAPTSH*ATV*CLWLHVESSPKSC*MCIICRGNN*N*ACASCIRVT* 375
Query: 518 VVGESLQPISRKFVLIPQNMIMGRTACSLNASMAAQVEIKLGWMANL*VHHSARQYVATS 697
V+G+ L+ I K VLIP+N++M R+ +LN SM +V++KL +A+ VH+SAR + TS
Sbjct: 374 VIGQRLKSICSKVVLIPKNVVMSRSRSALNTSMTTEVKVKLCRVADFRVHNSAR*NIPTS 195
Query: 698 IGSTLIIVIINKQPGVMTLLDHDKSNWRLVIRLQ*CTGLSNGIKFVQQNLVELSLTDTIP 877
+ IIV+++KQP VMTLL H K +W L+ Q TGL++GIKF++QNLV+LSLTD+IP
Sbjct: 194 VHRMAIIVVLSKQPRVMTLLHHHKCHWWLITCFQRSTGLADGIKFIEQNLVKLSLTDSIP 15
Query: 878 VEYD 889
VE D
Sbjct: 14 VEDD 3
Score = 193 bits (416), Expect(2) = 6e-060
Identities = 86/159 (54%), Positives = 107/159 (67%)
Frame = -1 / +2
Query: 890 DHILQGWCQ*GTVLPSSVVRT*CH*KGLCIIGV*LPASSYFCRGPEASSHQVVC**SQ*S 711
DH+LQGW Q*GT+LPS + T*CH +GLC G L +S C G EASSH+ VC Q*S
Sbjct: 2 DHLLQGWSQ*GTILPSFAL*T*CHPQGLCFAGSRLSTTSDICGGAEASSHEAVCSEPQ*S 181
Query: 710 ACCR*KWQHTAGHCGGLKDLPSNRV*FLPVQPCWHSGNKPSCPLSCSVG*EQIYG*WVAN 531
KW++ HC GL +LP RV* LP+ CW+SG+ +C L S+G*EQ+Y W +
Sbjct: 182 PFGGQKWEYFTWHCCGL*NLPPYRV*LLPL*SCWYSGHFSTCSLPRSLG*EQLYCRWTSI 361
Query: 530 SHQQLVLHVCQVHTLSINRSSCILCSSGSLPSSVLHGAR 414
S Q L+LHVC++HTLS N S CILC+S S S+LHGAR
Sbjct: 362 SDQ*LMLHVCKMHTLSFNCSPCILCTSSSF*GSILHGAR 478
Score = 178 bits (384), Expect(2) = 5e-050
Identities = 82/167 (49%), Positives = 93/167 (55%)
Frame = +1 / -2
Query: 391 PQIRCHLYLAPCKTELGRLPDEHSMQEERLILSVCTWHTCNTSCW*EFATHQP*ICSHPT 570
P C + LAPC+ E +L D H+MQ E+L LSVC HTCN S W E H * CSHP
Sbjct: 501 PLSHCLMSLAPCRIEP*KLLDVHNMQGEQLKLSVCILHTCNISYWSEIEVHLQ*SCSHPK 322
Query: 571 EHDNGQDGLFPECQHGCTGRNQTRLDGKSLSPPQCPAVCCHFYRQHADHCDY*QTTWCDD 750
E N Q PE QH G++QT G+ SP QC HF + DHC QT CDD
Sbjct: 321 ERGNEQVEKCPEYQHDYRGKSQTL*GGRF*SPQQCQVKYSHFCPPNGDHCGSEQTASCDD 142
Query: 751 ASGPRQK*LEAGNQTPMMHRPF*WHQVRTTELGRTVPH*HHPCRI*S 891
AS P Q L N P HRP WHQV +LG+ VPH* HPCR *S
Sbjct: 141 ASAPPQMSLVVDNLLPAKHRPCGWHQVHRAKLGKIVPH*LHPCRR*S 1
Score = 161 bits (346), Expect(2) = 1e-039
Identities = 85/167 (50%), Positives = 93/167 (55%)
Frame = -3 / +1
Query: 891 GSYSTGMVSVRDSSTKFCCTNLMPLERPVHHWSLITSLQLLLSWSRSVITPGCLLIITMI 712
GS STGM SVRD+ TKFC NLMP RPV W + + Q L W RSVIT GCLL TMI
Sbjct: 1 GSSSTGMESVRDNFTKFCSMNLMPSARPVLRWKQVINHQ*HLWWCRSVITRGCLLRTTMI 180
Query: 711 SVLPIEVATYCRALWWTQRFAIQPSLISTCAAMLAFREQAVLPIIMFCGMRTNLRLMGCK 532
++ EV + AL WT + A SL T ML FR L I F GMRT L M
Sbjct: 181 AIRWTEVGIFYLALLWTLKSATLQSLTFTSVVMLVFRALLDLLITTFFGMRTTLLQMDFN 360
Query: 531 LSPTTCVTRMPGAHAQYQSFLLHTMLIWQPSELGFTWSQIQVTADLW 391
L P T VTRM AHAQ+Q F LH M I Q L TWSQ T W
Sbjct: 361 L*PITYVTRMQDAHAQFQLFPLHIMHI*QLLGLDSTWSQRHQTVAQW 501
Score = 145 bits (312), Expect(2) = 2e-050
Identities = 73/111 (65%), Positives = 79/111 (71%)
Frame = +3 / -1
Query: 354 PGGGPRLVVAPLATDPLSLVSGSM*NXXXXXXXXXXXXGGTIDTERVHLAYV*HKLLVRV 533
P P + PLA +PLS VSGSM*N GGTI+TERVHLAYV*HKLLVR
Sbjct: 538 PAIPPPRAMLPLAIEPLSDVSGSM*NRALKAARCA*YAGGTIETERVHLAYV*HKLLVRD 359
Query: 534 CNPSAVNLFSSHRT**WAGRLVP*MPAWLHR*KSNSVGWQIFESTTVPGSM 686
+PSAV LFSS RT * AGR VP*+PA L R*KSNSVGWQI ESTTVPG +
Sbjct: 358 *SPSAVKLFSSQRTW**AGREVP*IPA*LQR*KSNSVGWQILESTTVPGKI 206
Score = 76.2 bits (160), Expect(2) = 2e-050
Identities = 37/50 (74%), Positives = 41/50 (82%)
Frame = +3 / -1
Query: 741 V**RFWTTTKVTGGW*SDSNDAQAFLMASSSYNRTW*NCPSLTPSL*NMI 890
V**RF TTT VTGG * S++AQA MASSS ++TW*NCPSLTPSL* MI
Sbjct: 151 V**RFCTTTNVTGG**PASSEAQALRMASSS*SKTW*NCPSLTPSL*KMI 2
Score = 60.6 bits (126), Expect(2) = 6e-060
Identities = 26/43 (60%), Positives = 30/43 (69%)
Frame = -2 / +3
Query: 388 SGATTSRGPPPGARNTRAGAANVAVRPLPALKENVKRVMFYC* 260
+ + +RG R+TR N AVRPLPALKENVKRVMFYC*
Sbjct: 501 ASGSMARGGGMAGRSTRGPNVNAAVRPLPALKENVKRVMFYC* 629
Score = 42.3 bits (86), Expect(2) = 5e-050
Identities = 21/39 (53%), Positives = 24/39 (61%)
Frame = +3 / -1
Query: 264 Q*NMTRFTFSLRAGNGLTATFAAPALVLRAPGGGPRLVV 380
Q*NMTRFTFS RAG+GLTA VL PR ++
Sbjct: 625 Q*NMTRFTFSFRAGSGLTAALTLGPRVLLPAIPPPRAML 509
Score = 31.8 bits (63), Expect(2) = 9e-054
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2 / -3
Query: 266 VEHDALHVFLEGR*WPHSNI 325
VEHD LH+ + WPH +I
Sbjct: 623 VEHDTLHILFQSWEWPHCSI 564
Score = 26.3 bits (51), Expect(2) = e-110
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -3 / +1
Query: 333 VLQMLL*GHYLPSRKT*SASCSTAKI 256
++ ML *GH ++ *S SCSTA++
Sbjct: 556 LMSMLQ*GHSQL*KRM*SVSCSTAEL 633
Score = 24.9 bits (48), Expect(2) = 1e-039
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1 / +2
Query: 329 CKCCCEAITCPQGKREARHV 270
C+CC EA + + EA HV
Sbjct: 560 CQCCSEATPSSERECEACHV 619
>emb|BX815116.1|CNS0AAU5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS34ZG07 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 3188
Score = 259 bits (561), Expect(4) = e-107
Identities = 103/116 (88%), Positives = 107/116 (92%)
Frame = -2 / +3
Query: 700 DRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTN 521
DRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDEN FTADGLQ+LTN
Sbjct: 2586 DRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTN 2765
Query: 520 NLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGATTSRGPPPG 353
NLCYTYARCTRSVSIVPPAYYAHLAA RARFYMEP+TSDSGS+ASG+ G G
Sbjct: 2766 NLCYTYARCTRSVSIVPPAYYAHLAALRARFYMEPETSDSGSMASGSMARGGGMAG 2933
Score = 145 bits (312), Expect(4) = 9e-059
Identities = 73/111 (65%), Positives = 79/111 (71%)
Frame = +3 / -2
Query: 354 PGGGPRLVVAPLATDPLSLVSGSM*NXXXXXXXXXXXXGGTIDTERVHLAYV*HKLLVRV 533
P P + PLA +PLS VSGSM*N GGTI+TERVHLAYV*HKLLVR
Sbjct: 2932 PAIPPPRAMLPLAIEPLSDVSGSM*NRALRAARCA*YAGGTIETERVHLAYV*HKLLVRD 2753
Query: 534 CNPSAVNLFSSHRT**WAGRLVP*MPAWLHR*KSNSVGWQIFESTTVPGSM 686
+PSAV LFSS RT * AGR VP*+PA L R*KSNSVGWQI ESTTVPG +
Sbjct: 2752 *SPSAVKLFSSQRTW**AGREVP*IPA*LQR*KSNSVGWQILESTTVPGKI 2600
Score = 122 bits (262), Expect(5) = 9e-060
Identities = 52/97 (53%), Positives = 67/97 (69%)
Frame = -1 / +2
Query: 704 CR*KWQHTAGHCGGLKDLPSNRV*FLPVQPCWHSGNKPSCPLSCSVG*EQIYG*WVANSH 525
C KW++ HC GL +LP RV* LP+ CW+SG+ +C L S+G*EQ+Y W + S
Sbjct: 2582 CGQKWEYFTWHCCGL*NLPPYRV*LLPL*SCWYSGHFSTCSLPRSLG*EQLYCRWTSISD 2761
Query: 524 QQLVLHVCQVHTLSINRSSCILCSSGSLPSSVLHGAR 414
Q L+LHVC++HTLS N S CILC+S S S+LHGAR
Sbjct: 2762 Q*LMLHVCKMHTLSFNCSPCILCTSSSS*GSILHGAR 2872
Score = 118 bits (252), Expect(3) = 1e-037
Identities = 53/121 (43%), Positives = 77/121 (63%)
Frame = +2 / -1
Query: 338 PGVARPWWRATACRSTARHRSAVTCIWLHVKPSSEGCQMSIVCRRND*Y*ACAPGIRVTQ 517
P A + C + H + V C+WLHV+ S + C M I+CR N+* *ACA IRVT
Sbjct: 2948 PACASTSHSTSTCHAPTSH*ATV*CLWLHVESSPKSC*MCIICRGNN*N*ACASCIRVT* 2769
Query: 518 VVGESLQPISRKFVLIPQNMIMGRTACSLNASMAAQVEIKLGWMANL*VHHSARQYVATS 697
V+G+ L+ I K VLIP+N++M R+ +LN SM +V++KL +A+ VH+SAR + TS
Sbjct: 2768 VIGQRLKSICSKVVLIPKNVVMSRSRSALNTSMTTEVKVKLCRVADFRVHNSAR*NIPTS 2589
Query: 698 I 700
+
Sbjct: 2588 V 2586
Score = 103 bits (219), Expect(4) = 5e-045
Identities = 48/102 (47%), Positives = 55/102 (53%)
Frame = +1 / -3
Query: 391 PQIRCHLYLAPCKTELGRLPDEHSMQEERLILSVCTWHTCNTSCW*EFATHQP*ICSHPT 570
P C + LAPC+ E L D H+MQ E+L LSVC HTCN S W E H * CSHP
Sbjct: 2895 PLSHCLMSLAPCRIEP*ELLDVHNMQGEQLKLSVCILHTCNISYWSEIEVHLQ*SCSHPK 2716
Query: 571 EHDNGQDGLFPECQHGCTGRNQTRLDGKSLSPPQCPAVCCHF 696
E N Q PE QH G++QT G+ SP QC HF
Sbjct: 2715 ERGNEQVEKCPEYQHDYRGKSQTL*GGRF*SPQQCQVKYSHF 2590
Score = 94.1 bits (199), Expect(4) = e-107
Identities = 41/56 (73%), Positives = 45/56 (80%)
Frame = -2 / +2
Query: 973 PKGGLSLVA*LGNLLISFWRATGQKPKRIIFYRDGVSEGQFYQVLLYELDAIRKAC 806
P+ GL + LLI+F R+TG KP RIIFYRDGVSEGQFYQVLLYELDAIRKAC
Sbjct: 2312 PQKGLLTGGMIKELLIAFRRSTGHKPLRIIFYRDGVSEGQFYQVLLYELDAIRKAC 2479
Score = 84.9 bits (179), Expect(4) = 3e-030
Identities = 48/102 (47%), Positives = 51/102 (50%)
Frame = -3 / +1
Query: 696 EVATYCRALWWTQRFAIQPSLISTCAAMLAFREQAVLPIIMFCGMRTNLRLMGCKLSPTT 517
EV + AL WT + A SL T ML FR L I F GMRT L M L P T
Sbjct: 2590 EVGIFYLALLWTLKSATLQSLTFTSVVMLVFRALLDLLITTFFGMRTTLLQMDFNL*PIT 2769
Query: 516 CVTRMPGAHAQYQSFLLHTMLIWQPSELGFTWSQIQVTADLW 391
VTRM AHAQ+Q F LH M I Q L TWSQ T W
Sbjct: 2770 YVTRMQDAHAQFQLFPLHIMHI*QLLGLDSTWSQRHQTVAQW 2895
Score = 68.9 bits (144), Expect(4) = e-107
Identities = 26/31 (83%), Positives = 28/31 (90%)
Frame = -2 / +1
Query: 802 SLESDYQPPVTFVVVQKRHHTRLFVNNHNDQ 710
SLE+ YQPPVTFVVVQKRHHTRLF NHND+
Sbjct: 2482 SLEAGYQPPVTFVVVQKRHHTRLFAQNHNDR 2574
Score = 68.9 bits (144), Expect(4) = 9e-059
Identities = 30/41 (73%), Positives = 33/41 (80%)
Frame = +3 / -3
Query: 807 QAFLMASSSYNRTW*NCPSLTPSL*NMILLGFCPVALQKEM 929
QA MASSS ++TW*NCPSLTPSL* MIL G CPV L+K M
Sbjct: 2478 QALRMASSS*SKTW*NCPSLTPSL*KMILSGLCPVDLRKAM 2356
Score = 60.6 bits (126), Expect(5) = 9e-060
Identities = 26/43 (60%), Positives = 30/43 (69%)
Frame = -2 / +3
Query: 388 SGATTSRGPPPGARNTRAGAANVAVRPLPALKENVKRVMFYC* 260
+ + +RG R+TR N AVRPLPALKENVKRVMFYC*
Sbjct: 2895 ASGSMARGGGMAGRSTRGPNVNAAVRPLPALKENVKRVMFYC* 3023
Score = 59.7 bits (124), Expect(4) = 5e-045
Identities = 26/44 (59%), Positives = 35/44 (79%)
Frame = +2 / -2
Query: 806 TGLSNGIKFVQQNLVELSLTDTIPVEYDPLGFLSSRPPERNEKV 937
TGL++GIKF++QNLV+LSLTD+IPVE DP F+ S E E++
Sbjct: 2479 TGLADGIKFIEQNLVKLSLTDSIPVEDDP*WFMPS*STEGYEQL 2348
Score = 59.3 bits (123), Expect(5) = 9e-060
Identities = 22/36 (61%), Positives = 28/36 (77%)
Frame = -1 / +1
Query: 911 DWTKTQEDHILQGWCQ*GTVLPSSVVRT*CH*KGLC 804
+W T +DH+LQGW Q*GT+LPS + T*CH +GLC
Sbjct: 2374 NWA*TTKDHLLQGWSQ*GTILPSFAL*T*CHPQGLC 2481
Score = 52.4 bits (108), Expect(3) = 1e-037
Identities = 21/35 (60%), Positives = 24/35 (68%)
Frame = +1 / -1
Query: 805 HRPF*WHQVRTTELGRTVPH*HHPCRI*SSWVFVQ 909
HRP WHQV +LG+ VPH* HPCR *S V+ Q
Sbjct: 2480 HRPCGWHQVHRAKLGKIVPH*LHPCRR*SLVVYAQ 2376
Score = 50.6 bits (104), Expect(4) = 3e-030
Identities = 24/44 (54%), Positives = 29/44 (65%)
Frame = -3 / +3
Query: 912 RLDKNPRGSYSTGMVSVRDSSTKFCCTNLMPLERPVHHWSLITS 781
+L N GS STGM SVRD+ TKFC NLMP RPV S +++
Sbjct: 2373 QLGINH*GSSSTGMESVRDNFTKFCSMNLMPSARPVFAGSRLST 2504
Score = 42.3 bits (86), Expect(4) = 5e-045
Identities = 21/39 (53%), Positives = 24/39 (61%)
Frame = +3 / -2
Query: 264 Q*NMTRFTFSLRAGNGLTATFAAPALVLRAPGGGPRLVV 380
Q*NMTRFTFS RAG+GLTA VL PR ++
Sbjct: 3019 Q*NMTRFTFSFRAGSGLTAALTLGPRVLLPAIPPPRAML 2903
Score = 40.5 bits (82), Expect(4) = 9e-059
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +2 / -3
Query: 713 IIVIINKQPGVMTLLDHDKSNWRLVIRLQ 799
IIV+++KQP VMTLL H K +W L+ Q
Sbjct: 2571 IIVVLSKQPRVMTLLHHHKCHWWLITCFQ 2485
Score = 37.3 bits (75), Expect(5) = 9e-060
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = -3 / +2
Query: 798 WSLITSLQLLLSWSRSVITPGCLLIITMISV 706
W + + Q L W RSVIT GCLL TMI++
Sbjct: 2486 WKQVINHQ*HLWWCRSVITRGCLLRTTMIAI 2578
Score = 35.0 bits (70), Expect(4) = 5e-045
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +1 / -2
Query: 703 QHADHCDY*QTTWCDDASGPRQK*LEAGNQTP 798
++ DHC QT CDDAS P Q L N P
Sbjct: 2581 RNGDHCGSEQTASCDDASAPPQMSLVVDNLLP 2486
Score = 31.8 bits (63), Expect(4) = 9e-059
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2 / -1
Query: 266 VEHDALHVFLEGR*WPHSNI 325
VEHD LH+ + WPH +I
Sbjct: 3017 VEHDTLHILFQSWEWPHCSI 2958
Score = 29.5 bits (58), Expect(4) = 3e-030
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = -1 / +3
Query: 788 LPASSYFCRGPEASSHQVVC**SQ*S 711
L +S C G EASSH+ VC Q*S
Sbjct: 2496 LSTTSDICGGAEASSHEAVCSEPQ*S 2573
Score = 28.1 bits (55), Expect(5) = 9e-060
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = -1 / +2
Query: 977 DPQRGTVSGGMIRE 936
DPQ+G ++GGMI+E
Sbjct: 2309 DPQKGLLTGGMIKE 2350
Score = 26.7 bits (52), Expect(3) = 1e-037
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +3 / -1
Query: 741 V**RFWTTTKVTGGW*SDSND 803
V**RF TTT VTGG * S++
Sbjct: 2543 V**RFCTTTNVTGG**PASSE 2481
Score = 26.3 bits (51), Expect(4) = e-107
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -3 / +1
Query: 333 VLQMLL*GHYLPSRKT*SASCSTAKI 256
++ ML *GH ++ *S SCSTA++
Sbjct: 2950 LMSMLQ*GHSQL*KRM*SVSCSTAEL 3027
Score = 24.9 bits (48), Expect(4) = 3e-030
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1 / +2
Query: 329 CKCCCEAITCPQGKREARHV 270
C+CC EA + + EA HV
Sbjct: 2954 CQCCSEATPSSERECEACHV 3013
>dbj|AB026651.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQD19
Length = 87286
Score = 105 bits (224), Expect(8) = e-100
Identities = 41/50 (82%), Positives = 44/50 (88%)
Frame = -2 / +1
Query: 625 LCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCYTYARCTRSVSI 476
+C I GTSRPAHYHVLWDEN FTADG+Q+LTNNLCYTYARCTRSVSI
Sbjct: 71023 VCVCCMI*GTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSI 71172
Score = 98.7 bits (209), Expect(8) = e-100
Identities = 37/46 (80%), Positives = 41/46 (89%)
Frame = -2 / +2
Query: 811 ACASLESDYQPPVTFVVVQKRHHTRLFVNNHNDQRAADRSGNILPG 674
ACASLE +YQPPVTF+VVQKRHHTRLF NNH D+ + DRSGNILPG
Sbjct: 70658 ACASLEPNYQPPVTFIVVQKRHHTRLFANNHRDKNSTDRSGNILPG 70795
Score = 66.1 bits (138), Expect(8) = e-100
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = -2 / +2
Query: 676 GTVVDSKICHPTEFDFYLCSHAGIQ 602
GTVVD+KICHPTEFDFYLCSHAGIQ
Sbjct: 70880 GTVVDTKICHPTEFDFYLCSHAGIQ 70954
Score = 52.8 bits (109), Expect(8) = e-100
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = -2 / +3
Query: 475 VPPAYYAHLAAFRARFYMEPD 413
VPPAYYAHLAAFRARFY+EP+
Sbjct: 71268 VPPAYYAHLAAFRARFYLEPE 71330
Score = 52.8 bits (109), Expect(5) = 2e-026
Identities = 29/44 (65%), Positives = 33/44 (75%)
Frame = +3 / -3
Query: 477 IDTERVHLAYV*HKLLVRVCNPSAVNLFSSHRT**WAGRLVP*M 608
I+T+RVH A V* +LLVR PSAV LFSS RT * AG LVP*+
Sbjct: 71171 IETDRVHRA*V*QRLLVRD*IPSAVKLFSSQRTW*CAGLLVP*I 71040
Score = 51.5 bits (106), Expect(8) = e-100
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -2 / +2
Query: 874 DGVSEGQFYQVLLYELDAIRK 812
DGVSEGQFYQVLLYELDAIRK
Sbjct: 70505 DGVSEGQFYQVLLYELDAIRK 70567
Score = 49.6 bits (102), Expect(8) = e-100
Identities = 21/36 (58%), Positives = 23/36 (63%)
Frame = -2 / +3
Query: 367 GPPPGARNTRAGAANVAVRPLPALKENVKRVMFYC* 260
G P +V V+PLPALKENVKRVMFYC*
Sbjct: 71346 GSPGKKNTKTTTVGDVGVKPLPALKENVKRVMFYC* 71453
Score = 42.3 bits (86), Expect(5) = 2e-026
Identities = 19/25 (76%), Positives = 20/25 (80%)
Frame = +3 / -2
Query: 603 *MPAWLHR*KSNSVGWQIFESTTVP 677
*+PAWL R*KSNSVG I STTVP
Sbjct: 70953 *IPAWLQR*KSNSVG*HILVSTTVP 70879
Score = 41.8 bits (85), Expect(8) = e-100
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = -2 / +1
Query: 955 LVA*LGNLLISFWRATGQKPKRIIFYR 875
L+A +LLISF +ATGQKP RIIFYR
Sbjct: 70342 LLAFYRDLLISFRKATGQKPLRIIFYR 70422
Score = 37.3 bits (75), Expect(5) = 2e-026
Identities = 16/44 (36%), Positives = 29/44 (65%)
Frame = +2 / -1
Query: 686 VATSIGSTLIIVIINKQPGVMTLLDHDKSNWRLVIRLQ*CTGLS 817
++ S+ + + VII+KQ V+TLL + + + L+IR + CT L+
Sbjct: 70783 ISASVSTVFVSVIISKQTSVVTLLYNYECHRWLIIRFKRCTSLN 70652
Score = 34.5 bits (69), Expect(5) = 2e-026
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +3 / -2
Query: 813 FLMASSSYNRTW*NCPSLTPSL 878
F +AS+S ++T *NCPSLTPSL
Sbjct: 70566 FRIASNS*SKT**NCPSLTPSL 70501
Score = 30.9 bits (61), Expect(8) = e-100
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = -1 / +3
Query: 977 DPQRGTVSGGMIR 939
DP RGTVSGGMIR
Sbjct: 70242 DPVRGTVSGGMIR 70280
Score = 26.7 bits (52), Expect(5) = 2e-026
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +3 / -3
Query: 879 *NMILLGFCPVALQKEMRR 935
* +I GFCPVA E+RR
Sbjct: 70418 *KIIRSGFCPVAFLNEIRR 70362
>gb|AF154272.1|AF154272 Arabidopsis thaliana PINHEAD (PINHEAD) gene, complete cds
Length = 5895
Score = 105 bits (224), Expect(8) = e-100
Identities = 41/50 (82%), Positives = 44/50 (88%)
Frame = -2 / +2
Query: 625 LCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCYTYARCTRSVSI 476
+C I GTSRPAHYHVLWDEN FTADG+Q+LTNNLCYTYARCTRSVSI
Sbjct: 5234 VCVCCMI*GTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSI 5383
Score = 98.7 bits (209), Expect(8) = e-100
Identities = 37/46 (80%), Positives = 41/46 (89%)
Frame = -2 / +2
Query: 811 ACASLESDYQPPVTFVVVQKRHHTRLFVNNHNDQRAADRSGNILPG 674
ACASLE +YQPPVTF+VVQKRHHTRLF NNH D+ + DRSGNILPG
Sbjct: 4868 ACASLEPNYQPPVTFIVVQKRHHTRLFANNHRDKNSTDRSGNILPG 5005
Score = 66.1 bits (138), Expect(8) = e-100
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = -2 / +2
Query: 676 GTVVDSKICHPTEFDFYLCSHAGIQ 602
GTVVD+KICHPTEFDFYLCSHAGIQ
Sbjct: 5090 GTVVDTKICHPTEFDFYLCSHAGIQ 5164
Score = 52.8 bits (109), Expect(8) = e-100
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = -2 / +1
Query: 475 VPPAYYAHLAAFRARFYMEPD 413
VPPAYYAHLAAFRARFY+EP+
Sbjct: 5479 VPPAYYAHLAAFRARFYLEPE 5541
Score = 52.8 bits (109), Expect(5) = 2e-026
Identities = 29/44 (65%), Positives = 33/44 (75%)
Frame = +3 / -1
Query: 477 IDTERVHLAYV*HKLLVRVCNPSAVNLFSSHRT**WAGRLVP*M 608
I+T+RVH A V* +LLVR PSAV LFSS RT * AG LVP*+
Sbjct: 5382 IETDRVHRA*V*QRLLVRD*IPSAVKLFSSQRTW*CAGLLVP*I 5251
Score = 51.5 bits (106), Expect(8) = e-100
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -2 / +2
Query: 874 DGVSEGQFYQVLLYELDAIRK 812
DGVSEGQFYQVLLYELDAIRK
Sbjct: 4715 DGVSEGQFYQVLLYELDAIRK 4777
Score = 49.6 bits (102), Expect(8) = e-100
Identities = 21/36 (58%), Positives = 23/36 (63%)
Frame = -2 / +1
Query: 367 GPPPGARNTRAGAANVAVRPLPALKENVKRVMFYC* 260
G P +V V+PLPALKENVKRVMFYC*
Sbjct: 5557 GSPGKKNTKTTTVGDVGVKPLPALKENVKRVMFYC* 5664
Score = 42.3 bits (86), Expect(5) = 2e-026
Identities = 19/25 (76%), Positives = 20/25 (80%)
Frame = +3 / -1
Query: 603 *MPAWLHR*KSNSVGWQIFESTTVP 677
*+PAWL R*KSNSVG I STTVP
Sbjct: 5163 *IPAWLQR*KSNSVG*HILVSTTVP 5089
Score = 41.8 bits (85), Expect(8) = e-100
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = -2 / +1
Query: 955 LVA*LGNLLISFWRATGQKPKRIIFYR 875
L+A +LLISF +ATGQKP RIIFYR
Sbjct: 4552 LLAFYRDLLISFRKATGQKPLRIIFYR 4632
Score = 37.3 bits (75), Expect(5) = 2e-026
Identities = 16/44 (36%), Positives = 29/44 (65%)
Frame = +2 / -3
Query: 686 VATSIGSTLIIVIINKQPGVMTLLDHDKSNWRLVIRLQ*CTGLS 817
++ S+ + + VII+KQ V+TLL + + + L+IR + CT L+
Sbjct: 4993 ISASVSTVFVSVIISKQTSVVTLLYNYECHRWLIIRFKRCTSLN 4862
Score = 34.5 bits (69), Expect(5) = 2e-026
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +3 / -1
Query: 813 FLMASSSYNRTW*NCPSLTPSL 878
F +AS+S ++T *NCPSLTPSL
Sbjct: 4776 FRIASNS*SKT**NCPSLTPSL 4711
Score = 30.9 bits (61), Expect(8) = e-100
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = -1 / +3
Query: 977 DPQRGTVSGGMIR 939
DP RGTVSGGMIR
Sbjct: 4452 DPVRGTVSGGMIR 4490
Score = 26.7 bits (52), Expect(5) = 2e-026
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +3 / -2
Query: 879 *NMILLGFCPVALQKEMRR 935
* +I GFCPVA E+RR
Sbjct: 4628 *KIIRSGFCPVAFLNEIRR 4572
>gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom arm complete sequence
Length = 14668883
Score = 188 bits (404), Expect(3) = 4e-062
Identities = 70/111 (63%), Positives = 86/111 (77%)
Frame = -2 / -3
Query: 688 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCY 509
NI PGTVVD+ I HP EFDFYLCSH G++GTSRP HYH+LWDEN+FT+D LQ L NLCY
Sbjct: 10344153 NIPPGTVVDTVITHPKEFDFYLCSHLGVKGTSRPTHYHILWDENEFTSDELQRLVYNLCY 10343974
Query: 508 TYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGATTSRGPPP 356
T+ RCT+ +SIVPPAYYAHLAA+R R Y+E + +G + ++ SR PP
Sbjct: 10343973 TFVRCTKPISIVPPAYYAHLAAYRGRLYIERSSESNGGSMNPSSVSRVGPP 10343821
Score = 99.6 bits (211), Expect(9) = 6e-098
Identities = 38/47 (80%), Positives = 42/47 (89%)
Frame = -2 / -1
Query: 814 KACASLESDYQPPVTFVVVQKRHHTRLFVNNHNDQRAADRSGNILPG 674
+ACASLE+ YQPPVTFVVVQKRHHTRLF NHND+ + DRSGNILPG
Sbjct: 2246477 QACASLEAGYQPPVTFVVVQKRHHTRLFAQNHNDRHSVDRSGNILPG 2246337
Score = 93.2 bits (197), Expect(2) = 4e-023
Identities = 46/73 (63%), Positives = 47/73 (64%)
Frame = +3 / +2
Query: 468 GGTIDTERVHLAYV*HKLLVRVCNPSAVNLFSSHRT**WAGRLVP*MPAWLHR*KSNSVG 647
GGTID VHL V*HKL +CN S VN FSSHR * G LVP P WL R*KSNS G
Sbjct: 10343933 GGTIDIGFVHLTKV*HKLYTSLCNSSEVNSFSSHRIW*CVGLLVPFTPKWLQR*KSNSFG 10344112
Query: 648 WQIFESTTVPGSM 686
I STTVPG M
Sbjct: 10344113 *VITVSTTVPGGM 10344151
Score = 84.5 bits (178), Expect(9) = 6e-098
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = -2 / -1
Query: 604 QGTSRPAHYHVLWDENKFTADGLQTLTNNLCYT 506
QGTSRPAHYHVLWDEN FTADGLQ+LTNNLCYT
Sbjct: 2246093 QGTSRPAHYHVLWDENNFTADGLQSLTNNLCYT 2245995
Score = 77.6 bits (163), Expect(9) = 6e-098
Identities = 31/42 (73%), Positives = 35/42 (83%)
Frame = -2 / -2
Query: 478 IVPPAYYAHLAAFRARFYMEPDTSDSGSVASGATTSRGPPPG 353
+VPPAYYAHLAAFRARFYMEP+TSDSGS+ASG+ G G
Sbjct: 2245762 VVPPAYYAHLAAFRARFYMEPETSDSGSMASGSMARGGGMAG 2245637
Score = 68.4 bits (143), Expect(9) = 6e-098
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = -2 / -1
Query: 685 ILPGTVVDSKICHPTEFDFYLCSHAGIQ 602
++ GTVVDSKICHPTEFDFYLCSHAGIQ
Sbjct: 2246252 LIVGTVVDSKICHPTEFDFYLCSHAGIQ 2246169
Score = 58.3 bits (121), Expect(3) = 4e-062
Identities = 27/63 (42%), Positives = 38/63 (60%)
Frame = -2 / -3
Query: 934 LLISFWRATGQKPKRIIFYRDGVSEGQFYQVLLYELDAIRKACASLESDYQPPVTFVVVQ 755
LL F++A + P RIIF+RDGVSE QF +VL EL +I+ AC+ + VV +
Sbjct: 10344375 LLDDFYKAVKKLPNRIIFFRDGVSETQFKKVLQEELQSIKTACSKFQDYNPSITFAVVQK 10344196
Query: 754 KRH 746
+ H
Sbjct: 10344195 RHH 10344187
Score = 57.9 bits (120), Expect(9) = 6e-098
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = -2 / -2
Query: 889 IIFYRDGVSEGQFYQVLLYELDAIRK 812
+I +RDGVSEGQFYQVLLYELDAIRK
Sbjct: 2246635 VILHRDGVSEGQFYQVLLYELDAIRK 2246558
Score = 49.2 bits (101), Expect(5) = 7e-034
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +2 / +3
Query: 686 VATSIGSTLIIVIINKQPGVMTLLDHDKSNWRLVIRLQ*CTGL 814
+ TS+ IIV+++KQP VMTLL H K +W L+ Q TGL
Sbjct: 2246349 IPTSVHRMAIIVVLSKQPRVMTLLHHHKCHWWLITCFQRSTGL 2246477
Score = 48.7 bits (100), Expect(5) = 7e-034
Identities = 25/34 (73%), Positives = 27/34 (79%)
Frame = +3 / +1
Query: 501 AYV*HKLLVRVCNPSAVNLFSSHRT**WAGRLVP 602
+YV*HKLLVR +PSAV LFSS RT * AGR VP
Sbjct: 2245990 SYV*HKLLVRD*SPSAVKLFSSQRTW**AGREVP 2246091
Score = 47.8 bits (98), Expect(5) = 7e-034
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = +3 / +1
Query: 603 *MPAWLHR*KSNSVGWQIFESTTVP 677
*+PA L R*KSNSVGWQI ESTTVP
Sbjct: 2246170 *IPA*LQR*KSNSVGWQILESTTVP 2246244
Score = 45.5 bits (93), Expect(5) = 7e-034
Identities = 17/24 (70%), Positives = 24/24 (100%)
Frame = +2 / +2
Query: 812 LSNGIKFVQQNLVELSLTDTIPVE 883
L++GIKF++QNLV+LSLTD+IPV+
Sbjct: 2246558 LADGIKFIEQNLVKLSLTDSIPVQ 2246629
Score = 45.1 bits (92), Expect(4) = 2e-021
Identities = 21/44 (47%), Positives = 26/44 (59%)
Frame = -3 / -2
Query: 813 RPVHHWSLITSLQLLLSWSRSVITPGCLLIITMISVLPIEVATY 682
RPV W + + Q L W RSVIT GCLL TMI++ EV +
Sbjct: 2246476 RPVLRWKQVINHQ*HLWWCRSVITRGCLLRTTMIAIRWTEVGIF 2246345
Score = 40.0 bits (81), Expect(4) = 2e-021
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = -3 / -3
Query: 885 YSTGMVSVRDSSTKFCCTNLMPLER 811
+ TGM SVRD+ TKFC NLMP R
Sbjct: 2246631 FCTGMESVRDNFTKFCSMNLMPSAR 2246557
Score = 38.6 bits (78), Expect(4) = 2e-021
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = -1 / -3
Query: 674 HCGGLKDLPSNRV*FLPVQPCWHSG 600
HC GL +LP RV* LP+ CW+SG
Sbjct: 2246241 HCCGL*NLPPYRV*LLPL*SCWYSG 2246167
Score = 37.3 bits (75), Expect(2) = 4e-023
Identities = 23/45 (51%), Positives = 25/45 (55%)
Frame = +3 / +2
Query: 798 NDAQAFLMASSSYNRTW*NCPSLTPSL*NMILLGFCPVALQKEMR 932
N QA + SS RT+ NC SLTPSL NMI G AL K R
Sbjct: 10344239 NFEQAVFID*SSSWRTFLNCVSLTPSLKNMIRFGSFFTAL*KSSR 10344373
Score = 36.8 bits (74), Expect(9) = 6e-098
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = -2 / -1
Query: 934 LLISFWRATGQKPKRIIFYR 875
LLI+F R+TG KP RIIFYR
Sbjct: 2246765 LLIAFRRSTGHKPLRIIFYR 2246706
Score = 35.4 bits (71), Expect(4) = 2e-021
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = -1 / -3
Query: 605 SGNKPSCPLSCSVG*EQIYG*WVANSHQQLVLHV 504
+G+ +C L S+G*EQ+Y W + S Q L+LHV
Sbjct: 2246094 TGHFSTCSLPRSLG*EQLYCRWTSISDQ*LMLHV 2245993
Score = 33.6 bits (67), Expect(3) = 4e-062
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -2 / -3
Query: 310 PLPALKENVKRVMFYC* 260
PLP L +NVK +MFYC*
Sbjct: 10343811 PLPKLSDNVKNLMFYC* 10343761
Score = 29.0 bits (57), Expect(9) = 6e-098
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -2 / -3
Query: 511 YTYARCTRSVSI 476
Y YARCTRSVSI
Sbjct: 2245899 YRYARCTRSVSI 2245864
Score = 27.6 bits (54), Expect(9) = 6e-098
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = -1 / -1
Query: 977 DPQRGTVSGGMIR 939
DPQ+G V+GGMI+
Sbjct: 2246906 DPQKGVVTGGMIK 2246868
Score = 27.6 bits (54), Expect(5) = 7e-034
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +3 / +1
Query: 876 L*NMILLGFCPVALQKEM 929
L* MIL G CPV L+K M
Sbjct: 2246707 L*KMILSGLCPVDLRKAM 2246760
Score = 26.3 bits (51), Expect(9) = 6e-098
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -3 / -3
Query: 333 VLQMLL*GHYLPSRKT*SASCSTAKI 256
++ ML *GH ++ *S SCSTA++
Sbjct: 2245620 LMSMLQ*GHSQL*KRM*SVSCSTAEL 2245543
>gb|AC007932.3|F11A17 Arabidopsis thaliana chromosome 1 BAC F11A17 sequence, complete
sequence
Length = 102078
Score = 99.6 bits (211), Expect(9) = 7e-098
Identities = 38/47 (80%), Positives = 42/47 (89%)
Frame = -2 / +1
Query: 814 KACASLESDYQPPVTFVVVQKRHHTRLFVNNHNDQRAADRSGNILPG 674
+ACASLE+ YQPPVTFVVVQKRHHTRLF NHND+ + DRSGNILPG
Sbjct: 16849 QACASLEAGYQPPVTFVVVQKRHHTRLFAQNHNDRHSVDRSGNILPG 16989
Score = 84.5 bits (178), Expect(9) = 7e-098
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = -2 / +1
Query: 604 QGTSRPAHYHVLWDENKFTADGLQTLTNNLCYT 506
QGTSRPAHYHVLWDEN FTADGLQ+LTNNLCYT
Sbjct: 17233 QGTSRPAHYHVLWDENNFTADGLQSLTNNLCYT 17331
Score = 77.6 bits (163), Expect(9) = 7e-098
Identities = 31/42 (73%), Positives = 35/42 (83%)
Frame = -2 / +2
Query: 478 IVPPAYYAHLAAFRARFYMEPDTSDSGSVASGATTSRGPPPG 353
+VPPAYYAHLAAFRARFYMEP+TSDSGS+ASG+ G G
Sbjct: 17564 VVPPAYYAHLAAFRARFYMEPETSDSGSMASGSMARGGGMAG 17689
Score = 68.4 bits (143), Expect(9) = 7e-098
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = -2 / +1
Query: 685 ILPGTVVDSKICHPTEFDFYLCSHAGIQ 602
++ GTVVDSKICHPTEFDFYLCSHAGIQ
Sbjct: 17074 LIVGTVVDSKICHPTEFDFYLCSHAGIQ 17157
Score = 60.6 bits (126), Expect(7) = 1e-040
Identities = 26/43 (60%), Positives = 30/43 (69%)
Frame = -2 / +2
Query: 388 SGATTSRGPPPGARNTRAGAANVAVRPLPALKENVKRVMFYC* 260
+ + +RG R+TR N AVRPLPALKENVKRVMFYC*
Sbjct: 17651 ASGSMARGGGMAGRSTRGPNVNAAVRPLPALKENVKRVMFYC* 17779
Score = 57.9 bits (120), Expect(9) = 7e-098
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = -2 / +2
Query: 889 IIFYRDGVSEGQFYQVLLYELDAIRK 812
+I +RDGVSEGQFYQVLLYELDAIRK
Sbjct: 16691 VILHRDGVSEGQFYQVLLYELDAIRK 16768
Score = 49.2 bits (101), Expect(8) = 1e-048
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +2 / -1
Query: 686 VATSIGSTLIIVIINKQPGVMTLLDHDKSNWRLVIRLQ*CTGL 814
+ TS+ IIV+++KQP VMTLL H K +W L+ Q TGL
Sbjct: 16977 IPTSVHRMAIIVVLSKQPRVMTLLHHHKCHWWLITCFQRSTGL 16849
Score = 48.7 bits (100), Expect(8) = 1e-048
Identities = 25/34 (73%), Positives = 27/34 (79%)
Frame = +3 / -2
Query: 501 AYV*HKLLVRVCNPSAVNLFSSHRT**WAGRLVP 602
+YV*HKLLVR +PSAV LFSS RT * AGR VP
Sbjct: 17336 SYV*HKLLVRD*SPSAVKLFSSQRTW**AGREVP 17235
Score = 47.8 bits (98), Expect(8) = 1e-048
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = +3 / -2
Query: 603 *MPAWLHR*KSNSVGWQIFESTTVP 677
*+PA L R*KSNSVGWQI ESTTVP
Sbjct: 17156 *IPA*LQR*KSNSVGWQILESTTVP 17082
Score = 45.5 bits (93), Expect(8) = 1e-048
Identities = 17/24 (70%), Positives = 24/24 (100%)
Frame = +2 / -3
Query: 812 LSNGIKFVQQNLVELSLTDTIPVE 883
L++GIKF++QNLV+LSLTD+IPV+
Sbjct: 16768 LADGIKFIEQNLVKLSLTDSIPVQ 16697
Score = 45.1 bits (92), Expect(8) = 1e-048
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +2 / -3
Query: 338 PGVARPWWRATACRSTARHRSAVTCIWLHVKPSSEGCQMSIVCRRN 475
P A + C + H + V C+WLHV+ S + C M I+CR N
Sbjct: 17704 PACASTSHSTSTCHAPTSH*ATV*CLWLHVESSPKSC*MCIICRGN 17567
Score = 45.1 bits (92), Expect(7) = 1e-040
Identities = 21/44 (47%), Positives = 26/44 (59%)
Frame = -3 / +2
Query: 813 RPVHHWSLITSLQLLLSWSRSVITPGCLLIITMISVLPIEVATY 682
RPV W + + Q L W RSVIT GCLL TMI++ EV +
Sbjct: 16850 RPVLRWKQVINHQ*HLWWCRSVITRGCLLRTTMIAIRWTEVGIF 16981
Score = 40.0 bits (81), Expect(7) = 1e-040
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = -3 / +3
Query: 885 YSTGMVSVRDSSTKFCCTNLMPLER 811
+ TGM SVRD+ TKFC NLMP R
Sbjct: 16695 FCTGMESVRDNFTKFCSMNLMPSAR 16769
Score = 38.6 bits (78), Expect(7) = 1e-040
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = -1 / +3
Query: 674 HCGGLKDLPSNRV*FLPVQPCWHSG 600
HC GL +LP RV* LP+ CW+SG
Sbjct: 17085 HCCGL*NLPPYRV*LLPL*SCWYSG 17159
Score = 36.8 bits (74), Expect(9) = 7e-098
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = -2 / +1
Query: 934 LLISFWRATGQKPKRIIFYR 875
LLI+F R+TG KP RIIFYR
Sbjct: 16561 LLIAFRRSTGHKPLRIIFYR 16620
Score = 35.4 bits (71), Expect(7) = 1e-040
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = -1 / +3
Query: 605 SGNKPSCPLSCSVG*EQIYG*WVANSHQQLVLHV 504
+G+ +C L S+G*EQ+Y W + S Q L+LHV
Sbjct: 17232 TGHFSTCSLPRSLG*EQLYCRWTSISDQ*LMLHV 17333
Score = 34.1 bits (68), Expect(7) = 1e-040
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -1 / +1
Query: 473 SSCILCSSGSLPSSVLHGAR 414
S CILC+S S S+LHGAR
Sbjct: 17569 SPCILCTSSSF*GSILHGAR 17628
Score = 31.8 bits (63), Expect(8) = 1e-048
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2 / -3
Query: 266 VEHDALHVFLEGR*WPHSNI 325
VEHD LH+ + WPH +I
Sbjct: 17773 VEHDTLHILFQSWEWPHCSI 17714
Score = 29.0 bits (57), Expect(9) = 7e-098
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -2 / +3
Query: 511 YTYARCTRSVSI 476
Y YARCTRSVSI
Sbjct: 17427 YRYARCTRSVSI 17462
Score = 27.6 bits (54), Expect(8) = 1e-048
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +3 / -2
Query: 876 L*NMILLGFCPVALQKEM 929
L* MIL G CPV L+K M
Sbjct: 16619 L*KMILSGLCPVDLRKAM 16566
Score = 27.6 bits (54), Expect(9) = 7e-098
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = -1 / +1
Query: 977 DPQRGTVSGGMIR 939
DPQ+G V+GGMI+
Sbjct: 16420 DPQKGVVTGGMIK 16458
Score = 26.3 bits (51), Expect(9) = 7e-098
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -3 / +3
Query: 333 VLQMLL*GHYLPSRKT*SASCSTAKI 256
++ ML *GH ++ *S SCSTA++
Sbjct: 17706 LMSMLQ*GHSQL*KRM*SVSCSTAEL 17783
Score = 25.4 bits (49), Expect(8) = 1e-048
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = +3 / -3
Query: 477 IDTERVHLAYV 509
I+TERVHLAY+
Sbjct: 17461 IETERVHLAYL 17429
Score = 22.6 bits (43), Expect(7) = 1e-040
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -1 / +2
Query: 512 LHVCQVHTLSIN 477
+ VC++HTLS N
Sbjct: 17426 VQVCKMHTLSFN 17461
>gb|AC020889.3|AC020889 Genomic sequence for Arabidopsis thaliana BAC T1N15 from chromosome
I, complete sequence
Length = 95295
Score = 99.6 bits (211), Expect(9) = 7e-098
Identities = 38/47 (80%), Positives = 42/47 (89%)
Frame = -2 / -3
Query: 814 KACASLESDYQPPVTFVVVQKRHHTRLFVNNHNDQRAADRSGNILPG 674
+ACASLE+ YQPPVTFVVVQKRHHTRLF NHND+ + DRSGNILPG
Sbjct: 2107 QACASLEAGYQPPVTFVVVQKRHHTRLFAQNHNDRHSVDRSGNILPG 1967
Score = 84.5 bits (178), Expect(9) = 7e-098
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = -2 / -3
Query: 604 QGTSRPAHYHVLWDENKFTADGLQTLTNNLCYT 506
QGTSRPAHYHVLWDEN FTADGLQ+LTNNLCYT
Sbjct: 1723 QGTSRPAHYHVLWDENNFTADGLQSLTNNLCYT 1625
Score = 77.6 bits (163), Expect(9) = 7e-098
Identities = 31/42 (73%), Positives = 35/42 (83%)
Frame = -2 / -1
Query: 478 IVPPAYYAHLAAFRARFYMEPDTSDSGSVASGATTSRGPPPG 353
+VPPAYYAHLAAFRARFYMEP+TSDSGS+ASG+ G G
Sbjct: 1392 VVPPAYYAHLAAFRARFYMEPETSDSGSMASGSMARGGGMAG 1267
Score = 68.4 bits (143), Expect(9) = 7e-098
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = -2 / -3
Query: 685 ILPGTVVDSKICHPTEFDFYLCSHAGIQ 602
++ GTVVDSKICHPTEFDFYLCSHAGIQ
Sbjct: 1882 LIVGTVVDSKICHPTEFDFYLCSHAGIQ 1799
Score = 60.6 bits (126), Expect(7) = 1e-040
Identities = 26/43 (60%), Positives = 30/43 (69%)
Frame = -2 / -1
Query: 388 SGATTSRGPPPGARNTRAGAANVAVRPLPALKENVKRVMFYC* 260
+ + +RG R+TR N AVRPLPALKENVKRVMFYC*
Sbjct: 1305 ASGSMARGGGMAGRSTRGPNVNAAVRPLPALKENVKRVMFYC* 1177
Score = 57.9 bits (120), Expect(9) = 7e-098
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = -2 / -1
Query: 889 IIFYRDGVSEGQFYQVLLYELDAIRK 812
+I +RDGVSEGQFYQVLLYELDAIRK
Sbjct: 2265 VILHRDGVSEGQFYQVLLYELDAIRK 2188
Score = 49.2 bits (101), Expect(8) = 1e-048
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +2 / +2
Query: 686 VATSIGSTLIIVIINKQPGVMTLLDHDKSNWRLVIRLQ*CTGL 814
+ TS+ IIV+++KQP VMTLL H K +W L+ Q TGL
Sbjct: 1979 IPTSVHRMAIIVVLSKQPRVMTLLHHHKCHWWLITCFQRSTGL 2107
Score = 48.7 bits (100), Expect(8) = 1e-048
Identities = 25/34 (73%), Positives = 27/34 (79%)
Frame = +3 / +3
Query: 501 AYV*HKLLVRVCNPSAVNLFSSHRT**WAGRLVP 602
+YV*HKLLVR +PSAV LFSS RT * AGR VP
Sbjct: 1620 SYV*HKLLVRD*SPSAVKLFSSQRTW**AGREVP 1721
Score = 47.8 bits (98), Expect(8) = 1e-048
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = +3 / +3
Query: 603 *MPAWLHR*KSNSVGWQIFESTTVP 677
*+PA L R*KSNSVGWQI ESTTVP
Sbjct: 1800 *IPA*LQR*KSNSVGWQILESTTVP 1874
Score = 45.5 bits (93), Expect(8) = 1e-048
Identities = 17/24 (70%), Positives = 24/24 (100%)
Frame = +2 / +1
Query: 812 LSNGIKFVQQNLVELSLTDTIPVE 883
L++GIKF++QNLV+LSLTD+IPV+
Sbjct: 2188 LADGIKFIEQNLVKLSLTDSIPVQ 2259
Score = 45.1 bits (92), Expect(7) = 1e-040
Identities = 21/44 (47%), Positives = 26/44 (59%)
Frame = -3 / -1
Query: 813 RPVHHWSLITSLQLLLSWSRSVITPGCLLIITMISVLPIEVATY 682
RPV W + + Q L W RSVIT GCLL TMI++ EV +
Sbjct: 2106 RPVLRWKQVINHQ*HLWWCRSVITRGCLLRTTMIAIRWTEVGIF 1975
Score = 45.1 bits (92), Expect(8) = 1e-048
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +2 / +1
Query: 338 PGVARPWWRATACRSTARHRSAVTCIWLHVKPSSEGCQMSIVCRRN 475
P A + C + H + V C+WLHV+ S + C M I+CR N
Sbjct: 1252 PACASTSHSTSTCHAPTSH*ATV*CLWLHVESSPKSC*MCIICRGN 1389
Score = 40.0 bits (81), Expect(7) = 1e-040
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = -3 / -2
Query: 885 YSTGMVSVRDSSTKFCCTNLMPLER 811
+ TGM SVRD+ TKFC NLMP R
Sbjct: 2261 FCTGMESVRDNFTKFCSMNLMPSAR 2187
Score = 38.6 bits (78), Expect(7) = 1e-040
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = -1 / -2
Query: 674 HCGGLKDLPSNRV*FLPVQPCWHSG 600
HC GL +LP RV* LP+ CW+SG
Sbjct: 1871 HCCGL*NLPPYRV*LLPL*SCWYSG 1797
Score = 36.8 bits (74), Expect(9) = 7e-098
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = -2 / -3
Query: 934 LLISFWRATGQKPKRIIFYR 875
LLI+F R+TG KP RIIFYR
Sbjct: 2395 LLIAFRRSTGHKPLRIIFYR 2336
Score = 35.4 bits (71), Expect(7) = 1e-040
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = -1 / -2
Query: 605 SGNKPSCPLSCSVG*EQIYG*WVANSHQQLVLHV 504
+G+ +C L S+G*EQ+Y W + S Q L+LHV
Sbjct: 1724 TGHFSTCSLPRSLG*EQLYCRWTSISDQ*LMLHV 1623
Score = 34.1 bits (68), Expect(7) = 1e-040
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -1 / -3
Query: 473 SSCILCSSGSLPSSVLHGAR 414
S CILC+S S S+LHGAR
Sbjct: 1387 SPCILCTSSSF*GSILHGAR 1328
Score = 31.8 bits (63), Expect(8) = 1e-048
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2 / +1
Query: 266 VEHDALHVFLEGR*WPHSNI 325
VEHD LH+ + WPH +I
Sbjct: 1183 VEHDTLHILFQSWEWPHCSI 1242
Score = 29.0 bits (57), Expect(9) = 7e-098
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -2 / -2
Query: 511 YTYARCTRSVSI 476
Y YARCTRSVSI
Sbjct: 1529 YRYARCTRSVSI 1494
Score = 27.6 bits (54), Expect(9) = 7e-098
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = -1 / -3
Query: 977 DPQRGTVSGGMIR 939
DPQ+G V+GGMI+
Sbjct: 2536 DPQKGVVTGGMIK 2498
Score = 27.6 bits (54), Expect(8) = 1e-048
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +3 / +3
Query: 876 L*NMILLGFCPVALQKEM 929
L* MIL G CPV L+K M
Sbjct: 2337 L*KMILSGLCPVDLRKAM 2390
Score = 26.3 bits (51), Expect(9) = 7e-098
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -3 / -2
Query: 333 VLQMLL*GHYLPSRKT*SASCSTAKI 256
++ ML *GH ++ *S SCSTA++
Sbjct: 1250 LMSMLQ*GHSQL*KRM*SVSCSTAEL 1173
Score = 25.4 bits (49), Expect(8) = 1e-048
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = +3 / +1
Query: 477 IDTERVHLAYV 509
I+TERVHLAY+
Sbjct: 1495 IETERVHLAYL 1527
Score = 22.6 bits (43), Expect(7) = 1e-040
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -1 / -1
Query: 512 LHVCQVHTLSIN 477
+ VC++HTLS N
Sbjct: 1530 VQVCKMHTLSFN 1495
>ref|NM_179779.1| Arabidopsis thaliana unknown protein AT2G27880 mRNA, complete cds
Length = 2994
Score = 344 bits (745), Expect(2) = 1e-097
Identities = 144/201 (71%), Positives = 163/201 (81%)
Frame = -2 / +1
Query: 973 PKGGLSLVA*LGNLLISFWRATGQKPKRIIFYRDGVSEGQFYQVLLYELDAIRKACASLE 794
P+ GL + I+F RATGQ P+RIIFYRDGVSEGQF QVLL+E+ AIRKAC SL+
Sbjct: 2320 PQRGLVHSGLIREHFIAFRRATGQIPQRIIFYRDGVSEGQFSQVLLHEMTAIRKACNSLQ 2499
Query: 793 SDYQPPVTFVVVQKRHHTRLFVNNHNDQRAADRSGNILPGTVVDSKICHPTEFDFYLCSH 614
+Y P VTFV+VQKRHHTRLF H ++ D+SGNI PGTVVD+KICHP EFDFYL SH
Sbjct: 2500 ENYVPRVTFVIVQKRHHTRLFPEQHGNRDMTDKSGNIQPGTVVDTKICHPNEFDFYLNSH 2679
Query: 613 AGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRA 434
AGIQGTSRPAHYHVL DEN FTAD LQ LTNNLCYTYARCT+SVSIVPPAYYAHLAAFRA
Sbjct: 2680 AGIQGTSRPAHYHVLLDENGFTADQLQMLTNNLCYTYARCTKSVSIVPPAYYAHLAAFRA 2859
Query: 433 RFYMEPDTSDSGSVASGATTS 371
R+YME + SD GS S ++T+
Sbjct: 2860 RYYMESEMSDGGSSRSRSSTT 2922
Score = 134 bits (288), Expect = 3e-030
Identities = 72/191 (37%), Positives = 110/191 (57%)
Frame = +2 / -1
Query: 368 TACRSTARHRSAVTCIWLHVKPSSEGCQMSIVCRRND*Y*ACAPGIRVTQVVGESLQPIS 547
T C + R+++ + LHV +E Q+S+V ++*+ C P IRV +VV E LQ IS
Sbjct: 2925 TCC*APGPARTSIRHLTLHVVAGTECSQVSVVGWWHN*HRFCTPRIRVAEVVCEHLQLIS 2746
Query: 548 RKFVLIPQNMIMGRTACSLNASMAAQVEIKLGWMANL*VHHSARQYVATSIGSTLIIVII 727
+ VLI + M+M R ACSLN SMA Q+E++ + + VH S +AT I I V++
Sbjct: 2745 GETVLIEKYMVMCRPACSLNTSMAVQIEVEFIRVTDFSVHDSTWLNIATLISHITIPVLL 2566
Query: 728 NKQPGVMTLLDHDKSNWRLVIRLQ*CTGLSNGIKFVQQNLVELSLTDTIPVEYDPLGFLS 907
+Q V+T LD+ +SN R +I L+ T L++ + QNL +L ++ +E DPL +L+
Sbjct: 2565 REQTCVVTFLDNHESNTRNIILLERVTSLADSSHLM*QNLTKLPFAYSVTIEDDPLRYLA 2386
Query: 908 SRPPERNEKVP 940
PE E P
Sbjct: 2385 CSSPECYEMFP 2353
Score = 104 bits (221), Expect(2) = 5e-035
Identities = 49/71 (69%), Positives = 55/71 (77%)
Frame = +3 / -2
Query: 468 GGTIDTERVHLAYV*HKLLVRVCNPSAVNLFSSHRT**WAGRLVP*MPAWLHR*KSNSVG 647
GGTIDT+ VHLAYV* +L V +CN SAV FSS T * AG LVP*+PAWL +*KSNS+G
Sbjct: 2825 GGTIDTDFVHLAYV*QRLFVSICN*SAVKPFSSRSTW*CAGLLVP*IPAWLFK*KSNSLG 2646
Query: 648 WQIFESTTVPG 680
QI STTVPG
Sbjct: 2645 *QILVSTTVPG 2613
Score = 66.6 bits (139), Expect(2) = 5e-035
Identities = 35/62 (56%), Positives = 39/62 (62%)
Frame = +3 / -2
Query: 747 *RFWTTTKVTGGW*SDSNDAQAFLMASSSYNRTW*NCPSLTPSL*NMILLGFCPVALQKE 926
*RFWT TKVT G * + QA +A S +RT NCPSLTPS * MIL G PVAL
Sbjct: 2546 *RFWTITKVTRGT*FSWRELQALRIAVISCSRT*LNCPSLTPSR*KMIL*GIWPVALLNA 2367
Query: 927 MR 932
M+
Sbjct: 2366 MK 2361
Score = 35.9 bits (72), Expect(2) = 1e-097
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = -2 / +1
Query: 316 VRPLPALKENVKRVMFYC* 260
+ LPA+K+NVK VMFYC*
Sbjct: 2938 ISQLPAIKDNVKEVMFYC* 2994
>emb|BX821460.1|CNS0A8DH Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL43ZD04 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 1092
Score = 343 bits (743), Expect(2) = 2e-097
Identities = 141/186 (75%), Positives = 158/186 (84%)
Frame = -2 / +2
Query: 928 ISFWRATGQKPKRIIFYRDGVSEGQFYQVLLYELDAIRKACASLESDYQPPVTFVVVQKR 749
I+F RATGQ P+RIIFYRDGVSEGQF QVLL+E+ AIRKAC SL+ +Y P VTFV+VQKR
Sbjct: 281 IAFRRATGQIPQRIIFYRDGVSEGQFSQVLLHEMTAIRKACNSLQENYVPRVTFVIVQKR 460
Query: 748 HHTRLFVNNHNDQRAADRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVL 569
HHTRLF H ++ D+SGNI PGTVVD+KICHP EFDFYL SHAGIQGTSRPAHYHVL
Sbjct: 461 HHTRLFPEQHGNRDMTDKSGNIQPGTVVDTKICHPNEFDFYLNSHAGIQGTSRPAHYHVL 640
Query: 568 WDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVA 389
DEN FTAD LQ LTNNLCYTYARCT+SVSIVPPAYYAHLAAFRAR+YME + SD GS
Sbjct: 641 LDENGFTADQLQMLTNNLCYTYARCTKSVSIVPPAYYAHLAAFRARYYMESEMSDGGSSR 820
Query: 388 SGATTS 371
S ++T+
Sbjct: 821 SRSSTT 838
Score = 134 bits (288), Expect = 3e-030
Identities = 72/191 (37%), Positives = 110/191 (57%)
Frame = +2 / -3
Query: 368 TACRSTARHRSAVTCIWLHVKPSSEGCQMSIVCRRND*Y*ACAPGIRVTQVVGESLQPIS 547
T C + R+++ + LHV +E Q+S+V ++*+ C P IRV +VV E LQ IS
Sbjct: 841 TCC*APGPARTSIRHLTLHVVAGTECSQVSVVGWWHN*HRFCTPRIRVAEVVCEHLQLIS 662
Query: 548 RKFVLIPQNMIMGRTACSLNASMAAQVEIKLGWMANL*VHHSARQYVATSIGSTLIIVII 727
+ VLI + M+M R ACSLN SMA Q+E++ + + VH S +AT I I V++
Sbjct: 661 GETVLIEKYMVMCRPACSLNTSMAVQIEVEFIRVTDFSVHDSTWLNIATLISHITIPVLL 482
Query: 728 NKQPGVMTLLDHDKSNWRLVIRLQ*CTGLSNGIKFVQQNLVELSLTDTIPVEYDPLGFLS 907
+Q V+T LD+ +SN R +I L+ T L++ + QNL +L ++ +E DPL +L+
Sbjct: 481 REQTCVVTFLDNHESNTRNIILLERVTSLADSSHLM*QNLTKLPFAYSVTIEDDPLRYLA 302
Query: 908 SRPPERNEKVP 940
PE E P
Sbjct: 301 CSSPECYEMFP 269
Score = 104 bits (221), Expect(2) = 5e-035
Identities = 49/71 (69%), Positives = 55/71 (77%)
Frame = +3 / -1
Query: 468 GGTIDTERVHLAYV*HKLLVRVCNPSAVNLFSSHRT**WAGRLVP*MPAWLHR*KSNSVG 647
GGTIDT+ VHLAYV* +L V +CN SAV FSS T * AG LVP*+PAWL +*KSNS+G
Sbjct: 741 GGTIDTDFVHLAYV*QRLFVSICN*SAVKPFSSRSTW*CAGLLVP*IPAWLFK*KSNSLG 562
Query: 648 WQIFESTTVPG 680
QI STTVPG
Sbjct: 561 *QILVSTTVPG 529
Score = 66.6 bits (139), Expect(2) = 5e-035
Identities = 35/62 (56%), Positives = 39/62 (62%)
Frame = +3 / -1
Query: 747 *RFWTTTKVTGGW*SDSNDAQAFLMASSSYNRTW*NCPSLTPSL*NMILLGFCPVALQKE 926
*RFWT TKVT G * + QA +A S +RT NCPSLTPS * MIL G PVAL
Sbjct: 462 *RFWTITKVTRGT*FSWRELQALRIAVISCSRT*LNCPSLTPSR*KMIL*GIWPVALLNA 283
Query: 927 MR 932
M+
Sbjct: 282 MK 277
Score = 35.9 bits (72), Expect(2) = 2e-097
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = -2 / +2
Query: 316 VRPLPALKENVKRVMFYC* 260
+ LPA+K+NVK VMFYC*
Sbjct: 854 ISQLPAIKDNVKEVMFYC* 910
>gb|CB260762.1|CB260762 67-E009520-012-003-F21-T7R MPIZ-ADIS-012 Arabidopsis thaliana cDNA
clone MPIZp769F213Q 5-PRIME, mRNA sequence
Length = 532
Score = 350 bits (759), Expect = 4e-095
Identities = 136/152 (89%), Positives = 145/152 (95%)
Frame = -2 / +3
Query: 868 VSEGQFYQVLLYELDAIRKACASLESDYQPPVTFVVVQKRHHTRLFVNNHNDQRAADRSG 689
VSEGQFYQVLLYELDAIRKACASLE +YQPPVTF+VVQKRHHTRLF NNH D+ + RSG
Sbjct: 3 VSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFANNHRDKNSTHRSG 182
Query: 688 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCY 509
NILPGTVVD+KICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDEN FTADG+Q+LTNNLCY
Sbjct: 183 NILPGTVVDTKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCY 362
Query: 508 TYARCTRSVSIVPPAYYAHLAAFRARFYMEPD 413
TYARCTRSVSIVPPAYYAHLAAFRARFY+EP+
Sbjct: 363 TYARCTRSVSIVPPAYYAHLAAFRARFYLEPE 458
Score = 113 bits (241), Expect = 1e-023
Identities = 50/121 (41%), Positives = 79/121 (65%)
Frame = +2 / -3
Query: 494 APGIRVTQVVGESLQPISRKFVLIPQNMIMGRTACSLNASMAAQVEIKLGWMANL*VHHS 673
AP I +T++V + L I + VL+P+NM+M R ACSLN MA +VE++ WM V++S
Sbjct: 377 APRIGITEIVSQRLNTICCEIVLVPKNMVMCRPACSLNTRMATKVEVEFSWMTYFSVNYS 198
Query: 674 ARQYVATSIGSTLIIVIINKQPGVMTLLDHDKSNWRLVIRLQ*CTGLSNGIKFVQQNLVE 853
++ S+ + + VII+KQ V+TLL + + + L+IR + CT LSN I+ ++ NL+E
Sbjct: 197 TW*DISASVSTVFVSVIISKQTSVVTLLYNYECHRWLIIRFKRCTSLSNCIQLIE*NLIE 18
Query: 854 L 856
L
Sbjct: 17 L 15
Score = 105 bits (223), Expect(3) = 6e-033
Identities = 55/93 (59%), Positives = 62/93 (66%)
Frame = +3 / -1
Query: 408 LVSGSM*NXXXXXXXXXXXXGGTIDTERVHLAYV*HKLLVRVCNPSAVNLFSSHRT**WA 587
++SGS * GGTI+T+RVH A V* +LLVR PSAV LFSS RT * A
Sbjct: 463 IISGSR*KRARNAAR*A*YAGGTIETDRVHRA*V*QRLLVRD*IPSAVKLFSSQRTW*CA 284
Query: 588 GRLVP*MPAWLHR*KSNSVGWQIFESTTVPGSM 686
G LVP*+PAWL R*KSNSVG I STTVPG +
Sbjct: 283 GLLVP*IPAWLQR*KSNSVG*HILVSTTVPGKI 185
Score = 54.2 bits (112), Expect(3) = 6e-033
Identities = 27/41 (65%), Positives = 32/41 (78%)
Frame = +3 / -1
Query: 747 *RFWTTTKVTGGW*SDSNDAQAFLMASSSYNRTW*NCPSLT 869
*RF TT VTGG * S+DAQAF +AS+S ++T *NCPSLT
Sbjct: 124 *RFCTTMNVTGG**FGSSDAQAFRIASNS*SKT**NCPSLT 2
Score = 22.6 bits (43), Expect(3) = 6e-033
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1 / -2
Query: 721 DY*QTTWCDDAS 756
DY*QT C DAS
Sbjct: 150 DY*QTNECGDAS 115
>emb|BX818680.1|CNS0ACI7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL91ZD02 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 728
Score = 257 bits (556), Expect(3) = 8e-086
Identities = 102/114 (89%), Positives = 106/114 (92%)
Frame = -2 / +1
Query: 694 SGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNL 515
SGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDEN FTADGLQ+LTNNL
Sbjct: 121 SGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNL 300
Query: 514 CYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGATTSRGPPPG 353
CYTYARCTRSVSIVPPAYYAHLAAFRARFYMEP+TSDSGS+ASG+ G G
Sbjct: 301 CYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMASGSMARGGGMAG 462
Score = 145 bits (312), Expect(3) = 1e-042
Identities = 73/111 (65%), Positives = 79/111 (71%)
Frame = +3 / -1
Query: 354 PGGGPRLVVAPLATDPLSLVSGSM*NXXXXXXXXXXXXGGTIDTERVHLAYV*HKLLVRV 533
P P + PLA +PLS VSGSM*N GGTI+TERVHLAYV*HKLLVR
Sbjct: 461 PAIPPPRAMLPLAIEPLSDVSGSM*NRALKAARCA*YAGGTIETERVHLAYV*HKLLVRD 282
Query: 534 CNPSAVNLFSSHRT**WAGRLVP*MPAWLHR*KSNSVGWQIFESTTVPGSM 686
+PSAV LFSS RT * AGR VP*+PA L R*KSNSVGWQI ESTTVPG +
Sbjct: 281 *SPSAVKLFSSQRTW**AGREVP*IPA*LQR*KSNSVGWQILESTTVPGKI 129
Score = 116 bits (249), Expect(3) = 1e-045
Identities = 50/94 (53%), Positives = 65/94 (69%)
Frame = -1 / +3
Query: 695 KWQHTAGHCGGLKDLPSNRV*FLPVQPCWHSGNKPSCPLSCSVG*EQIYG*WVANSHQQL 516
KW++ HC GL +LP RV* LP+ W+SG+ +C L S+G*EQ+Y W + S Q L
Sbjct: 120 KWEYFTWHCCGL*NLPPYRV*LLPL*SRWYSGHFSTCSLPRSLG*EQLYCRWTSISDQ*L 299
Query: 515 VLHVCQVHTLSINRSSCILCSSGSLPSSVLHGAR 414
+LHVC++HTLS N S CILC+S S S+LHGAR
Sbjct: 300 MLHVCKMHTLSFNCSPCILCTSSSF*GSILHGAR 401
Score = 112 bits (239), Expect(2) = 1e-026
Identities = 51/119 (42%), Positives = 74/119 (62%)
Frame = +2 / -3
Query: 338 PGVARPWWRATACRSTARHRSAVTCIWLHVKPSSEGCQMSIVCRRND*Y*ACAPGIRVTQ 517
P A + C + H + V C WLHV+ S + C M I+CR N+* *ACA IRVT
Sbjct: 477 PACASTSHSTSTCHAPTSH*ATV*CFWLHVESSPKSC*MCIICRGNN*N*ACASCIRVT* 298
Query: 518 VVGESLQPISRKFVLIPQNMIMGRTACSLNASMAAQVEIKLGWMANL*VHHSARQYVAT 694
V+G+ L+ I K VLIP+N++M R+ +LN S+ +V++KL +A+ VH+SAR + T
Sbjct: 297 VIGQRLKSICSKVVLIPKNVVMSRSRSALNTSVTTEVKVKLCRVADFRVHNSAR*NIPT 121
Score = 100 bits (212), Expect(3) = 4e-033
Identities = 46/101 (45%), Positives = 55/101 (54%)
Frame = +1 / -2
Query: 391 PQIRCHLYLAPCKTELGRLPDEHSMQEERLILSVCTWHTCNTSCW*EFATHQP*ICSHPT 570
P C ++LAPC+ E +L D H+MQ E+L LSVC HTCN S W E H * CSHP
Sbjct: 424 PLSHCLMFLAPCRIEP*KLLDVHNMQGEQLKLSVCILHTCNISYWSEIEVHLQ*SCSHPK 245
Query: 571 EHDNGQDGLFPECQHGCTGRNQTRLDGKSLSPPQCPAVCCH 693
E N Q PE Q G++QT G+ SP QC H
Sbjct: 244 ERGNEQVEKCPEYQRDYRGKSQTL*GGRF*SPQQCQVKYSH 122
Score = 78.5 bits (165), Expect(3) = 8e-086
Identities = 29/38 (76%), Positives = 33/38 (86%)
Frame = -2 / +3
Query: 811 ACASLESDYQPPVTFVVVQKRHHTRLFVNNHNDQRAAD 698
AC+SLE+ YQPPVTFVVVQKRHHTRLF NHND+ + D
Sbjct: 3 ACSSLEAGYQPPVTFVVVQKRHHTRLFAQNHNDRHSVD 116
Score = 60.6 bits (126), Expect(3) = 1e-045
Identities = 26/43 (60%), Positives = 30/43 (69%)
Frame = -2 / +1
Query: 388 SGATTSRGPPPGARNTRAGAANVAVRPLPALKENVKRVMFYC* 260
+ + +RG R+TR N AVRPLPALKENVKRVMFYC*
Sbjct: 424 ASGSMARGGGMAGRSTRGPNVNAAVRPLPALKENVKRVMFYC* 552
Score = 46.9 bits (96), Expect(3) = 1e-045
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = -3 / +1
Query: 813 RPVHHWSLITSLQLLLSWSRSVITPGCLLIITMISV 706
RPV W + + QL L W RSVIT GCLL TMI++
Sbjct: 1 RPVLRWKQVINHQLHLWWCRSVITRGCLLRTTMIAI 108
Score = 44.6 bits (91), Expect(3) = 1e-042
Identities = 19/33 (57%), Positives = 23/33 (69%)
Frame = +2 / -1
Query: 713 IIVIINKQPGVMTLLDHDKSNWRLVIRLQ*CTG 811
IIV+++KQP VMTLL H K NW L+ Q TG
Sbjct: 101 IIVVLSKQPRVMTLLHHHKCNWWLITCFQRRTG 3
Score = 41.8 bits (85), Expect(3) = 4e-033
Identities = 18/36 (50%), Positives = 20/36 (55%)
Frame = +1 / -3
Query: 706 HADHCDY*QTTWCDDASGPRQK*LEAGNQTPMMHRP 813
+ DHC QT CDDAS P Q *L N P +RP
Sbjct: 108 NGDHCGSEQTASCDDASAPPQM*LVVDNLLPAKNRP 1
Score = 40.5 bits (82), Expect(3) = 4e-033
Identities = 20/39 (51%), Positives = 24/39 (61%)
Frame = +3 / -1
Query: 264 Q*NMTRFTFSLRAGNGLTATFAAPALVLRAPGGGPRLVV 380
Q*N+TRFTFS RAG+GLTA VL PR ++
Sbjct: 548 Q*NITRFTFSFRAGSGLTAALTLGPRVLLPAIPPPRAML 432
Score = 30.4 bits (60), Expect(2) = 1e-026
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = +3 / -2
Query: 741 V**RFWTTTKVTGGW*SDSNDAQA 812
V**RF TTT VTGG * S++ QA
Sbjct: 73 V**RFCTTTNVTGG**PASSEEQA 2
Score = 24.0 bits (46), Expect(3) = 1e-042
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +2 / -3
Query: 266 VEHDALHVFLEGR*WPHSNI 325
VEH+ L++ + WP+ +I
Sbjct: 546 VEHNTLYILFQSWEWPYCSI 487
Score = 23.5 bits (45), Expect(3) = 8e-086
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -3 / +2
Query: 333 VLQMLL*GHYLPSRKT*SASCSTAKI 256
++ ML *GH ++ *S CSTA++
Sbjct: 479 LMSMLQ*GHSQL*KRM*SVLCSTAEL 556
>gb|AV523806.1|AV523806 AV523806 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZL40f03F 3', mRNA
sequence
Length = 447
Score = 306 bits (663), Expect = 6e-082
Identities = 122/141 (86%), Positives = 128/141 (90%)
Frame = -2 / -1
Query: 775 VTFVVVQKRHHTRLFVNNHNDQRAADRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGT 596
VTFVVVQKRHHTRLF NHND+ + DRSGNILPGTVVDSKICH TEFDFYLCSHAGIQGT
Sbjct: 447 VTFVVVQKRHHTRLFAQNHNDRHSVDRSGNILPGTVVDSKICHRTEFDFYLCSHAGIQGT 268
Query: 595 SRPAHYHVLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEP 416
SRPAHYHVLWDEN FTADGLQ+LTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEP
Sbjct: 267 SRPAHYHVLWDENNFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEP 88
Query: 415 DTSDSGSVASGATTSRGPPPG 353
+TSDSGS+ASG+ G G
Sbjct: 87 ETSDSGSMASGSMARVGGMAG 25
Score = 145 bits (311), Expect = 2e-033
Identities = 64/132 (48%), Positives = 90/132 (68%)
Frame = +2 / +1
Query: 374 CRSTARHRSAVTCIWLHVKPSSEGCQMSIVCRRND*Y*ACAPGIRVTQVVGESLQPISRK 553
C + H + V C+WLHV+ S + C M I+CR N+* *ACA IRVT V+G+ L+ I K
Sbjct: 46 CHAPTSH*ATV*CLWLHVESSPKSC*MCIICRGNN*N*ACASCIRVT*VIGQRLKSICSK 225
Query: 554 FVLIPQNMIMGRTACSLNASMAAQVEIKLGWMANL*VHHSARQYVATSIGSTLIIVIINK 733
VLIP+N++M R+ +LN SM +V++KL +A+ VH+SAR + TS+ IIV+++K
Sbjct: 226 VVLIPKNVVMSRSRSALNTSMTTEVKVKLCTVADFRVHNSAR*NIPTSVHRMAIIVVLSK 405
Query: 734 QPGVMTLLDHDK 769
QP VMTLL H K
Sbjct: 406 QPRVMTLLHHHK 441
Score = 142 bits (305), Expect = 1e-032
Identities = 72/111 (64%), Positives = 78/111 (70%)
Frame = +3 / +2
Query: 354 PGGGPRLVVAPLATDPLSLVSGSM*NXXXXXXXXXXXXGGTIDTERVHLAYV*HKLLVRV 533
P P + PLA +PLS VSGSM*N GGTI+TERVHLAYV*HKLLVR
Sbjct: 26 PAIPPTRAMLPLAIEPLSDVSGSM*NRALKAARCA*YAGGTIETERVHLAYV*HKLLVRD 205
Query: 534 CNPSAVNLFSSHRT**WAGRLVP*MPAWLHR*KSNSVGWQIFESTTVPGSM 686
+PSAV LFSS RT * AGR VP*+PA L R*KSNSV WQI ESTTVPG +
Sbjct: 206 *SPSAVKLFSSQRTW**AGREVP*IPA*LQR*KSNSVRWQILESTTVPGKI 358
Score = 141 bits (302), Expect = 4e-032
Identities = 63/118 (53%), Positives = 79/118 (66%)
Frame = -1 / -3
Query: 767 CRGPEASSHQVVC**SQ*SACCR*KWQHTAGHCGGLKDLPSNRV*FLPVQPCWHSGNKPS 588
C G EASSH+ VC Q*S KW++ HC GL +LP RV* LP+ CW+SG+ +
Sbjct: 439 CGGAEASSHEAVCSEPQ*SPFGGQKWEYFTWHCCGL*NLPPYRV*LLPL*SCWYSGHFST 260
Query: 587 CPLSCSVG*EQIYG*WVANSHQQLVLHVCQVHTLSINRSSCILCSSGSLPSSVLHGAR 414
C L S+G*EQ+Y W + S Q L+LHVC++HTLS N S CILC+S S S+LHGAR
Sbjct: 259 CSLPRSLG*EQLYCRWTSISDQ*LMLHVCKMHTLSFNCSPCILCTSSSF*GSILHGAR 86
Score = 132 bits (282), Expect = 2e-029
Identities = 60/126 (47%), Positives = 69/126 (54%)
Frame = +1 / +3
Query: 391 PQIRCHLYLAPCKTELGRLPDEHSMQEERLILSVCTWHTCNTSCW*EFATHQP*ICSHPT 570
P C + LAPC+ E +L D H+MQ E+L LSVC HTCN S W E H * CSHP
Sbjct: 63 PLSHCLMSLAPCRIEP*KLLDVHNMQGEQLKLSVCILHTCNISYWSEIEVHLQ*SCSHPK 242
Query: 571 EHDNGQDGLFPECQHGCTGRNQTRLDGKSLSPPQCPAVCCHFYRQHADHCDY*QTTWCDD 750
E N Q PE QH G++QT G+ SP QC HF + DHC QT CDD
Sbjct: 243 ERGNEQVEKCPEYQHDYRGKSQTLYGGRF*SPQQCQVKYSHFCPPNGDHCGSEQTASCDD 422
Query: 751 ASGPRQ 768
AS P Q
Sbjct: 423 ASAPPQ 440
Score = 112 bits (240), Expect = 1e-023
Identities = 62/126 (49%), Positives = 67/126 (53%)
Frame = -3 / -2
Query: 768 LSWSRSVITPGCLLIITMISVLPIEVATYCRALWWTQRFAIQPSLISTCAAMLAFREQAV 589
L W RSVIT GCLL TMI++ EV + AL WT + A SL T ML FR
Sbjct: 440 LWWCRSVITRGCLLRTTMIAIRWTEVGIFYLALLWTLKSATVQSLTFTSVVMLVFRALLD 261
Query: 588 LPIIMFCGMRTNLRLMGCKLSPTTCVTRMPGAHAQYQSFLLHTMLIWQPSELGFTWSQIQ 409
L I F GMRT L M L P T VTRM AHAQ+Q F LH M I Q L TWSQ
Sbjct: 260 LLITTFFGMRTTLLQMDFNL*PITYVTRMQDAHAQFQLFPLHIMHI*QLLGLDSTWSQRH 81
Query: 408 VTADLW 391
T W
Sbjct: 80 QTVAQW 63
>gb|AC005824.3| Arabidopsis thaliana chromosome 2 clone F15K20 map B68, complete
sequence
Length = 118196
Score = 113 bits (242), Expect(6) = 5e-081
Identities = 46/69 (66%), Positives = 54/69 (78%)
Frame = -2 / -1
Query: 880 YRDGVSEGQFYQVLLYELDAIRKACASLESDYQPPVTFVVVQKRHHTRLFVNNHNDQRAA 701
Y DGVSEGQF QVLL+E+ AIRKAC SL+ +Y P VTFV+VQKRHHTRLF H ++
Sbjct: 3803 YSDGVSEGQFSQVLLHEMTAIRKACNSLQENYVPRVTFVIVQKRHHTRLFPEQHGNRDMT 3624
Query: 700 DRSGNILPG 674
D+SGNI PG
Sbjct: 3623 DKSGNIQPG 3597
Score = 83.1 bits (175), Expect(6) = 5e-081
Identities = 33/45 (73%), Positives = 39/45 (86%)
Frame = -2 / -3
Query: 505 YARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGATTS 371
YARCT+SVSIVPPAYYAHLAAFRAR+YME + SD GS S ++T+
Sbjct: 3171 YARCTKSVSIVPPAYYAHLAAFRARYYMESEMSDGGSSRSRSSTT 3037
Score = 70.7 bits (148), Expect(6) = 5e-081
Identities = 28/32 (87%), Positives = 28/32 (87%)
Frame = -2 / -3
Query: 601 GTSRPAHYHVLWDENKFTADGLQTLTNNLCYT 506
GTSRPAHYHVL DEN FTAD LQ LTNNLCYT
Sbjct: 3354 GTSRPAHYHVLLDENGFTADQLQMLTNNLCYT 3259
Score = 59.7 bits (124), Expect(6) = 5e-081
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = -2 / -1
Query: 682 LPGTVVDSKICHPTEFDFYLCSHAGIQ 602
L GTVVD+KICHP EFDFYL SHAGIQ
Sbjct: 3521 LSGTVVDTKICHPNEFDFYLNSHAGIQ 3441
Score = 35.9 bits (72), Expect(6) = 5e-081
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = -2 / -3
Query: 316 VRPLPALKENVKRVMFYC* 260
+ LPA+K+NVK VMFYC*
Sbjct: 3021 ISQLPAIKDNVKEVMFYC* 2965
Score = 34.5 bits (69), Expect(6) = 5e-081
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -2 / -2
Query: 928 ISFWRATGQKPKRIIFYR 875
I+F RATGQ P+RIIFYR
Sbjct: 3928 IAFRRATGQIPQRIIFYR 3875
>gb|AC006929.4| Arabidopsis thaliana chromosome 2 clone T1E2 map mi54, complete
sequence
Length = 94884
Score = 113 bits (242), Expect(6) = 5e-081
Identities = 46/69 (66%), Positives = 54/69 (78%)
Frame = -2 / -1
Query: 880 YRDGVSEGQFYQVLLYELDAIRKACASLESDYQPPVTFVVVQKRHHTRLFVNNHNDQRAA 701
Y DGVSEGQF QVLL+E+ AIRKAC SL+ +Y P VTFV+VQKRHHTRLF H ++
Sbjct: 85146 YSDGVSEGQFSQVLLHEMTAIRKACNSLQENYVPRVTFVIVQKRHHTRLFPEQHGNRDMT 84967
Query: 700 DRSGNILPG 674
D+SGNI PG
Sbjct: 84966 DKSGNIQPG 84940
Score = 83.1 bits (175), Expect(6) = 5e-081
Identities = 33/45 (73%), Positives = 39/45 (86%)
Frame = -2 / -3
Query: 505 YARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGATTS 371
YARCT+SVSIVPPAYYAHLAAFRAR+YME + SD GS S ++T+
Sbjct: 84514 YARCTKSVSIVPPAYYAHLAAFRARYYMESEMSDGGSSRSRSSTT 84380
Score = 70.7 bits (148), Expect(6) = 5e-081
Identities = 28/32 (87%), Positives = 28/32 (87%)
Frame = -2 / -3
Query: 601 GTSRPAHYHVLWDENKFTADGLQTLTNNLCYT 506
GTSRPAHYHVL DEN FTAD LQ LTNNLCYT
Sbjct: 84697 GTSRPAHYHVLLDENGFTADQLQMLTNNLCYT 84602
Score = 59.7 bits (124), Expect(6) = 5e-081
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = -2 / -1
Query: 682 LPGTVVDSKICHPTEFDFYLCSHAGIQ 602
L GTVVD+KICHP EFDFYL SHAGIQ
Sbjct: 84864 LSGTVVDTKICHPNEFDFYLNSHAGIQ 84784
Score = 35.9 bits (72), Expect(6) = 5e-081
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = -2 / -3
Query: 316 VRPLPALKENVKRVMFYC* 260
+ LPA+K+NVK VMFYC*
Sbjct: 84364 ISQLPAIKDNVKEVMFYC* 84308
Score = 34.5 bits (69), Expect(6) = 5e-081
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -2 / -2
Query: 928 ISFWRATGQKPKRIIFYR 875
I+F RATGQ P+RIIFYR
Sbjct: 85271 IAFRRATGQIPQRIIFYR 85218
>gb|CA781259.1|CA781259 014A08AF Infected Arabidopsis Leaf Arabidopsis thaliana cDNA, mRNA
sequence
Length = 569
Score = 290 bits (627), Expect(2) = 3e-080
Identities = 114/130 (87%), Positives = 121/130 (93%)
Frame = -2 / +2
Query: 937 NLLISFWRATGQKPKRIIFYRDGVSEGQFYQVLLYELDAIRKACASLESDYQPPVTFVVV 758
+LLISF +ATGQKP RIIFYRDGVSEGQFYQVLLYELDAIRKACASLE +YQPPVTF+VV
Sbjct: 179 DLLISFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVV 358
Query: 757 QKRHHTRLFVNNHNDQRAADRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHY 578
QKRHHTRLF NNH D+ + DRSGNILPGTVVD+KICHPTEFDFYLCSHAGIQGTSRP HY
Sbjct: 359 QKRHHTRLFANNHRDKNSTDRSGNILPGTVVDTKICHPTEFDFYLCSHAGIQGTSRPGHY 538
Query: 577 HVLWDENKFT 548
HVLWDEN FT
Sbjct: 539 HVLWDENNFT 568
Score = 105 bits (224), Expect = 2e-021
Identities = 49/130 (37%), Positives = 81/130 (62%)
Frame = +2 / -2
Query: 551 KFVLIPQNMIMGRTACSLNASMAAQVEIKLGWMANL*VHHSARQYVATSIGSTLIIVIIN 730
+ VL+P+NM+M R ACSLN MA +VE++ WM V++S ++ S+ + + VII+
Sbjct: 565 EIVLVPKNMVMSRPACSLNTRMATKVEVEFSWMTYFSVNYSTW*DISASVSTVFVSVIIS 386
Query: 731 KQPGVMTLLDHDKSNWRLVIRLQ*CTGLSNGIKFVQQNLVELSLTDTIPVEYDPLGFLSS 910
KQ V+TLL + + + L+IR + CT LSN I+ ++ NL+EL +I ++ + FL
Sbjct: 385 KQTSVVTLLYNYECHRWLIIRFKRCTSLSNCIQLIE*NLIELPFAYSITIKDNSKRFLPC 206
Query: 911 RPPERNEKVP 940
+ ++KVP
Sbjct: 205 CFSK*DKKVP 176
Score = 82.2 bits (173), Expect(4) = 4e-031
Identities = 40/63 (63%), Positives = 47/63 (74%)
Frame = +3 / -3
Query: 747 *RFWTTTKVTGGW*SDSNDAQAFLMASSSYNRTW*NCPSLTPSL*NMILLGFCPVALQKE 926
*RF TT VTGG * S+DAQAF +AS+S ++T *NCPSLTPS * +I GFCPVA E
Sbjct: 369 *RFCTTMNVTGG**FGSSDAQAFRIASNS*SKT**NCPSLTPSR*KIIRSGFCPVAFLNE 190
Query: 927 MRR 935
+RR
Sbjct: 189 IRR 181
Score = 66.1 bits (138), Expect(4) = 4e-031
Identities = 32/46 (69%), Positives = 34/46 (73%)
Frame = +3 / -3
Query: 549 VNLFSSHRT**WAGRLVP*MPAWLHR*KSNSVGWQIFESTTVPGSM 686
V LFSS RT * G LVP*+PAWL R*KSNSVG I STTVPG +
Sbjct: 567 VKLFSSQRTW*CPGLLVP*IPAWLQR*KSNSVG*HILVSTTVPGKI 430
Score = 31.8 bits (63), Expect(2) = 3e-080
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -1 / +2
Query: 977 DPQRGTVSGGMIRE 936
DP RGTVSGGMIR+
Sbjct: 140 DPVRGTVSGGMIRD 181
Score = 22.6 bits (43), Expect(4) = 4e-031
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1 / -1
Query: 721 DY*QTTWCDDAS 756
DY*QT C DAS
Sbjct: 395 DY*QTNECGDAS 360
Score = 22.1 bits (42), Expect(4) = 4e-031
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +1 / -3
Query: 937 SLIMPPETVPLWG 975
SLI+PP TVP G
Sbjct: 180 SLIIPPLTVPRTG 142
>gb|AV441187.1|AV441187 AV441187 Arabidopsis thaliana above-ground organ two to six-week
old Arabidopsis thaliana cDNA clone APZ31g03_f 3', mRNA
sequence
Length = 607
Score = 294 bits (636), Expect(2) = 8e-080
Identities = 115/133 (86%), Positives = 121/133 (90%)
Frame = -2 / -2
Query: 751 RHHTRLFVNNHNDQRAADRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHV 572
RHHTRLF NHND+ + DRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHV
Sbjct: 606 RHHTRLFAQNHNDRHSVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHV 427
Query: 571 LWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSV 392
LWDEN FTADGLQ+LTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEP+TSDSGS+
Sbjct: 426 LWDENNFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSM 247
Query: 391 ASGATTSRGPPPG 353
ASG+ G G
Sbjct: 246 ASGSMARGGGMAG 208
Score = 145 bits (312), Expect(2) = 5e-037
Identities = 73/111 (65%), Positives = 79/111 (71%)
Frame = +3 / +2
Query: 354 PGGGPRLVVAPLATDPLSLVSGSM*NXXXXXXXXXXXXGGTIDTERVHLAYV*HKLLVRV 533
P P + PLA +PLS VSGSM*N GGTI+TERVHLAYV*HKLLVR
Sbjct: 209 PAIPPPRAMLPLAIEPLSDVSGSM*NRALKAARCA*YAGGTIETERVHLAYV*HKLLVRD 388
Query: 534 CNPSAVNLFSSHRT**WAGRLVP*MPAWLHR*KSNSVGWQIFESTTVPGSM 686
+PSAV LFSS RT * AGR VP*+PA L R*KSNSVGWQI ESTTVPG +
Sbjct: 389 *SPSAVKLFSSQRTW**AGREVP*IPA*LQR*KSNSVGWQILESTTVPGKI 541
Score = 137 bits (293), Expect = 7e-031
Identities = 62/138 (44%), Positives = 89/138 (64%)
Frame = +2 / +1
Query: 338 PGVARPWWRATACRSTARHRSAVTCIWLHVKPSSEGCQMSIVCRRND*Y*ACAPGIRVTQ 517
P A + C + H + V C+WLHV+ S + C M I+CR N+* *ACA IRVT
Sbjct: 193 PACASTSHSTSTCHAPTSH*ATV*CLWLHVESSPKSC*MCIICRGNN*N*ACASCIRVT* 372
Query: 518 VVGESLQPISRKFVLIPQNMIMGRTACSLNASMAAQVEIKLGWMANL*VHHSARQYVATS 697
V+G+ L+ I K VLIP+N++M R+ +LN SM +V++KL +A+ VH+SAR + TS
Sbjct: 373 VIGQRLKSICSKVVLIPKNVVMSRSRSALNTSMTTEVKVKLCRVADFRVHNSAR*NIPTS 552
Query: 698 IGSTLIIVIINKQPGVMT 751
+ IIV+++KQP VMT
Sbjct: 553 VHRMAIIVVLSKQPCVMT 606
Score = 133 bits (284), Expect(2) = 8e-042
Identities = 60/113 (53%), Positives = 76/113 (67%)
Frame = -1 / -1
Query: 752 ASSHQVVC**SQ*SACCR*KWQHTAGHCGGLKDLPSNRV*FLPVQPCWHSGNKPSCPLSC 573
ASSH+ VC Q*S KW++ HC GL +LP RV* LP+ CW+SG+ +C L
Sbjct: 607 ASSHKAVCSEPQ*SPFGGQKWEYFTWHCCGL*NLPPYRV*LLPL*SCWYSGHFSTCSLPR 428
Query: 572 SVG*EQIYG*WVANSHQQLVLHVCQVHTLSINRSSCILCSSGSLPSSVLHGAR 414
S+G*EQ+Y W + S Q L+LHVC++HTLS N S CILC+S S S+LHGAR
Sbjct: 427 SLG*EQLYCRWTSISDQ*LMLHVCKMHTLSFNCSPCILCTSSSF*GSILHGAR 269
Score = 122 bits (262), Expect(2) = 2e-033
Identities = 56/120 (46%), Positives = 65/120 (54%)
Frame = +1 / +3
Query: 391 PQIRCHLYLAPCKTELGRLPDEHSMQEERLILSVCTWHTCNTSCW*EFATHQP*ICSHPT 570
P C + LAPC+ E +L D H+MQ E+L LSVC HTCN S W E H * CSHP
Sbjct: 246 PLSHCLMSLAPCRIEP*KLLDVHNMQGEQLKLSVCILHTCNISYWSEIEVHLQ*SCSHPK 425
Query: 571 EHDNGQDGLFPECQHGCTGRNQTRLDGKSLSPPQCPAVCCHFYRQHADHCDY*QTTWCDD 750
E N Q PE QH G++QT G+ SP QC HF + DHC QT CDD
Sbjct: 426 ERGNEQVEKCPEYQHDYRGKSQTL*GGRF*SPQQCQVKYSHFCPPNGDHCGSEQTALCDD 605
Score = 104 bits (221), Expect(2) = 1e-022
Identities = 58/120 (48%), Positives = 63/120 (52%)
Frame = -3 / -3
Query: 750 VITPGCLLIITMISVLPIEVATYCRALWWTQRFAIQPSLISTCAAMLAFREQAVLPIIMF 571
VIT GCLL TMI++ EV + AL WT + A SL T ML FR L I F
Sbjct: 605 VITQGCLLRTTMIAIRWTEVGIFYLALLWTLKSATLQSLTFTSVVMLVFRALLDLLITTF 426
Query: 570 CGMRTNLRLMGCKLSPTTCVTRMPGAHAQYQSFLLHTMLIWQPSELGFTWSQIQVTADLW 391
GMRT L M L P T VTRM AHAQ+Q F LH M I Q L TWSQ T W
Sbjct: 425 FGMRTTLLQMDFNL*PITYVTRMQDAHAQFQLFPLHIMHI*QLLGLDSTWSQRHQTVAQW 246
Score = 60.6 bits (126), Expect(2) = 8e-042
Identities = 26/43 (60%), Positives = 30/43 (69%)
Frame = -2 / -2
Query: 388 SGATTSRGPPPGARNTRAGAANVAVRPLPALKENVKRVMFYC* 260
+ + +RG R+TR N AVRPLPALKENVKRVMFYC*
Sbjct: 246 ASGSMARGGGMAGRSTRGPNVNAAVRPLPALKENVKRVMFYC* 118
Score = 42.3 bits (86), Expect(2) = 2e-033
Identities = 21/39 (53%), Positives = 24/39 (61%)
Frame = +3 / +2
Query: 264 Q*NMTRFTFSLRAGNGLTATFAAPALVLRAPGGGPRLVV 380
Q*NMTRFTFS RAG+GLTA VL PR ++
Sbjct: 122 Q*NMTRFTFSFRAGSGLTAALTLGPRVLLPAIPPPRAML 238
Score = 31.8 bits (63), Expect(2) = 5e-037
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2 / +1
Query: 266 VEHDALHVFLEGR*WPHSNI 325
VEHD LH+ + WPH +I
Sbjct: 124 VEHDTLHILFQSWEWPHCSI 183
Score = 26.3 bits (51), Expect(2) = 8e-080
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -3 / -3
Query: 333 VLQMLL*GHYLPSRKT*SASCSTAKI 256
++ ML *GH ++ *S SCSTA++
Sbjct: 191 LMSMLQ*GHSQL*KRM*SVSCSTAEL 114
Score = 24.9 bits (48), Expect(2) = 1e-022
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1 / -1
Query: 329 CKCCCEAITCPQGKREARHV 270
C+CC EA + + EA HV
Sbjct: 187 CQCCSEATPSSERECEACHV 128
>gb|BE523184.1|BE523184 M35A4STM Arabidopsis developing seed Arabidopsis thaliana cDNA
clone M35A4 5', mRNA sequence
Length = 394
Score = 296 bits (640), Expect = 9e-079
Identities = 117/128 (91%), Positives = 121/128 (94%)
Frame = -2 / +1
Query: 901 KPKRIIFYRDGVSEGQFYQVLLYELDAIRKACASLESDYQPPVTFVVVQKRHHTRLFVNN 722
KP RIIFYRDGVSEGQFYQVLLYELDAIRKACASLE+ YQPPVTFVVVQKRHHTRLF N
Sbjct: 10 KPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEAGYQPPVTFVVVQKRHHTRLFAQN 189
Query: 721 HNDQRAADRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTAD 542
HND+ + DRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDEN FTAD
Sbjct: 190 HNDRHSVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTAD 369
Query: 541 GLQTLTNN 518
GLQ+LTNN
Sbjct: 370 GLQSLTNN 393
Score = 152 bits (327), Expect = 1e-035
Identities = 67/130 (51%), Positives = 95/130 (73%)
Frame = +2 / -2
Query: 518 VVGESLQPISRKFVLIPQNMIMGRTACSLNASMAAQVEIKLGWMANL*VHHSARQYVATS 697
V+G+ L+ I K VLIP+N++M R+ +LN SM +V++KL +A+ VH+SAR + TS
Sbjct: 393 VIGQRLKSICSKVVLIPKNVVMSRSRSALNTSMTTEVKVKLCRVADFRVHNSAR*NIPTS 214
Query: 698 IGSTLIIVIINKQPGVMTLLDHDKSNWRLVIRLQ*CTGLSNGIKFVQQNLVELSLTDTIP 877
+ IIV+++KQP VMTLL H K +W L+ Q TGL++GIKF++QNLV+LSLTD+IP
Sbjct: 213 VHRMAIIVVLSKQPRVMTLLHHHKCHWWLITCFQRSTGLADGIKFIEQNLVKLSLTDSIP 34
Query: 878 VEYDPLGFLS 907
VE DP F+S
Sbjct: 33 VEDDP*WFIS 4
Score = 140 bits (301), Expect = 5e-032
Identities = 64/126 (50%), Positives = 81/126 (64%)
Frame = -1 / +3
Query: 899 TQEDHILQGWCQ*GTVLPSSVVRT*CH*KGLCIIGV*LPASSYFCRGPEASSHQVVC**S 720
T +DH+LQGW Q*GT+LPS + T*CH +GLC G L +S C G EASSH+ VC
Sbjct: 12 TTKDHLLQGWSQ*GTILPSFAL*T*CHPQGLCFAGSRLSTTSDICGGAEASSHEAVCSEP 191
Query: 719 Q*SACCR*KWQHTAGHCGGLKDLPSNRV*FLPVQPCWHSGNKPSCPLSCSVG*EQIYG*W 540
Q*S KW++ HC GL +LP RV* LP+ CW+SG+ +C L S+G*EQ+Y W
Sbjct: 192 Q*SPFGGQKWEYFTWHCCGL*NLPPYRV*LLPL*SCWYSGHFSTCSLPRSLG*EQLYCRW 371
Query: 539 VANSHQ 522
+ S Q
Sbjct: 372 TSISDQ 389
Score = 130 bits (279), Expect = 6e-029
Identities = 61/130 (46%), Positives = 69/130 (53%)
Frame = +1 / -1
Query: 517 SCW*EFATHQP*ICSHPTEHDNGQDGLFPECQHGCTGRNQTRLDGKSLSPPQCPAVCCHF 696
S W E H * CSHP E N Q PE QH G++QT G+ SP QC HF
Sbjct: 394 SYWSEIEVHLQ*SCSHPKERGNEQVEKCPEYQHDYRGKSQTL*GGRF*SPQQCQVKYSHF 215
Query: 697 YRQHADHCDY*QTTWCDDASGPRQK*LEAGNQTPMMHRPF*WHQVRTTELGRTVPH*HHP 876
+ DHC QT CDDAS P Q L N P HRP WHQV +LG+ VPH* HP
Sbjct: 214 CPPNGDHCGSEQTASCDDASAPPQMSLVVDNLLPAKHRPCGWHQVHRAKLGKIVPH*LHP 35
Query: 877 CRI*SSWVFV 906
CR *S V++
Sbjct: 34 CRR*SLVVYL 5
Score = 120 bits (257), Expect = 6e-026
Identities = 63/125 (50%), Positives = 70/125 (56%)
Frame = -3 / +2
Query: 891 GSYSTGMVSVRDSSTKFCCTNLMPLERPVHHWSLITSLQLLLSWSRSVITPGCLLIITMI 712
GS STGM SVRD+ TKFC NLMP RPV W + + Q L W RSVIT GCLL TMI
Sbjct: 20 GSSSTGMESVRDNFTKFCSMNLMPSARPVLRWKQVINHQ*HLWWCRSVITRGCLLRTTMI 199
Query: 711 SVLPIEVATYCRALWWTQRFAIQPSLISTCAAMLAFREQAVLPIIMFCGMRTNLRLMGCK 532
++ EV + AL WT + A SL T ML FR L I F GMRT L M
Sbjct: 200 AIRWTEVGIFYLALLWTLKSATLQSLTFTSVVMLVFRALLDLLITTFFGMRTTLLQMDFN 379
Query: 531 LSPTT 517
L P T
Sbjct: 380 L*PIT 394
Score = 84.9 bits (179), Expect(2) = 3e-033
Identities = 42/56 (75%), Positives = 45/56 (80%)
Frame = +3 / -3
Query: 519 LLVRVCNPSAVNLFSSHRT**WAGRLVP*MPAWLHR*KSNSVGWQIFESTTVPGSM 686
LLVR +PSAV LFSS RT * AGR VP*+PA L R*KSNSVGWQI ESTTVPG +
Sbjct: 392 LLVRD*SPSAVKLFSSQRTW**AGREVP*IPA*LQR*KSNSVGWQILESTTVPGKI 225
Score = 79.9 bits (168), Expect(2) = 3e-033
Identities = 39/53 (73%), Positives = 43/53 (81%)
Frame = +3 / -3
Query: 741 V**RFWTTTKVTGGW*SDSNDAQAFLMASSSYNRTW*NCPSLTPSL*NMILLG 899
V**RF TTT VTGG * S++AQA MASSS ++TW*NCPSLTPSL* MIL G
Sbjct: 170 V**RFCTTTNVTGG**PASSEAQALRMASSS*SKTW*NCPSLTPSL*KMILSG 12
>gb|AV563657.1|AV563657 AV563657 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ191b06F 3', mRNA sequence
Length = 601
Score = 278 bits (601), Expect(2) = 5e-075
Identities = 109/127 (85%), Positives = 115/127 (90%)
Frame = -2 / -3
Query: 733 FVNNHNDQRAADRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENK 554
F NHND+ + DRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDEN
Sbjct: 599 FAQNHNDRHSVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENN 420
Query: 553 FTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGATT 374
FTADGLQ+LTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEP+TSDSGS+ASG+
Sbjct: 419 FTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMASGSMA 240
Query: 373 SRGPPPG 353
G G
Sbjct: 239 RGGGMAG 219
Score = 145 bits (312), Expect(2) = 5e-037
Identities = 73/111 (65%), Positives = 79/111 (71%)
Frame = +3 / +1
Query: 354 PGGGPRLVVAPLATDPLSLVSGSM*NXXXXXXXXXXXXGGTIDTERVHLAYV*HKLLVRV 533
P P + PLA +PLS VSGSM*N GGTI+TERVHLAYV*HKLLVR
Sbjct: 220 PAIPPPRAMLPLAIEPLSDVSGSM*NRALKAARCA*YAGGTIETERVHLAYV*HKLLVRD 399
Query: 534 CNPSAVNLFSSHRT**WAGRLVP*MPAWLHR*KSNSVGWQIFESTTVPGSM 686
+PSAV LFSS RT * AGR VP*+PA L R*KSNSVGWQI ESTTVPG +
Sbjct: 400 *SPSAVKLFSSQRTW**AGREVP*IPA*LQR*KSNSVGWQILESTTVPGKI 552
Score = 126 bits (270), Expect = 1e-027
Identities = 57/132 (43%), Positives = 84/132 (63%)
Frame = +2 / +3
Query: 338 PGVARPWWRATACRSTARHRSAVTCIWLHVKPSSEGCQMSIVCRRND*Y*ACAPGIRVTQ 517
P A + C + H + V C+WLHV+ S + C M I+CR N+* *ACA IRVT
Sbjct: 204 PACASTSHSTSTCHAPTSH*ATV*CLWLHVESSPKSC*MCIICRGNN*N*ACASCIRVT* 383
Query: 518 VVGESLQPISRKFVLIPQNMIMGRTACSLNASMAAQVEIKLGWMANL*VHHSARQYVATS 697
V+G+ L+ I K VLIP+N++M R+ +LN SM +V++KL +A+ VH+SAR + TS
Sbjct: 384 VIGQRLKSICSKVVLIPKNVVMSRSRSALNTSMTTEVKVKLCRVADFRVHNSAR*NIPTS 563
Query: 698 IGSTLIIVIINK 733
+ IIV+++K
Sbjct: 564 VHRMAIIVVLSK 599
Score = 123 bits (263), Expect(2) = 6e-039
Identities = 56/107 (52%), Positives = 71/107 (66%)
Frame = -1 / -2
Query: 734 VC**SQ*SACCR*KWQHTAGHCGGLKDLPSNRV*FLPVQPCWHSGNKPSCPLSCSVG*EQ 555
VC Q*S KW++ HC GL +LP RV* LP+ CW+SG+ +C L S+G*EQ
Sbjct: 600 VCSEPQ*SPFGGQKWEYFTWHCCGL*NLPPYRV*LLPL*SCWYSGHFSTCSLPRSLG*EQ 421
Query: 554 IYG*WVANSHQQLVLHVCQVHTLSINRSSCILCSSGSLPSSVLHGAR 414
+Y W + S Q L+LHVC++HTLS N S CILC+S S S+LHGAR
Sbjct: 420 LYCRWTSISDQ*LMLHVCKMHTLSFNCSPCILCTSSSF*GSILHGAR 280
Score = 114 bits (243), Expect(2) = 9e-031
Identities = 53/115 (46%), Positives = 62/115 (53%)
Frame = +1 / +2
Query: 391 PQIRCHLYLAPCKTELGRLPDEHSMQEERLILSVCTWHTCNTSCW*EFATHQP*ICSHPT 570
P C + LAPC+ E +L D H+MQ E+L LSVC HTCN S W E H * CSHP
Sbjct: 257 PLSHCLMSLAPCRIEP*KLLDVHNMQGEQLKLSVCILHTCNISYWSEIEVHLQ*SCSHPK 436
Query: 571 EHDNGQDGLFPECQHGCTGRNQTRLDGKSLSPPQCPAVCCHFYRQHADHCDY*QT 735
E N Q PE QH G++QT G+ SP QC HF + DHC QT
Sbjct: 437 ERGNEQVEKCPEYQHDYRGKSQTL*GGRF*SPQQCQVKYSHFCPPNGDHCGSEQT 601
Score = 60.6 bits (126), Expect(2) = 6e-039
Identities = 26/43 (60%), Positives = 30/43 (69%)
Frame = -2 / -3
Query: 388 SGATTSRGPPPGARNTRAGAANVAVRPLPALKENVKRVMFYC* 260
+ + +RG R+TR N AVRPLPALKENVKRVMFYC*
Sbjct: 257 ASGSMARGGGMAGRSTRGPNVNAAVRPLPALKENVKRVMFYC* 129
Score = 42.3 bits (86), Expect(2) = 9e-031
Identities = 21/39 (53%), Positives = 24/39 (61%)
Frame = +3 / +1
Query: 264 Q*NMTRFTFSLRAGNGLTATFAAPALVLRAPGGGPRLVV 380
Q*NMTRFTFS RAG+GLTA VL PR ++
Sbjct: 133 Q*NMTRFTFSFRAGSGLTAALTLGPRVLLPAIPPPRAML 249
Score = 31.8 bits (63), Expect(2) = 5e-037
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2 / +3
Query: 266 VEHDALHVFLEGR*WPHSNI 325
VEHD LH+ + WPH +I
Sbjct: 135 VEHDTLHILFQSWEWPHCSI 194
Score = 26.3 bits (51), Expect(2) = 5e-075
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -3 / -1
Query: 333 VLQMLL*GHYLPSRKT*SASCSTAKI 256
++ ML *GH ++ *S SCSTA++
Sbjct: 202 LMSMLQ*GHSQL*KRM*SVSCSTAEL 125
>gb|AV545970.1|AV545970 AV545970 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZL06e02F 3', mRNA sequence
Length = 575
Score = 263 bits (568), Expect(2) = 2e-070
Identities = 104/118 (88%), Positives = 109/118 (92%)
Frame = -2 / -1
Query: 706 AADRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTL 527
+ DRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDEN FTADGLQ+L
Sbjct: 572 SVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSL 393
Query: 526 TNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGATTSRGPPPG 353
TNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEP+TSDSGS+ASG+ G G
Sbjct: 392 TNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMASGSMARGGGMAG 219
Score = 145 bits (312), Expect(2) = 5e-037
Identities = 73/111 (65%), Positives = 79/111 (71%)
Frame = +3 / +1
Query: 354 PGGGPRLVVAPLATDPLSLVSGSM*NXXXXXXXXXXXXGGTIDTERVHLAYV*HKLLVRV 533
P P + PLA +PLS VSGSM*N GGTI+TERVHLAYV*HKLLVR
Sbjct: 220 PAIPPPRAMLPLAIEPLSDVSGSM*NRALKAARCA*YAGGTIETERVHLAYV*HKLLVRD 399
Query: 534 CNPSAVNLFSSHRT**WAGRLVP*MPAWLHR*KSNSVGWQIFESTTVPGSM 686
+PSAV LFSS RT * AGR VP*+PA L R*KSNSVGWQI ESTTVPG +
Sbjct: 400 *SPSAVKLFSSQRTW**AGREVP*IPA*LQR*KSNSVGWQILESTTVPGKI 552
Score = 122 bits (261), Expect(2) = 1e-038
Identities = 51/94 (54%), Positives = 66/94 (70%)
Frame = -1 / -3
Query: 695 KWQHTAGHCGGLKDLPSNRV*FLPVQPCWHSGNKPSCPLSCSVG*EQIYG*WVANSHQQL 516
KW++ HC GL +LP RV* LP+ CW+SG+ +C L S+G*EQ+Y W + S Q L
Sbjct: 561 KWEYFTWHCCGL*NLPPYRV*LLPL*SCWYSGHFSTCSLPRSLG*EQLYCRWTSISDQ*L 382
Query: 515 VLHVCQVHTLSINRSSCILCSSGSLPSSVLHGAR 414
+LHVC++HTLS N S CILC+S S S+LHGAR
Sbjct: 381 MLHVCKMHTLSFNCSPCILCTSSSF*GSILHGAR 280
Score = 118 bits (252), Expect = 3e-025
Identities = 53/121 (43%), Positives = 77/121 (63%)
Frame = +2 / +3
Query: 338 PGVARPWWRATACRSTARHRSAVTCIWLHVKPSSEGCQMSIVCRRND*Y*ACAPGIRVTQ 517
P A + C + H + V C+WLHV+ S + C M I+CR N+* *ACA IRVT
Sbjct: 204 PACASTSHSTSTCHAPTSH*ATV*CLWLHVESSPKSC*MCIICRGNN*N*ACASCIRVT* 383
Query: 518 VVGESLQPISRKFVLIPQNMIMGRTACSLNASMAAQVEIKLGWMANL*VHHSARQYVATS 697
V+G+ L+ I K VLIP+N++M R+ +LN SM +V++KL +A+ VH+SAR + TS
Sbjct: 384 VIGQRLKSICSKVVLIPKNVVMSRSRSALNTSMTTEVKVKLCRVADFRVHNSAR*NIPTS 563
Query: 698 I 700
+
Sbjct: 564 V 566
Score = 104 bits (221), Expect(2) = 9e-028
Identities = 48/102 (47%), Positives = 56/102 (54%)
Frame = +1 / +2
Query: 391 PQIRCHLYLAPCKTELGRLPDEHSMQEERLILSVCTWHTCNTSCW*EFATHQP*ICSHPT 570
P C + LAPC+ E +L D H+MQ E+L LSVC HTCN S W E H * CSHP
Sbjct: 257 PLSHCLMSLAPCRIEP*KLLDVHNMQGEQLKLSVCILHTCNISYWSEIEVHLQ*SCSHPK 436
Query: 571 EHDNGQDGLFPECQHGCTGRNQTRLDGKSLSPPQCPAVCCHF 696
E N Q PE QH G++QT G+ SP QC HF
Sbjct: 437 ERGNEQVEKCPEYQHDYRGKSQTL*GGRF*SPQQCQVKYSHF 562
Score = 60.6 bits (126), Expect(2) = 1e-038
Identities = 26/43 (60%), Positives = 30/43 (69%)
Frame = -2 / -1
Query: 388 SGATTSRGPPPGARNTRAGAANVAVRPLPALKENVKRVMFYC* 260
+ + +RG R+TR N AVRPLPALKENVKRVMFYC*
Sbjct: 257 ASGSMARGGGMAGRSTRGPNVNAAVRPLPALKENVKRVMFYC* 129
Score = 42.3 bits (86), Expect(2) = 9e-028
Identities = 21/39 (53%), Positives = 24/39 (61%)
Frame = +3 / +1
Query: 264 Q*NMTRFTFSLRAGNGLTATFAAPALVLRAPGGGPRLVV 380
Q*NMTRFTFS RAG+GLTA VL PR ++
Sbjct: 133 Q*NMTRFTFSFRAGSGLTAALTLGPRVLLPAIPPPRAML 249
Score = 31.8 bits (63), Expect(2) = 5e-037
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2 / +3
Query: 266 VEHDALHVFLEGR*WPHSNI 325
VEHD LH+ + WPH +I
Sbjct: 135 VEHDTLHILFQSWEWPHCSI 194
Score = 26.3 bits (51), Expect(2) = 2e-070
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -3 / -2
Query: 333 VLQMLL*GHYLPSRKT*SASCSTAKI 256
++ ML *GH ++ *S SCSTA++
Sbjct: 202 LMSMLQ*GHSQL*KRM*SVSCSTAEL 125
>gb|CD534067.1|CD534067 35F4 Arabidopsis Leaf Senescence Library Arabidopsis thaliana cDNA
3', mRNA sequence
Length = 420
Score = 237 bits (511), Expect(2) = 3e-064
Identities = 94/108 (87%), Positives = 101/108 (93%)
Frame = -2 / +1
Query: 937 NLLISFWRATGQKPKRIIFYRDGVSEGQFYQVLLYELDAIRKACASLESDYQPPVTFVVV 758
+LLISF +ATGQKP RIIFYRDGVSEGQFYQVLLYELDAIRKACASLE +YQPPVTF+VV
Sbjct: 97 DLLISFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVV 276
Query: 757 QKRHHTRLFVNNHNDQRAADRSGNILPGTVVDSKICHPTEFDFYLCSH 614
QKRHHTRLF NNH D+ + DRSGNILPGTVVD+KICHPTEFDFYLCSH
Sbjct: 277 QKRHHTRLFANNHRDKNSTDRSGNILPGTVVDTKICHPTEFDFYLCSH 420
Score = 82.2 bits (173), Expect(4) = 2e-023
Identities = 40/63 (63%), Positives = 47/63 (74%)
Frame = +3 / -2
Query: 747 *RFWTTTKVTGGW*SDSNDAQAFLMASSSYNRTW*NCPSLTPSL*NMILLGFCPVALQKE 926
*RF TT VTGG * S+DAQAF +AS+S ++T *NCPSLTPS * +I GFCPVA E
Sbjct: 287 *RFCTTMNVTGG**FGSSDAQAFRIASNS*SKT**NCPSLTPSR*KIIRSGFCPVAFLNE 108
Query: 927 MRR 935
+RR
Sbjct: 107 IRR 99
Score = 39.6 bits (80), Expect(4) = 2e-023
Identities = 17/24 (70%), Positives = 18/24 (75%)
Frame = +3 / -2
Query: 615 WLHR*KSNSVGWQIFESTTVPGSM 686
WL R*KSNSVG I STTVPG +
Sbjct: 419 WLQR*KSNSVG*HILVSTTVPGKI 348
Score = 31.8 bits (63), Expect(2) = 3e-064
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -1 / +1
Query: 977 DPQRGTVSGGMIRE 936
DP RGTVSGGMIR+
Sbjct: 58 DPVRGTVSGGMIRD 99
Score = 22.6 bits (43), Expect(4) = 2e-023
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1 / -3
Query: 721 DY*QTTWCDDAS 756
DY*QT C DAS
Sbjct: 313 DY*QTNECGDAS 278
Score = 22.1 bits (42), Expect(4) = 2e-023
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +1 / -2
Query: 937 SLIMPPETVPLWG 975
SLI+PP TVP G
Sbjct: 98 SLIIPPLTVPRTG 60
>gb|AC073178.9|AC073178 Arabidopsis thaliana chromosome 1 BAC F10D13 genomic sequence, complete
sequence
Length = 107214
Score = 188 bits (404), Expect(3) = 4e-062
Identities = 70/111 (63%), Positives = 86/111 (77%)
Frame = -2 / -2
Query: 688 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCY 509
NI PGTVVD+ I HP EFDFYLCSH G++GTSRP HYH+LWDEN+FT+D LQ L NLCY
Sbjct: 45278 NIPPGTVVDTVITHPKEFDFYLCSHLGVKGTSRPTHYHILWDENEFTSDELQRLVYNLCY 45099
Query: 508 TYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGATTSRGPPP 356
T+ RCT+ +SIVPPAYYAHLAA+R R Y+E + +G + ++ SR PP
Sbjct: 45098 TFVRCTKPISIVPPAYYAHLAAYRGRLYIERSSESNGGSMNPSSVSRVGPP 44946
Score = 93.2 bits (197), Expect(2) = 5e-023
Identities = 46/73 (63%), Positives = 47/73 (64%)
Frame = +3 / +1
Query: 468 GGTIDTERVHLAYV*HKLLVRVCNPSAVNLFSSHRT**WAGRLVP*MPAWLHR*KSNSVG 647
GGTID VHL V*HKL +CN S VN FSSHR * G LVP P WL R*KSNS G
Sbjct: 45058 GGTIDIGFVHLTKV*HKLYTSLCNSSEVNSFSSHRIW*CVGLLVPFTPKWLQR*KSNSFG 45237
Query: 648 WQIFESTTVPGSM 686
I STTVPG M
Sbjct: 45238 *VITVSTTVPGGM 45276
Score = 58.3 bits (121), Expect(3) = 4e-062
Identities = 27/63 (42%), Positives = 38/63 (60%)
Frame = -2 / -2
Query: 934 LLISFWRATGQKPKRIIFYRDGVSEGQFYQVLLYELDAIRKACASLESDYQPPVTFVVVQ 755
LL F++A + P RIIF+RDGVSE QF +VL EL +I+ AC+ + VV +
Sbjct: 45500 LLDDFYKAVKKLPNRIIFFRDGVSETQFKKVLQEELQSIKTACSKFQDYNPSITFAVVQK 45321
Query: 754 KRH 746
+ H
Sbjct: 45320 RHH 45312
Score = 37.3 bits (75), Expect(2) = 5e-023
Identities = 23/45 (51%), Positives = 25/45 (55%)
Frame = +3 / +1
Query: 798 NDAQAFLMASSSYNRTW*NCPSLTPSL*NMILLGFCPVALQKEMR 932
N QA + SS RT+ NC SLTPSL NMI G AL K R
Sbjct: 45364 NFEQAVFID*SSSWRTFLNCVSLTPSLKNMIRFGSFFTAL*KSSR 45498
Score = 33.6 bits (67), Expect(3) = 4e-062
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -2 / -2
Query: 310 PLPALKENVKRVMFYC* 260
PLP L +NVK +MFYC*
Sbjct: 44936 PLPKLSDNVKNLMFYC* 44886
>ref|NM_105611.3| Arabidopsis thaliana AGO7 (ARGONAUTE7) AT1G69440 (AGO7) mRNA,
complete cds
Length = 3163
Score = 188 bits (404), Expect(3) = 5e-062
Identities = 70/111 (63%), Positives = 86/111 (77%)
Frame = -2 / +1
Query: 688 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCY 509
NI PGTVVD+ I HP EFDFYLCSH G++GTSRP HYH+LWDEN+FT+D LQ L NLCY
Sbjct: 2731 NIPPGTVVDTVITHPKEFDFYLCSHLGVKGTSRPTHYHILWDENEFTSDELQRLVYNLCY 2910
Query: 508 TYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGATTSRGPPP 356
T+ RCT+ +SIVPPAYYAHLAA+R R Y+E + +G + ++ SR PP
Sbjct: 2911 TFVRCTKPISIVPPAYYAHLAAYRGRLYIERSSESNGGSMNPSSVSRVGPP 3063
Score = 93.2 bits (197), Expect(2) = 5e-023
Identities = 46/73 (63%), Positives = 47/73 (64%)
Frame = +3 / -3
Query: 468 GGTIDTERVHLAYV*HKLLVRVCNPSAVNLFSSHRT**WAGRLVP*MPAWLHR*KSNSVG 647
GGTID VHL V*HKL +CN S VN FSSHR * G LVP P WL R*KSNS G
Sbjct: 2951 GGTIDIGFVHLTKV*HKLYTSLCNSSEVNSFSSHRIW*CVGLLVPFTPKWLQR*KSNSFG 2772
Query: 648 WQIFESTTVPGSM 686
I STTVPG M
Sbjct: 2771 *VITVSTTVPGGM 2733
Score = 58.3 bits (121), Expect(3) = 5e-062
Identities = 27/63 (42%), Positives = 38/63 (60%)
Frame = -2 / +1
Query: 934 LLISFWRATGQKPKRIIFYRDGVSEGQFYQVLLYELDAIRKACASLESDYQPPVTFVVVQ 755
LL F++A + P RIIF+RDGVSE QF +VL EL +I+ AC+ + VV +
Sbjct: 2509 LLDDFYKAVKKLPNRIIFFRDGVSETQFKKVLQEELQSIKTACSKFQDYNPSITFAVVQK 2688
Query: 754 KRH 746
+ H
Sbjct: 2689 RHH 2697
Score = 37.3 bits (75), Expect(2) = 5e-023
Identities = 23/45 (51%), Positives = 25/45 (55%)
Frame = +3 / -3
Query: 798 NDAQAFLMASSSYNRTW*NCPSLTPSL*NMILLGFCPVALQKEMR 932
N QA + SS RT+ NC SLTPSL NMI G AL K R
Sbjct: 2645 NFEQAVFID*SSSWRTFLNCVSLTPSLKNMIRFGSFFTAL*KSSR 2511
Score = 33.6 bits (67), Expect(3) = 5e-062
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -2 / +1
Query: 310 PLPALKENVKRVMFYC* 260
PLP L +NVK +MFYC*
Sbjct: 3073 PLPKLSDNVKNLMFYC* 3123
>gb|AY394564.1| Arabidopsis thaliana ZIPPY mRNA, complete cds
Length = 3161
Score = 188 bits (404), Expect(3) = 5e-062
Identities = 70/111 (63%), Positives = 86/111 (77%)
Frame = -2 / +1
Query: 688 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCY 509
NI PGTVVD+ I HP EFDFYLCSH G++GTSRP HYH+LWDEN+FT+D LQ L NLCY
Sbjct: 2731 NIPPGTVVDTVITHPKEFDFYLCSHLGVKGTSRPTHYHILWDENEFTSDELQRLVYNLCY 2910
Query: 508 TYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGATTSRGPPP 356
T+ RCT+ +SIVPPAYYAHLAA+R R Y+E + +G + ++ SR PP
Sbjct: 2911 TFVRCTKPISIVPPAYYAHLAAYRGRLYIERSSESNGGSMNPSSVSRVGPP 3063
Score = 93.2 bits (197), Expect(2) = 5e-023
Identities = 46/73 (63%), Positives = 47/73 (64%)
Frame = +3 / -1
Query: 468 GGTIDTERVHLAYV*HKLLVRVCNPSAVNLFSSHRT**WAGRLVP*MPAWLHR*KSNSVG 647
GGTID VHL V*HKL +CN S VN FSSHR * G LVP P WL R*KSNS G
Sbjct: 2951 GGTIDIGFVHLTKV*HKLYTSLCNSSEVNSFSSHRIW*CVGLLVPFTPKWLQR*KSNSFG 2772
Query: 648 WQIFESTTVPGSM 686
I STTVPG M
Sbjct: 2771 *VITVSTTVPGGM 2733
Score = 58.3 bits (121), Expect(3) = 5e-062
Identities = 27/63 (42%), Positives = 38/63 (60%)
Frame = -2 / +1
Query: 934 LLISFWRATGQKPKRIIFYRDGVSEGQFYQVLLYELDAIRKACASLESDYQPPVTFVVVQ 755
LL F++A + P RIIF+RDGVSE QF +VL EL +I+ AC+ + VV +
Sbjct: 2509 LLDDFYKAVKKLPNRIIFFRDGVSETQFKKVLQEELQSIKTACSKFQDYNPSITFAVVQK 2688
Query: 754 KRH 746
+ H
Sbjct: 2689 RHH 2697
Score = 37.3 bits (75), Expect(2) = 5e-023
Identities = 23/45 (51%), Positives = 25/45 (55%)
Frame = +3 / -1
Query: 798 NDAQAFLMASSSYNRTW*NCPSLTPSL*NMILLGFCPVALQKEMR 932
N QA + SS RT+ NC SLTPSL NMI G AL K R
Sbjct: 2645 NFEQAVFID*SSSWRTFLNCVSLTPSLKNMIRFGSFFTAL*KSSR 2511
Score = 33.6 bits (67), Expect(3) = 5e-062
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -2 / +1
Query: 310 PLPALKENVKRVMFYC* 260
PLP L +NVK +MFYC*
Sbjct: 3073 PLPKLSDNVKNLMFYC* 3123
>gb|CK121100.1|CK121100 204j21.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011J21204
5-PRIME, mRNA sequence
Length = 777
Score = 236 bits (510), Expect = 8e-061
Identities = 97/122 (79%), Positives = 105/122 (86%)
Frame = -2 / +3
Query: 973 PKGGLSLVA*LGNLLISFWRATGQKPKRIIFYRDGVSEGQFYQVLLYELDAIRKACASLE 794
P+ G+ + LLI+F R+TG KP RIIFYRDGVSEGQFYQVLLYELDAIRKACASLE
Sbjct: 411 PQKGVVTGGMIKELLIAFRRSTGHKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLE 590
Query: 793 SDYQPPVTFVVVQKRHHTRLFVNNHNDQRAADRSGNILPGTVVDSKICHPTEFDFYLCSH 614
+ YQPPVTFVVVQKRHHTRLF NHND+ + DRSGNILP TVVDSKICHPTEFDFYLCSH
Sbjct: 591 AGYQPPVTFVVVQKRHHTRLFAQNHNDRHSVDRSGNILPVTVVDSKICHPTEFDFYLCSH 770
Query: 613 AG 608
AG
Sbjct: 771 AG 776
Score = 116 bits (249), Expect(2) = 6e-028
Identities = 52/101 (51%), Positives = 64/101 (63%)
Frame = -1 / +2
Query: 911 DWTKTQEDHILQGWCQ*GTVLPSSVVRT*CH*KGLCIIGV*LPASSYFCRGPEASSHQVV 732
+W T +DH+LQGW Q*GT+LPS + T*CH +GLC G L +S C G EASSH+ V
Sbjct: 473 NWA*TTKDHLLQGWSQ*GTILPSFAL*T*CHPQGLCFAGSRLSTTSDICGGAEASSHEAV 652
Query: 731 C**SQ*SACCR*KWQHTAGHCGGLKDLPSNRV*FLPVQPCW 609
C Q*S KW++ HC GL +LP RV* LP+ CW
Sbjct: 653 CSEPQ*SPFGGQKWEYFTCHCCGL*NLPPYRV*LLPL*SCW 775
Score = 116 bits (248), Expect = 1e-024
Identities = 54/109 (49%), Positives = 76/109 (69%)
Frame = +2 / -2
Query: 611 SMAAQVEIKLGWMANL*VHHSARQYVATSIGSTLIIVIINKQPGVMTLLDHDKSNWRLVI 790
SM +V++KL +A+ VH+S R + TS+ IIV+++KQP VMTLL H K +W L+
Sbjct: 773 SMTTEVKVKLCRVADFRVHNSDR*NIPTSVHRMAIIVVLSKQPRVMTLLHHHKCHWWLIT 594
Query: 791 RLQ*CTGLSNGIKFVQQNLVELSLTDTIPVEYDPLGFLSSRPPERNEKV 937
Q TGL++GIKF++QNLV+LSLTD+IPVE DP F+ S E E++
Sbjct: 593 CFQRSTGLADGIKFIEQNLVKLSLTDSIPVEDDP*WFMPS*STEGYEQL 447
Score = 94.5 bits (200), Expect(2) = 4e-026
Identities = 45/63 (71%), Positives = 50/63 (79%)
Frame = +3 / -3
Query: 741 V**RFWTTTKVTGGW*SDSNDAQAFLMASSSYNRTW*NCPSLTPSL*NMILLGFCPVALQ 920
V**RF TTT VTGG * S++AQA MASSS ++TW*NCPSLTPSL* MIL G CPV L+
Sbjct: 643 V**RFCTTTNVTGG**PASSEAQALRMASSS*SKTW*NCPSLTPSL*KMILSGLCPVDLR 464
Query: 921 KEM 929
K M
Sbjct: 463 KAM 455
Score = 46.4 bits (95), Expect(2) = 4e-026
Identities = 20/26 (76%), Positives = 21/26 (80%)
Frame = +3 / -3
Query: 609 PAWLHR*KSNSVGWQIFESTTVPGSM 686
PA L R*KSNSVGWQI ESTTV G +
Sbjct: 775 PA*LQR*KSNSVGWQILESTTVTGKI 698
Score = 29.9 bits (59), Expect(2) = 6e-028
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = -1 / +3
Query: 977 DPQRGTVSGGMIRE 936
DPQ+G V+GGMI+E
Sbjct: 408 DPQKGVVTGGMIKE 449
>gb|AV556836.1|AV556836 AV556836 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ053e11F 3', mRNA sequence
Length = 551
Score = 188 bits (404), Expect(3) = 1e-058
Identities = 70/111 (63%), Positives = 86/111 (77%)
Frame = -2 / -2
Query: 688 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCY 509
NI PGTVVD+ I HP EFDFYLCSH G++GTSRP HYH+LWDEN+FT+D LQ L NLCY
Sbjct: 430 NIPPGTVVDTVITHPKEFDFYLCSHLGVKGTSRPTHYHILWDENEFTSDELQRLVYNLCY 251
Query: 508 TYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGATTSRGPPP 356
T+ RCT+ +SIVPPAYYAHLAA+R R Y+E + +G + ++ SR PP
Sbjct: 250 TFVRCTKPISIVPPAYYAHLAAYRGRLYIERSSESNGGSMNPSSVSRVGPP 98
Score = 46.9 bits (96), Expect(3) = 1e-058
Identities = 18/28 (64%), Positives = 19/28 (67%)
Frame = -2 / -2
Query: 814 KACASLESDYQPPVTFVVVQKRHHTRLF 731
K S DY P +TF VVQKRHHTRLF
Sbjct: 535 KTACSKFQDYNPSITFAVVQKRHHTRLF 452
Score = 33.6 bits (67), Expect(3) = 1e-058
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -2 / -2
Query: 310 PLPALKENVKRVMFYC* 260
PLP L +NVK +MFYC*
Sbjct: 88 PLPKLSDNVKNLMFYC* 38
>gb|BX838222.1|BX838222 BX838222 Arabidopsis thaliana Silique Col-0 Arabidopsis thaliana
cDNA clone GSLTSIL68ZF03 5PRIM, mRNA sequence
Length = 616
Score = 207 bits (447), Expect(2) = 9e-057
Identities = 84/104 (80%), Positives = 91/104 (87%)
Frame = -2 / +1
Query: 682 LPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCYTY 503
L GTVVD+KICHP EFDFYL SHAGIQGTSRPAHYHVL DEN FTAD LQ LTNNLCYTY
Sbjct: 16 LSGTVVDTKICHPNEFDFYLNSHAGIQGTSRPAHYHVLLDENGFTADQLQMLTNNLCYTY 195
Query: 502 ARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGATTS 371
ARCT+SVSIVPPAYYAHLAAFRAR+YME + SD GS S ++T+
Sbjct: 196 ARCTKSVSIVPPAYYAHLAAFRARYYMESEMSDGGSSRSRSSTT 327
Score = 35.9 bits (72), Expect(2) = 9e-057
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = -2 / +1
Query: 316 VRPLPALKENVKRVMFYC* 260
+ LPA+K+NVK VMFYC*
Sbjct: 343 ISQLPAIKDNVKEVMFYC* 399
>gb|AY035081.1| Arabidopsis thaliana putative Argonaute (AGO1) protein (At2g27040)
mRNA, complete cds
Length = 3171
Score = 141 bits (303), Expect(3) = 6e-052
Identities = 57/122 (46%), Positives = 78/122 (63%)
Frame = -2 / +2
Query: 727 NNHNDQRAADRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 548
N+H N+ PGT++D+KICHP DFYLC+HAG+ GT+RP HYHVL+DE F+
Sbjct: 2477 NHHTKFFQPTSPENVPPGTIIDNKICHPKNNDFYLCAHAGMIGTTRPTHYHVLYDEIGFS 2656
Query: 547 ADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGATTSR 368
AD LQ L ++L Y Y R T ++S+V P YAHLAA + +M+ + S + G T+
Sbjct: 2657 ADELQELVHSLSYVYQRSTSAISVVAPICYAHLAAAQLGTFMKFEDQSETSSSHGGITAP 2836
Query: 367 GP 362
GP
Sbjct: 2837 GP 2842
Score = 74.8 bits (157), Expect(3) = 6e-052
Identities = 30/58 (51%), Positives = 40/58 (68%)
Frame = -2 / +2
Query: 904 QKPKRIIFYRDGVSEGQFYQVLLYELDAIRKACASLESDYQPPVTFVVVQKRHHTRLF 731
+KP+ II +RDGVSE QF QVL ELD I +AC L++++ P +V QK HHT+ F
Sbjct: 2324 RKPEHIIIFRDGVSESQFNQVLNIELDQIIEACKLLDANWNPKFLLLVAQKNHHTKFF 2497
Score = 29.5 bits (58), Expect(3) = 6e-052
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2 / +2
Query: 322 VAVRPLPALKENVKRVMFYC* 260
++V LP LK+NV MF+C*
Sbjct: 2843 ISVAQLPRLKDNVANSMFFC* 2905
>ref|NM_128262.2| Arabidopsis thaliana AGO4 (ARGONAUTE 4) AT2G27040 (AGO4) mRNA,
complete cds
Length = 3166
Score = 141 bits (303), Expect(3) = 6e-052
Identities = 57/122 (46%), Positives = 78/122 (63%)
Frame = -2 / +2
Query: 727 NNHNDQRAADRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 548
N+H N+ PGT++D+KICHP DFYLC+HAG+ GT+RP HYHVL+DE F+
Sbjct: 2477 NHHTKFFQPTSPENVPPGTIIDNKICHPKNNDFYLCAHAGMIGTTRPTHYHVLYDEIGFS 2656
Query: 547 ADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGATTSR 368
AD LQ L ++L Y Y R T ++S+V P YAHLAA + +M+ + S + G T+
Sbjct: 2657 ADELQELVHSLSYVYQRSTSAISVVAPICYAHLAAAQLGTFMKFEDQSETSSSHGGITAP 2836
Query: 367 GP 362
GP
Sbjct: 2837 GP 2842
Score = 74.8 bits (157), Expect(3) = 6e-052
Identities = 30/58 (51%), Positives = 40/58 (68%)
Frame = -2 / +2
Query: 904 QKPKRIIFYRDGVSEGQFYQVLLYELDAIRKACASLESDYQPPVTFVVVQKRHHTRLF 731
+KP+ II +RDGVSE QF QVL ELD I +AC L++++ P +V QK HHT+ F
Sbjct: 2324 RKPEHIIIFRDGVSESQFNQVLNIELDQIIEACKLLDANWNPKFLLLVAQKNHHTKFF 2497
Score = 29.5 bits (58), Expect(3) = 6e-052
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2 / +2
Query: 322 VAVRPLPALKENVKRVMFYC* 260
++V LP LK+NV MF+C*
Sbjct: 2843 ISVAQLPRLKDNVANSMFFC* 2905
>gb|AY051033.1| Arabidopsis thaliana putative argonaute AGO1 protein (At2g27040)
mRNA, complete cds
Length = 2806
Score = 141 bits (303), Expect(3) = 6e-052
Identities = 57/122 (46%), Positives = 78/122 (63%)
Frame = -2 / +1
Query: 727 NNHNDQRAADRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 548
N+H N+ PGT++D+KICHP DFYLC+HAG+ GT+RP HYHVL+DE F+
Sbjct: 2347 NHHTKFFQPTSPENVPPGTIIDNKICHPKNNDFYLCAHAGMIGTTRPTHYHVLYDEIGFS 2526
Query: 547 ADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGATTSR 368
AD LQ L ++L Y Y R T ++S+V P YAHLAA + +M+ + S + G T+
Sbjct: 2527 ADELQELVHSLSYVYQRSTSAISVVAPICYAHLAAAQLGTFMKFEDQSETSSSHGGITAP 2706
Query: 367 GP 362
GP
Sbjct: 2707 GP 2712
Score = 74.8 bits (157), Expect(3) = 6e-052
Identities = 30/58 (51%), Positives = 40/58 (68%)
Frame = -2 / +1
Query: 904 QKPKRIIFYRDGVSEGQFYQVLLYELDAIRKACASLESDYQPPVTFVVVQKRHHTRLF 731
+KP+ II +RDGVSE QF QVL ELD I +AC L++++ P +V QK HHT+ F
Sbjct: 2194 RKPEHIIIFRDGVSESQFNQVLNIELDQIIEACKLLDANWNPKFLLLVAQKNHHTKFF 2367
Score = 29.5 bits (58), Expect(3) = 6e-052
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2 / +1
Query: 322 VAVRPLPALKENVKRVMFYC* 260
++V LP LK+NV MF+C*
Sbjct: 2713 ISVAQLPRLKDNVANSMFFC* 2775
>emb|AX505699.1| Sequence 394 from Patent WO0216655
Length = 2793
Score = 141 bits (303), Expect(3) = 6e-052
Identities = 57/122 (46%), Positives = 78/122 (63%)
Frame = -2 / +1
Query: 727 NNHNDQRAADRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 548
N+H N+ PGT++D+KICHP DFYLC+HAG+ GT+RP HYHVL+DE F+
Sbjct: 2365 NHHTKFFQPTSPENVPPGTIIDNKICHPKNNDFYLCAHAGMIGTTRPTHYHVLYDEIGFS 2544
Query: 547 ADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGATTSR 368
AD LQ L ++L Y Y R T ++S+V P YAHLAA + +M+ + S + G T+
Sbjct: 2545 ADELQELVHSLSYVYQRSTSAISVVAPICYAHLAAAQLGTFMKFEDQSETSSSHGGITAP 2724
Query: 367 GP 362
GP
Sbjct: 2725 GP 2730
Score = 74.8 bits (157), Expect(3) = 6e-052
Identities = 30/58 (51%), Positives = 40/58 (68%)
Frame = -2 / +1
Query: 904 QKPKRIIFYRDGVSEGQFYQVLLYELDAIRKACASLESDYQPPVTFVVVQKRHHTRLF 731
+KP+ II +RDGVSE QF QVL ELD I +AC L++++ P +V QK HHT+ F
Sbjct: 2212 RKPEHIIIFRDGVSESQFNQVLNIELDQIIEACKLLDANWNPKFLLLVAQKNHHTKFF 2385
Score = 29.5 bits (58), Expect(3) = 6e-052
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2 / +1
Query: 322 VAVRPLPALKENVKRVMFYC* 260
++V LP LK+NV MF+C*
Sbjct: 2731 ISVAQLPRLKDNVANSMFFC* 2793
>emb|BX820023.1|CNS0A9EM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS63ZA02 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 838
Score = 141 bits (303), Expect(3) = 6e-052
Identities = 57/122 (46%), Positives = 78/122 (63%)
Frame = -2 / +2
Query: 727 NNHNDQRAADRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 548
N+H N+ PGT++D+KICHP DFYLC+HAG+ GT+RP HYHVL+DE F+
Sbjct: 191 NHHTKFFQPTSPENVPPGTIIDNKICHPKNNDFYLCAHAGMIGTTRPTHYHVLYDEIGFS 370
Query: 547 ADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGATTSR 368
AD LQ L ++L Y Y R T ++S+V P YAHLAA + +M+ + S + G T+
Sbjct: 371 ADELQELVHSLSYVYQRSTSAISVVAPICYAHLAAAQLGTFMKFEDQSETSSSHGGITAP 550
Query: 367 GP 362
GP
Sbjct: 551 GP 556
Score = 74.8 bits (157), Expect(3) = 6e-052
Identities = 30/58 (51%), Positives = 40/58 (68%)
Frame = -2 / +2
Query: 904 QKPKRIIFYRDGVSEGQFYQVLLYELDAIRKACASLESDYQPPVTFVVVQKRHHTRLF 731
+KP+ II +RDGVSE QF QVL ELD I +AC L++++ P +V QK HHT+ F
Sbjct: 38 RKPEHIIIFRDGVSESQFNQVLNIELDQIIEACKLLDANWNPKFLLLVAQKNHHTKFF 211
Score = 29.5 bits (58), Expect(3) = 6e-052
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2 / +2
Query: 322 VAVRPLPALKENVKRVMFYC* 260
++V LP LK+NV MF+C*
Sbjct: 557 ISVAQLPRLKDNVANSMFFC* 619
>gb|AV548172.1|AV548172 AV548172 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZL48g02F 3', mRNA sequence
Length = 540
Score = 197 bits (424), Expect(2) = 1e-050
Identities = 78/90 (86%), Positives = 82/90 (91%)
Frame = -2 / -3
Query: 622 CSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAA 443
CSHAGIQGTSRPAHYHVLWDEN FTADGLQ+LTNNLCYTYARCTRSVSIVPPAYYAHLAA
Sbjct: 538 CSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAA 359
Query: 442 FRARFYMEPDTSDSGSVASGATTSRGPPPG 353
FRARFYMEP+TSDSGS+ASG+ G G
Sbjct: 358 FRARFYMEPETSDSGSMASGSMARGGGMAG 269
Score = 103 bits (220), Expect(2) = 2e-024
Identities = 54/87 (62%), Positives = 59/87 (67%)
Frame = +3 / +3
Query: 354 PGGGPRLVVAPLATDPLSLVSGSM*NXXXXXXXXXXXXGGTIDTERVHLAYV*HKLLVRV 533
P P + PLA +PLS VSGSM*N GGTI+TERVHLAYV*HKLLVR
Sbjct: 270 PAIPPPRAMLPLAIEPLSDVSGSM*NRALKAARCA*YAGGTIETERVHLAYV*HKLLVRD 449
Query: 534 CNPSAVNLFSSHRT**WAGRLVP*MPA 614
+PSAV LFSS RT * AGR VP*+PA
Sbjct: 450 *SPSAVKLFSSQRTW**AGREVP*IPA 530
Score = 94.1 bits (199), Expect(2) = 3e-030
Identities = 38/67 (56%), Positives = 49/67 (73%)
Frame = -1 / -2
Query: 614 CWHSGNKPSCPLSCSVG*EQIYG*WVANSHQQLVLHVCQVHTLSINRSSCILCSSGSLPS 435
CW+SG+ +C L S+G*EQ+Y W + S Q L+LHVC++HTLS N S CILC+S S
Sbjct: 530 CWYSGHFSTCSLPRSLG*EQLYCRWTSISDQ*LMLHVCKMHTLSFNCSPCILCTSSSF*G 351
Query: 434 SVLHGAR 414
S+LHGAR
Sbjct: 350 SILHGAR 330
Score = 84.9 bits (179), Expect(2) = 5e-022
Identities = 38/75 (50%), Positives = 43/75 (57%)
Frame = +1 / +1
Query: 391 PQIRCHLYLAPCKTELGRLPDEHSMQEERLILSVCTWHTCNTSCW*EFATHQP*ICSHPT 570
P C + LAPC+ E +L D H+MQ E+L LSVC HTCN S W E H * CSHP
Sbjct: 307 PLSHCLMSLAPCRIEP*KLLDVHNMQGEQLKLSVCILHTCNISYWSEIEVHLQ*SCSHPK 486
Query: 571 EHDNGQDGLFPECQH 615
E N Q PE QH
Sbjct: 487 ERGNEQVEKCPEYQH 531
Score = 60.6 bits (126), Expect(2) = 3e-030
Identities = 26/43 (60%), Positives = 30/43 (69%)
Frame = -2 / -3
Query: 388 SGATTSRGPPPGARNTRAGAANVAVRPLPALKENVKRVMFYC* 260
+ + +RG R+TR N AVRPLPALKENVKRVMFYC*
Sbjct: 307 ASGSMARGGGMAGRSTRGPNVNAAVRPLPALKENVKRVMFYC* 179
Score = 42.3 bits (86), Expect(2) = 5e-022
Identities = 21/39 (53%), Positives = 24/39 (61%)
Frame = +3 / +3
Query: 264 Q*NMTRFTFSLRAGNGLTATFAAPALVLRAPGGGPRLVV 380
Q*NMTRFTFS RAG+GLTA VL PR ++
Sbjct: 183 Q*NMTRFTFSFRAGSGLTAALTLGPRVLLPAIPPPRAML 299
Score = 31.8 bits (63), Expect(2) = 2e-024
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2 / +2
Query: 266 VEHDALHVFLEGR*WPHSNI 325
VEHD LH+ + WPH +I
Sbjct: 185 VEHDTLHILFQSWEWPHCSI 244
Score = 26.3 bits (51), Expect(2) = 1e-050
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -3 / -1
Query: 333 VLQMLL*GHYLPSRKT*SASCSTAKI 256
++ ML *GH ++ *S SCSTA++
Sbjct: 252 LMSMLQ*GHSQL*KRM*SVSCSTAEL 175
>gb|AV529891.1|AV529891 AV529891 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZL51c02R 5', mRNA
sequence
Length = 528
Score = 185 bits (399), Expect(2) = 3e-047
Identities = 74/86 (86%), Positives = 78/86 (90%)
Frame = -2 / -1
Query: 610 GIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRAR 431
GIQGTSRPAHYHVLWDEN FTADGLQ+LTNNLCYTYARCTRSVSIVPPAYYAHLAAFRAR
Sbjct: 528 GIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRAR 349
Query: 430 FYMEPDTSDSGSVASGATTSRGPPPG 353
FYMEP+TSDSGS+ASG+ G G
Sbjct: 348 FYMEPETSDSGSMASGSMARGGGMAG 271
Score = 98.7 bits (209), Expect(2) = 5e-023
Identities = 52/85 (61%), Positives = 57/85 (67%)
Frame = +3 / +2
Query: 354 PGGGPRLVVAPLATDPLSLVSGSM*NXXXXXXXXXXXXGGTIDTERVHLAYV*HKLLVRV 533
P P + PLA +PLS VSGSM*N GGTI+TERVHLAYV*HKLLVR
Sbjct: 272 PAIPPPRAMLPLAIEPLSDVSGSM*NRALKAARCA*YAGGTIETERVHLAYV*HKLLVRD 451
Query: 534 CNPSAVNLFSSHRT**WAGRLVP*M 608
+PSAV LFSS RT * AGR VP*+
Sbjct: 452 *SPSAVKLFSSQRTW**AGREVP*I 526
Score = 84.9 bits (179), Expect(2) = 2e-027
Identities = 36/65 (55%), Positives = 47/65 (72%)
Frame = -1 / -3
Query: 608 HSGNKPSCPLSCSVG*EQIYG*WVANSHQQLVLHVCQVHTLSINRSSCILCSSGSLPSSV 429
+SG+ +C L S+G*EQ+Y W + S Q L+LHVC++HTLS N S CILC+S S S+
Sbjct: 526 YSGHFSTCSLPRSLG*EQLYCRWTSISDQ*LMLHVCKMHTLSFNCSPCILCTSSSF*GSI 347
Query: 428 LHGAR 414
LHGAR
Sbjct: 346 LHGAR 332
Score = 60.6 bits (126), Expect(2) = 2e-027
Identities = 26/43 (60%), Positives = 30/43 (69%)
Frame = -2 / -1
Query: 388 SGATTSRGPPPGARNTRAGAANVAVRPLPALKENVKRVMFYC* 260
+ + +RG R+TR N AVRPLPALKENVKRVMFYC*
Sbjct: 309 ASGSMARGGGMAGRSTRGPNVNAAVRPLPALKENVKRVMFYC* 181
Score = 31.8 bits (63), Expect(2) = 5e-023
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2 / +1
Query: 266 VEHDALHVFLEGR*WPHSNI 325
VEHD LH+ + WPH +I
Sbjct: 187 VEHDTLHILFQSWEWPHCSI 246
Score = 26.3 bits (51), Expect(2) = 3e-047
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -3 / -2
Query: 333 VLQMLL*GHYLPSRKT*SASCSTAKI 256
++ ML *GH ++ *S SCSTA++
Sbjct: 254 LMSMLQ*GHSQL*KRM*SVSCSTAEL 177
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 188 bits (404), Expect = 3e-046
Identities = 70/111 (63%), Positives = 86/111 (77%)
Frame = -2 / -2
Query: 688 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCY 509
NI PGTVVD+ I HP EFDFYLCSH G++GTSRP HYH+LWDEN+FT+D LQ L NLCY
Sbjct: 26105620 NIPPGTVVDTVITHPKEFDFYLCSHLGVKGTSRPTHYHILWDENEFTSDELQRLVYNLCY 26105441
Query: 508 TYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGATTSRGPPP 356
T+ RCT+ +SIVPPAYYAHLAA+R R Y+E + +G + ++ SR PP
Sbjct: 26105440 TFVRCTKPISIVPPAYYAHLAAYRGRLYIERSSESNGGSMNPSSVSRVGPP 26105288
Score = 144 bits (309), Expect = 4e-033
Identities = 53/96 (55%), Positives = 69/96 (71%)
Frame = -2 / +2
Query: 691 GNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLC 512
GN+ GTVVD+K+ HP E+DFYLCSH G GTS+P HY+ LWDE FT+D +Q L +C
Sbjct: 11184671 GNVPSGTVVDTKVIHPYEYDFYLCSHHGGIGTSKPTHYYTLWDELGFTSDQVQKLIFEMC 11184850
Query: 511 YTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSD 404
+T+ RCT+ VS+VPP YYA + AFR R Y E + +
Sbjct: 11184851 FTFTRCTKPVSLVPPVYYADMVAFRGRMYHEASSRE 11184958
Score = 124 bits (266), Expect = 4e-027
Identities = 52/107 (48%), Positives = 67/107 (62%)
Frame = -2 / +1
Query: 691 GNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLC 512
GN+ GTVVD+ I HP E+DFYLCS G GTS+P HY+VL DE F ++ +Q L +LC
Sbjct: 11191876 GNVPSGTVVDTTIIHPFEYDFYLCSQHGAIGTSKPTHYYVLSDEIGFNSNQIQKLIFDLC 11192055
Query: 511 YTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGATTS 371
+T+ RCT+ V++VPP YA AA R R Y E S S +S
Sbjct: 11192056 FTFTRCTKPVALVPPVSYADKAASRGRVYYEASLMKKNSKQSRGASS 11192196
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 144 bits (309), Expect(3) = 1e-045
Identities = 53/96 (55%), Positives = 69/96 (71%)
Frame = -2 / +3
Query: 691 GNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLC 512
GN+ GTVVD+K+ HP E+DFYLCSH G GTS+P HY+ LWDE FT+D +Q L +C
Sbjct: 11193471 GNVPSGTVVDTKVIHPYEYDFYLCSHHGGIGTSKPTHYYTLWDELGFTSDQVQKLIFEMC 11193650
Query: 511 YTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSD 404
+T+ RCT+ VS+VPP YYA + AFR R Y E + +
Sbjct: 11193651 FTFTRCTKPVSLVPPVYYADMVAFRGRMYHEASSRE 11193758
Score = 124 bits (266), Expect(3) = 4e-038
Identities = 52/107 (48%), Positives = 67/107 (62%)
Frame = -2 / +2
Query: 691 GNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLC 512
GN+ GTVVD+ I HP E+DFYLCS G GTS+P HY+VL DE F ++ +Q L +LC
Sbjct: 11200676 GNVPSGTVVDTTIIHPFEYDFYLCSQHGAIGTSKPTHYYVLSDEIGFNSNQIQKLIFDLC 11200855
Query: 511 YTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGATTS 371
+T+ RCT+ V++VPP YA AA R R Y E S S +S
Sbjct: 11200856 FTFTRCTKPVALVPPVSYADKAASRGRVYYEASLMKKNSKQSRGASS 11200996
Score = 42.3 bits (86), Expect(3) = 1e-045
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = -2 / +3
Query: 916 RATGQKPKRIIFYRDGVSEGQFYQVLLYEL 827
+ATG++P +I+ +RDGVS+ QF VL EL
Sbjct: 11193261 QATGKRPNKIVIFRDGVSDAQFDMVLNVEL 11193350
Score = 40.9 bits (83), Expect(3) = 4e-038
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = -2 / +2
Query: 916 RATGQKPKRIIFYRDGVSEGQFYQVLLYELDAIRKACASL 797
+A ++P +I+ +RDGVS+GQF VL EL ++ A +
Sbjct: 11200463 QAPEKRPNKIVIFRDGVSDGQFDMVLNVELQNVKDVFAKV 11200582
Score = 37.7 bits (76), Expect(3) = 1e-045
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -2 / +3
Query: 796 ESDYQPPVTFVVVQKRHHTRLFVNNHND 713
++ Y P +T +V QKRH TR F +ND
Sbjct: 11193375 KNGYNPKITVIVAQKRHQTRFFPATNND 11193458
Score = 33.1 bits (66), Expect(3) = 4e-038
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -2 / +2
Query: 787 YQPPVTFVVVQKRHHTRLF 731
Y P +T +V QKRH TR F
Sbjct: 11200586 YNPQITVIVAQKRHQTRFF 11200642
>gb|AC007654.2|AC007654 Genomic sequence for Arabidopsis thaliana BAC T19E23 from chromosome I,
complete sequence
Length = 87618
Score = 144 bits (309), Expect(3) = 1e-045
Identities = 53/96 (55%), Positives = 69/96 (71%)
Frame = -2 / +3
Query: 691 GNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLC 512
GN+ GTVVD+K+ HP E+DFYLCSH G GTS+P HY+ LWDE FT+D +Q L +C
Sbjct: 25182 GNVPSGTVVDTKVIHPYEYDFYLCSHHGGIGTSKPTHYYTLWDELGFTSDQVQKLIFEMC 25361
Query: 511 YTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSD 404
+T+ RCT+ VS+VPP YYA + AFR R Y E + +
Sbjct: 25362 FTFTRCTKPVSLVPPVYYADMVAFRGRMYHEASSRE 25469
Score = 124 bits (266), Expect(3) = 5e-038
Identities = 52/107 (48%), Positives = 67/107 (62%)
Frame = -2 / +2
Query: 691 GNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLC 512
GN+ GTVVD+ I HP E+DFYLCS G GTS+P HY+VL DE F ++ +Q L +LC
Sbjct: 32387 GNVPSGTVVDTTIIHPFEYDFYLCSQHGAIGTSKPTHYYVLSDEIGFNSNQIQKLIFDLC 32566
Query: 511 YTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGATTS 371
+T+ RCT+ V++VPP YA AA R R Y E S S +S
Sbjct: 32567 FTFTRCTKPVALVPPVSYADKAASRGRVYYEASLMKKNSKQSRGASS 32707
Score = 42.3 bits (86), Expect(3) = 1e-045
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = -2 / +3
Query: 916 RATGQKPKRIIFYRDGVSEGQFYQVLLYEL 827
+ATG++P +I+ +RDGVS+ QF VL EL
Sbjct: 24972 QATGKRPNKIVIFRDGVSDAQFDMVLNVEL 25061
Score = 40.9 bits (83), Expect(3) = 5e-038
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = -2 / +2
Query: 916 RATGQKPKRIIFYRDGVSEGQFYQVLLYELDAIRKACASL 797
+A ++P +I+ +RDGVS+GQF VL EL ++ A +
Sbjct: 32174 QAPEKRPNKIVIFRDGVSDGQFDMVLNVELQNVKDVFAKV 32293
Score = 37.7 bits (76), Expect(3) = 1e-045
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -2 / +3
Query: 796 ESDYQPPVTFVVVQKRHHTRLFVNNHND 713
++ Y P +T +V QKRH TR F +ND
Sbjct: 25086 KNGYNPKITVIVAQKRHQTRFFPATNND 25169
Score = 33.1 bits (66), Expect(3) = 5e-038
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -2 / +2
Query: 787 YQPPVTFVVVQKRHHTRLF 731
Y P +T +V QKRH TR F
Sbjct: 32297 YNPQITVIVAQKRHQTRFF 32353
>ref|NM_102866.1| Arabidopsis thaliana AGO2 AT1G31280 (AGO2) mRNA, complete cds
Length = 3042
Score = 144 bits (309), Expect(3) = 1e-045
Identities = 53/96 (55%), Positives = 69/96 (71%)
Frame = -2 / +1
Query: 691 GNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLC 512
GN+ GTVVD+K+ HP E+DFYLCSH G GTS+P HY+ LWDE FT+D +Q L +C
Sbjct: 2620 GNVPSGTVVDTKVIHPYEYDFYLCSHHGGIGTSKPTHYYTLWDELGFTSDQVQKLIFEMC 2799
Query: 511 YTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSD 404
+T+ RCT+ VS+VPP YYA + AFR R Y E + +
Sbjct: 2800 FTFTRCTKPVSLVPPVYYADMVAFRGRMYHEASSRE 2907
Score = 42.3 bits (86), Expect(3) = 1e-045
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = -2 / +1
Query: 916 RATGQKPKRIIFYRDGVSEGQFYQVLLYEL 827
+ATG++P +I+ +RDGVS+ QF VL EL
Sbjct: 2410 QATGKRPNKIVIFRDGVSDAQFDMVLNVEL 2499
Score = 37.7 bits (76), Expect(3) = 1e-045
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -2 / +1
Query: 796 ESDYQPPVTFVVVQKRHHTRLFVNNHND 713
++ Y P +T +V QKRH TR F +ND
Sbjct: 2524 KNGYNPKITVIVAQKRHQTRFFPATNND 2607
>dbj|AK118463.1| Arabidopsis thaliana At1g31280 mRNA for unknown protein, complete
cds, clone: RAFL19-70-F03
Length = 1950
Score = 144 bits (309), Expect(3) = 1e-045
Identities = 53/96 (55%), Positives = 69/96 (71%)
Frame = -2 / +3
Query: 691 GNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLC 512
GN+ GTVVD+K+ HP E+DFYLCSH G GTS+P HY+ LWDE FT+D +Q L +C
Sbjct: 1296 GNVPSGTVVDTKVIHPYEYDFYLCSHHGGIGTSKPTHYYTLWDELGFTSDQVQKLIFEMC 1475
Query: 511 YTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSD 404
+T+ RCT+ VS+VPP YYA + AFR R Y E + +
Sbjct: 1476 FTFTRCTKPVSLVPPVYYADMVAFRGRMYHEASSRE 1583
Score = 42.3 bits (86), Expect(3) = 1e-045
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = -2 / +3
Query: 916 RATGQKPKRIIFYRDGVSEGQFYQVLLYEL 827
+ATG++P +I+ +RDGVS+ QF VL EL
Sbjct: 1086 QATGKRPNKIVIFRDGVSDAQFDMVLNVEL 1175
Score = 37.7 bits (76), Expect(3) = 1e-045
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -2 / +3
Query: 796 ESDYQPPVTFVVVQKRHHTRLFVNNHND 713
++ Y P +T +V QKRH TR F +ND
Sbjct: 1200 KNGYNPKITVIVAQKRHQTRFFPATNND 1283
>gb|BT005914.1| Arabidopsis thaliana At1g31280 gene, complete cds
Length = 1623
Score = 144 bits (309), Expect(3) = 1e-045
Identities = 53/96 (55%), Positives = 69/96 (71%)
Frame = -2 / +1
Query: 691 GNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLC 512
GN+ GTVVD+K+ HP E+DFYLCSH G GTS+P HY+ LWDE FT+D +Q L +C
Sbjct: 1201 GNVPSGTVVDTKVIHPYEYDFYLCSHHGGIGTSKPTHYYTLWDELGFTSDQVQKLIFEMC 1380
Query: 511 YTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSD 404
+T+ RCT+ VS+VPP YYA + AFR R Y E + +
Sbjct: 1381 FTFTRCTKPVSLVPPVYYADMVAFRGRMYHEASSRE 1488
Score = 42.3 bits (86), Expect(3) = 1e-045
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = -2 / +1
Query: 916 RATGQKPKRIIFYRDGVSEGQFYQVLLYEL 827
+ATG++P +I+ +RDGVS+ QF VL EL
Sbjct: 991 QATGKRPNKIVIFRDGVSDAQFDMVLNVEL 1080
Score = 37.7 bits (76), Expect(3) = 1e-045
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -2 / +1
Query: 796 ESDYQPPVTFVVVQKRHHTRLFVNNHND 713
++ Y P +T +V QKRH TR F +ND
Sbjct: 1105 KNGYNPKITVIVAQKRHQTRFFPATNND 1188
>gb|AV548086.1|AV548086 AV548086 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZL46g10F 3', mRNA sequence
Length = 511
Score = 176 bits (378), Expect(2) = 2e-044
Identities = 70/82 (85%), Positives = 74/82 (90%)
Frame = -2 / -1
Query: 598 TSRPAHYHVLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYME 419
TSRPAHYHVLWDEN FTADGLQ+LTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYME
Sbjct: 511 TSRPAHYHVLWDENNFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYME 332
Query: 418 PDTSDSGSVASGATTSRGPPPG 353
P+TSDSGS+ASG+ G G
Sbjct: 331 PETSDSGSMASGSMARGGGMAG 266
Score = 94.1 bits (199), Expect(2) = 1e-021
Identities = 49/80 (61%), Positives = 53/80 (66%)
Frame = +3 / +3
Query: 354 PGGGPRLVVAPLATDPLSLVSGSM*NXXXXXXXXXXXXGGTIDTERVHLAYV*HKLLVRV 533
P P + PLA +PLS VSGSM*N GGTI+TERVHLAYV*HKLLVR
Sbjct: 267 PAIPPPRAMLPLAIEPLSDVSGSM*NRALKAARCA*YAGGTIETERVHLAYV*HKLLVRD 446
Query: 534 CNPSAVNLFSSHRT**WAGR 593
+PSAV LFSS RT * AGR
Sbjct: 447 *SPSAVKLFSSQRTW**AGR 506
Score = 80.8 bits (170), Expect(2) = 3e-026
Identities = 34/59 (57%), Positives = 43/59 (72%)
Frame = -1 / -3
Query: 590 SCPLSCSVG*EQIYG*WVANSHQQLVLHVCQVHTLSINRSSCILCSSGSLPSSVLHGAR 414
+C L S+G*EQ+Y W + S Q L+LHVC++HTLS N S CILC+S S S+LHGAR
Sbjct: 503 TCSLPRSLG*EQLYCRWTSISDQ*LMLHVCKMHTLSFNCSPCILCTSSSF*GSILHGAR 327
Score = 60.6 bits (126), Expect(2) = 3e-026
Identities = 26/43 (60%), Positives = 30/43 (69%)
Frame = -2 / -1
Query: 388 SGATTSRGPPPGARNTRAGAANVAVRPLPALKENVKRVMFYC* 260
+ + +RG R+TR N AVRPLPALKENVKRVMFYC*
Sbjct: 304 ASGSMARGGGMAGRSTRGPNVNAAVRPLPALKENVKRVMFYC* 176
Score = 31.8 bits (63), Expect(2) = 1e-021
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2 / +2
Query: 266 VEHDALHVFLEGR*WPHSNI 325
VEHD LH+ + WPH +I
Sbjct: 182 VEHDTLHILFQSWEWPHCSI 241
Score = 26.3 bits (51), Expect(2) = 2e-044
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -3 / -2
Query: 333 VLQMLL*GHYLPSRKT*SASCSTAKI 256
++ ML *GH ++ *S SCSTA++
Sbjct: 249 LMSMLQ*GHSQL*KRM*SVSCSTAEL 172
>gb|AY600524.1| Arabidopsis thaliana hypothetical protein (At1g48405) mRNA,
complete cds
Length = 1462
Score = 171 bits (369), Expect(2) = 3e-043
Identities = 68/80 (85%), Positives = 72/80 (90%)
Frame = -2 / +3
Query: 592 RPAHYHVLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPD 413
RPAHYHVLWDEN FTADGLQ+LTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEP+
Sbjct: 3 RPAHYHVLWDENNFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPE 182
Query: 412 TSDSGSVASGATTSRGPPPG 353
TSDSGS+ASG+ G G
Sbjct: 183 TSDSGSMASGSMARGGGMAG 242
Score = 94.1 bits (199), Expect(2) = 1e-021
Identities = 49/80 (61%), Positives = 53/80 (66%)
Frame = +3 / -1
Query: 354 PGGGPRLVVAPLATDPLSLVSGSM*NXXXXXXXXXXXXGGTIDTERVHLAYV*HKLLVRV 533
P P + PLA +PLS VSGSM*N GGTI+TERVHLAYV*HKLLVR
Sbjct: 241 PAIPPPRAMLPLAIEPLSDVSGSM*NRALKAARCA*YAGGTIETERVHLAYV*HKLLVRD 62
Query: 534 CNPSAVNLFSSHRT**WAGR 593
+PSAV LFSS RT * AGR
Sbjct: 61 *SPSAVKLFSSQRTW**AGR 2
Score = 80.8 bits (170), Expect(2) = 3e-026
Identities = 34/59 (57%), Positives = 43/59 (72%)
Frame = -1 / +2
Query: 590 SCPLSCSVG*EQIYG*WVANSHQQLVLHVCQVHTLSINRSSCILCSSGSLPSSVLHGAR 414
+C L S+G*EQ+Y W + S Q L+LHVC++HTLS N S CILC+S S S+LHGAR
Sbjct: 5 TCSLPRSLG*EQLYCRWTSISDQ*LMLHVCKMHTLSFNCSPCILCTSSSF*GSILHGAR 181
Score = 60.6 bits (126), Expect(2) = 3e-026
Identities = 26/43 (60%), Positives = 30/43 (69%)
Frame = -2 / +3
Query: 388 SGATTSRGPPPGARNTRAGAANVAVRPLPALKENVKRVMFYC* 260
+ + +RG R+TR N AVRPLPALKENVKRVMFYC*
Sbjct: 204 ASGSMARGGGMAGRSTRGPNVNAAVRPLPALKENVKRVMFYC* 332
Score = 31.8 bits (63), Expect(2) = 1e-021
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2 / -3
Query: 266 VEHDALHVFLEGR*WPHSNI 325
VEHD LH+ + WPH +I
Sbjct: 326 VEHDTLHILFQSWEWPHCSI 267
Score = 26.3 bits (51), Expect(2) = 3e-043
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -3 / +1
Query: 333 VLQMLL*GHYLPSRKT*SASCSTAKI 256
++ ML *GH ++ *S SCSTA++
Sbjct: 259 LMSMLQ*GHSQL*KRM*SVSCSTAEL 336
>ref|NM_122111.2| Arabidopsis thaliana unknown protein AT5G21030 mRNA, complete cds
Length = 2553
Score = 135 bits (290), Expect(3) = 4e-043
Identities = 56/125 (44%), Positives = 75/125 (60%)
Frame = -2 / +1
Query: 730 VNNHNDQRAADRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKF 551
+N+H + N+LPGT++DS ICH DFYLC+HAG GT+RP HYHVL+DE F
Sbjct: 2122 INHHTKFFQTESPNNVLPGTIIDSNICHQHNNDFYLCAHAGKIGTTRPTHYHVLYDEIGF 2301
Query: 550 TADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGATTS 371
D LQ L ++L Y Y R T ++S+V P YAHLAA + M+ + S + G T+
Sbjct: 2302 DTDQLQELVHSLSYVYQRSTTAISLVAPICYAHLAAAQMATAMKFEDMSETSSSHGGITT 2481
Query: 370 RGPPP 356
G P
Sbjct: 2482 AGAVP 2496
Score = 52.4 bits (108), Expect(3) = 4e-043
Identities = 22/37 (59%), Positives = 27/37 (72%)
Frame = -2 / +1
Query: 934 LLISFWRATGQKPKRIIFYRDGVSEGQFYQVLLYELD 824
LL+ F ++G+KP II +RDGVSE QF QVL ELD
Sbjct: 1999 LLLDFHSSSGKKPNHIIIFRDGVSESQFNQVLNIELD 2109
Score = 28.1 bits (55), Expect(3) = 4e-043
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -2 / +1
Query: 331 AANVAVRPLPALKENVKRVMFYC* 260
A V V P+P L NV MF+C*
Sbjct: 2482 AGAVPVPPMPKLNTNVASSMFFC* 2553
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 2,173,905,413
Number of Sequences: 1013581
Number of extensions: 32795131
Number of successful extensions: 200385
Number of sequences better than 1.0e-020: 105
length of database: 302,980,290
effective HSP length: 57
effective length of database: 245,206,173
effective search space used: 65715254364
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)