TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3670899.2.1
(555 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AC005313.3| Arabidopsis thaliana chromosome 2 clone T18E... 111 3e-043
ref|NM_126373.2| Arabidopsis thaliana FT1 (FUCOSYLTRANSFERA... 111 3e-043
gb|AY139993.1| Arabidopsis thaliana unknown protein mRNA, c... 111 3e-043
gb|BT002477.1| Arabidopsis thaliana unknown protein (At2g03... 111 3e-043
gb|AF154111.1|AF154111 Arabidopsis thaliana xyloglucan fuco... 111 3e-043
gb|BT003401.1| Arabidopsis thaliana unknown protein mRNA, c... 111 3e-043
gb|CK121533.1|CK121533 202l06.p1 AtM1 Arabidopsis thaliana ... 111 3e-043
emb|BX813608.1|CNS0ACCF Arabidopsis thaliana Full-length cD... 111 4e-042
gb|BP571184.1|BP571184 BP571184 RAFL14 Arabidopsis thaliana... 98 3e-039
ref|NM_126372.1| Arabidopsis thaliana FUT2; fucosyltransfer... 100 4e-036
gb|AC006920.11| Arabidopsis thaliana chromosome 2 clone F26... 106 9e-036
ref|NM_127095.1| Arabidopsis thaliana FUT10; fucosyltransfe... 106 1e-035
gb|BP794409.1|BP794409 BP794409 RAFL7 Arabidopsis thaliana ... 86 3e-035
gb|BP780259.1|BP780259 BP780259 RAFL7 Arabidopsis thaliana ... 86 4e-034
gb|AV805720.1|AV805720 AV805720 RAFL9 Arabidopsis thaliana ... 86 6e-034
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 107 1e-033
gb|AC007576.3| Arabidopsis thaliana chromosome I BAC F7A19 ... 107 1e-033
gb|AC068197.4|AC068197 Genomic sequence for Arabidopsis tha... 107 1e-033
ref|NM_101272.1| Arabidopsis thaliana FUT7; fucosyltransfer... 105 1e-033
ref|NM_101273.2| Arabidopsis thaliana FUT6; fucosyltransfer... 107 5e-033
gb|BT002489.1| Arabidopsis thaliana xyloglucan fucosyltrans... 107 5e-033
emb|AX507294.1| Sequence 1989 from Patent WO0216655 107 5e-033
gb|AF417475.1|AF417475 Arabidopsis thaliana fucosyltransfer... 103 5e-033
ref|NM_127097.1| Arabidopsis thaliana FUT5; fucosyltransfer... 103 5e-033
gb|BT008881.1| Arabidopsis thaliana At1g14080 mRNA, complet... 107 5e-033
gb|BH862014.1|BH862014 SALK_088540 Arabidopsis thaliana TDN... 103 7e-032
gb|AA605483.1|AA605483 30519 Lambda-PRL2 Arabidopsis thalia... 85 1e-030
emb|BX819649.1|CNS0A84W Arabidopsis thaliana Full-length cD... 100 7e-028
ref|NM_201739.1| Arabidopsis thaliana FUT4; fucosyltransfer... 100 7e-028
ref|NM_127099.2| Arabidopsis thaliana FUT4; fucosyltransfer... 100 7e-028
gb|AF417474.1|AF417474 Arabidopsis thaliana fucosyltransfer... 100 7e-028
emb|AX412254.1| Sequence 18 from Patent WO0222675 100 7e-028
emb|AX412452.1| Sequence 216 from Patent WO0222675 100 7e-028
emb|AX412825.1| Sequence 589 from Patent WO0222675 100 7e-028
emb|AX507295.1| Sequence 1990 from Patent WO0216655 100 7e-028
emb|AX651291.1| Sequence 76 from Patent WO03000898 100 7e-028
emb|BX821778.1|CNS0A985 Arabidopsis thaliana Full-length cD... 100 7e-028
ref|NM_101276.2| Arabidopsis thaliana fucosyltransferase/ t... 100 2e-027
gb|CD532606.1|CD532606 28B13 Arabidopsis Leaf Senescence Li... 96 8e-027
gb|B18679.1|B18679 F16A14-T7 IGF Arabidopsis thaliana genom... 98 1e-023
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 111 2e-023
gb|AV807820.1|AV807820 AV807820 RAFL9 Arabidopsis thaliana ... 59 5e-023
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 107 2e-022
gb|BP793185.1|BP793185 BP793185 RAFL7 Arabidopsis thaliana ... 78 3e-021
>gb|AC005313.3| Arabidopsis thaliana chromosome 2 clone T18E12 map CIC11A04, complete
sequence
Length = 91318
Score = 111 bits (237), Expect(2) = 3e-043
Identities = 45/75 (60%), Positives = 52/75 (69%)
Frame = -3 / +1
Query: 538 MYYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVA 359
MY+E PT +GEI+ V QPS E QQ HN KALAE+YLLS D + SAWSTFGYVA
Sbjct: 42787 MYWEYPTSTGEIIGVHQPSQEGYQQTEKKMHNGKALAEMYLLSLTDNLVTSAWSTFGYVA 42966
Query: 358 YSFAGVKPWILIRPD 314
G+KPWIL RP+
Sbjct: 42967 QGLGGLKPWILYRPE 43011
Score = 100 bits (213), Expect(2) = 4e-036
Identities = 38/75 (50%), Positives = 53/75 (70%)
Frame = -3 / +3
Query: 538 MYYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVA 359
MY+E+PT + +++ + QPSHE QQ HN+KA AE+YLLS DK+ +SAWSTFGYVA
Sbjct: 44844 MYWENPTVTRDVIGIHQPSHEGHQQTEKLMHNRKAWAEMYLLSLTDKLVISAWSTFGYVA 45023
Query: 358 YSFAGVKPWILIRPD 314
G++ WIL + +
Sbjct: 45024 QGLGGLRAWILYKQE 45068
Score = 85.8 bits (181), Expect(2) = 3e-043
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = -3 / +1
Query: 310 NRETSDVACVRSTSVEPCLHSPPILGCRAKTDVDVAAVKPYVRHCEDVGFGLKL 149
NR T D +C R+ S+EPC HSPP C+AKT +D + P+VRHCED+ +GLKL
Sbjct: 43012 NRTTPDPSCGRAMSMEPCFHSPPFYDCKAKTGIDTGTLVPHVRHCEDISWGLKL 43173
Score = 73.0 bits (153), Expect(2) = 4e-036
Identities = 26/57 (45%), Positives = 36/57 (63%)
Frame = -3 / +3
Query: 310 NRETSDVACVRSTSVEPCLHSPPILGCRAKTDVDVAAVKPYVRHCEDVGFGLKLFDS 140
N+ + C R+ S +PC H+PP C+AK D V P+VRHCED+ +GLKL D+
Sbjct: 45069 NQTNPNPPCGRAMSPDPCFHAPPYYDCKAKKGTDTGNVVPHVRHCEDISWGLKLVDN 45239
>ref|NM_126373.2| Arabidopsis thaliana FT1 (FUCOSYLTRANSFERASE 1); fucosyltransferase/
transferase, transferring glycosyl groups AT2G03220 (FT1)
mRNA, complete cds
Length = 1873
Score = 111 bits (237), Expect(2) = 3e-043
Identities = 45/75 (60%), Positives = 52/75 (69%)
Frame = -3 / +1
Query: 538 MYYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVA 359
MY+E PT +GEI+ V QPS E QQ HN KALAE+YLLS D + SAWSTFGYVA
Sbjct: 1339 MYWEYPTSTGEIIGVHQPSQEGYQQTEKKMHNGKALAEMYLLSLTDNLVTSAWSTFGYVA 1518
Query: 358 YSFAGVKPWILIRPD 314
G+KPWIL RP+
Sbjct: 1519 QGLGGLKPWILYRPE 1563
Score = 85.8 bits (181), Expect(2) = 3e-043
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = -3 / +1
Query: 310 NRETSDVACVRSTSVEPCLHSPPILGCRAKTDVDVAAVKPYVRHCEDVGFGLKL 149
NR T D +C R+ S+EPC HSPP C+AKT +D + P+VRHCED+ +GLKL
Sbjct: 1564 NRTTPDPSCGRAMSMEPCFHSPPFYDCKAKTGIDTGTLVPHVRHCEDISWGLKL 1725
>gb|AY139993.1| Arabidopsis thaliana unknown protein mRNA, complete cds
Length = 1786
Score = 111 bits (237), Expect(2) = 3e-043
Identities = 45/75 (60%), Positives = 52/75 (69%)
Frame = -3 / +1
Query: 538 MYYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVA 359
MY+E PT +GEI+ V QPS E QQ HN KALAE+YLLS D + SAWSTFGYVA
Sbjct: 1306 MYWEYPTSTGEIIGVHQPSQEGYQQTEKKMHNGKALAEMYLLSLTDNLVTSAWSTFGYVA 1485
Query: 358 YSFAGVKPWILIRPD 314
G+KPWIL RP+
Sbjct: 1486 QGLGGLKPWILYRPE 1530
Score = 85.8 bits (181), Expect(2) = 3e-043
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = -3 / +1
Query: 310 NRETSDVACVRSTSVEPCLHSPPILGCRAKTDVDVAAVKPYVRHCEDVGFGLKL 149
NR T D +C R+ S+EPC HSPP C+AKT +D + P+VRHCED+ +GLKL
Sbjct: 1531 NRTTPDPSCGRAMSMEPCFHSPPFYDCKAKTGIDTGTLVPHVRHCEDISWGLKL 1692
>gb|BT002477.1| Arabidopsis thaliana unknown protein (At2g03220) mRNA, complete cds
Length = 1772
Score = 111 bits (237), Expect(2) = 3e-043
Identities = 45/75 (60%), Positives = 52/75 (69%)
Frame = -3 / +3
Query: 538 MYYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVA 359
MY+E PT +GEI+ V QPS E QQ HN KALAE+YLLS D + SAWSTFGYVA
Sbjct: 1296 MYWEYPTSTGEIIGVHQPSQEGYQQTEKKMHNGKALAEMYLLSLTDNLVTSAWSTFGYVA 1475
Query: 358 YSFAGVKPWILIRPD 314
G+KPWIL RP+
Sbjct: 1476 QGLGGLKPWILYRPE 1520
Score = 85.8 bits (181), Expect(2) = 3e-043
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = -3 / +3
Query: 310 NRETSDVACVRSTSVEPCLHSPPILGCRAKTDVDVAAVKPYVRHCEDVGFGLKL 149
NR T D +C R+ S+EPC HSPP C+AKT +D + P+VRHCED+ +GLKL
Sbjct: 1521 NRTTPDPSCGRAMSMEPCFHSPPFYDCKAKTGIDTGTLVPHVRHCEDISWGLKL 1682
>gb|AF154111.1|AF154111 Arabidopsis thaliana xyloglucan fucosyltransferase (FT1) mRNA,
complete cds
Length = 1768
Score = 111 bits (237), Expect(2) = 3e-043
Identities = 45/75 (60%), Positives = 52/75 (69%)
Frame = -3 / +1
Query: 538 MYYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVA 359
MY+E PT +GEI+ V QPS E QQ HN KALAE+YLLS D + SAWSTFGYVA
Sbjct: 1303 MYWEYPTSTGEIIGVHQPSQEGYQQTEKKMHNGKALAEMYLLSLTDNLVTSAWSTFGYVA 1482
Query: 358 YSFAGVKPWILIRPD 314
G+KPWIL RP+
Sbjct: 1483 QGLGGLKPWILYRPE 1527
Score = 85.8 bits (181), Expect(2) = 3e-043
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = -3 / +1
Query: 310 NRETSDVACVRSTSVEPCLHSPPILGCRAKTDVDVAAVKPYVRHCEDVGFGLKL 149
NR T D +C R+ S+EPC HSPP C+AKT +D + P+VRHCED+ +GLKL
Sbjct: 1528 NRTTPDPSCGRAMSMEPCFHSPPFYDCKAKTGIDTGTLVPHVRHCEDISWGLKL 1689
>gb|BT003401.1| Arabidopsis thaliana unknown protein mRNA, complete cds
Length = 1706
Score = 111 bits (237), Expect(2) = 3e-043
Identities = 45/75 (60%), Positives = 52/75 (69%)
Frame = -3 / +1
Query: 538 MYYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVA 359
MY+E PT +GEI+ V QPS E QQ HN KALAE+YLLS D + SAWSTFGYVA
Sbjct: 1285 MYWEYPTSTGEIIGVHQPSQEGYQQTEKKMHNGKALAEMYLLSLTDNLVTSAWSTFGYVA 1464
Query: 358 YSFAGVKPWILIRPD 314
G+KPWIL RP+
Sbjct: 1465 QGLGGLKPWILYRPE 1509
Score = 85.8 bits (181), Expect(2) = 3e-043
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = -3 / +1
Query: 310 NRETSDVACVRSTSVEPCLHSPPILGCRAKTDVDVAAVKPYVRHCEDVGFGLKL 149
NR T D +C R+ S+EPC HSPP C+AKT +D + P+VRHCED+ +GLKL
Sbjct: 1510 NRTTPDPSCGRAMSMEPCFHSPPFYDCKAKTGIDTGTLVPHVRHCEDISWGLKL 1671
>gb|CK121533.1|CK121533 202l06.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011L06202
5-PRIME, mRNA sequence
Length = 806
Score = 111 bits (237), Expect(2) = 3e-043
Identities = 45/75 (60%), Positives = 52/75 (69%)
Frame = -3 / +3
Query: 538 MYYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVA 359
MY+E PT +GEI+ V QPS E QQ HN KALAE+YLLS D + SAWSTFGYVA
Sbjct: 363 MYWEYPTSTGEIIGVHQPSQEGYQQTEKKMHNGKALAEMYLLSLTDNLVTSAWSTFGYVA 542
Query: 358 YSFAGVKPWILIRPD 314
G+KPWIL RP+
Sbjct: 543 QGLGGLKPWILYRPE 587
Score = 85.8 bits (181), Expect(2) = 3e-043
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = -3 / +3
Query: 310 NRETSDVACVRSTSVEPCLHSPPILGCRAKTDVDVAAVKPYVRHCEDVGFGLKL 149
NR T D +C R+ S+EPC HSPP C+AKT +D + P+VRHCED+ +GLKL
Sbjct: 588 NRTTPDPSCGRAMSMEPCFHSPPFYDCKAKTGIDTGTLVPHVRHCEDISWGLKL 749
>emb|BX813608.1|CNS0ACCF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB27ZG02 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 840
Score = 111 bits (237), Expect(2) = 4e-042
Identities = 45/75 (60%), Positives = 52/75 (69%)
Frame = -3 / -2
Query: 538 MYYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVA 359
MY+E PT +GEI+ V QPS E QQ HN KALAE+YLLS D + SAWSTFGYVA
Sbjct: 479 MYWEYPTSTGEIIGVHQPSQEGYQQTEKKMHNGKALAEMYLLSLTDNLVTSAWSTFGYVA 300
Query: 358 YSFAGVKPWILIRPD 314
G+KPWIL RP+
Sbjct: 299 QGLGGLKPWILYRPE 255
Score = 82.2 bits (173), Expect(2) = 4e-042
Identities = 29/54 (53%), Positives = 38/54 (70%)
Frame = -3 / -2
Query: 310 NRETSDVACVRSTSVEPCLHSPPILGCRAKTDVDVAAVKPYVRHCEDVGFGLKL 149
NR T D +C R+ S+EPC HSPP C+AKT +D + P+VRHCED+ + LKL
Sbjct: 254 NRTTPDPSCGRAMSMEPCFHSPPFYDCKAKTGIDTGTLVPHVRHCEDISWELKL 93
>gb|BP571184.1|BP571184 BP571184 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-75-E16 3',
mRNA sequence
Length = 458
Score = 98.2 bits (208), Expect(2) = 3e-039
Identities = 40/67 (59%), Positives = 46/67 (68%)
Frame = -3 / -1
Query: 514 SGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVAYSFAGVKP 335
+GEI+ V QPS E QQ HN KALAE+YLLS D + SAWSTFGYVA G+KP
Sbjct: 455 TGEIIGVHQPSQEGYQQTEKKMHNGKALAEMYLLSLTDNLVTSAWSTFGYVAQGLGGLKP 276
Query: 334 WILIRPD 314
WIL RP+
Sbjct: 275 WILYRPE 255
Score = 85.8 bits (181), Expect(2) = 3e-039
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = -3 / -1
Query: 310 NRETSDVACVRSTSVEPCLHSPPILGCRAKTDVDVAAVKPYVRHCEDVGFGLKL 149
NR T D +C R+ S+EPC HSPP C+AKT +D + P+VRHCED+ +GLKL
Sbjct: 254 NRTTPDPSCGRAMSMEPCFHSPPFYDCKAKTGIDTGTLVPHVRHCEDISWGLKL 93
>ref|NM_126372.1| Arabidopsis thaliana FUT2; fucosyltransferase/ transferase,
transferring glycosyl groups AT2G03210 (FUT2) mRNA,
complete cds
Length = 1620
Score = 100 bits (213), Expect(2) = 4e-036
Identities = 38/75 (50%), Positives = 53/75 (70%)
Frame = -3 / +1
Query: 538 MYYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVA 359
MY+E+PT + +++ + QPSHE QQ HN+KA AE+YLLS DK+ +SAWSTFGYVA
Sbjct: 1219 MYWENPTVTRDVIGIHQPSHEGHQQTEKLMHNRKAWAEMYLLSLTDKLVISAWSTFGYVA 1398
Query: 358 YSFAGVKPWILIRPD 314
G++ WIL + +
Sbjct: 1399 QGLGGLRAWILYKQE 1443
Score = 73.0 bits (153), Expect(2) = 4e-036
Identities = 26/57 (45%), Positives = 36/57 (63%)
Frame = -3 / +1
Query: 310 NRETSDVACVRSTSVEPCLHSPPILGCRAKTDVDVAAVKPYVRHCEDVGFGLKLFDS 140
N+ + C R+ S +PC H+PP C+AK D V P+VRHCED+ +GLKL D+
Sbjct: 1444 NQTNPNPPCGRAMSPDPCFHAPPYYDCKAKKGTDTGNVVPHVRHCEDISWGLKLVDN 1614
>gb|AC006920.11| Arabidopsis thaliana chromosome 2 clone F26H6 map mi398, complete
sequence
Length = 89301
Score = 106 bits (227), Expect(2) = 9e-036
Identities = 41/74 (55%), Positives = 52/74 (70%)
Frame = -3 / +3
Query: 538 MYYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVA 359
M+ P+ +GEI+ V+QPS E QQ H+QKALAE+YLLS D I S WSTFGYV+
Sbjct: 69687 MFLARPSSTGEIIEVYQPSAERVQQTDKKSHDQKALAEMYLLSLTDNIVTSGWSTFGYVS 69866
Query: 358 YSFAGVKPWILIRP 317
YS G+KPW+L +P
Sbjct: 69867 YSLGGLKPWLLYQP 69908
Score = 103 bits (219), Expect(2) = 5e-033
Identities = 42/74 (56%), Positives = 53/74 (71%)
Frame = -3 / +3
Query: 538 MYYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVA 359
M+ + P+ +GEIV V+QPS E QQ H+QKALAE+YLLS D I SA STFGYV+
Sbjct: 59727 MFSKRPSSTGEIVEVYQPSGERVQQTDKKSHDQKALAEMYLLSLTDNIVTSARSTFGYVS 59906
Query: 358 YSFAGVKPWILIRP 317
YS G+KPW+L +P
Sbjct: 59907 YSLGGLKPWLLYQP 59948
Score = 100 bits (212), Expect(3) = 6e-028
Identities = 42/78 (53%), Positives = 53/78 (67%)
Frame = -3 / +2
Query: 538 MYYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVA 359
M+ E +GEI+ V+QPS E QQ H+QKALAE+YLLS D I S+ STFGYVA
Sbjct: 48485 MFSERANMTGEIIKVYQPSGERYQQTDKKVHDQKALAEMYLLSLTDNIVASSRSTFGYVA 48664
Query: 358 YSFAGVKPWILIRPDWNR 305
YS G+KPW+L P+ N+
Sbjct: 48665 YSLGGLKPWLLYLPNDNK 48718
Score = 65.2 bits (136), Expect(2) = 9e-036
Identities = 24/51 (47%), Positives = 32/51 (62%)
Frame = -3 / +3
Query: 310 NRETSDVACVRSTSVEPCLHSPPILGCRAKTDVDVAAVKPYVRHCEDVGFG 158
N T + CVRS S+EPC H+PP GC A + + P+VRHCED+ +G
Sbjct: 69912 NFTTPNPPCVRSKSMEPCYHTPPSHGCEADWGTNSGKILPFVRHCEDMMYG 70064
Score = 59.7 bits (124), Expect(2) = 5e-033
Identities = 23/51 (45%), Positives = 31/51 (60%)
Frame = -3 / +3
Query: 310 NRETSDVACVRSTSVEPCLHSPPILGCRAKTDVDVAAVKPYVRHCEDVGFG 158
N T + CVRS S+EPC +PP GC A + + P+VRHCED+ +G
Sbjct: 59952 NFTTPNPPCVRSKSMEPCYLTPPSHGCEADWGTNSGKILPFVRHCEDLIYG 60104
Score = 39.6 bits (80), Expect(3) = 6e-028
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -3 / +2
Query: 310 NRETSDVACVRSTSVEPCLHSPPILGC 230
+ + D CVRSTS+EPC +PP GC
Sbjct: 48710 DNKAPDPPCVRSTSMEPCFLTPPTHGC 48790
Score = 24.0 bits (46), Expect(3) = 6e-028
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -3 / +2
Query: 199 VKPYVRHCEDV 167
V P+VR+CED+
Sbjct: 48824 VVPFVRYCEDI 48856
>ref|NM_127095.1| Arabidopsis thaliana FUT10; fucosyltransferase/ transferase,
transferring glycosyl groups AT2G15350 (FUT10) mRNA,
complete cds
Length = 1323
Score = 106 bits (227), Expect(2) = 1e-035
Identities = 41/74 (55%), Positives = 52/74 (70%)
Frame = -3 / +1
Query: 538 MYYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVA 359
M+ P+ +GEI+ V+QPS E QQ H+QKALAE+YLLS D I S WSTFGYV+
Sbjct: 919 MFLARPSSTGEIIEVYQPSAERVQQTDKKSHDQKALAEMYLLSLTDNIVTSGWSTFGYVS 1098
Query: 358 YSFAGVKPWILIRP 317
YS G+KPW+L +P
Sbjct: 1099 YSLGGLKPWLLYQP 1140
Score = 65.2 bits (136), Expect(2) = 1e-035
Identities = 24/51 (47%), Positives = 32/51 (62%)
Frame = -3 / +1
Query: 310 NRETSDVACVRSTSVEPCLHSPPILGCRAKTDVDVAAVKPYVRHCEDVGFG 158
N T + CVRS S+EPC H+PP GC A + + P+VRHCED+ +G
Sbjct: 1144 NFTTPNPPCVRSKSMEPCYHTPPSHGCEADWGTNSGKILPFVRHCEDMMYG 1296
>gb|BP794409.1|BP794409 BP794409 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-60-G14 3',
mRNA sequence
Length = 428
Score = 85.8 bits (181), Expect(2) = 3e-035
Identities = 35/58 (60%), Positives = 39/58 (67%)
Frame = -3 / -1
Query: 487 PSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVAYSFAGVKPWILIRPD 314
PS E QQ HN KALAE+YLLS D + SAWSTFGYVA G+KPWIL RP+
Sbjct: 428 PSQEGYQQTEKKMHNGKALAEMYLLSLTDNLVTSAWSTFGYVAQGLGGLKPWILYRPE 255
Score = 84.5 bits (178), Expect(2) = 3e-035
Identities = 29/54 (53%), Positives = 39/54 (72%)
Frame = -3 / -1
Query: 310 NRETSDVACVRSTSVEPCLHSPPILGCRAKTDVDVAAVKPYVRHCEDVGFGLKL 149
NR T D +C R+ S+EPC HSPP C+AKT +D + P+VRHCED+ +GLK+
Sbjct: 254 NRTTPDPSCGRAMSMEPCFHSPPFYDCKAKTGIDTGTLVPHVRHCEDISWGLKV 93
>gb|BP780259.1|BP780259 BP780259 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-72-B12 3',
mRNA sequence
Length = 413
Score = 86.3 bits (182), Expect(2) = 4e-034
Identities = 31/54 (57%), Positives = 39/54 (72%)
Frame = -3 / -2
Query: 310 NRETSDVACVRSTSVEPCLHSPPILGCRAKTDVDVAAVKPYVRHCEDVGFGLKL 149
NR T D +C R+ S+EPC HSPP C+AKT +D + P+VRHCEDV +GLKL
Sbjct: 256 NRTTPDPSCGRAMSMEPCFHSPPFYDCKAKTGIDTGTLVPHVRHCEDVSWGLKL 95
Score = 79.9 bits (168), Expect(2) = 4e-034
Identities = 32/52 (61%), Positives = 36/52 (69%)
Frame = -3 / -2
Query: 469 QQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVAYSFAGVKPWILIRPD 314
QQ HN KALAE+YLLS D + SAWSTFGYVA G+KPWIL RP+
Sbjct: 412 QQTEKKMHNGKALAEMYLLSLTDNLVTSAWSTFGYVAQGLGGLKPWILYRPE 257
>gb|AV805720.1|AV805720 AV805720 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-43-P18 3',
mRNA sequence
Length = 416
Score = 85.8 bits (181), Expect(2) = 6e-034
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = -3 / -2
Query: 310 NRETSDVACVRSTSVEPCLHSPPILGCRAKTDVDVAAVKPYVRHCEDVGFGLKL 149
NR T D +C R+ S+EPC HSPP C+AKT +D + P+VRHCED+ +GLKL
Sbjct: 253 NRTTPDPSCGRAMSMEPCFHSPPFYDCKAKTGIDTGTLVPHVRHCEDISWGLKL 92
Score = 79.9 bits (168), Expect(2) = 6e-034
Identities = 32/52 (61%), Positives = 36/52 (69%)
Frame = -3 / -2
Query: 469 QQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVAYSFAGVKPWILIRPD 314
QQ HN KALAE+YLLS D + SAWSTFGYVA G+KPWIL RP+
Sbjct: 409 QQTEKKMHNGKALAEMYLLSLTDNLVTSAWSTFGYVAQGLGGLKPWILYRPE 254
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 107 bits (229), Expect(2) = 5e-033
Identities = 44/74 (59%), Positives = 55/74 (74%)
Frame = -3 / +1
Query: 538 MYYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVA 359
MY+E P+ +GEI+ V+QPS E QQ H+QKALAE+YLLS DKI SA STFGYVA
Sbjct: 4823635 MYWERPSSTGEIIEVYQPSGERVQQTDKKLHDQKALAEMYLLSLTDKIVTSARSTFGYVA 4823814
Query: 358 YSFAGVKPWILIRP 317
+S G+KPW+L +P
Sbjct: 4823815 HSLGGLKPWLLYQP 4823856
Score = 105 bits (223), Expect(2) = 1e-033
Identities = 44/74 (59%), Positives = 52/74 (70%)
Frame = -3 / +1
Query: 538 MYYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVA 359
MY+E PT +G+IV V+QPS E QQ H+QKALAE+YLLS DK+ SA STFGYVA
Sbjct: 4819555 MYWEHPTTTGDIVEVYQPSRERFQQTDKKLHDQKALAEMYLLSLTDKLVTSALSTFGYVA 4819734
Query: 358 YSFAGVKPWILIRP 317
G+KPWIL P
Sbjct: 4819735 QGLGGLKPWILYTP 4819776
Score = 100 bits (212), Expect(3) = 8e-029
Identities = 41/74 (55%), Positives = 52/74 (70%)
Frame = -3 / +3
Query: 538 MYYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVA 359
MY++ P+ +GEI+ ++QPS E QQ + H+QKALAEIYLLS D I S STFGYVA
Sbjct: 4829019 MYWKGPSSTGEIIQIYQPSQEIYQQTDNKLHDQKALAEIYLLSLTDYIVTSDSSTFGYVA 4829198
Query: 358 YSFAGVKPWILIRP 317
G+KPWIL +P
Sbjct: 4829199 QGLGGLKPWILYKP 4829240
Score = 93.2 bits (197), Expect(3) = 2e-027
Identities = 39/74 (52%), Positives = 49/74 (66%)
Frame = -3 / +3
Query: 538 MYYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVA 359
M+ E + +GE + V+QPS E+ QQ H+QKALAEIYLLS D++ S STFGYVA
Sbjct: 4831338 MFLEQASSTGETIEVYQPSGEKIQQTDKKLHDQKALAEIYLLSLTDELVTSTRSTFGYVA 4831517
Query: 358 YSFAGVKPWILIRP 317
G+KPWIL P
Sbjct: 4831518 QGLGGLKPWILYEP 4831559
Score = 59.7 bits (124), Expect(2) = 1e-033
Identities = 20/40 (50%), Positives = 28/40 (70%)
Frame = -3 / +1
Query: 286 CVRSTSVEPCLHSPPILGCRAKTDVDVAAVKPYVRHCEDV 167
C R S+EPC +PP+ GC AK ++ A + P+VRHCED+
Sbjct: 4819804 CGRVISMEPCFLTPPVHGCEAKKGINTAKIVPFVRHCEDL 4819923
Score = 55.1 bits (114), Expect(2) = 5e-033
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = -3 / +1
Query: 295 DVACVRSTSVEPCLHSPPILGCRAKTDVDVAAVKPYVRHCEDVG 164
D C++STS++PC +PP GC + + V P+VRHCED G
Sbjct: 4823875 DPPCIQSTSMDPCHLTPPSHGCEPEWGTNSGKVVPFVRHCEDRG 4824006
Score = 40.0 bits (81), Expect(3) = 2e-027
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = -3 / +3
Query: 310 NRETSDVACVRSTSVEPCLHSPPILGCRAKT 218
+++T + CVR+ S+EPC P+ GC+AKT
Sbjct: 4831563 DKKTPNPPCVRAMSMEPCFLRAPLHGCQAKT 4831655
Score = 37.7 bits (76), Expect(3) = 8e-029
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -3 / +3
Query: 310 NRETSDVACVRSTSVEPCLHSPPILGCRAK 221
N + CVR+ S+EPC P+ GC+AK
Sbjct: 4829244 NHTAPEPPCVRAVSMEPCFLRAPLYGCQAK 4829333
Score = 28.6 bits (56), Expect(3) = 8e-029
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -3 / +3
Query: 199 VKPYVRHCEDVGFGLKLFDS 140
+ P+V +CED GLKL DS
Sbjct: 4829343 ITPFVMYCEDRITGLKLVDS 4829402
Score = 28.1 bits (55), Expect(3) = 2e-027
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -3 / +3
Query: 199 VKPYVRHCEDVGFGLKLFD 143
+ P+VR CED GLKL D
Sbjct: 4831662 IPPFVRICEDWKTGLKLVD 4831718
>gb|AC007576.3| Arabidopsis thaliana chromosome I BAC F7A19 genomic sequence, complete
sequence
Length = 112126
Score = 107 bits (229), Expect(2) = 5e-033
Identities = 44/74 (59%), Positives = 55/74 (74%)
Frame = -3 / +2
Query: 538 MYYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVA 359
MY+E P+ +GEI+ V+QPS E QQ H+QKALAE+YLLS DKI SA STFGYVA
Sbjct: 66866 MYWERPSSTGEIIEVYQPSGERVQQTDKKLHDQKALAEMYLLSLTDKIVTSARSTFGYVA 67045
Query: 358 YSFAGVKPWILIRP 317
+S G+KPW+L +P
Sbjct: 67046 HSLGGLKPWLLYQP 67087
Score = 105 bits (223), Expect(2) = 1e-033
Identities = 44/74 (59%), Positives = 52/74 (70%)
Frame = -3 / +2
Query: 538 MYYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVA 359
MY+E PT +G+IV V+QPS E QQ H+QKALAE+YLLS DK+ SA STFGYVA
Sbjct: 62786 MYWEHPTTTGDIVEVYQPSRERFQQTDKKLHDQKALAEMYLLSLTDKLVTSALSTFGYVA 62965
Query: 358 YSFAGVKPWILIRP 317
G+KPWIL P
Sbjct: 62966 QGLGGLKPWILYTP 63007
Score = 100 bits (212), Expect(3) = 9e-029
Identities = 41/74 (55%), Positives = 52/74 (70%)
Frame = -3 / +1
Query: 538 MYYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVA 359
MY++ P+ +GEI+ ++QPS E QQ + H+QKALAEIYLLS D I S STFGYVA
Sbjct: 72250 MYWKGPSSTGEIIQIYQPSQEIYQQTDNKLHDQKALAEIYLLSLTDYIVTSDSSTFGYVA 72429
Query: 358 YSFAGVKPWILIRP 317
G+KPWIL +P
Sbjct: 72430 QGLGGLKPWILYKP 72471
Score = 93.2 bits (197), Expect(3) = 3e-027
Identities = 39/74 (52%), Positives = 49/74 (66%)
Frame = -3 / +1
Query: 538 MYYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVA 359
M+ E + +GE + V+QPS E+ QQ H+QKALAEIYLLS D++ S STFGYVA
Sbjct: 74569 MFLEQASSTGETIEVYQPSGEKIQQTDKKLHDQKALAEIYLLSLTDELVTSTRSTFGYVA 74748
Query: 358 YSFAGVKPWILIRP 317
G+KPWIL P
Sbjct: 74749 QGLGGLKPWILYEP 74790
Score = 59.7 bits (124), Expect(2) = 1e-033
Identities = 20/40 (50%), Positives = 28/40 (70%)
Frame = -3 / +2
Query: 286 CVRSTSVEPCLHSPPILGCRAKTDVDVAAVKPYVRHCEDV 167
C R S+EPC +PP+ GC AK ++ A + P+VRHCED+
Sbjct: 63035 CGRVISMEPCFLTPPVHGCEAKKGINTAKIVPFVRHCEDL 63154
Score = 55.1 bits (114), Expect(2) = 5e-033
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = -3 / +2
Query: 295 DVACVRSTSVEPCLHSPPILGCRAKTDVDVAAVKPYVRHCEDVG 164
D C++STS++PC +PP GC + + V P+VRHCED G
Sbjct: 67106 DPPCIQSTSMDPCHLTPPSHGCEPEWGTNSGKVVPFVRHCEDRG 67237
Score = 40.0 bits (81), Expect(3) = 3e-027
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = -3 / +1
Query: 310 NRETSDVACVRSTSVEPCLHSPPILGCRAKT 218
+++T + CVR+ S+EPC P+ GC+AKT
Sbjct: 74794 DKKTPNPPCVRAMSMEPCFLRAPLHGCQAKT 74886
Score = 37.7 bits (76), Expect(3) = 9e-029
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -3 / +1
Query: 310 NRETSDVACVRSTSVEPCLHSPPILGCRAK 221
N + CVR+ S+EPC P+ GC+AK
Sbjct: 72475 NHTAPEPPCVRAVSMEPCFLRAPLYGCQAK 72564
Score = 28.6 bits (56), Expect(3) = 9e-029
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -3 / +1
Query: 199 VKPYVRHCEDVGFGLKLFDS 140
+ P+V +CED GLKL DS
Sbjct: 72574 ITPFVMYCEDRITGLKLVDS 72633
Score = 28.1 bits (55), Expect(3) = 3e-027
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -3 / +1
Query: 199 VKPYVRHCEDVGFGLKLFD 143
+ P+VR CED GLKL D
Sbjct: 74893 IPPFVRICEDWKTGLKLVD 74949
>gb|AC068197.4|AC068197 Genomic sequence for Arabidopsis thaliana BAC F16A14 from chromosome I,
complete sequence
Length = 99547
Score = 107 bits (229), Expect(2) = 5e-033
Identities = 44/74 (59%), Positives = 55/74 (74%)
Frame = -3 / +1
Query: 538 MYYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVA 359
MY+E P+ +GEI+ V+QPS E QQ H+QKALAE+YLLS DKI SA STFGYVA
Sbjct: 99076 MYWERPSSTGEIIEVYQPSGERVQQTDKKLHDQKALAEMYLLSLTDKIVTSARSTFGYVA 99255
Query: 358 YSFAGVKPWILIRP 317
+S G+KPW+L +P
Sbjct: 99256 HSLGGLKPWLLYQP 99297
Score = 105 bits (223), Expect(2) = 1e-033
Identities = 44/74 (59%), Positives = 52/74 (70%)
Frame = -3 / +1
Query: 538 MYYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVA 359
MY+E PT +G+IV V+QPS E QQ H+QKALAE+YLLS DK+ SA STFGYVA
Sbjct: 94996 MYWEHPTTTGDIVEVYQPSRERFQQTDKKLHDQKALAEMYLLSLTDKLVTSALSTFGYVA 95175
Query: 358 YSFAGVKPWILIRP 317
G+KPWIL P
Sbjct: 95176 QGLGGLKPWILYTP 95217
Score = 59.7 bits (124), Expect(2) = 1e-033
Identities = 20/40 (50%), Positives = 28/40 (70%)
Frame = -3 / +1
Query: 286 CVRSTSVEPCLHSPPILGCRAKTDVDVAAVKPYVRHCEDV 167
C R S+EPC +PP+ GC AK ++ A + P+VRHCED+
Sbjct: 95245 CGRVISMEPCFLTPPVHGCEAKKGINTAKIVPFVRHCEDL 95364
Score = 55.1 bits (114), Expect(2) = 5e-033
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = -3 / +1
Query: 295 DVACVRSTSVEPCLHSPPILGCRAKTDVDVAAVKPYVRHCEDVG 164
D C++STS++PC +PP GC + + V P+VRHCED G
Sbjct: 99316 DPPCIQSTSMDPCHLTPPSHGCEPEWGTNSGKVVPFVRHCEDRG 99447
>ref|NM_101272.1| Arabidopsis thaliana FUT7; fucosyltransferase/ transferase,
transferring glycosyl groups AT1G14070 (FUT7) mRNA,
complete cds
Length = 1530
Score = 105 bits (223), Expect(2) = 1e-033
Identities = 44/74 (59%), Positives = 52/74 (70%)
Frame = -3 / +1
Query: 538 MYYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVA 359
MY+E PT +G+IV V+QPS E QQ H+QKALAE+YLLS DK+ SA STFGYVA
Sbjct: 1114 MYWEHPTTTGDIVEVYQPSRERFQQTDKKLHDQKALAEMYLLSLTDKLVTSALSTFGYVA 1293
Query: 358 YSFAGVKPWILIRP 317
G+KPWIL P
Sbjct: 1294 QGLGGLKPWILYTP 1335
Score = 59.7 bits (124), Expect(2) = 1e-033
Identities = 20/40 (50%), Positives = 28/40 (70%)
Frame = -3 / +1
Query: 286 CVRSTSVEPCLHSPPILGCRAKTDVDVAAVKPYVRHCEDV 167
C R S+EPC +PP+ GC AK ++ A + P+VRHCED+
Sbjct: 1363 CGRVISMEPCFLTPPVHGCEAKKGINTAKIVPFVRHCEDL 1482
>ref|NM_101273.2| Arabidopsis thaliana FUT6; fucosyltransferase/ transferase,
transferring glycosyl groups AT1G14080 (FUT6) mRNA,
complete cds
Length = 1808
Score = 107 bits (229), Expect(2) = 5e-033
Identities = 44/74 (59%), Positives = 55/74 (74%)
Frame = -3 / +2
Query: 538 MYYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVA 359
MY+E P+ +GEI+ V+QPS E QQ H+QKALAE+YLLS DKI SA STFGYVA
Sbjct: 1208 MYWERPSSTGEIIEVYQPSGERVQQTDKKLHDQKALAEMYLLSLTDKIVTSARSTFGYVA 1387
Query: 358 YSFAGVKPWILIRP 317
+S G+KPW+L +P
Sbjct: 1388 HSLGGLKPWLLYQP 1429
Score = 55.1 bits (114), Expect(2) = 5e-033
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = -3 / +2
Query: 295 DVACVRSTSVEPCLHSPPILGCRAKTDVDVAAVKPYVRHCEDVG 164
D C++STS++PC +PP GC + + V P+VRHCED G
Sbjct: 1448 DPPCIQSTSMDPCHLTPPSHGCEPEWGTNSGKVVPFVRHCEDRG 1579
>gb|BT002489.1| Arabidopsis thaliana xyloglucan fucosyltransferase, putative
(At1g14080) mRNA, complete cds
Length = 1806
Score = 107 bits (229), Expect(2) = 5e-033
Identities = 44/74 (59%), Positives = 55/74 (74%)
Frame = -3 / +2
Query: 538 MYYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVA 359
MY+E P+ +GEI+ V+QPS E QQ H+QKALAE+YLLS DKI SA STFGYVA
Sbjct: 1208 MYWERPSSTGEIIEVYQPSGERVQQTDKKLHDQKALAEMYLLSLTDKIVTSARSTFGYVA 1387
Query: 358 YSFAGVKPWILIRP 317
+S G+KPW+L +P
Sbjct: 1388 HSLGGLKPWLLYQP 1429
Score = 55.1 bits (114), Expect(2) = 5e-033
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = -3 / +2
Query: 295 DVACVRSTSVEPCLHSPPILGCRAKTDVDVAAVKPYVRHCEDVG 164
D C++STS++PC +PP GC + + V P+VRHCED G
Sbjct: 1448 DPPCIQSTSMDPCHLTPPSHGCEPEWGTNSGKVVPFVRHCEDRG 1579
>emb|AX507294.1| Sequence 1989 from Patent WO0216655
Length = 1614
Score = 107 bits (229), Expect(2) = 5e-033
Identities = 44/74 (59%), Positives = 55/74 (74%)
Frame = -3 / +1
Query: 538 MYYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVA 359
MY+E P+ +GEI+ V+QPS E QQ H+QKALAE+YLLS DKI SA STFGYVA
Sbjct: 1210 MYWERPSSTGEIIEVYQPSGERVQQTDKKLHDQKALAEMYLLSLTDKIVTSARSTFGYVA 1389
Query: 358 YSFAGVKPWILIRP 317
+S G+KPW+L +P
Sbjct: 1390 HSLGGLKPWLLYQP 1431
Score = 55.1 bits (114), Expect(2) = 5e-033
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = -3 / +1
Query: 295 DVACVRSTSVEPCLHSPPILGCRAKTDVDVAAVKPYVRHCEDVG 164
D C++STS++PC +PP GC + + V P+VRHCED G
Sbjct: 1450 DPPCIQSTSMDPCHLTPPSHGCEPEWGTNSGKVVPFVRHCEDRG 1581
>gb|AF417475.1|AF417475 Arabidopsis thaliana fucosyltransferase-like protein FUT5 (FUT5)
mRNA, complete cds
Length = 1602
Score = 103 bits (219), Expect(2) = 5e-033
Identities = 42/74 (56%), Positives = 53/74 (71%)
Frame = -3 / +1
Query: 538 MYYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVA 359
M+ + P+ +GEIV V+QPS E QQ H+QKALAE+YLLS D I SA STFGYV+
Sbjct: 1198 MFSKRPSSTGEIVEVYQPSGERVQQTDKKSHDQKALAEMYLLSLTDNIVTSARSTFGYVS 1377
Query: 358 YSFAGVKPWILIRP 317
YS G+KPW+L +P
Sbjct: 1378 YSLGGLKPWLLYQP 1419
Score = 59.7 bits (124), Expect(2) = 5e-033
Identities = 23/51 (45%), Positives = 31/51 (60%)
Frame = -3 / +1
Query: 310 NRETSDVACVRSTSVEPCLHSPPILGCRAKTDVDVAAVKPYVRHCEDVGFG 158
N T + CVRS S+EPC +PP GC A + + P+VRHCED+ +G
Sbjct: 1423 NFTTPNPPCVRSKSMEPCYLTPPSHGCEADWGTNSGKILPFVRHCEDLIYG 1575
>ref|NM_127097.1| Arabidopsis thaliana FUT5; fucosyltransferase/ transferase,
transferring glycosyl groups AT2G15370 (FUT5) mRNA,
complete cds
Length = 1602
Score = 103 bits (219), Expect(2) = 5e-033
Identities = 42/74 (56%), Positives = 53/74 (71%)
Frame = -3 / +1
Query: 538 MYYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVA 359
M+ + P+ +GEIV V+QPS E QQ H+QKALAE+YLLS D I SA STFGYV+
Sbjct: 1198 MFSKRPSSTGEIVEVYQPSGERVQQTDKKSHDQKALAEMYLLSLTDNIVTSARSTFGYVS 1377
Query: 358 YSFAGVKPWILIRP 317
YS G+KPW+L +P
Sbjct: 1378 YSLGGLKPWLLYQP 1419
Score = 59.7 bits (124), Expect(2) = 5e-033
Identities = 23/51 (45%), Positives = 31/51 (60%)
Frame = -3 / +1
Query: 310 NRETSDVACVRSTSVEPCLHSPPILGCRAKTDVDVAAVKPYVRHCEDVGFG 158
N T + CVRS S+EPC +PP GC A + + P+VRHCED+ +G
Sbjct: 1423 NFTTPNPPCVRSKSMEPCYLTPPSHGCEADWGTNSGKILPFVRHCEDLIYG 1575
>gb|BT008881.1| Arabidopsis thaliana At1g14080 mRNA, complete cds
Length = 1560
Score = 107 bits (229), Expect(2) = 5e-033
Identities = 44/74 (59%), Positives = 55/74 (74%)
Frame = -3 / +1
Query: 538 MYYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVA 359
MY+E P+ +GEI+ V+QPS E QQ H+QKALAE+YLLS DKI SA STFGYVA
Sbjct: 1156 MYWERPSSTGEIIEVYQPSGERVQQTDKKLHDQKALAEMYLLSLTDKIVTSARSTFGYVA 1335
Query: 358 YSFAGVKPWILIRP 317
+S G+KPW+L +P
Sbjct: 1336 HSLGGLKPWLLYQP 1377
Score = 55.1 bits (114), Expect(2) = 5e-033
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = -3 / +1
Query: 295 DVACVRSTSVEPCLHSPPILGCRAKTDVDVAAVKPYVRHCEDVG 164
D C++STS++PC +PP GC + + V P+VRHCED G
Sbjct: 1396 DPPCIQSTSMDPCHLTPPSHGCEPEWGTNSGKVVPFVRHCEDRG 1527
>gb|BH862014.1|BH862014 SALK_088540 Arabidopsis thaliana TDNA insertion lines Arabidopsis
thaliana genomic clone SALK_088540, DNA sequence
Length = 404
Score = 103 bits (220), Expect(2) = 7e-032
Identities = 42/73 (57%), Positives = 54/73 (73%)
Frame = -3 / +1
Query: 535 YYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVAY 356
Y+E P+ +GEI+ V+QPS E QQ H+QKALAE+YLLS DKI SA STFGYVA+
Sbjct: 1 YWERPSSTGEIIEVYQPSGERVQQTDKKLHDQKALAEMYLLSLTDKIVTSARSTFGYVAH 180
Query: 355 SFAGVKPWILIRP 317
S G++PW+L +P
Sbjct: 181 SLGGLEPWLLYQP 219
Score = 55.1 bits (114), Expect(2) = 7e-032
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = -3 / +1
Query: 295 DVACVRSTSVEPCLHSPPILGCRAKTDVDVAAVKPYVRHCEDVG 164
D C++STS++PC +PP GC + + V P+VRHCED G
Sbjct: 238 DPPCIQSTSMDPCHLTPPSHGCEPEWGTNSGKVVPFVRHCEDRG 369
>gb|AA605483.1|AA605483 30519 Lambda-PRL2 Arabidopsis thaliana cDNA clone 191A6XP 3', mRNA
sequence
Length = 507
Score = 85.4 bits (180), Expect(2) = 1e-030
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = -3 / +2
Query: 310 NRETSDVACVRSTSVEPCLHSPPILGCRAKTDVDVAAVKPYVRHCEDVGFGLKL 149
NR T D +C R+ S+EPC HSPP C+AKT +D + P+VRHCED+ +GLKL
Sbjct: 254 NRTTPDPSCGRAMSMEPCFHSPPFYDCKAKTGIDXGTLVPHVRHCEDISWGLKL 415
Score = 69.8 bits (146), Expect(2) = 1e-030
Identities = 27/42 (64%), Positives = 31/42 (73%)
Frame = -3 / +2
Query: 439 KALAEIYLLSYCDKITMSAWSTFGYVAYSFAGVKPWILIRPD 314
KALAE+YLLS D + SAWSTFGYVA G+ PWIL RP+
Sbjct: 128 KALAEMYLLSXTDNLVTSAWSTFGYVAQGLGGLXPWILYRPE 253
>emb|BX819649.1|CNS0A84W Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS11ZD01 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1686
Score = 100 bits (212), Expect(3) = 7e-028
Identities = 42/78 (53%), Positives = 53/78 (67%)
Frame = -3 / +3
Query: 538 MYYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVA 359
M+ E +GEI+ V+QPS E QQ H+QKALAE+YLLS D I S+ STFGYVA
Sbjct: 1200 MFSERANMTGEIIKVYQPSGERYQQTDKKVHDQKALAEMYLLSLTDNIVASSRSTFGYVA 1379
Query: 358 YSFAGVKPWILIRPDWNR 305
YS G+KPW+L P+ N+
Sbjct: 1380 YSLGGLKPWLLYLPNDNK 1433
Score = 39.6 bits (80), Expect(3) = 7e-028
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -3 / +3
Query: 310 NRETSDVACVRSTSVEPCLHSPPILGC 230
+ + D CVRSTS+EPC +PP GC
Sbjct: 1425 DNKAPDPPCVRSTSMEPCFLTPPTHGC 1505
Score = 24.0 bits (46), Expect(3) = 7e-028
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -3 / +3
Query: 199 VKPYVRHCEDV 167
V P+VR+CED+
Sbjct: 1539 VVPFVRYCEDI 1571
>ref|NM_201739.1| Arabidopsis thaliana FUT4; fucosyltransferase AT2G15390 (FUT4)
transcript variant AT2G15390.2 mRNA, complete cds
Length = 1683
Score = 100 bits (212), Expect(3) = 7e-028
Identities = 42/78 (53%), Positives = 53/78 (67%)
Frame = -3 / +1
Query: 538 MYYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVA 359
M+ E +GEI+ V+QPS E QQ H+QKALAE+YLLS D I S+ STFGYVA
Sbjct: 1198 MFSERANMTGEIIKVYQPSGERYQQTDKKVHDQKALAEMYLLSLTDNIVASSRSTFGYVA 1377
Query: 358 YSFAGVKPWILIRPDWNR 305
YS G+KPW+L P+ N+
Sbjct: 1378 YSLGGLKPWLLYLPNDNK 1431
Score = 39.6 bits (80), Expect(3) = 7e-028
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -3 / +1
Query: 310 NRETSDVACVRSTSVEPCLHSPPILGC 230
+ + D CVRSTS+EPC +PP GC
Sbjct: 1423 DNKAPDPPCVRSTSMEPCFLTPPTHGC 1503
Score = 24.0 bits (46), Expect(3) = 7e-028
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -3 / +1
Query: 199 VKPYVRHCEDV 167
V P+VR+CED+
Sbjct: 1537 VVPFVRYCEDI 1569
>ref|NM_127099.2| Arabidopsis thaliana FUT4; fucosyltransferase/ transferase,
transferring glycosyl groups AT2G15390 (FUT4) transcript
variant AT2G15390.1 mRNA, complete cds
Length = 1596
Score = 100 bits (212), Expect(3) = 7e-028
Identities = 42/78 (53%), Positives = 53/78 (67%)
Frame = -3 / +1
Query: 538 MYYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVA 359
M+ E +GEI+ V+QPS E QQ H+QKALAE+YLLS D I S+ STFGYVA
Sbjct: 1111 MFSERANMTGEIIKVYQPSGERYQQTDKKVHDQKALAEMYLLSLTDNIVASSRSTFGYVA 1290
Query: 358 YSFAGVKPWILIRPDWNR 305
YS G+KPW+L P+ N+
Sbjct: 1291 YSLGGLKPWLLYLPNDNK 1344
Score = 39.6 bits (80), Expect(3) = 7e-028
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -3 / +1
Query: 310 NRETSDVACVRSTSVEPCLHSPPILGC 230
+ + D CVRSTS+EPC +PP GC
Sbjct: 1336 DNKAPDPPCVRSTSMEPCFLTPPTHGC 1416
Score = 24.0 bits (46), Expect(3) = 7e-028
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -3 / +1
Query: 199 VKPYVRHCEDV 167
V P+VR+CED+
Sbjct: 1450 VVPFVRYCEDI 1482
>gb|AF417474.1|AF417474 Arabidopsis thaliana fucosyltransferase-like protein FUT4 (FUT4)
mRNA, complete cds
Length = 1512
Score = 100 bits (212), Expect(3) = 7e-028
Identities = 42/78 (53%), Positives = 53/78 (67%)
Frame = -3 / +1
Query: 538 MYYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVA 359
M+ E +GEI+ V+QPS E QQ H+QKALAE+YLLS D I S+ STFGYVA
Sbjct: 1111 MFSERANMTGEIIKVYQPSGERYQQTDKKVHDQKALAEMYLLSLTDNIVASSRSTFGYVA 1290
Query: 358 YSFAGVKPWILIRPDWNR 305
YS G+KPW+L P+ N+
Sbjct: 1291 YSLGGLKPWLLYLPNDNK 1344
Score = 39.6 bits (80), Expect(3) = 7e-028
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -3 / +1
Query: 310 NRETSDVACVRSTSVEPCLHSPPILGC 230
+ + D CVRSTS+EPC +PP GC
Sbjct: 1336 DNKAPDPPCVRSTSMEPCFLTPPTHGC 1416
Score = 24.0 bits (46), Expect(3) = 7e-028
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -3 / +1
Query: 199 VKPYVRHCEDV 167
V P+VR+CED+
Sbjct: 1450 VVPFVRYCEDI 1482
>emb|AX412254.1| Sequence 18 from Patent WO0222675
Length = 1512
Score = 100 bits (212), Expect(3) = 7e-028
Identities = 42/78 (53%), Positives = 53/78 (67%)
Frame = -3 / +1
Query: 538 MYYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVA 359
M+ E +GEI+ V+QPS E QQ H+QKALAE+YLLS D I S+ STFGYVA
Sbjct: 1111 MFSERANMTGEIIKVYQPSGERYQQTDKKVHDQKALAEMYLLSLTDNIVASSRSTFGYVA 1290
Query: 358 YSFAGVKPWILIRPDWNR 305
YS G+KPW+L P+ N+
Sbjct: 1291 YSLGGLKPWLLYLPNDNK 1344
Score = 39.6 bits (80), Expect(3) = 7e-028
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -3 / +1
Query: 310 NRETSDVACVRSTSVEPCLHSPPILGC 230
+ + D CVRSTS+EPC +PP GC
Sbjct: 1336 DNKAPDPPCVRSTSMEPCFLTPPTHGC 1416
Score = 24.0 bits (46), Expect(3) = 7e-028
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -3 / +1
Query: 199 VKPYVRHCEDV 167
V P+VR+CED+
Sbjct: 1450 VVPFVRYCEDI 1482
>emb|AX412452.1| Sequence 216 from Patent WO0222675
Length = 1512
Score = 100 bits (212), Expect(3) = 7e-028
Identities = 42/78 (53%), Positives = 53/78 (67%)
Frame = -3 / +1
Query: 538 MYYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVA 359
M+ E +GEI+ V+QPS E QQ H+QKALAE+YLLS D I S+ STFGYVA
Sbjct: 1111 MFSERANMTGEIIKVYQPSGERYQQTDKKVHDQKALAEMYLLSLTDNIVASSRSTFGYVA 1290
Query: 358 YSFAGVKPWILIRPDWNR 305
YS G+KPW+L P+ N+
Sbjct: 1291 YSLGGLKPWLLYLPNDNK 1344
Score = 39.6 bits (80), Expect(3) = 7e-028
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -3 / +1
Query: 310 NRETSDVACVRSTSVEPCLHSPPILGC 230
+ + D CVRSTS+EPC +PP GC
Sbjct: 1336 DNKAPDPPCVRSTSMEPCFLTPPTHGC 1416
Score = 24.0 bits (46), Expect(3) = 7e-028
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -3 / +1
Query: 199 VKPYVRHCEDV 167
V P+VR+CED+
Sbjct: 1450 VVPFVRYCEDI 1482
>emb|AX412825.1| Sequence 589 from Patent WO0222675
Length = 1512
Score = 100 bits (212), Expect(3) = 7e-028
Identities = 42/78 (53%), Positives = 53/78 (67%)
Frame = -3 / +1
Query: 538 MYYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVA 359
M+ E +GEI+ V+QPS E QQ H+QKALAE+YLLS D I S+ STFGYVA
Sbjct: 1111 MFSERANMTGEIIKVYQPSGERYQQTDKKVHDQKALAEMYLLSLTDNIVASSRSTFGYVA 1290
Query: 358 YSFAGVKPWILIRPDWNR 305
YS G+KPW+L P+ N+
Sbjct: 1291 YSLGGLKPWLLYLPNDNK 1344
Score = 39.6 bits (80), Expect(3) = 7e-028
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -3 / +1
Query: 310 NRETSDVACVRSTSVEPCLHSPPILGC 230
+ + D CVRSTS+EPC +PP GC
Sbjct: 1336 DNKAPDPPCVRSTSMEPCFLTPPTHGC 1416
Score = 24.0 bits (46), Expect(3) = 7e-028
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -3 / +1
Query: 199 VKPYVRHCEDV 167
V P+VR+CED+
Sbjct: 1450 VVPFVRYCEDI 1482
>emb|AX507295.1| Sequence 1990 from Patent WO0216655
Length = 1512
Score = 100 bits (212), Expect(3) = 7e-028
Identities = 42/78 (53%), Positives = 53/78 (67%)
Frame = -3 / +1
Query: 538 MYYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVA 359
M+ E +GEI+ V+QPS E QQ H+QKALAE+YLLS D I S+ STFGYVA
Sbjct: 1111 MFSERANMTGEIIKVYQPSGERYQQTDKKVHDQKALAEMYLLSLTDNIVASSRSTFGYVA 1290
Query: 358 YSFAGVKPWILIRPDWNR 305
YS G+KPW+L P+ N+
Sbjct: 1291 YSLGGLKPWLLYLPNDNK 1344
Score = 39.6 bits (80), Expect(3) = 7e-028
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -3 / +1
Query: 310 NRETSDVACVRSTSVEPCLHSPPILGC 230
+ + D CVRSTS+EPC +PP GC
Sbjct: 1336 DNKAPDPPCVRSTSMEPCFLTPPTHGC 1416
Score = 24.0 bits (46), Expect(3) = 7e-028
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -3 / +1
Query: 199 VKPYVRHCEDV 167
V P+VR+CED+
Sbjct: 1450 VVPFVRYCEDI 1482
>emb|AX651291.1| Sequence 76 from Patent WO03000898
Length = 1512
Score = 100 bits (212), Expect(3) = 7e-028
Identities = 42/78 (53%), Positives = 53/78 (67%)
Frame = -3 / +1
Query: 538 MYYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVA 359
M+ E +GEI+ V+QPS E QQ H+QKALAE+YLLS D I S+ STFGYVA
Sbjct: 1111 MFSERANMTGEIIKVYQPSGERYQQTDKKVHDQKALAEMYLLSLTDNIVASSRSTFGYVA 1290
Query: 358 YSFAGVKPWILIRPDWNR 305
YS G+KPW+L P+ N+
Sbjct: 1291 YSLGGLKPWLLYLPNDNK 1344
Score = 39.6 bits (80), Expect(3) = 7e-028
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -3 / +1
Query: 310 NRETSDVACVRSTSVEPCLHSPPILGC 230
+ + D CVRSTS+EPC +PP GC
Sbjct: 1336 DNKAPDPPCVRSTSMEPCFLTPPTHGC 1416
Score = 24.0 bits (46), Expect(3) = 7e-028
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -3 / +1
Query: 199 VKPYVRHCEDV 167
V P+VR+CED+
Sbjct: 1450 VVPFVRYCEDI 1482
>emb|BX821778.1|CNS0A985 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL73ZB11 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 802
Score = 100 bits (212), Expect(3) = 7e-028
Identities = 42/78 (53%), Positives = 53/78 (67%)
Frame = -3 / +1
Query: 538 MYYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVA 359
M+ E +GEI+ V+QPS E QQ H+QKALAE+YLLS D I S+ STFGYVA
Sbjct: 316 MFSERANMTGEIIKVYQPSGERYQQTDKKVHDQKALAEMYLLSLTDNIVASSRSTFGYVA 495
Query: 358 YSFAGVKPWILIRPDWNR 305
YS G+KPW+L P+ N+
Sbjct: 496 YSLGGLKPWLLYLPNDNK 549
Score = 39.6 bits (80), Expect(3) = 7e-028
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -3 / +1
Query: 310 NRETSDVACVRSTSVEPCLHSPPILGC 230
+ + D CVRSTS+EPC +PP GC
Sbjct: 541 DNKAPDPPCVRSTSMEPCFLTPPTHGC 621
Score = 24.0 bits (46), Expect(3) = 7e-028
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -3 / +1
Query: 199 VKPYVRHCEDV 167
V P+VR+CED+
Sbjct: 655 VVPFVRYCEDI 687
>ref|NM_101276.2| Arabidopsis thaliana fucosyltransferase/ transferase, transferring
glycosyl groups AT1G14110 mRNA, complete cds
Length = 2724
Score = 100 bits (212), Expect(3) = 2e-027
Identities = 41/74 (55%), Positives = 52/74 (70%)
Frame = -3 / +1
Query: 538 MYYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVA 359
MY++ P+ +GEI+ ++QPS E QQ + H+QKALAEIYLLS D I S STFGYVA
Sbjct: 1162 MYWKGPSSTGEIIQIYQPSQEIYQQTDNKLHDQKALAEIYLLSLTDYIVTSDSSTFGYVA 1341
Query: 358 YSFAGVKPWILIRP 317
G+KPWIL +P
Sbjct: 1342 QGLGGLKPWILYKP 1383
Score = 40.0 bits (81), Expect(3) = 2e-027
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = -3 / +1
Query: 310 NRETSDVACVRSTSVEPCLHSPPILGCRAKT 218
+++T + CVR+ S+EPC P+ GC+AKT
Sbjct: 2551 DKKTPNPPCVRAMSMEPCFLRAPLHGCQAKT 2643
Score = 28.1 bits (55), Expect(3) = 2e-027
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -3 / +1
Query: 199 VKPYVRHCEDVGFGLKLFD 143
+ P+VR CED GLKL D
Sbjct: 2650 IPPFVRICEDWKTGLKLVD 2706
>gb|CD532606.1|CD532606 28B13 Arabidopsis Leaf Senescence Library Arabidopsis thaliana cDNA
3', mRNA sequence
Length = 454
Score = 96.4 bits (204), Expect(3) = 8e-027
Identities = 40/70 (57%), Positives = 50/70 (71%)
Frame = -3 / +1
Query: 514 SGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVAYSFAGVKP 335
+GEI+ V+QPS E QQ H+QKALAE+YLLS D I S+ STFGYVAYS G+KP
Sbjct: 13 TGEIIKVYQPSGERYQQTDKKVHDQKALAEMYLLSLTDNIVASSRSTFGYVAYSLGGLKP 192
Query: 334 WILIRPDWNR 305
W+L P+ N+
Sbjct: 193 WLLYLPNDNK 222
Score = 39.6 bits (80), Expect(3) = 8e-027
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -3 / +1
Query: 310 NRETSDVACVRSTSVEPCLHSPPILGC 230
+ + D CVRSTS+EPC +PP GC
Sbjct: 214 DNKAPDPPCVRSTSMEPCFLTPPTHGC 294
Score = 24.0 bits (46), Expect(3) = 8e-027
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -3 / +1
Query: 199 VKPYVRHCEDV 167
V P+VR+CED+
Sbjct: 328 VVPFVRYCEDI 360
>gb|B18679.1|B18679 F16A14-T7 IGF Arabidopsis thaliana genomic clone F16A14, DNA
sequence
Length = 786
Score = 97.7 bits (207), Expect(2) = 1e-023
Identities = 41/74 (55%), Positives = 50/74 (67%)
Frame = -3 / -2
Query: 538 MYYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVA 359
MY+E P+ +GEI+ V QPS E Q H+QKALAE YLLS DKI SA ST GYVA
Sbjct: 497 MYWERPSSAGEIIEVXQPSGERVQXTDKKXHDQKALAEXYLLSLTDKIVTSARSTXGYVA 318
Query: 358 YSFAGVKPWILIRP 317
+ G+KPW+L +P
Sbjct: 317 HILGGLKPWLLYQP 276
Score = 33.6 bits (67), Expect(2) = 1e-023
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = -3 / -2
Query: 307 RETSDVACVRSTSVEPCLHSPPILGCRAKTDVDVAAVKPYVRHCEDVG 164
R D ++STS++ + P GC + + V P RHCED G
Sbjct: 269 RTAPDPQXIQSTSMDHXHLTLPSHGCEPEWGTNSGKVVPLXRHCEDRG 126
>ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complete sequence
Length = 19705359
Score = 111 bits (237), Expect = 2e-023
Identities = 45/75 (60%), Positives = 52/75 (69%)
Frame = -3 / -2
Query: 538 MYYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVA 359
MY+E PT +GEI+ V QPS E QQ HN KALAE+YLLS D + SAWSTFGYVA
Sbjct: 970790 MYWEYPTSTGEIIGVHQPSQEGYQQTEKKMHNGKALAEMYLLSLTDNLVTSAWSTFGYVA 970611
Query: 358 YSFAGVKPWILIRPD 314
G+KPWIL RP+
Sbjct: 970610 QGLGGLKPWILYRPE 970566
Score = 106 bits (227), Expect = 4e-022
Identities = 41/74 (55%), Positives = 52/74 (70%)
Frame = -3 / -3
Query: 538 MYYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVA 359
M+ P+ +GEI+ V+QPS E QQ H+QKALAE+YLLS D I S WSTFGYV+
Sbjct: 6695626 MFLARPSSTGEIIEVYQPSAERVQQTDKKSHDQKALAEMYLLSLTDNIVTSGWSTFGYVS 6695447
Query: 358 YSFAGVKPWILIRP 317
YS G+KPW+L +P
Sbjct: 6695446 YSLGGLKPWLLYQP 6695405
Score = 103 bits (219), Expect = 5e-021
Identities = 42/74 (56%), Positives = 53/74 (71%)
Frame = -3 / -3
Query: 538 MYYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVA 359
M+ + P+ +GEIV V+QPS E QQ H+QKALAE+YLLS D I SA STFGYV+
Sbjct: 6705586 MFSKRPSSTGEIVEVYQPSGERVQQTDKKSHDQKALAEMYLLSLTDNIVTSARSTFGYVS 6705407
Query: 358 YSFAGVKPWILIRP 317
YS G+KPW+L +P
Sbjct: 6705406 YSLGGLKPWLLYQP 6705365
>gb|AV807820.1|AV807820 AV807820 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-52-C06 3',
mRNA sequence
Length = 443
Score = 58.8 bits (122), Expect(3) = 5e-023
Identities = 23/42 (54%), Positives = 27/42 (64%)
Frame = -3 / -3
Query: 439 KALAEIYLLSYCDKITMSAWSTFGYVAYSFAGVKPWILIRPD 314
+ALA IYLLS D + SAWSTF Y+A PWIL RP+
Sbjct: 438 QALAGIYLLSLTDNLVTSAWSTFAYLAQGLGAFNPWILYRPE 313
Score = 45.1 bits (92), Expect(3) = 5e-023
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = -3 / -1
Query: 229 RAKTDVDVAAVKPYVRHCEDVGFGLKL 149
+AKT +D + P+VRHCED+ +GLKL
Sbjct: 230 KAKTGIDTGTLVPHVRHCEDISWGLKL 150
Score = 43.2 bits (88), Expect(3) = 5e-023
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -3 / -3
Query: 310 NRETSDVACVRSTSVEPCLHSPPILGCRAK 221
NR T D +C R S+EPC HSPP C +
Sbjct: 312 NRTTPDPSCGRPMSMEPCFHSPPFYDCEGE 223
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 107 bits (229), Expect = 2e-022
Identities = 44/74 (59%), Positives = 55/74 (74%)
Frame = -3 / +3
Query: 538 MYYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVA 359
MY+E P+ +GEI+ V+QPS E QQ H+QKALAE+YLLS DKI SA STFGYVA
Sbjct: 4823811 MYWERPSSTGEIIEVYQPSGERVQQTDKKLHDQKALAEMYLLSLTDKIVTSARSTFGYVA 4823990
Query: 358 YSFAGVKPWILIRP 317
+S G+KPW+L +P
Sbjct: 4823991 HSLGGLKPWLLYQP 4824032
Score = 105 bits (223), Expect = 1e-021
Identities = 44/74 (59%), Positives = 52/74 (70%)
Frame = -3 / +3
Query: 538 MYYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVA 359
MY+E PT +G+IV V+QPS E QQ H+QKALAE+YLLS DK+ SA STFGYVA
Sbjct: 4819731 MYWEHPTTTGDIVEVYQPSRERFQQTDKKLHDQKALAEMYLLSLTDKLVTSALSTFGYVA 4819910
Query: 358 YSFAGVKPWILIRP 317
G+KPWIL P
Sbjct: 4819911 QGLGGLKPWILYTP 4819952
>gb|BP793185.1|BP793185 BP793185 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-55-D21 3',
mRNA sequence
Length = 407
Score = 78.0 bits (164), Expect(2) = 3e-021
Identities = 30/45 (66%), Positives = 34/45 (75%)
Frame = -3 / -3
Query: 448 HNQKALAEIYLLSYCDKITMSAWSTFGYVAYSFAGVKPWILIRPD 314
HN KALAE+YLLS D + SAWSTFGYVA G+KPWIL RP+
Sbjct: 393 HNGKALAEMYLLSLTDNLVTSAWSTFGYVAQGLGGLKPWILYRPE 259
Score = 45.1 bits (92), Expect(2) = 3e-021
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = -3 / -1
Query: 229 RAKTDVDVAAVKPYVRHCEDVGFGLKL 149
+AKT +D + P+VRHCED+ +GLKL
Sbjct: 173 KAKTGIDTGTLVPHVRHCEDISWGLKL 93
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 926,572,503
Number of Sequences: 1013581
Number of extensions: 10729658
Number of successful extensions: 202118
Number of sequences better than 1.0e-020: 49
length of database: 302,980,290
effective HSP length: 55
effective length of database: 247,233,335
effective search space used: 31893100215
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)