TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3536697.2.1
(651 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
emb|Z49239.1|ATD18MR A.thaliana mRNA for putative dTDP-gluc... 268 1e-070
gb|AY050389.1| Arabidopsis thaliana AT3g62830/F26K9_260 mRN... 268 1e-070
gb|AF361617.1| Arabidopsis thaliana AT3g62830/F26K9_260 mRN... 268 1e-070
gb|AY143897.1| Arabidopsis thaliana At3g62830/F26K9_260 mRN... 268 1e-070
gb|AF387788.1| Arabidopsis thaliana UDP-glucuronic acid dec... 268 1e-070
emb|BX825822.1|CNS0A4P6 Arabidopsis thaliana Full-length cD... 268 1e-070
ref|NM_116148.1| Arabidopsis thaliana UXS2 (UDP-GLUCURONIC ... 268 1e-070
gb|CB185735.2|CB185735 EST00661 Arabidopsis avirulent Pseud... 267 2e-070
gb|AV782529.1|AV782529 AV782529 RAFL4 Arabidopsis thaliana ... 265 7e-070
gb|AV521021.1|AV521021 AV521021 Arabidopsis thaliana aboveg... 265 7e-070
gb|AV533768.1|AV533768 AV533768 Arabidopsis thaliana flower... 265 7e-070
gb|AV537418.1|AV537418 AV537418 Arabidopsis thaliana roots ... 265 7e-070
emb|AX505495.1| Sequence 190 from Patent WO0216655 265 7e-070
gb|BT022016.1| Arabidopsis thaliana At2g47650 gene, complet... 265 7e-070
ref|NM_130333.1| Arabidopsis thaliana UXS4 (UDP-XYLOSE SYNT... 265 7e-070
gb|AV541133.1|AV541133 AV541133 Arabidopsis thaliana roots ... 264 1e-069
gb|AV538824.1|AV538824 AV538824 Arabidopsis thaliana roots ... 250 3e-065
gb|AV782290.1|AV782290 AV782290 RAFL4 Arabidopsis thaliana ... 244 2e-063
gb|AY065075.1| Arabidopsis thaliana dTDP-glucose 4-6-dehydr... 244 2e-063
gb|BT003355.1| Arabidopsis thaliana dTDP-glucose 4-6-dehydr... 244 2e-063
ref|NM_115212.2| Arabidopsis thaliana UXS1 (UDP-GLUCURONIC ... 244 2e-063
emb|BX823214.1|CNS0A7KG Arabidopsis thaliana Full-length cD... 241 2e-062
gb|AV541838.1|AV541838 AV541838 Arabidopsis thaliana roots ... 239 5e-062
emb|BX822635.1|CNS0A7MG Arabidopsis thaliana Full-length cD... 236 5e-061
gb|CB260122.1|CB260122 94-E9601-013-003-K24-t7r MPIZ-ADIS-0... 234 2e-060
gb|BX834349.1|BX834349 BX834349 Arabidopsis thaliana Adult ... 229 6e-059
ref|NM_180363.1| Arabidopsis thaliana UXS1 (UDP-GLUCURONIC ... 182 2e-057
emb|AL162651.1|ATF26K9 Arabidopsis thaliana DNA chromosome ... 137 5e-057
gb|AF387787.1| Arabidopsis thaliana UDP-glucuronic acid dec... 182 6e-057
gb|AC002535.3| Arabidopsis thaliana chromosome 2 clone T30B... 132 2e-055
gb|AC005309.3| Arabidopsis thaliana chromosome 2 clone F17A... 132 2e-055
emb|BX823176.1|CNS0A7M4 Arabidopsis thaliana Full-length cD... 188 2e-054
gb|BP571979.1|BP571979 BP571979 RAFL14 Arabidopsis thaliana... 203 4e-051
gb|BP585895.1|BP585895 BP585895 RAFL15 Arabidopsis thaliana... 203 6e-051
gb|BP582514.1|BP582514 BP582514 RAFL14 Arabidopsis thaliana... 199 1e-049
gb|N38350.1|N38350 19577 Lambda-PRL2 Arabidopsis thaliana c... 194 2e-048
emb|AL132966.1|ATF4P12 Arabidopsis thaliana DNA chromosome ... 124 2e-048
gb|AV553003.1|AV553003 AV553003 Arabidopsis thaliana roots ... 192 1e-047
emb|BX824800.1|CNS0A7L3 Arabidopsis thaliana Full-length cD... 190 4e-047
gb|AQ969939.1|AQ969939 LERJR50TF LERG Arabidopsis thaliana ... 132 2e-046
gb|AY099703.1| Arabidopsis thaliana putative nucleotide-sug... 187 4e-046
gb|AY128899.1| Arabidopsis thaliana putative nucleotide-sug... 187 4e-046
emb|AX506427.1| Sequence 1122 from Patent WO0216655 187 4e-046
ref|NM_128436.3| Arabidopsis thaliana NAD binding / catalyt... 187 4e-046
ref|NM_201826.1| Arabidopsis thaliana NAD binding / catalyt... 187 4e-046
gb|AV439961.1|AV439961 AV439961 Arabidopsis thaliana above-... 183 5e-045
gb|CK121683.1|CK121683 202b24.p1 AtM1 Arabidopsis thaliana ... 183 5e-045
gb|AY072098.1| Arabidopsis thaliana putative dTDP-glucose 4... 183 5e-045
gb|AY096586.1| Arabidopsis thaliana putative dTDP-glucose 4... 183 5e-045
gb|AY087118.1| Arabidopsis thaliana clone 31901 mRNA, compl... 183 5e-045
ref|NM_114511.2| Arabidopsis thaliana UXS5; catalytic AT3G4... 183 5e-045
ref|NM_001035743.1| Arabidopsis thaliana UXS5; catalytic AT... 183 5e-045
gb|AV782870.1|AV782870 AV782870 RAFL5 Arabidopsis thaliana ... 182 1e-044
gb|AV540797.1|AV540797 AV540797 Arabidopsis thaliana roots ... 182 1e-044
gb|AV567402.1|AV567402 AV567402 Arabidopsis thaliana green ... 182 1e-044
gb|AF375442.1| Arabidopsis thaliana AT5g59290/mnc17_180 mRN... 182 1e-044
gb|AY093958.1| Arabidopsis thaliana AT5g59290/mnc17_180 mRN... 182 1e-044
gb|AF387789.1| Arabidopsis thaliana UDP-glucuronic acid dec... 182 1e-044
gb|AY088443.1| Arabidopsis thaliana clone 6701 mRNA, comple... 182 1e-044
emb|BX832416.1|CNS0A12Y Arabidopsis thaliana Full-length cD... 182 1e-044
ref|NM_125319.2| Arabidopsis thaliana UXS3 (UDP-GLUCURONIC ... 182 1e-044
emb|BX824968.1|CNS0A6QT Arabidopsis thaliana Full-length cD... 181 2e-044
emb|BX823718.1|CNS0A7QP Arabidopsis thaliana Full-length cD... 180 4e-044
gb|AI100480.1|AI100480 34855 Lambda-PRL2 Arabidopsis thalia... 122 2e-043
gb|BP647688.1|BP647688 BP647688 RAFL19 Arabidopsis thaliana... 177 3e-043
gb|AQ969940.1|AQ969940 LERJR50TR LERG Arabidopsis thaliana ... 121 1e-042
gb|AV814478.1|AV814478 AV814478 RAFL9 Arabidopsis thaliana ... 174 2e-042
gb|BP643420.1|BP643420 BP643420 RAFL19 Arabidopsis thaliana... 158 6e-042
gb|BP575347.1|BP575347 BP575347 RAFL14 Arabidopsis thaliana... 154 3e-041
emb|BX818916.1|CNS0A9UJ Arabidopsis thaliana Full-length cD... 148 3e-040
gb|CD530058.1|CD530058 27F15 Arabidopsis Leaf Senescence Li... 166 6e-040
gb|AI998241.1|AI998241 701544888 A. thaliana, Columbia Col-... 164 2e-039
gb|CB255558.1|CB255558 38-E010697-019-002-K10-T7R MPIZ-ADIS... 120 2e-038
gb|AQ967293.1|AQ967293 LERIQ83TF LERG Arabidopsis thaliana ... 101 3e-037
gb|AV542304.1|AV542304 AV542304 Arabidopsis thaliana roots ... 156 7e-037
gb|AV820936.1|AV820936 AV820936 RAFL11 Arabidopsis thaliana... 153 4e-036
gb|BP592035.1|BP592035 BP592035 RAFL15 Arabidopsis thaliana... 150 3e-035
gb|AV799638.1|AV799638 AV799638 RAFL9 Arabidopsis thaliana ... 149 6e-035
gb|AV540354.1|AV540354 AV540354 Arabidopsis thaliana roots ... 149 6e-035
emb|AL133298.1|ATF18L15 Arabidopsis thaliana DNA chromosome... 86 1e-034
gb|H76303.1|H76303 18008 Lambda-PRL2 Arabidopsis thaliana c... 148 1e-034
gb|BP647831.1|BP647831 BP647831 RAFL19 Arabidopsis thaliana... 148 2e-034
gb|AV520322.1|AV520322 AV520322 Arabidopsis thaliana aboveg... 147 3e-034
gb|AV820517.1|AV820517 AV820517 RAFL11 Arabidopsis thaliana... 146 7e-034
dbj|AB016890.1| Arabidopsis thaliana genomic DNA, chromosom... 87 3e-033
gb|BP647617.1|BP647617 BP647617 RAFL19 Arabidopsis thaliana... 122 1e-031
gb|AV555999.1|AV555999 AV555999 Arabidopsis thaliana green ... 138 1e-031
gb|AV797607.1|AV797607 AV797607 RAFL9 Arabidopsis thaliana ... 137 4e-031
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 137 4e-031
ref|NM_116149.2| Arabidopsis thaliana unknown protein AT3G6... 137 4e-031
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 137 4e-031
gb|BP564295.1|BP564295 BP564295 RAFL14 Arabidopsis thaliana... 94 1e-030
gb|AQ967292.1|AQ967292 LERIQ82TR LERG Arabidopsis thaliana ... 132 1e-029
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 132 1e-029
gb|AC005727.3| Arabidopsis thaliana chromosome 2 clone F8N1... 88 2e-029
emb|BX822583.1|CNS0A63N Arabidopsis thaliana Full-length cD... 130 4e-029
gb|BP593145.1|BP593145 BP593145 RAFL15 Arabidopsis thaliana... 79 4e-029
gb|BP636677.1|BP636677 BP636677 RAFL19 Arabidopsis thaliana... 122 8e-029
gb|BP570100.1|BP570100 BP570100 RAFL14 Arabidopsis thaliana... 128 1e-028
gb|AV798167.1|AV798167 AV798167 RAFL9 Arabidopsis thaliana ... 128 2e-028
gb|BP647909.1|BP647909 BP647909 RAFL19 Arabidopsis thaliana... 118 4e-028
gb|BP647011.1|BP647011 BP647011 RAFL19 Arabidopsis thaliana... 110 5e-028
gb|BH848792.1|BH848792 SALK_068865.55.70.x Arabidopsis thal... 124 2e-027
gb|AV550208.1|AV550208 AV550208 Arabidopsis thaliana roots ... 123 4e-027
gb|BP569011.1|BP569011 BP569011 RAFL14 Arabidopsis thaliana... 123 4e-027
gb|BP590548.1|BP590548 BP590548 RAFL15 Arabidopsis thaliana... 120 4e-026
gb|AV788561.1|AV788561 AV788561 RAFL6 Arabidopsis thaliana ... 101 6e-026
gb|AV814122.1|AV814122 AV814122 RAFL9 Arabidopsis thaliana ... 69 9e-026
gb|AV817002.1|AV817002 AV817002 RAFL9 Arabidopsis thaliana ... 119 1e-025
gb|BX834336.1|BX834336 BX834336 Arabidopsis thaliana Adult ... 119 1e-025
gb|BP582319.1|BP582319 BP582319 RAFL14 Arabidopsis thaliana... 117 3e-025
gb|BP583408.1|BP583408 BP583408 RAFL14 Arabidopsis thaliana... 117 3e-025
gb|AA394355.1|AA394355 25938 Lambda-PRL2 Arabidopsis thalia... 107 2e-024
gb|BP611118.1|BP611118 BP611118 RAFL16 Arabidopsis thaliana... 114 3e-024
gb|AV789611.1|AV789611 AV789611 RAFL6 Arabidopsis thaliana ... 111 2e-023
gb|N37324.1|N37324 18551 Lambda-PRL2 Arabidopsis thaliana c... 83 3e-023
gb|BP598226.1|BP598226 BP598226 RAFL16 Arabidopsis thaliana... 110 4e-023
gb|BP565000.1|BP565000 BP565000 RAFL14 Arabidopsis thaliana... 108 6e-023
emb|AL082000.1|CNS00NJM Arabidopsis thaliana genome survey ... 109 8e-023
gb|BP609944.1|BP609944 BP609944 RAFL16 Arabidopsis thaliana... 73 2e-022
gb|BP655925.1|BP655925 BP655925 RAFL19 Arabidopsis thaliana... 97 4e-022
gb|BP619229.1|BP619229 BP619229 RAFL16 Arabidopsis thaliana... 91 7e-022
gb|AA597983.1|AA597983 29232 Lambda-PRL2 Arabidopsis thalia... 104 4e-021
gb|BP641012.1|BP641012 BP641012 RAFL19 Arabidopsis thaliana... 102 9e-021
>emb|Z49239.1|ATD18MR A.thaliana mRNA for putative dTDP-glucose 4-6-dehydratases
Length = 1660
Score = 268 bits (580), Expect = 1e-070
Identities = 107/129 (82%), Positives = 121/129 (93%)
Frame = +3 / +2
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQALRKEPLTVYGDGKQTRSFQ+VSDLVEGLM+LMEGEH+GPFNLGNPGEF+MLELAKV
Sbjct: 1061 VAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAKV 1240
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFG 365
VQ+TIDP A+IEFRPNT DDPHKRKPDI++AKELLGWEPKV LR+GLP MV DFR+R+FG
Sbjct: 1241 VQETIDPNANIEFRPNTEDDPHKRKPDITKAKELLGWEPKVSLRQGLPLMVKDFRQRVFG 1420
Query: 366 DQEGSTESA 392
DQ+ + +A
Sbjct: 1421 DQKEGSSAA 1447
Score = 203 bits (438), Expect = 4e-051
Identities = 91/122 (74%), Positives = 100/122 (81%)
Frame = -3 / -2
Query: 370 WSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVS 191
WSPK R RKS+TMRG P RR T GSQP+SS A +MSG L GSS+VFG NSM A GS+VS
Sbjct: 1425 WSPKTR*RKSLTMRGSP*RRETFGSQPKSSLAFVMSGFLL*GSSSVFGLNSMFAFGSIVS 1246
Query: 190 WTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA* 11
WTTLASSS++NSPGLPRLNGP CSPS+S I PST+SET KLLVC PSP*TV GSFLSA
Sbjct: 1245 WTTLASSSIVNSPGLPRLNGPTCSPSISLIKPSTRSETNWKLLVCFPSP*TVNGSFLSAC 1066
Query: 10 AT 5
AT
Sbjct: 1065 AT 1060
Score = 122 bits (260), Expect = 1e-026
Identities = 57/126 (45%), Positives = 83/126 (65%)
Frame = -2 / -1
Query: 383 GGPFLVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLW 204
G LV +DT E+ DH ++LT+ +L P +LF DVRL+LVR++ V +EL V +
Sbjct: 1438 GAFLLVTKDTLTEIFDHERQSLTKRDLWFPT*KLFGLCDVRLSLVRVVFCVWSELYVCIR 1259
Query: 203 VDGVLDHLSQLQHAEFSRVAEVERPNVLPFHELHQPFHQI*DILKAPSLLAITIDCQRLL 24
++ +LDHLS+L+H EF+RV EVE ++ FH+ HQ F+QI + L+ P LL IT++ Q L
Sbjct: 1258 INCLLDHLSELEHREFTRVTEVEWADMFTFHQSHQTFNQIRNKLETPCLLPITVNSQWLF 1079
Query: 23 PQRLSN 6
P L N
Sbjct: 1078 P*CLCN 1061
>gb|AY050389.1| Arabidopsis thaliana AT3g62830/F26K9_260 mRNA, complete cds
Length = 1701
Score = 268 bits (580), Expect = 1e-070
Identities = 107/129 (82%), Positives = 121/129 (93%)
Frame = +3 / +1
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQALRKEPLTVYGDGKQTRSFQ+VSDLVEGLM+LMEGEH+GPFNLGNPGEF+MLELAKV
Sbjct: 1075 VAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAKV 1254
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFG 365
VQ+TIDP A+IEFRPNT DDPHKRKPDI++AKELLGWEPKV LR+GLP MV DFR+R+FG
Sbjct: 1255 VQETIDPNANIEFRPNTEDDPHKRKPDITKAKELLGWEPKVSLRQGLPLMVKDFRQRVFG 1434
Query: 366 DQEGSTESA 392
DQ+ + +A
Sbjct: 1435 DQKEGSSAA 1461
Score = 203 bits (438), Expect = 4e-051
Identities = 91/122 (74%), Positives = 100/122 (81%)
Frame = -3 / -2
Query: 370 WSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVS 191
WSPK R RKS+TMRG P RR T GSQP+SS A +MSG L GSS+VFG NSM A GS+VS
Sbjct: 1439 WSPKTR*RKSLTMRGSP*RRETFGSQPKSSLAFVMSGFLL*GSSSVFGLNSMFAFGSIVS 1260
Query: 190 WTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA* 11
WTTLASSS++NSPGLPRLNGP CSPS+S I PST+SET KLLVC PSP*TV GSFLSA
Sbjct: 1259 WTTLASSSIVNSPGLPRLNGPTCSPSISLIKPSTRSETNWKLLVCFPSP*TVNGSFLSAC 1080
Query: 10 AT 5
AT
Sbjct: 1079 AT 1074
Score = 122 bits (260), Expect = 1e-026
Identities = 57/126 (45%), Positives = 83/126 (65%)
Frame = -2 / -1
Query: 383 GGPFLVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLW 204
G LV +DT E+ DH ++LT+ +L P +LF DVRL+LVR++ V +EL V +
Sbjct: 1452 GAFLLVTKDTLTEIFDHERQSLTKRDLWFPT*KLFGLCDVRLSLVRVVFCVWSELYVCIR 1273
Query: 203 VDGVLDHLSQLQHAEFSRVAEVERPNVLPFHELHQPFHQI*DILKAPSLLAITIDCQRLL 24
++ +LDHLS+L+H EF+RV EVE ++ FH+ HQ F+QI + L+ P LL IT++ Q L
Sbjct: 1272 INCLLDHLSELEHREFTRVTEVEWADMFSFHQSHQTFNQIRNKLETPCLLPITVNSQWLF 1093
Query: 23 PQRLSN 6
P L N
Sbjct: 1092 P*CLCN 1075
>gb|AF361617.1| Arabidopsis thaliana AT3g62830/F26K9_260 mRNA, complete cds
Length = 1663
Score = 268 bits (580), Expect = 1e-070
Identities = 107/129 (82%), Positives = 121/129 (93%)
Frame = +3 / +1
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQALRKEPLTVYGDGKQTRSFQ+VSDLVEGLM+LMEGEH+GPFNLGNPGEF+MLELAKV
Sbjct: 1075 VAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAKV 1254
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFG 365
VQ+TIDP A+IEFRPNT DDPHKRKPDI++AKELLGWEPKV LR+GLP MV DFR+R+FG
Sbjct: 1255 VQETIDPNANIEFRPNTEDDPHKRKPDITKAKELLGWEPKVSLRQGLPLMVKDFRQRVFG 1434
Query: 366 DQEGSTESA 392
DQ+ + +A
Sbjct: 1435 DQKEGSSAA 1461
Score = 203 bits (438), Expect = 4e-051
Identities = 91/122 (74%), Positives = 100/122 (81%)
Frame = -3 / -3
Query: 370 WSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVS 191
WSPK R RKS+TMRG P RR T GSQP+SS A +MSG L GSS+VFG NSM A GS+VS
Sbjct: 1439 WSPKTR*RKSLTMRGSP*RRETFGSQPKSSLAFVMSGFLL*GSSSVFGLNSMFAFGSIVS 1260
Query: 190 WTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA* 11
WTTLASSS++NSPGLPRLNGP CSPS+S I PST+SET KLLVC PSP*TV GSFLSA
Sbjct: 1259 WTTLASSSIVNSPGLPRLNGPTCSPSISLIKPSTRSETNWKLLVCFPSP*TVNGSFLSAC 1080
Query: 10 AT 5
AT
Sbjct: 1079 AT 1074
Score = 122 bits (260), Expect = 1e-026
Identities = 57/126 (45%), Positives = 83/126 (65%)
Frame = -2 / -2
Query: 383 GGPFLVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLW 204
G LV +DT E+ DH ++LT+ +L P +LF DVRL+LVR++ V +EL V +
Sbjct: 1452 GAFLLVTKDTLTEIFDHERQSLTKRDLWFPT*KLFGLCDVRLSLVRVVFCVWSELYVCIR 1273
Query: 203 VDGVLDHLSQLQHAEFSRVAEVERPNVLPFHELHQPFHQI*DILKAPSLLAITIDCQRLL 24
++ +LDHLS+L+H EF+RV EVE ++ FH+ HQ F+QI + L+ P LL IT++ Q L
Sbjct: 1272 INCLLDHLSELEHREFTRVTEVEWADMFTFHQSHQTFNQIRNKLETPCLLPITVNSQWLF 1093
Query: 23 PQRLSN 6
P L N
Sbjct: 1092 P*CLCN 1075
>gb|AY143897.1| Arabidopsis thaliana At3g62830/F26K9_260 mRNA, complete cds
Length = 1338
Score = 268 bits (580), Expect = 1e-070
Identities = 107/129 (82%), Positives = 121/129 (93%)
Frame = +3 / +1
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQALRKEPLTVYGDGKQTRSFQ+VSDLVEGLM+LMEGEH+GPFNLGNPGEF+MLELAKV
Sbjct: 922 VAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAKV 1101
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFG 365
VQ+TIDP A+IEFRPNT DDPHKRKPDI++AKELLGWEPKV LR+GLP MV DFR+R+FG
Sbjct: 1102 VQETIDPNANIEFRPNTEDDPHKRKPDITKAKELLGWEPKVSLRQGLPLMVKDFRQRVFG 1281
Query: 366 DQEGSTESA 392
DQ+ + +A
Sbjct: 1282 DQKEGSSAA 1308
Score = 203 bits (438), Expect = 4e-051
Identities = 91/122 (74%), Positives = 100/122 (81%)
Frame = -3 / -2
Query: 370 WSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVS 191
WSPK R RKS+TMRG P RR T GSQP+SS A +MSG L GSS+VFG NSM A GS+VS
Sbjct: 1286 WSPKTR*RKSLTMRGSP*RRETFGSQPKSSLAFVMSGFLL*GSSSVFGLNSMFAFGSIVS 1107
Query: 190 WTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA* 11
WTTLASSS++NSPGLPRLNGP CSPS+S I PST+SET KLLVC PSP*TV GSFLSA
Sbjct: 1106 WTTLASSSIVNSPGLPRLNGPTCSPSISLIKPSTRSETNWKLLVCFPSP*TVNGSFLSAC 927
Query: 10 AT 5
AT
Sbjct: 926 AT 921
Score = 122 bits (260), Expect = 1e-026
Identities = 57/126 (45%), Positives = 83/126 (65%)
Frame = -2 / -1
Query: 383 GGPFLVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLW 204
G LV +DT E+ DH ++LT+ +L P +LF DVRL+LVR++ V +EL V +
Sbjct: 1299 GAFLLVTKDTLTEIFDHERQSLTKRDLWFPT*KLFGLCDVRLSLVRVVFCVWSELYVCIR 1120
Query: 203 VDGVLDHLSQLQHAEFSRVAEVERPNVLPFHELHQPFHQI*DILKAPSLLAITIDCQRLL 24
++ +LDHLS+L+H EF+RV EVE ++ FH+ HQ F+QI + L+ P LL IT++ Q L
Sbjct: 1119 INCLLDHLSELEHREFTRVTEVEWADMFSFHQSHQTFNQIRNKLETPCLLPITVNSQWLF 940
Query: 23 PQRLSN 6
P L N
Sbjct: 939 P*CLCN 922
>gb|AF387788.1| Arabidopsis thaliana UDP-glucuronic acid decarboxylase (UXS2) mRNA,
complete cds
Length = 1338
Score = 268 bits (580), Expect = 1e-070
Identities = 107/129 (82%), Positives = 121/129 (93%)
Frame = +3 / +1
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQALRKEPLTVYGDGKQTRSFQ+VSDLVEGLM+LMEGEH+GPFNLGNPGEF+MLELAKV
Sbjct: 922 VAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAKV 1101
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFG 365
VQ+TIDP A+IEFRPNT DDPHKRKPDI++AKELLGWEPKV LR+GLP MV DFR+R+FG
Sbjct: 1102 VQETIDPNANIEFRPNTEDDPHKRKPDITKAKELLGWEPKVSLRQGLPLMVKDFRQRVFG 1281
Query: 366 DQEGSTESA 392
DQ+ + +A
Sbjct: 1282 DQKEGSSAA 1308
Score = 203 bits (438), Expect = 4e-051
Identities = 91/122 (74%), Positives = 100/122 (81%)
Frame = -3 / -2
Query: 370 WSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVS 191
WSPK R RKS+TMRG P RR T GSQP+SS A +MSG L GSS+VFG NSM A GS+VS
Sbjct: 1286 WSPKTR*RKSLTMRGSP*RRETFGSQPKSSLAFVMSGFLL*GSSSVFGLNSMFAFGSIVS 1107
Query: 190 WTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA* 11
WTTLASSS++NSPGLPRLNGP CSPS+S I PST+SET KLLVC PSP*TV GSFLSA
Sbjct: 1106 WTTLASSSIVNSPGLPRLNGPTCSPSISLIKPSTRSETNWKLLVCFPSP*TVNGSFLSAC 927
Query: 10 AT 5
AT
Sbjct: 926 AT 921
Score = 122 bits (260), Expect = 1e-026
Identities = 57/126 (45%), Positives = 83/126 (65%)
Frame = -2 / -1
Query: 383 GGPFLVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLW 204
G LV +DT E+ DH ++LT+ +L P +LF DVRL+LVR++ V +EL V +
Sbjct: 1299 GAFLLVTKDTLTEIFDHERQSLTKRDLWFPT*KLFGLCDVRLSLVRVVFCVWSELYVCIR 1120
Query: 203 VDGVLDHLSQLQHAEFSRVAEVERPNVLPFHELHQPFHQI*DILKAPSLLAITIDCQRLL 24
++ +LDHLS+L+H EF+RV EVE ++ FH+ HQ F+QI + L+ P LL IT++ Q L
Sbjct: 1119 INCLLDHLSELEHREFTRVTEVEWADMFTFHQSHQTFNQIRNKLETPCLLPITVNSQWLF 940
Query: 23 PQRLSN 6
P L N
Sbjct: 939 P*CLCN 922
>emb|BX825822.1|CNS0A4P6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL65ZB07 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 923
Score = 268 bits (580), Expect = 1e-070
Identities = 107/129 (82%), Positives = 121/129 (93%)
Frame = +3 / +2
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQALRKEPLTVYGDGKQTRSFQ+VSDLVEGLM+LMEGEH+GPFNLGNPGEF+MLELAKV
Sbjct: 293 VAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAKV 472
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFG 365
VQ+TIDP A+IEFRPNT DDPHKRKPDI++AKELLGWEPKV LR+GLP MV DFR+R+FG
Sbjct: 473 VQETIDPNANIEFRPNTEDDPHKRKPDITKAKELLGWEPKVSLRQGLPLMVKDFRQRVFG 652
Query: 366 DQEGSTESA 392
DQ+ + +A
Sbjct: 653 DQKEGSSAA 679
Score = 203 bits (438), Expect = 4e-051
Identities = 91/122 (74%), Positives = 100/122 (81%)
Frame = -3 / -3
Query: 370 WSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVS 191
WSPK R RKS+TMRG P RR T GSQP+SS A +MSG L GSS+VFG NSM A GS+VS
Sbjct: 657 WSPKTR*RKSLTMRGSP*RRETFGSQPKSSLAFVMSGFLL*GSSSVFGLNSMFAFGSIVS 478
Query: 190 WTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA* 11
WTTLASSS++NSPGLPRLNGP CSPS+S I PST+SET KLLVC PSP*TV GSFLSA
Sbjct: 477 WTTLASSSIVNSPGLPRLNGPTCSPSISLIKPSTRSETNWKLLVCFPSP*TVNGSFLSAC 298
Query: 10 AT 5
AT
Sbjct: 297 AT 292
Score = 122 bits (260), Expect = 1e-026
Identities = 57/126 (45%), Positives = 83/126 (65%)
Frame = -2 / -2
Query: 383 GGPFLVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLW 204
G LV +DT E+ DH ++LT+ +L P +LF DVRL+LVR++ V +EL V +
Sbjct: 670 GAFLLVTKDTLTEIFDHERQSLTKRDLWFPT*KLFGLCDVRLSLVRVVFCVWSELYVCIR 491
Query: 203 VDGVLDHLSQLQHAEFSRVAEVERPNVLPFHELHQPFHQI*DILKAPSLLAITIDCQRLL 24
++ +LDHLS+L+H EF+RV EVE ++ FH+ HQ F+QI + L+ P LL IT++ Q L
Sbjct: 490 INCLLDHLSELEHREFTRVTEVEWADMFSFHQSHQTFNQIRNKLETPCLLPITVNSQWLF 311
Query: 23 PQRLSN 6
P L N
Sbjct: 310 P*CLCN 293
>ref|NM_116148.1| Arabidopsis thaliana UXS2 (UDP-GLUCURONIC ACID DECARBOXYLASE 2);
catalytic/ dTDP-glucose 4,6-dehydratase AT3G62830 (UXS2)
mRNA, complete cds
Length = 1338
Score = 268 bits (580), Expect = 1e-070
Identities = 107/129 (82%), Positives = 121/129 (93%)
Frame = +3 / +1
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQALRKEPLTVYGDGKQTRSFQ+VSDLVEGLM+LMEGEH+GPFNLGNPGEF+MLELAKV
Sbjct: 922 VAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAKV 1101
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFG 365
VQ+TIDP A+IEFRPNT DDPHKRKPDI++AKELLGWEPKV LR+GLP MV DFR+R+FG
Sbjct: 1102 VQETIDPNANIEFRPNTEDDPHKRKPDITKAKELLGWEPKVSLRQGLPLMVKDFRQRVFG 1281
Query: 366 DQEGSTESA 392
DQ+ + +A
Sbjct: 1282 DQKEGSSAA 1308
Score = 203 bits (438), Expect = 4e-051
Identities = 91/122 (74%), Positives = 100/122 (81%)
Frame = -3 / -2
Query: 370 WSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVS 191
WSPK R RKS+TMRG P RR T GSQP+SS A +MSG L GSS+VFG NSM A GS+VS
Sbjct: 1286 WSPKTR*RKSLTMRGSP*RRETFGSQPKSSLAFVMSGFLL*GSSSVFGLNSMFAFGSIVS 1107
Query: 190 WTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA* 11
WTTLASSS++NSPGLPRLNGP CSPS+S I PST+SET KLLVC PSP*TV GSFLSA
Sbjct: 1106 WTTLASSSIVNSPGLPRLNGPTCSPSISLIKPSTRSETNWKLLVCFPSP*TVNGSFLSAC 927
Query: 10 AT 5
AT
Sbjct: 926 AT 921
Score = 122 bits (260), Expect = 1e-026
Identities = 57/126 (45%), Positives = 83/126 (65%)
Frame = -2 / -1
Query: 383 GGPFLVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLW 204
G LV +DT E+ DH ++LT+ +L P +LF DVRL+LVR++ V +EL V +
Sbjct: 1299 GAFLLVTKDTLTEIFDHERQSLTKRDLWFPT*KLFGLCDVRLSLVRVVFCVWSELYVCIR 1120
Query: 203 VDGVLDHLSQLQHAEFSRVAEVERPNVLPFHELHQPFHQI*DILKAPSLLAITIDCQRLL 24
++ +LDHLS+L+H EF+RV EVE ++ FH+ HQ F+QI + L+ P LL IT++ Q L
Sbjct: 1119 INCLLDHLSELEHREFTRVTEVEWADMFSFHQSHQTFNQIRNKLETPCLLPITVNSQWLF 940
Query: 23 PQRLSN 6
P L N
Sbjct: 939 P*CLCN 922
>gb|CB185735.2|CB185735 EST00661 Arabidopsis avirulent Pseudomonas syringae subtracted
library Arabidopsis thaliana cDNA clone RPM5-E9 similar
to dTDP-glucose 4-6-dehydratase homolog, mRNA sequence
Length = 672
Score = 267 bits (578), Expect = 2e-070
Identities = 107/129 (82%), Positives = 120/129 (93%)
Frame = +3 / +3
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQALRKEPLTVYGDGKQTRSFQ+VSDLVEGLM+LMEGEH+GPFNLGNPGEF MLELAKV
Sbjct: 117 VAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFMMLELAKV 296
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFG 365
VQ+TIDP A+IEFRPNT DDPHKRKPDI++AKELLGWEPKV LR+GLP MV DFR+R+FG
Sbjct: 297 VQETIDPNANIEFRPNTEDDPHKRKPDITKAKELLGWEPKVSLRQGLPLMVKDFRQRVFG 476
Query: 366 DQEGSTESA 392
DQ+ + +A
Sbjct: 477 DQKEGSSAA 503
Score = 204 bits (439), Expect = 3e-051
Identities = 91/122 (74%), Positives = 100/122 (81%)
Frame = -3 / -3
Query: 370 WSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVS 191
WSPK R RKS+TMRG P RR T GSQP+SS A +MSG L GSS+VFG NSM A GS+VS
Sbjct: 481 WSPKTR*RKSLTMRGSP*RRETFGSQPKSSLAFVMSGFLL*GSSSVFGLNSMFAFGSIVS 302
Query: 190 WTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA* 11
WTTLASSS++NSPGLPRLNGP CSPS+S I PST+SET KLLVC PSP*TV GSFLSA
Sbjct: 301 WTTLASSSIMNSPGLPRLNGPTCSPSISLIKPSTRSETNWKLLVCFPSP*TVNGSFLSAC 122
Query: 10 AT 5
AT
Sbjct: 121 AT 116
Score = 121 bits (259), Expect = 2e-026
Identities = 57/126 (45%), Positives = 83/126 (65%)
Frame = -2 / -2
Query: 383 GGPFLVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLW 204
G LV +DT E+ DH ++LT+ +L P +LF DVRL+LVR++ V +EL V +
Sbjct: 494 GAFLLVTKDTLTEIFDHERQSLTKRDLWFPT*KLFGLCDVRLSLVRVVFCVWSELYVCIR 315
Query: 203 VDGVLDHLSQLQHAEFSRVAEVERPNVLPFHELHQPFHQI*DILKAPSLLAITIDCQRLL 24
++ +LDHLS+L+H EF+RV EVE ++ FH+ HQ F+QI + L+ P LL IT++ Q L
Sbjct: 314 INCLLDHLSELEHHEFTRVTEVEWADMFSFHQSHQTFNQIRNKLETPCLLPITVNSQWLF 135
Query: 23 PQRLSN 6
P L N
Sbjct: 134 P*CLCN 117
>gb|AV782529.1|AV782529 AV782529 RAFL4 Arabidopsis thaliana cDNA clone RAFL04-18-J05 3',
mRNA sequence
Length = 689
Score = 265 bits (574), Expect = 7e-070
Identities = 106/123 (86%), Positives = 117/123 (95%)
Frame = +3 / -1
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQALRKEPLTVYGDGKQTRSFQ+VSDLVEGLM+LMEGEH+GPFNLGNPGEF+MLELAKV
Sbjct: 542 VAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAKV 363
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFG 365
VQ+TIDP A IEFRPNT DDPHKRKPDI++AKELLGWEPKV LR+GLP MV DFR+R+FG
Sbjct: 362 VQETIDPNAKIEFRPNTEDDPHKRKPDITKAKELLGWEPKVALRQGLPLMVKDFRQRVFG 183
Query: 366 DQE 374
DQ+
Sbjct: 182 DQK 174
Score = 201 bits (434), Expect = 1e-050
Identities = 90/122 (73%), Positives = 101/122 (82%)
Frame = -3 / +1
Query: 370 WSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVS 191
WSPK R RKS+T+ G P RR T GSQPRSS A +MSG LCGSS+VFG NS+ A GS+VS
Sbjct: 178 WSPKTR*RKSLTISGSPWRRATFGSQPRSSLAFVMSGFLLCGSSSVFGLNSIFAFGSIVS 357
Query: 190 WTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA* 11
TTLASSSM+NSPGLPRLNGP CSPS++ I PST+SET KLLVCLPSP*TVKGSFL+A
Sbjct: 358 *TTLASSSMVNSPGLPRLNGPTCSPSINLIRPSTRSETNWKLLVCLPSP*TVKGSFLNAW 537
Query: 10 AT 5
AT
Sbjct: 538 AT 543
Score = 105 bits (225), Expect = 1e-021
Identities = 51/122 (41%), Positives = 76/122 (62%)
Frame = -2 / +3
Query: 371 LVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLWVDGV 192
LV +DT E+ DH ++L +L P ++LF DV LV ++ V +EL + + V+ +
Sbjct: 177 LVAKDTLTEIFDHKWESLA*SHLWFPTKKLFGLCDVWFPLVWVVLCVWSELYLCVRVNCL 356
Query: 191 LDHLSQLQHAEFSRVAEVERPNVLPFHELHQPFHQI*DILKAPSLLAITIDCQRLLPQRL 12
L+HLS+L+H EF+ V +V+ ++ H+ HQ FHQI D L+ PSLL ITI+ QRL L
Sbjct: 357 LNHLSELEHGEFTGVTKVKWTDMFSLHQPHQTFHQIRDKLETPSLLTITINSQRLFS*CL 536
Query: 11 SN 6
N
Sbjct: 537 GN 542
>gb|AV521021.1|AV521021 AV521021 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZ41d10F 3', mRNA
sequence
Length = 635
Score = 265 bits (574), Expect = 7e-070
Identities = 106/123 (86%), Positives = 117/123 (95%)
Frame = +3 / -1
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQALRKEPLTVYGDGKQTRSFQ+VSDLVEGLM+LMEGEH+GPFNLGNPGEF+MLELAKV
Sbjct: 488 VAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAKV 309
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFG 365
VQ+TIDP A IEFRPNT DDPHKRKPDI++AKELLGWEPKV LR+GLP MV DFR+R+FG
Sbjct: 308 VQETIDPNAKIEFRPNTEDDPHKRKPDITKAKELLGWEPKVALRQGLPLMVKDFRQRVFG 129
Query: 366 DQE 374
DQ+
Sbjct: 128 DQK 120
Score = 201 bits (434), Expect = 1e-050
Identities = 90/122 (73%), Positives = 101/122 (82%)
Frame = -3 / +1
Query: 370 WSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVS 191
WSPK R RKS+T+ G P RR T GSQPRSS A +MSG LCGSS+VFG NS+ A GS+VS
Sbjct: 124 WSPKTR*RKSLTISGSPWRRATFGSQPRSSLAFVMSGFLLCGSSSVFGLNSIFAFGSIVS 303
Query: 190 WTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA* 11
TTLASSSM+NSPGLPRLNGP CSPS++ I PST+SET KLLVCLPSP*TVKGSFL+A
Sbjct: 304 *TTLASSSMVNSPGLPRLNGPTCSPSINLIRPSTRSETNWKLLVCLPSP*TVKGSFLNAW 483
Query: 10 AT 5
AT
Sbjct: 484 AT 489
Score = 105 bits (225), Expect = 1e-021
Identities = 51/122 (41%), Positives = 76/122 (62%)
Frame = -2 / +3
Query: 371 LVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLWVDGV 192
LV +DT E+ DH ++L +L P ++LF DV LV ++ V +EL + + V+ +
Sbjct: 123 LVAKDTLTEIFDHKWESLA*SHLWFPTKKLFGLCDVWFPLVWVVLCVWSELYLCVRVNCL 302
Query: 191 LDHLSQLQHAEFSRVAEVERPNVLPFHELHQPFHQI*DILKAPSLLAITIDCQRLLPQRL 12
L+HLS+L+H EF+ V +V+ ++ H+ HQ FHQI D L+ PSLL ITI+ QRL L
Sbjct: 303 LNHLSELEHGEFTGVTKVKWTDMFSLHQPHQTFHQIRDKLETPSLLTITINSQRLFS*CL 482
Query: 11 SN 6
N
Sbjct: 483 GN 488
>gb|AV533768.1|AV533768 AV533768 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB067e08F 3', mRNA sequence
Length = 549
Score = 265 bits (574), Expect = 7e-070
Identities = 106/123 (86%), Positives = 117/123 (95%)
Frame = +3 / -2
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQALRKEPLTVYGDGKQTRSFQ+VSDLVEGLM+LMEGEH+GPFNLGNPGEF+MLELAKV
Sbjct: 545 VAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAKV 366
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFG 365
VQ+TIDP A IEFRPNT DDPHKRKPDI++AKELLGWEPKV LR+GLP MV DFR+R+FG
Sbjct: 365 VQETIDPNAKIEFRPNTEDDPHKRKPDITKAKELLGWEPKVALRQGLPLMVKDFRQRVFG 186
Query: 366 DQE 374
DQ+
Sbjct: 185 DQK 177
Score = 201 bits (434), Expect = 1e-050
Identities = 90/122 (73%), Positives = 101/122 (82%)
Frame = -3 / +1
Query: 370 WSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVS 191
WSPK R RKS+T+ G P RR T GSQPRSS A +MSG LCGSS+VFG NS+ A GS+VS
Sbjct: 181 WSPKTR*RKSLTISGSPWRRATFGSQPRSSLAFVMSGFLLCGSSSVFGLNSIFAFGSIVS 360
Query: 190 WTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA* 11
TTLASSSM+NSPGLPRLNGP CSPS++ I PST+SET KLLVCLPSP*TVKGSFL+A
Sbjct: 361 *TTLASSSMVNSPGLPRLNGPTCSPSINLIRPSTRSETNWKLLVCLPSP*TVKGSFLNAW 540
Query: 10 AT 5
AT
Sbjct: 541 AT 546
Score = 105 bits (225), Expect = 1e-021
Identities = 51/122 (41%), Positives = 76/122 (62%)
Frame = -2 / +3
Query: 371 LVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLWVDGV 192
LV +DT E+ DH ++L +L P ++LF DV LV ++ V +EL + + V+ +
Sbjct: 180 LVAKDTLTEIFDHKWESLA*SHLWFPTKKLFGLCDVWFPLVWVVLCVWSELYLCVRVNCL 359
Query: 191 LDHLSQLQHAEFSRVAEVERPNVLPFHELHQPFHQI*DILKAPSLLAITIDCQRLLPQRL 12
L+HLS+L+H EF+ V +V+ ++ H+ HQ FHQI D L+ PSLL ITI+ QRL L
Sbjct: 360 LNHLSELEHGEFTGVTKVKWTDMFSLHQPHQTFHQIRDKLETPSLLTITINSQRLFS*CL 539
Query: 11 SN 6
N
Sbjct: 540 GN 545
>gb|AV537418.1|AV537418 AV537418 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ05f08F 3', mRNA sequence
Length = 636
Score = 265 bits (574), Expect = 7e-070
Identities = 106/123 (86%), Positives = 117/123 (95%)
Frame = +3 / -1
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQALRKEPLTVYGDGKQTRSFQ+VSDLVEGLM+LMEGEH+GPFNLGNPGEF+MLELAKV
Sbjct: 489 VAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAKV 310
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFG 365
VQ+TIDP A IEFRPNT DDPHKRKPDI++AKELLGWEPKV LR+GLP MV DFR+R+FG
Sbjct: 309 VQETIDPNAKIEFRPNTEDDPHKRKPDITKAKELLGWEPKVALRQGLPLMVKDFRQRVFG 130
Query: 366 DQE 374
DQ+
Sbjct: 129 DQK 121
Score = 201 bits (434), Expect = 1e-050
Identities = 90/122 (73%), Positives = 101/122 (82%)
Frame = -3 / +2
Query: 370 WSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVS 191
WSPK R RKS+T+ G P RR T GSQPRSS A +MSG LCGSS+VFG NS+ A GS+VS
Sbjct: 125 WSPKTR*RKSLTISGSPWRRATFGSQPRSSLAFVMSGFLLCGSSSVFGLNSIFAFGSIVS 304
Query: 190 WTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA* 11
TTLASSSM+NSPGLPRLNGP CSPS++ I PST+SET KLLVCLPSP*TVKGSFL+A
Sbjct: 305 *TTLASSSMVNSPGLPRLNGPTCSPSINLIRPSTRSETNWKLLVCLPSP*TVKGSFLNAW 484
Query: 10 AT 5
AT
Sbjct: 485 AT 490
Score = 105 bits (225), Expect = 1e-021
Identities = 51/122 (41%), Positives = 76/122 (62%)
Frame = -2 / +1
Query: 371 LVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLWVDGV 192
LV +DT E+ DH ++L +L P ++LF DV LV ++ V +EL + + V+ +
Sbjct: 124 LVAKDTLTEIFDHKWESLA*SHLWFPTKKLFGLCDVWFPLVWVVLCVWSELYLCVRVNCL 303
Query: 191 LDHLSQLQHAEFSRVAEVERPNVLPFHELHQPFHQI*DILKAPSLLAITIDCQRLLPQRL 12
L+HLS+L+H EF+ V +V+ ++ H+ HQ FHQI D L+ PSLL ITI+ QRL L
Sbjct: 304 LNHLSELEHGEFTGVTKVKWTDMFSLHQPHQTFHQIRDKLETPSLLTITINSQRLFS*CL 483
Query: 11 SN 6
N
Sbjct: 484 GN 489
>emb|AX505495.1| Sequence 190 from Patent WO0216655
Length = 1332
Score = 265 bits (574), Expect = 7e-070
Identities = 106/123 (86%), Positives = 117/123 (95%)
Frame = +3 / +1
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQALRKEPLTVYGDGKQTRSFQ+VSDLVEGLM+LMEGEH+GPFNLGNPGEF+MLELAKV
Sbjct: 928 VAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAKV 1107
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFG 365
VQ+TIDP A IEFRPNT DDPHKRKPDI++AKELLGWEPKV LR+GLP MV DFR+R+FG
Sbjct: 1108 VQETIDPNAKIEFRPNTEDDPHKRKPDITKAKELLGWEPKVALRQGLPLMVKDFRQRVFG 1287
Query: 366 DQE 374
DQ+
Sbjct: 1288 DQK 1296
Score = 201 bits (434), Expect = 1e-050
Identities = 90/122 (73%), Positives = 101/122 (82%)
Frame = -3 / -2
Query: 370 WSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVS 191
WSPK R RKS+T+ G P RR T GSQPRSS A +MSG LCGSS+VFG NS+ A GS+VS
Sbjct: 1292 WSPKTR*RKSLTISGSPWRRATFGSQPRSSLAFVMSGFLLCGSSSVFGLNSIFAFGSIVS 1113
Query: 190 WTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA* 11
TTLASSSM+NSPGLPRLNGP CSPS++ I PST+SET KLLVCLPSP*TVKGSFL+A
Sbjct: 1112 *TTLASSSMVNSPGLPRLNGPTCSPSINLIRPSTRSETNWKLLVCLPSP*TVKGSFLNAW 933
Query: 10 AT 5
AT
Sbjct: 932 AT 927
Score = 105 bits (225), Expect = 1e-021
Identities = 51/122 (41%), Positives = 76/122 (62%)
Frame = -2 / -1
Query: 371 LVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLWVDGV 192
LV +DT E+ DH ++L +L P ++LF DV LV ++ V +EL + + V+ +
Sbjct: 1293 LVAKDTLTEIFDHKWESLA*SHLWFPTKKLFGLCDVWFPLVWVVLCVWSELYLCVRVNCL 1114
Query: 191 LDHLSQLQHAEFSRVAEVERPNVLPFHELHQPFHQI*DILKAPSLLAITIDCQRLLPQRL 12
L+HLS+L+H EF+ V +V+ ++ H+ HQ FHQI D L+ PSLL ITI+ QRL L
Sbjct: 1113 LNHLSELEHGEFTGVTKVKWTDMFSLHQPHQTFHQIRDKLETPSLLTITINSQRLFS*CL 934
Query: 11 SN 6
N
Sbjct: 933 GN 928
>gb|BT022016.1| Arabidopsis thaliana At2g47650 gene, complete cds
Length = 1480
Score = 265 bits (574), Expect = 7e-070
Identities = 106/123 (86%), Positives = 117/123 (95%)
Frame = +3 / +1
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQALRKEPLTVYGDGKQTRSFQ+VSDLVEGLM+LMEGEH+GPFNLGNPGEF+MLELAKV
Sbjct: 940 VAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAKV 1119
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFG 365
VQ+TIDP A IEFRPNT DDPHKRKPDI++AKELLGWEPKV LR+GLP MV DFR+R+FG
Sbjct: 1120 VQETIDPNAKIEFRPNTEDDPHKRKPDITKAKELLGWEPKVALRQGLPLMVKDFRQRVFG 1299
Query: 366 DQE 374
DQ+
Sbjct: 1300 DQK 1308
Score = 201 bits (434), Expect = 1e-050
Identities = 90/122 (73%), Positives = 101/122 (82%)
Frame = -3 / -3
Query: 370 WSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVS 191
WSPK R RKS+T+ G P RR T GSQPRSS A +MSG LCGSS+VFG NS+ A GS+VS
Sbjct: 1304 WSPKTR*RKSLTISGSPWRRATFGSQPRSSLAFVMSGFLLCGSSSVFGLNSIFAFGSIVS 1125
Query: 190 WTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA* 11
TTLASSSM+NSPGLPRLNGP CSPS++ I PST+SET KLLVCLPSP*TVKGSFL+A
Sbjct: 1124 *TTLASSSMVNSPGLPRLNGPTCSPSINLIRPSTRSETNWKLLVCLPSP*TVKGSFLNAW 945
Query: 10 AT 5
AT
Sbjct: 944 AT 939
Score = 105 bits (225), Expect = 1e-021
Identities = 51/122 (41%), Positives = 76/122 (62%)
Frame = -2 / -2
Query: 371 LVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLWVDGV 192
LV +DT E+ DH ++L +L P ++LF DV LV ++ V +EL + + V+ +
Sbjct: 1305 LVAKDTLTEIFDHKWESLA*SHLWFPTKKLFGLCDVWFPLVWVVLCVWSELYLCVRVNCL 1126
Query: 191 LDHLSQLQHAEFSRVAEVERPNVLPFHELHQPFHQI*DILKAPSLLAITIDCQRLLPQRL 12
L+HLS+L+H EF+ V +V+ ++ H+ HQ FHQI D L+ PSLL ITI+ QRL L
Sbjct: 1125 LNHLSELEHGEFTGVTKVKWTDMFSLHQPHQTFHQIRDKLETPSLLTITINSQRLFS*CL 946
Query: 11 SN 6
N
Sbjct: 945 GN 940
>ref|NM_130333.1| Arabidopsis thaliana UXS4 (UDP-XYLOSE SYNTHASE 4); catalytic
AT2G47650 (UXS4) mRNA, complete cds
Length = 1529
Score = 265 bits (574), Expect = 7e-070
Identities = 106/123 (86%), Positives = 117/123 (95%)
Frame = +3 / +1
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQALRKEPLTVYGDGKQTRSFQ+VSDLVEGLM+LMEGEH+GPFNLGNPGEF+MLELAKV
Sbjct: 1021 VAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAKV 1200
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFG 365
VQ+TIDP A IEFRPNT DDPHKRKPDI++AKELLGWEPKV LR+GLP MV DFR+R+FG
Sbjct: 1201 VQETIDPNAKIEFRPNTEDDPHKRKPDITKAKELLGWEPKVALRQGLPLMVKDFRQRVFG 1380
Query: 366 DQE 374
DQ+
Sbjct: 1381 DQK 1389
Score = 201 bits (434), Expect = 1e-050
Identities = 90/122 (73%), Positives = 101/122 (82%)
Frame = -3 / -1
Query: 370 WSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVS 191
WSPK R RKS+T+ G P RR T GSQPRSS A +MSG LCGSS+VFG NS+ A GS+VS
Sbjct: 1385 WSPKTR*RKSLTISGSPWRRATFGSQPRSSLAFVMSGFLLCGSSSVFGLNSIFAFGSIVS 1206
Query: 190 WTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA* 11
TTLASSSM+NSPGLPRLNGP CSPS++ I PST+SET KLLVCLPSP*TVKGSFL+A
Sbjct: 1205 *TTLASSSMVNSPGLPRLNGPTCSPSINLIRPSTRSETNWKLLVCLPSP*TVKGSFLNAW 1026
Query: 10 AT 5
AT
Sbjct: 1025 AT 1020
Score = 105 bits (225), Expect = 1e-021
Identities = 51/122 (41%), Positives = 76/122 (62%)
Frame = -2 / -3
Query: 371 LVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLWVDGV 192
LV +DT E+ DH ++L +L P ++LF DV LV ++ V +EL + + V+ +
Sbjct: 1386 LVAKDTLTEIFDHKWESLA*SHLWFPTKKLFGLCDVWFPLVWVVLCVWSELYLCVRVNCL 1207
Query: 191 LDHLSQLQHAEFSRVAEVERPNVLPFHELHQPFHQI*DILKAPSLLAITIDCQRLLPQRL 12
L+HLS+L+H EF+ V +V+ ++ H+ HQ FHQI D L+ PSLL ITI+ QRL L
Sbjct: 1206 LNHLSELEHGEFTGVTKVKWTDMFSLHQPHQTFHQIRDKLETPSLLTITINSQRLFS*CL 1027
Query: 11 SN 6
N
Sbjct: 1026 GN 1021
>gb|AV541133.1|AV541133 AV541133 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ16f09F 3', mRNA sequence
Length = 594
Score = 264 bits (572), Expect = 1e-069
Identities = 106/129 (82%), Positives = 120/129 (93%)
Frame = +3 / -1
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQALRKEPLTVYGD KQTRSFQ+VSDLVEGLM+LMEGEH+GPFNLGNPGEF+MLELAKV
Sbjct: 558 VAQALRKEPLTVYGDEKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAKV 379
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFG 365
VQ+TIDP A+IEFRPNT DDPHKRKPDI++AKELLGWEPKV LR+GLP MV DFR+R+FG
Sbjct: 378 VQETIDPNANIEFRPNTEDDPHKRKPDITKAKELLGWEPKVSLRQGLPLMVKDFRQRVFG 199
Query: 366 DQEGSTESA 392
DQ+ + +A
Sbjct: 198 DQKEGSSAA 172
Score = 199 bits (430), Expect = 5e-050
Identities = 90/122 (73%), Positives = 99/122 (81%)
Frame = -3 / +2
Query: 370 WSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVS 191
WSPK R RKS+TMRG P RR T GSQP+SS A +MSG L GSS+VFG NSM A GS+VS
Sbjct: 194 WSPKTR*RKSLTMRGSP*RRETFGSQPKSSLAFVMSGFLL*GSSSVFGLNSMFAFGSIVS 373
Query: 190 WTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA* 11
WTTLASSS++NSPGLPRLNGP CSPS+S I PST+SET KLLVC SP*TV GSFLSA
Sbjct: 374 WTTLASSSIVNSPGLPRLNGPTCSPSISLIKPSTRSETNWKLLVCFSSP*TVNGSFLSAC 553
Query: 10 AT 5
AT
Sbjct: 554 AT 559
Score = 122 bits (260), Expect = 1e-026
Identities = 57/126 (45%), Positives = 83/126 (65%)
Frame = -2 / +1
Query: 383 GGPFLVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLW 204
G LV +DT E+ DH ++LT+ +L P +LF DVRL+LVR++ V +EL V +
Sbjct: 181 GAFLLVTKDTLTEIFDHERQSLTKRDLWFPT*KLFGLCDVRLSLVRVVFCVWSELYVCIR 360
Query: 203 VDGVLDHLSQLQHAEFSRVAEVERPNVLPFHELHQPFHQI*DILKAPSLLAITIDCQRLL 24
++ +LDHLS+L+H EF+RV EVE ++ FH+ HQ F+QI + L+ P LL IT++ Q L
Sbjct: 361 INCLLDHLSELEHREFTRVTEVEWADMFSFHQSHQTFNQIRNKLETPCLLLITVNSQWLF 540
Query: 23 PQRLSN 6
P L N
Sbjct: 541 P*CLCN 558
>gb|AV538824.1|AV538824 AV538824 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ121h03F 3', mRNA sequence
Length = 596
Score = 250 bits (540), Expect = 3e-065
Identities = 99/120 (82%), Positives = 112/120 (93%)
Frame = +3 / -1
Query: 33 LTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKVVQDTIDPEA 212
LTVYGDGKQTRSFQ+VSDLVEGLM+LMEGEH+GPFNLGNPGEF+MLELAKVVQ+TIDP A
Sbjct: 596 LTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAKVVQETIDPNA 417
Query: 213 HIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFGDQEGSTESA 392
+IEFRPNT DDPHKRKPDIS+AKELLGWEPKV LR+GLP MV DFR+R+FGDQ+ + +A
Sbjct: 416 NIEFRPNTEDDPHKRKPDISKAKELLGWEPKVSLRQGLPLMVKDFRQRVFGDQKEGSSAA 237
Score = 186 bits (401), Expect = 5e-046
Identities = 83/112 (74%), Positives = 91/112 (81%)
Frame = -3 / +1
Query: 370 WSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVS 191
WSPK R RKS+TMRG P RR T GSQP+SS A MSG L GSS+VFG NSM A GS+VS
Sbjct: 259 WSPKTR*RKSLTMRGSP*RRETFGSQPKSSLAFEMSGFLL*GSSSVFGLNSMFAFGSIVS 438
Query: 190 WTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TV 35
WTTLASSS++NSPGLPRLNGP CSPS+S I PST+SET KLLVC PSP*TV
Sbjct: 439 WTTLASSSIVNSPGLPRLNGPTCSPSISLIKPSTRSETNWKLLVCFPSP*TV 594
Score = 115 bits (246), Expect = 1e-024
Identities = 53/117 (45%), Positives = 79/117 (67%)
Frame = -2 / +3
Query: 383 GGPFLVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLW 204
G LV +DT E+ DH ++LT+ +L P +LF DVRL+LVR++ V +EL V +
Sbjct: 246 GAFLLVTKDTLTEIFDHERQSLTKRDLWFPT*KLFGL*DVRLSLVRVVFCVWSELYVCIR 425
Query: 203 VDGVLDHLSQLQHAEFSRVAEVERPNVLPFHELHQPFHQI*DILKAPSLLAITIDCQ 33
++ +LDHLS+L+H EF+RV EVE ++ FH+ HQ F+QI + L+ P LL IT++ Q
Sbjct: 426 INCLLDHLSELEHREFTRVTEVEWADMFSFHQSHQTFNQIRNKLETPCLLPITVNSQ 596
>gb|AV782290.1|AV782290 AV782290 RAFL4 Arabidopsis thaliana cDNA clone RAFL04-15-P08 3',
mRNA sequence
Length = 682
Score = 244 bits (528), Expect = 2e-063
Identities = 96/124 (77%), Positives = 110/124 (88%)
Frame = +3 / -2
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQ +RK P+TVYGDGKQTRSFQYVSDLVEGL+ LME +H+GPFNLGNPGEF+MLELA+V
Sbjct: 630 VAQTIRKHPMTVYGDGKQTRSFQYVSDLVEGLVALMENDHVGPFNLGNPGEFTMLELAEV 451
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFG 365
V++ IDP A IEF+PNTADDPHKRKPDIS+AKE L WEPK+ LREGLPRMV+DFR RI
Sbjct: 450 VKEVIDPSATIEFKPNTADDPHKRKPDISKAKEQLNWEPKISLREGLPRMVSDFRNRILN 271
Query: 366 DQEG 377
+ EG
Sbjct: 270 EDEG 259
Score = 163 bits (351), Expect = 4e-039
Identities = 83/124 (66%), Positives = 88/124 (70%)
Frame = -3 / +2
Query: 376 PSWSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSM 197
PS S KIRLRKS+TMRG PS R GSQ SFA LMSG L GSSAVFG NSM A GS+
Sbjct: 260 PSSSFKIRLRKSLTMRGSPSLRDIFGSQFNCSFALLMSGFLL*GSSAVFGLNSMVALGSI 439
Query: 196 VSWTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLS 17
S TT ASSS++NSPGLPRL GP S S+ SPSTKSETY*KL VC PSP*TV G
Sbjct: 440 TSLTTSASSSIVNSPGLPRLKGPT*SFSIKATSPSTKSETY*KLRVCFPSP*TVIGCLRM 619
Query: 16 A*AT 5
AT
Sbjct: 620 VWAT 631
>gb|AY065075.1| Arabidopsis thaliana dTDP-glucose 4-6-dehydratase-like protein
(F4P12.220) mRNA, complete cds
Length = 1666
Score = 244 bits (528), Expect = 2e-063
Identities = 96/124 (77%), Positives = 110/124 (88%)
Frame = +3 / +3
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQ +RK P+TVYGDGKQTRSFQYVSDLVEGL+ LME +H+GPFNLGNPGEF+MLELA+V
Sbjct: 1032 VAQTIRKHPMTVYGDGKQTRSFQYVSDLVEGLVALMENDHVGPFNLGNPGEFTMLELAEV 1211
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFG 365
V++ IDP A IEF+PNTADDPHKRKPDIS+AKE L WEPK+ LREGLPRMV+DFR RI
Sbjct: 1212 VKEVIDPSATIEFKPNTADDPHKRKPDISKAKEQLNWEPKISLREGLPRMVSDFRNRILN 1391
Query: 366 DQEG 377
+ EG
Sbjct: 1392 EDEG 1403
Score = 163 bits (351), Expect = 4e-039
Identities = 83/124 (66%), Positives = 88/124 (70%)
Frame = -3 / -1
Query: 376 PSWSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSM 197
PS S KIRLRKS+TMRG PS R GSQ SFA LMSG L GSSAVFG NSM A GS+
Sbjct: 1402 PSSSFKIRLRKSLTMRGSPSLRDIFGSQFNCSFALLMSGFLL*GSSAVFGLNSMVALGSI 1223
Query: 196 VSWTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLS 17
S TT ASSS++NSPGLPRL GP S S+ SPSTKSETY*KL VC PSP*TV G
Sbjct: 1222 TSLTTSASSSIVNSPGLPRLKGPT*SFSIKATSPSTKSETY*KLRVCFPSP*TVIGCLRM 1043
Query: 16 A*AT 5
AT
Sbjct: 1042 VWAT 1031
>gb|BT003355.1| Arabidopsis thaliana dTDP-glucose 4-6-dehydratase-like protein
(At3g53520) mRNA, complete cds
Length = 1492
Score = 244 bits (528), Expect = 2e-063
Identities = 96/124 (77%), Positives = 110/124 (88%)
Frame = +3 / +1
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQ +RK P+TVYGDGKQTRSFQYVSDLVEGL+ LME +H+GPFNLGNPGEF+MLELA+V
Sbjct: 925 VAQTIRKHPMTVYGDGKQTRSFQYVSDLVEGLVALMENDHVGPFNLGNPGEFTMLELAEV 1104
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFG 365
V++ IDP A IEF+PNTADDPHKRKPDIS+AKE L WEPK+ LREGLPRMV+DFR RI
Sbjct: 1105 VKEVIDPSATIEFKPNTADDPHKRKPDISKAKEQLNWEPKISLREGLPRMVSDFRNRILN 1284
Query: 366 DQEG 377
+ EG
Sbjct: 1285 EDEG 1296
Score = 163 bits (351), Expect = 4e-039
Identities = 83/124 (66%), Positives = 88/124 (70%)
Frame = -3 / -3
Query: 376 PSWSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSM 197
PS S KIRLRKS+TMRG PS R GSQ SFA LMSG L GSSAVFG NSM A GS+
Sbjct: 1295 PSSSFKIRLRKSLTMRGSPSLRDIFGSQFNCSFALLMSGFLL*GSSAVFGLNSMVALGSI 1116
Query: 196 VSWTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLS 17
S TT ASSS++NSPGLPRL GP S S+ SPSTKSETY*KL VC PSP*TV G
Sbjct: 1115 TSLTTSASSSIVNSPGLPRLKGPT*SFSIKATSPSTKSETY*KLRVCFPSP*TVIGCLRM 936
Query: 16 A*AT 5
AT
Sbjct: 935 VWAT 924
>ref|NM_115212.2| Arabidopsis thaliana UXS1 (UDP-GLUCURONIC ACID DECARBOXYLASE 1);
catalytic AT3G53520 (UXS1) transcript variant AT3G53520.2
mRNA, complete cds
Length = 1531
Score = 244 bits (528), Expect = 2e-063
Identities = 96/124 (77%), Positives = 110/124 (88%)
Frame = +3 / +1
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQ +RK P+TVYGDGKQTRSFQYVSDLVEGL+ LME +H+GPFNLGNPGEF+MLELA+V
Sbjct: 898 VAQTIRKHPMTVYGDGKQTRSFQYVSDLVEGLVALMENDHVGPFNLGNPGEFTMLELAEV 1077
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFG 365
V++ IDP A IEF+PNTADDPHKRKPDIS+AKE L WEPK+ LREGLPRMV+DFR RI
Sbjct: 1078 VKEVIDPSATIEFKPNTADDPHKRKPDISKAKEQLNWEPKISLREGLPRMVSDFRNRILN 1257
Query: 366 DQEG 377
+ EG
Sbjct: 1258 EDEG 1269
Score = 163 bits (351), Expect = 4e-039
Identities = 83/124 (66%), Positives = 88/124 (70%)
Frame = -3 / -3
Query: 376 PSWSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSM 197
PS S KIRLRKS+TMRG PS R GSQ SFA LMSG L GSSAVFG NSM A GS+
Sbjct: 1268 PSSSFKIRLRKSLTMRGSPSLRDIFGSQFNCSFALLMSGFLL*GSSAVFGLNSMVALGSI 1089
Query: 196 VSWTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLS 17
S TT ASSS++NSPGLPRL GP S S+ SPSTKSETY*KL VC PSP*TV G
Sbjct: 1088 TSLTTSASSSIVNSPGLPRLKGPT*SFSIKATSPSTKSETY*KLRVCFPSP*TVIGCLRM 909
Query: 16 A*AT 5
AT
Sbjct: 908 VWAT 897
>emb|BX823214.1|CNS0A7KG Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS11ZE03 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1608
Score = 241 bits (520), Expect = 2e-062
Identities = 95/124 (76%), Positives = 109/124 (87%)
Frame = +3 / +2
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQ +RK P+TVYGDGKQTRS QYVSDLVEGL+ LME +H+GPFNLGNPGEF+MLELA+V
Sbjct: 1022 VAQTIRKHPMTVYGDGKQTRSSQYVSDLVEGLVALMENDHVGPFNLGNPGEFTMLELAEV 1201
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFG 365
V++ IDP A IEF+PNTADDPHKRKPDIS+AKE L WEPK+ LREGLPRMV+DFR RI
Sbjct: 1202 VKEVIDPSATIEFKPNTADDPHKRKPDISKAKEQLNWEPKISLREGLPRMVSDFRNRILN 1381
Query: 366 DQEG 377
+ EG
Sbjct: 1382 EDEG 1393
Score = 161 bits (347), Expect = 1e-038
Identities = 82/124 (66%), Positives = 88/124 (70%)
Frame = -3 / -1
Query: 376 PSWSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSM 197
PS S KIRLRKS+TMRG PS R GSQ SFA LMSG L GSSAVFG NSM A GS+
Sbjct: 1392 PSSSFKIRLRKSLTMRGSPSLRDIFGSQFNCSFALLMSGFLL*GSSAVFGLNSMVALGSI 1213
Query: 196 VSWTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLS 17
S TT ASSS++NSPGLPRL GP S S+ SPSTKSETY*+L VC PSP*TV G
Sbjct: 1212 TSLTTSASSSIVNSPGLPRLKGPT*SFSIKATSPSTKSETY*ELRVCFPSP*TVIGCLRM 1033
Query: 16 A*AT 5
AT
Sbjct: 1032 VWAT 1021
>gb|AV541838.1|AV541838 AV541838 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ172b02F 3', mRNA sequence
Length = 570
Score = 239 bits (517), Expect = 5e-062
Identities = 94/116 (81%), Positives = 108/116 (93%)
Frame = +3 / -1
Query: 45 GDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKVVQDTIDPEAHIEF 224
GDGKQTRSFQ+VSDLVEGLM+LMEGEH+GPFNLGNPGEF+MLELAKVVQ+TIDP A+IEF
Sbjct: 570 GDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAKVVQETIDPNANIEF 391
Query: 225 RPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFGDQEGSTESA 392
RPNT DDPHKRKPDI++AKELLGWEPKV LR+GLP MV DFR+R+FGDQ+ + +A
Sbjct: 390 RPNTEDDPHKRKPDITKAKELLGWEPKVSLRQGLPLMVKDFRQRVFGDQKEGSSAA 223
Score = 180 bits (388), Expect = 3e-044
Identities = 79/108 (73%), Positives = 88/108 (81%)
Frame = -3 / +2
Query: 370 WSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVS 191
WSPK R RKS+TMRG P RR T GSQP+SS A +MSG L GSS+VFG NSM A GS+VS
Sbjct: 245 WSPKTR*RKSLTMRGSP*RRETFGSQPKSSLAFVMSGFLL*GSSSVFGLNSMFAFGSIVS 424
Query: 190 WTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPS 47
WTTLASSS++NSPGLPRLNGP CSPS+S I PST+SET KLLVC PS
Sbjct: 425 WTTLASSSIVNSPGLPRLNGPTCSPSISLIKPSTRSETNWKLLVCFPS 568
Score = 113 bits (242), Expect = 4e-024
Identities = 52/113 (46%), Positives = 76/113 (67%)
Frame = -2 / +1
Query: 383 GGPFLVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLW 204
G LV +DT E+ DH ++LT+ +L P +LF DVRL+LVR++ V +EL V +
Sbjct: 232 GAFLLVTKDTLTEIFDHERQSLTKRDLWFPT*KLFGLCDVRLSLVRVVFCVWSELYVCIR 411
Query: 203 VDGVLDHLSQLQHAEFSRVAEVERPNVLPFHELHQPFHQI*DILKAPSLLAIT 45
++ +LDHLS+L+H EF+RV EVE ++ FH+ HQ F+QI + L+ P LL IT
Sbjct: 412 INCLLDHLSELEHREFTRVTEVEWADMFSFHQSHQTFNQIRNKLETPCLLPIT 570
>emb|BX822635.1|CNS0A7MG Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB54ZH12 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1604
Score = 236 bits (510), Expect = 5e-061
Identities = 94/124 (75%), Positives = 108/124 (87%)
Frame = +3 / +2
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQ +RK P+TVYGDGKQTRSFQYVSDLVEGL+ LME +H+GPFNLGNPGEF+MLELA+V
Sbjct: 1019 VAQTIRKHPMTVYGDGKQTRSFQYVSDLVEGLVALMENDHVGPFNLGNPGEFTMLELAEV 1198
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFG 365
V++ IDP A IEF+PNTADDPHKRKPDIS+AKE L WEPK+ LRE LPRMV+ FR RI
Sbjct: 1199 VKEVIDPSATIEFKPNTADDPHKRKPDISKAKEQLNWEPKISLREVLPRMVSYFRNRILN 1378
Query: 366 DQEG 377
+ EG
Sbjct: 1379 EDEG 1390
Score = 156 bits (335), Expect = 7e-037
Identities = 81/124 (65%), Positives = 86/124 (69%)
Frame = -3 / -3
Query: 376 PSWSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSM 197
PS S KIRLRK +TMRG S R GSQ SFA LMSG L GSSAVFG NSM A GS+
Sbjct: 1389 PSSSFKIRLRK*LTMRGSTSLRDIFGSQFNCSFALLMSGFLL*GSSAVFGLNSMVALGSI 1210
Query: 196 VSWTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLS 17
S TT ASSS++NSPGLPRL GP S S+ SPSTKSETY*KL VC PSP*TV G
Sbjct: 1209 TSLTTSASSSIVNSPGLPRLKGPT*SFSIKATSPSTKSETY*KLRVCFPSP*TVIGCLRM 1030
Query: 16 A*AT 5
AT
Sbjct: 1029 VWAT 1018
>gb|CB260122.1|CB260122 94-E9601-013-003-K24-t7r MPIZ-ADIS-013 Arabidopsis thaliana cDNA
clone MPIZp770K243Q 5-PRIME, mRNA sequence
Length = 499
Score = 234 bits (505), Expect = 2e-060
Identities = 92/109 (84%), Positives = 103/109 (94%)
Frame = +3 / +3
Query: 48 DGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKVVQDTIDPEAHIEFR 227
DGKQTRSFQ+VSDLVEGLM+LMEGEH+GPFNLGNPGEF+MLELAKVVQ+TIDP A IEFR
Sbjct: 3 DGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAKVVQETIDPNAKIEFR 182
Query: 228 PNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFGDQE 374
PNT DDPHKRKPDI++AKELLGWEPKV LR+GLP MV DFR+R+FGDQ+
Sbjct: 183 PNTEDDPHKRKPDITKAKELLGWEPKVALRQGLPLMVKDFRQRVFGDQK 329
Score = 177 bits (382), Expect = 2e-043
Identities = 78/108 (72%), Positives = 88/108 (81%)
Frame = -3 / -1
Query: 370 WSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVS 191
WSPK R RKS+T+ G P RR T GSQPRSS A +MSG LCGSS+VFG NS+ A GS+VS
Sbjct: 325 WSPKTR*RKSLTISGSPWRRATFGSQPRSSLAFVMSGFLLCGSSSVFGLNSIFAFGSIVS 146
Query: 190 WTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPS 47
TTLASSSM+NSPGLPRLNGP CSPS++ I PST+SET KLLVCLPS
Sbjct: 145 *TTLASSSMVNSPGLPRLNGPTCSPSINLIRPSTRSETNWKLLVCLPS 2
>gb|BX834349.1|BX834349 BX834349 Arabidopsis thaliana Adult vegetative tissue Col-0
Arabidopsis thaliana cDNA clone GSLTLS45ZB03 3PRIM, mRNA
sequence
Length = 543
Score = 229 bits (495), Expect = 6e-059
Identities = 90/116 (77%), Positives = 103/116 (88%)
Frame = +3 / -1
Query: 30 PLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKVVQDTIDPE 209
P+TVYGDGKQTRS QYVSDLVEGL+ LME +H+GPFNLGNPGEF+MLELA+VV++ IDP
Sbjct: 543 PMTVYGDGKQTRSSQYVSDLVEGLVALMENDHVGPFNLGNPGEFTMLELAEVVKEVIDPS 364
Query: 210 AHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFGDQEG 377
A IEF+PNTADDPHKRKPDIS+AKE L WEPK+ LREGLPRMV+DFR RI + EG
Sbjct: 363 ATIEFKPNTADDPHKRKPDISKAKEQLNWEPKISLREGLPRMVSDFRNRILNEDEG 196
Score = 160 bits (343), Expect = 5e-038
Identities = 79/114 (69%), Positives = 85/114 (74%)
Frame = -3 / +2
Query: 376 PSWSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSM 197
PS S KIRLRKS+TMRG PS R GSQ SFA LMSG L GSSAVFG NSM A GS+
Sbjct: 197 PSSSFKIRLRKSLTMRGSPSLRDIFGSQFNCSFALLMSGFLL*GSSAVFGLNSMVALGSI 376
Query: 196 VSWTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TV 35
S TT ASSS++NSPGLPRL GP S S+ SPSTKSETY*+L VC PSP*TV
Sbjct: 377 TSLTTSASSSIVNSPGLPRLKGPT*SFSIKATSPSTKSETY*ELRVCFPSP*TV 538
>ref|NM_180363.1| Arabidopsis thaliana UXS1 (UDP-GLUCURONIC ACID DECARBOXYLASE 1);
catalytic AT3G53520 (UXS1) transcript variant AT3G53520.1
mRNA, complete cds
Length = 1529
Score = 182 bits (391), Expect(2) = 2e-057
Identities = 70/94 (74%), Positives = 82/94 (87%)
Frame = +3 / +2
Query: 96 GLMKLMEGEHIGPFNLGNPGEFSMLELAKVVQDTIDPEAHIEFRPNTADDPHKRKPDISR 275
GL+ LME +H+GPFNLGNPGEF+MLELA+VV++ IDP A IEF+PNTADDPHKRKPDIS+
Sbjct: 986 GLVALMENDHVGPFNLGNPGEFTMLELAEVVKEVIDPSATIEFKPNTADDPHKRKPDISK 1165
Query: 276 AKELLGWEPKVPLREGLPRMVTDFRKRIFGDQEG 377
AKE L WEPK+ LREGLPRMV+DFR RI + EG
Sbjct: 1166 AKEQLNWEPKISLREGLPRMVSDFRNRILNEDEG 1267
Score = 123 bits (263), Expect(2) = 2e-033
Identities = 62/94 (65%), Positives = 67/94 (71%)
Frame = -3 / -3
Query: 376 PSWSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSM 197
PS S KIRLRKS+TMRG PS R GSQ SFA LMSG L GSSAVFG NSM A GS+
Sbjct: 1266 PSSSFKIRLRKSLTMRGSPSLRDIFGSQFNCSFALLMSGFLL*GSSAVFGLNSMVALGSI 1087
Query: 196 VSWTTLASSSMLNSPGLPRLNGPMCSPSMSFISP 95
S TT ASSS++NSPGLPRL GP S S+ SP
Sbjct: 1086 TSLTTSASSSIVNSPGLPRLKGPT*SFSIKATSP 985
Score = 63.4 bits (132), Expect(2) = 2e-057
Identities = 25/29 (86%), Positives = 27/29 (93%)
Frame = +3 / +1
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLV 92
VAQ +RK P+TVYGDGKQTRSFQYVSDLV
Sbjct: 898 VAQTIRKHPMTVYGDGKQTRSFQYVSDLV 984
Score = 41.4 bits (84), Expect(2) = 2e-033
Identities = 20/29 (68%), Positives = 20/29 (68%)
Frame = -3 / -1
Query: 91 TKSETY*KLLVCLPSP*TVKGSFLSA*AT 5
TKSETY*KL VC PSP*TV G AT
Sbjct: 983 TKSETY*KLRVCFPSP*TVIGCLRMVWAT 897
>emb|AL162651.1|ATF26K9 Arabidopsis thaliana DNA chromosome 3, BAC clone F26K9
Length = 110257
Score = 137 bits (293), Expect(3) = 5e-057
Identities = 53/71 (74%), Positives = 63/71 (88%)
Frame = +3 / +2
Query: 180 KVVQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRI 359
KVVQ+TIDP A+IEFRPNT DDPHKRKPDI++AKELLGWEPKV LR+GLP MV DFR+R+
Sbjct: 88085 KVVQETIDPNANIEFRPNTEDDPHKRKPDITKAKELLGWEPKVSLRQGLPLMVKDFRQRV 88264
Query: 360 FGDQEGSTESA 392
FGDQ+ + +A
Sbjct: 88265 FGDQKEGSSAA 88297
Score = 77.6 bits (163), Expect(3) = 5e-057
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = +3 / +3
Query: 75 YVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
+V VEGLM+LMEGEH+GPFNLGNPGEF+MLELAKV
Sbjct: 87888 FVMQKVEGLMRLMEGEHVGPFNLGNPGEFTMLELAKV 87998
Score = 65.7 bits (137), Expect(3) = 5e-026
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = -3 / -1
Query: 184 TLASSSMLNSPGLPRLNGPMCSPSMSFISPST 89
TLASSS++NSPGLPRLNGP CSPS+S I PST
Sbjct: 87997 TLASSSIVNSPGLPRLNGPTCSPSISLIKPST 87902
Score = 64.8 bits (135), Expect(3) = 5e-057
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +3 / +1
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLV 92
+ QALRKEPLTVYGDGKQTRSFQ+VSDLV
Sbjct: 87217 IEQALRKEPLTVYGDGKQTRSFQFVSDLV 87303
Score = 61.6 bits (128), Expect(3) = 5e-026
Identities = 29/68 (42%), Positives = 44/68 (64%)
Frame = -2 / -1
Query: 383 GGPFLVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLW 204
G LV +DT E+ DH ++LT+ +L P +LF DVRL+LVR++ V +EL V +
Sbjct: 88288 GAFLLVTKDTLTEIFDHERQSLTKRDLWFPT*KLFGLCDVRLSLVRVVFCVWSELYVCIR 88109
Query: 203 VDGVLDHL 180
++ +LDHL
Sbjct: 88108 INCLLDHL 88085
Score = 47.3 bits (97), Expect(3) = 5e-026
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = -3 / -3
Query: 91 TKSETY*KLLVCLPSP*TVKGSFLSA 14
T+SET KLLVC PSP*TV GSFLSA
Sbjct: 87302 TRSETNWKLLVCFPSP*TVNGSFLSA 87225
>gb|AF387787.1| Arabidopsis thaliana UDP-glucuronic acid decarboxylase (UXS1) mRNA,
complete cds
Length = 1302
Score = 182 bits (391), Expect(2) = 6e-057
Identities = 70/94 (74%), Positives = 82/94 (87%)
Frame = +3 / +1
Query: 96 GLMKLMEGEHIGPFNLGNPGEFSMLELAKVVQDTIDPEAHIEFRPNTADDPHKRKPDISR 275
GL+ LME +H+GPFNLGNPGEF+MLELA+VV++ IDP A IEF+PNTADDPHKRKPDIS+
Sbjct: 1009 GLVALMENDHVGPFNLGNPGEFTMLELAEVVKEVIDPSATIEFKPNTADDPHKRKPDISK 1188
Query: 276 AKELLGWEPKVPLREGLPRMVTDFRKRIFGDQEG 377
AKE L WEPK+ LREGLPRMV+DFR RI + EG
Sbjct: 1189 AKEQLNWEPKISLREGLPRMVSDFRNRILNEDEG 1290
Score = 124 bits (266), Expect(2) = 6e-029
Identities = 62/98 (63%), Positives = 70/98 (71%)
Frame = -3 / -2
Query: 376 PSWSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSM 197
PS S KIRLRKS+TMRG PS R GSQ SFA LMSG L GSSAVFG NSM A GS+
Sbjct: 1289 PSSSFKIRLRKSLTMRGSPSLRDIFGSQFNCSFALLMSGFLL*GSSAVFGLNSMVALGSI 1110
Query: 196 VSWTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKS 83
S TT ASSS++NSPGLPRL GP S S+ SP +++
Sbjct: 1109 TSLTTSASSSIVNSPGLPRLKGPT*SFSIKATSPKSET 996
Score = 61.6 bits (128), Expect(2) = 6e-057
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +3 / +1
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDL 89
VAQ +RK P+TVYGDGKQTRSFQYVSDL
Sbjct: 925 VAQTIRKHPMTVYGDGKQTRSFQYVSDL 1008
Score = 24.9 bits (48), Expect(2) = 6e-029
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2 / -1
Query: 89 QI*DILKAPSLLAITIDCQRLLPQRLSN 6
Q+ +ILKA SL +ITI+ + L N
Sbjct: 1008 QVRNILKATSLFSITINSHWVFANGLGN 925
>gb|AC002535.3| Arabidopsis thaliana chromosome 2 clone T30B22 map CIC06C03, complete
sequence
Length = 98937
Score = 132 bits (283), Expect(3) = 2e-055
Identities = 51/65 (78%), Positives = 59/65 (90%)
Frame = +3 / +2
Query: 180 KVVQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRI 359
+VVQ+TIDP A IEFRPNT DDPHKRKPDI++AKELLGWEPKV LR+GLP MV DFR+R+
Sbjct: 9659 QVVQETIDPNAKIEFRPNTEDDPHKRKPDITKAKELLGWEPKVALRQGLPLMVKDFRQRV 9838
Query: 360 FGDQE 374
FGDQ+
Sbjct: 9839 FGDQK 9853
Score = 94.1 bits (199), Expect(3) = 1e-036
Identities = 42/63 (66%), Positives = 48/63 (76%)
Frame = -3 / -1
Query: 370 WSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVS 191
WSPK R RKS+T+ G P RR T GSQPRSS A +MSG LCGSS+VFG NS+ A GS+VS
Sbjct: 9849 WSPKTR*RKSLTISGSPWRRATFGSQPRSSLAFVMSGFLLCGSSSVFGLNSIFAFGSIVS 9670
Query: 190 WTT 182
TT
Sbjct: 9669 *TT 9661
Score = 75.8 bits (159), Expect(3) = 2e-055
Identities = 29/32 (90%), Positives = 32/32 (100%)
Frame = +3 / +1
Query: 90 VEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VEGLM+LMEGEH+GPFNLGNPGEF+MLELAKV
Sbjct: 9484 VEGLMRLMEGEHVGPFNLGNPGEFTMLELAKV 9579
Score = 65.7 bits (137), Expect(3) = 1e-036
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = -3 / -2
Query: 184 TLASSSMLNSPGLPRLNGPMCSPSMSFISPST 89
TLASSSM+NSPGLPRLNGP CSPS++ I PST
Sbjct: 9578 TLASSSMVNSPGLPRLNGPTCSPSINLIRPST 9483
Score = 65.7 bits (137), Expect(3) = 2e-055
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +3 / +2
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLV 92
V QALRKEPLTVYGDGKQTRSFQ+VSDLV
Sbjct: 8849 VVQALRKEPLTVYGDGKQTRSFQFVSDLV 8935
Score = 50.6 bits (104), Expect(3) = 1e-036
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = -3 / -1
Query: 91 TKSETY*KLLVCLPSP*TVKGSFLSA*AT 5
T+SET KLLVCLPSP*TVKGSFL+A T
Sbjct: 8934 TRSETNWKLLVCLPSP*TVKGSFLNACTT 8848
>gb|AC005309.3| Arabidopsis thaliana chromosome 2 clone F17A22 map CIC06C03, complete
sequence
Length = 106355
Score = 132 bits (283), Expect(3) = 2e-055
Identities = 51/65 (78%), Positives = 59/65 (90%)
Frame = +3 / -3
Query: 180 KVVQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRI 359
+VVQ+TIDP A IEFRPNT DDPHKRKPDI++AKELLGWEPKV LR+GLP MV DFR+R+
Sbjct: 6417 QVVQETIDPNAKIEFRPNTEDDPHKRKPDITKAKELLGWEPKVALRQGLPLMVKDFRQRV 6238
Query: 360 FGDQE 374
FGDQ+
Sbjct: 6237 FGDQK 6223
Score = 94.1 bits (199), Expect(3) = 1e-036
Identities = 42/63 (66%), Positives = 48/63 (76%)
Frame = -3 / +2
Query: 370 WSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVS 191
WSPK R RKS+T+ G P RR T GSQPRSS A +MSG LCGSS+VFG NS+ A GS+VS
Sbjct: 6227 WSPKTR*RKSLTISGSPWRRATFGSQPRSSLAFVMSGFLLCGSSSVFGLNSIFAFGSIVS 6406
Query: 190 WTT 182
TT
Sbjct: 6407 *TT 6415
Score = 75.8 bits (159), Expect(3) = 2e-055
Identities = 29/32 (90%), Positives = 32/32 (100%)
Frame = +3 / -2
Query: 90 VEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VEGLM+LMEGEH+GPFNLGNPGEF+MLELAKV
Sbjct: 6592 VEGLMRLMEGEHVGPFNLGNPGEFTMLELAKV 6497
Score = 65.7 bits (137), Expect(3) = 2e-055
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +3 / -3
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLV 92
V QALRKEPLTVYGDGKQTRSFQ+VSDLV
Sbjct: 7227 VVQALRKEPLTVYGDGKQTRSFQFVSDLV 7141
Score = 65.7 bits (137), Expect(3) = 1e-036
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = -3 / +3
Query: 184 TLASSSMLNSPGLPRLNGPMCSPSMSFISPST 89
TLASSSM+NSPGLPRLNGP CSPS++ I PST
Sbjct: 6498 TLASSSMVNSPGLPRLNGPTCSPSINLIRPST 6593
Score = 50.6 bits (104), Expect(3) = 1e-036
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = -3 / +2
Query: 91 TKSETY*KLLVCLPSP*TVKGSFLSA*AT 5
T+SET KLLVCLPSP*TVKGSFL+A T
Sbjct: 7142 TRSETNWKLLVCLPSP*TVKGSFLNACTT 7228
>emb|BX823176.1|CNS0A7M4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB95ZE05 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1648
Score = 188 bits (404), Expect(2) = 2e-054
Identities = 74/93 (79%), Positives = 86/93 (92%)
Frame = +3 / +2
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQ +RK P+TVYGDGKQTRSFQYVSDLVEGL+ LME +H+GPFNLGNPGEF+MLELA+V
Sbjct: 1076 VAQTIRKHPMTVYGDGKQTRSFQYVSDLVEGLVALMENDHVGPFNLGNPGEFTMLELAEV 1255
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKE 284
V++ IDP A+IEF+ NTADDPHKRKPDIS+AKE
Sbjct: 1256 VKEVIDPSANIEFQRNTADDPHKRKPDISKAKE 1354
Score = 118 bits (252), Expect(2) = 1e-030
Identities = 61/93 (65%), Positives = 65/93 (69%)
Frame = -3 / -2
Query: 283 SFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTTLASSSMLNSPGLPRLNGPMCSPSMSF 104
SFA LMSG L GSSAV NSM A GS+ S TT ASSS++NSPGLPRL GP S S+
Sbjct: 1353 SFALLMSGFLL*GSSAVLRWNSMFALGSITSLTTSASSSIVNSPGLPRLKGPT*SFSIKA 1174
Query: 103 ISPSTKSETY*KLLVCLPSP*TVKGSFLSA*AT 5
SPSTKSETY*KL VC PSP*TV G AT
Sbjct: 1173 TSPSTKSETY*KLRVCFPSP*TVIGCLRMVWAT 1075
Score = 47.3 bits (97), Expect(2) = 2e-054
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +3 / +2
Query: 297 EPKVPLREGLPRMVTDFRKRIFGDQEG 377
EPK+ LREGLPRMV+ FR RI + EG
Sbjct: 1370 EPKISLREGLPRMVSHFRNRILNEDEG 1450
Score = 37.3 bits (75), Expect(2) = 1e-030
Identities = 18/27 (66%), Positives = 19/27 (70%)
Frame = -3 / -2
Query: 376 PSWSPKIRLRKSVTMRGRPSRRGTLGS 296
PS S KIRLRK +TMRG PS R GS
Sbjct: 1449 PSSSFKIRLRK*LTMRGSPSLRDIFGS 1369
>gb|BP571979.1|BP571979 BP571979 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-78-E23 3',
mRNA sequence
Length = 444
Score = 203 bits (438), Expect = 4e-051
Identities = 79/97 (81%), Positives = 90/97 (92%)
Frame = +3 / -1
Query: 84 DLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKVVQDTIDPEAHIEFRPNTADDPHKRKP 263
DL+EGLM+ MEGEH+GPFNLGNPGEF+MLELAKVVQ+TIDP A IEFRPNT DDPHKRKP
Sbjct: 444 DLLEGLMRSMEGEHVGPFNLGNPGEFTMLELAKVVQETIDPNAKIEFRPNTEDDPHKRKP 265
Query: 264 DISRAKELLGWEPKVPLREGLPRMVTDFRKRIFGDQE 374
DI++AKELLGWEPKV LR+GLP MV DFR+R+FGDQ+
Sbjct: 264 DITKAKELLGWEPKVALRQGLPLMVKDFRQRVFGDQK 154
Score = 153 bits (328), Expect = 6e-036
Identities = 66/95 (69%), Positives = 76/95 (80%)
Frame = -3 / +2
Query: 370 WSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVS 191
WSPK R RKS+T+ G P RR T GSQPRSS A +MSG LCGSS+VFG NS+ A GS+VS
Sbjct: 158 WSPKTR*RKSLTISGSPWRRATFGSQPRSSLAFVMSGFLLCGSSSVFGLNSIFAFGSIVS 337
Query: 190 WTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTK 86
TTLASSSM+NSPGLPRLNGP CSPS+ I PS++
Sbjct: 338 *TTLASSSMVNSPGLPRLNGPTCSPSIDLIRPSSR 442
>gb|BP585895.1|BP585895 BP585895 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-04-E21 3',
mRNA sequence
Length = 450
Score = 203 bits (437), Expect = 6e-051
Identities = 79/95 (83%), Positives = 89/95 (93%)
Frame = +3 / -1
Query: 90 VEGLMKLMEGEHIGPFNLGNPGEFSMLELAKVVQDTIDPEAHIEFRPNTADDPHKRKPDI 269
VEGLM+LMEGEH+GPFNLGNPGEF+MLELAKVVQ+TIDP A IEFRPNT DDPHKRKPDI
Sbjct: 438 VEGLMRLMEGEHVGPFNLGNPGEFTMLELAKVVQETIDPNAKIEFRPNTEDDPHKRKPDI 259
Query: 270 SRAKELLGWEPKVPLREGLPRMVTDFRKRIFGDQE 374
++AKELLGWEPKV LR+GLP MV DFR+R+FGDQ+
Sbjct: 258 TKAKELLGWEPKVALRQGLPLMVKDFRQRVFGDQK 154
Score = 154 bits (331), Expect = 2e-036
Identities = 67/94 (71%), Positives = 76/94 (80%)
Frame = -3 / +2
Query: 370 WSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVS 191
WSPK R RKS+T+ G P RR T GSQPRSS A +MSG LCGSS+VFG NS+ A GS+VS
Sbjct: 158 WSPKTR*RKSLTISGSPWRRATFGSQPRSSLAFVMSGFLLCGSSSVFGLNSIFAFGSIVS 337
Query: 190 WTTLASSSMLNSPGLPRLNGPMCSPSMSFISPST 89
TTLASSSM+NSPGLPRLNGP CSPS++ I PST
Sbjct: 338 *TTLASSSMVNSPGLPRLNGPTCSPSINLIRPST 439
>gb|BP582514.1|BP582514 BP582514 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-36-J02 3',
mRNA sequence
Length = 457
Score = 199 bits (428), Expect = 1e-049
Identities = 77/93 (82%), Positives = 87/93 (93%)
Frame = +3 / -3
Query: 96 GLMKLMEGEHIGPFNLGNPGEFSMLELAKVVQDTIDPEAHIEFRPNTADDPHKRKPDISR 275
GLM+LMEGEH+GPFNLGNPGEF+MLELAKVVQ+TIDP A IEFRPNT DDPHKRKPDI++
Sbjct: 455 GLMRLMEGEHVGPFNLGNPGEFTMLELAKVVQETIDPNAKIEFRPNTEDDPHKRKPDITK 276
Query: 276 AKELLGWEPKVPLREGLPRMVTDFRKRIFGDQE 374
AKELLGWEPKV LR+GLP MV DFR+R+FGDQ+
Sbjct: 275 AKELLGWEPKVALRQGLPLMVKDFRQRVFGDQK 177
Score = 150 bits (322), Expect = 4e-035
Identities = 65/92 (70%), Positives = 74/92 (80%)
Frame = -3 / +1
Query: 370 WSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVS 191
WSPK R RKS+T+ G P RR T GSQPRSS A +MSG LCGSS+VFG NS+ A GS+VS
Sbjct: 181 WSPKTR*RKSLTISGSPWRRATFGSQPRSSLAFVMSGFLLCGSSSVFGLNSIFAFGSIVS 360
Query: 190 WTTLASSSMLNSPGLPRLNGPMCSPSMSFISP 95
TTLASSSM+NSPGLPRLNGP CSPS++ I P
Sbjct: 361 *TTLASSSMVNSPGLPRLNGPTCSPSINLIRP 456
>gb|N38350.1|N38350 19577 Lambda-PRL2 Arabidopsis thaliana cDNA clone 214G12T7 3', mRNA
sequence
Length = 500
Score = 194 bits (419), Expect = 2e-048
Identities = 75/96 (78%), Positives = 88/96 (91%)
Frame = +3 / +2
Query: 105 KLMEGEHIGPFNLGNPGEFSMLELAKVVQDTIDPEAHIEFRPNTADDPHKRKPDISRAKE 284
+LMEGEH+GPFNLGNPGEF+MLELAKVVQ+TIDP A+IEFRPNT DDPHKRKPDI++AKE
Sbjct: 2 RLMEGEHVGPFNLGNPGEFTMLELAKVVQETIDPNANIEFRPNTEDDPHKRKPDITKAKE 181
Query: 285 LLGWEPKVPLREGLPRMVTDFRKRIFGDQEGSTESA 392
LLGWEPKV LR+GLP MV DFR+R+FGDQ+ + +A
Sbjct: 182 LLGWEPKVSLRQGLPLMVKDFRQRVFGDQKEGSSAA 289
Score = 149 bits (321), Expect = 6e-035
Identities = 65/88 (73%), Positives = 73/88 (82%)
Frame = -3 / -3
Query: 370 WSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVS 191
WSPK R RKS+TMRG P RR T GSQP+SS A +MSG L GSS+VFG NSM A GS+VS
Sbjct: 267 WSPKTR*RKSLTMRGSP*RRETFGSQPKSSLAFVMSGFLL*GSSSVFGLNSMFAFGSIVS 88
Query: 190 WTTLASSSMLNSPGLPRLNGPMCSPSMS 107
WTTLASSS++NSPGLPRLNGP CSPS+S
Sbjct: 87 WTTLASSSIVNSPGLPRLNGPTCSPSIS 4
>emb|AL132966.1|ATF4P12 Arabidopsis thaliana DNA chromosome 3, BAC clone F4P12
Length = 144628
Score = 124 bits (266), Expect(3) = 2e-048
Identities = 48/66 (72%), Positives = 56/66 (84%)
Frame = +3 / +2
Query: 180 KVVQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRI 359
+VV++ IDP A IEF+PNTADDPHKRKPDIS+AKE L WEPK+ LREGLPRMV+DFR RI
Sbjct: 84518 QVVKEVIDPSATIEFKPNTADDPHKRKPDISKAKEQLNWEPKISLREGLPRMVSDFRNRI 84697
Query: 360 FGDQEG 377
+ EG
Sbjct: 84698 LNEDEG 84715
Score = 90.0 bits (190), Expect(3) = 7e-027
Identities = 46/70 (65%), Positives = 48/70 (68%)
Frame = -3 / -2
Query: 376 PSWSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSM 197
PS S KIRLRKS+TMRG PS R GSQ SFA LMSG L GSSAVFG NSM A GS+
Sbjct: 84714 PSSSFKIRLRKSLTMRGSPSLRDIFGSQFNCSFALLMSGFLL*GSSAVFGLNSMVALGSI 84535
Query: 196 VSWTTLASSS 167
S TT SS
Sbjct: 84534 TSLTTCTQSS 84505
Score = 66.6 bits (139), Expect(3) = 2e-048
Identities = 25/32 (78%), Positives = 30/32 (93%)
Frame = +3 / +3
Query: 90 VEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VEGL+ LME +H+GPFNLGNPGEF+MLELA+V
Sbjct: 84132 VEGLVALMENDHVGPFNLGNPGEFTMLELAEV 84227
Score = 59.7 bits (124), Expect(3) = 2e-048
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = +3 / +3
Query: 12 QALRKEPLTVYGDGKQTRSFQYVSDLV 92
Q +RK P+TVYGDGKQTRSFQYVSDLV
Sbjct: 83949 QTIRKHPMTVYGDGKQTRSFQYVSDLV 84029
Score = 47.3 bits (97), Expect(3) = 7e-027
Identities = 22/37 (59%), Positives = 26/37 (70%)
Frame = -3 / -1
Query: 184 TLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY 74
T ASSS++NSPGLPRL GP S S+ SPST E +
Sbjct: 84226 TSASSSIVNSPGLPRLKGPT*SFSIKATSPST*KEKF 84116
Score = 40.9 bits (83), Expect(3) = 7e-027
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = -3 / -1
Query: 91 TKSETY*KLLVCLPSP*TVKG 29
TKSETY*KL VC PSP*TV G
Sbjct: 84028 TKSETY*KLRVCFPSP*TVIG 83966
>gb|AV553003.1|AV553003 AV553003 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ51d02R 5', mRNA sequence
Length = 542
Score = 192 bits (413), Expect = 1e-047
Identities = 77/85 (90%), Positives = 83/85 (97%)
Frame = +3 / +3
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQALRKEPLTVYGDGKQTRSFQ+VSDLVEGLM+LMEGEH+GPFNLGNPGEF+MLELAKV
Sbjct: 288 VAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAKV 467
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRK 260
VQ+TIDP A+IEFRPNT DDPHKRK
Sbjct: 468 VQETIDPNANIEFRPNTEDDPHKRK 542
Score = 146 bits (313), Expect = 7e-034
Identities = 64/81 (79%), Positives = 70/81 (86%)
Frame = -3 / -2
Query: 247 GSSAVFGRNSMCASGSMVSWTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*K 68
GSS+VFG NSM A GS+VSWTTLASSS++NSPGLPRLNGP CSPS+S I PST+SET K
Sbjct: 529 GSSSVFGLNSMFAFGSIVSWTTLASSSIVNSPGLPRLNGPTCSPSISLIKPSTRSETNWK 350
Query: 67 LLVCLPSP*TVKGSFLSA*AT 5
LLVC PSP*TV GSFLSA AT
Sbjct: 349 LLVCFPSP*TVNGSFLSACAT 287
>emb|BX824800.1|CNS0A7L3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH73ZC05 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1687
Score = 190 bits (409), Expect = 4e-047
Identities = 78/124 (62%), Positives = 92/124 (74%)
Frame = +3 / +2
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQ +RK P+T+Y DGK TR QYVS LVE L+ LME +H+GPFNL NPG F+ML LA+V
Sbjct: 1094 VAQTIRKHPITLYVDGKHTRRSQYVSHLVEALVALMENDHVGPFNLRNPGAFTMLALAEV 1273
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFG 365
V++ ID A I F+PNTA DPHKRKP I AK L WEPK+ LRE LPRMV+ FR RI
Sbjct: 1274 VKEVIDQSATIAFKPNTAHDPHKRKPHIRNAKAQLHWEPKISLREALPRMVSHFRNRILN 1453
Query: 366 DQEG 377
+ EG
Sbjct: 1454 EDEG 1465
Score = 117 bits (251), Expect = 3e-025
Identities = 66/124 (53%), Positives = 76/124 (61%)
Frame = -3 / -2
Query: 376 PSWSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSM 197
PS S KIRLRK +TMRG S R GSQ +FA M G L GS AVFG N+M A S+
Sbjct: 1464 PSSSFKIRLRK*LTMRGSASLRDIFGSQCNCAFALRMCGFLL*GSCAVFGLNAMVALWSI 1285
Query: 196 VSWTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLS 17
S TT AS+S++N+PGL RL GP S S+ S STK ETY*+ VC PS * V G
Sbjct: 1284 TSLTTSASASIVNAPGLRRLKGPT*SFSIKATSASTK*ETY*ERRVCFPST*RVIGCLRM 1105
Query: 16 A*AT 5
AT
Sbjct: 1104 VWAT 1093
>gb|AQ969939.1|AQ969939 LERJR50TF LERG Arabidopsis thaliana genomic clone LERJR50, DNA
sequence
Length = 630
Score = 132 bits (283), Expect(2) = 2e-046
Identities = 51/65 (78%), Positives = 59/65 (90%)
Frame = +3 / +1
Query: 180 KVVQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRI 359
+VVQ+TIDP A IEFRPNT DDPHKRKPDI++AKELLGWEPKV LR+GLP MV DFR+R+
Sbjct: 382 QVVQETIDPNAKIEFRPNTEDDPHKRKPDITKAKELLGWEPKVALRQGLPLMVKDFRQRV 561
Query: 360 FGDQE 374
FGDQ+
Sbjct: 562 FGDQK 576
Score = 94.1 bits (199), Expect(2) = 6e-032
Identities = 42/63 (66%), Positives = 48/63 (76%)
Frame = -3 / -2
Query: 370 WSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVS 191
WSPK R RKS+T+ G P RR T GSQPRSS A +MSG LCGSS+VFG NS+ A GS+VS
Sbjct: 572 WSPKTR*RKSLTISGSPWRRATFGSQPRSSLAFVMSGFLLCGSSSVFGLNSIFAFGSIVS 393
Query: 190 WTT 182
TT
Sbjct: 392 *TT 384
Score = 75.8 bits (159), Expect(2) = 2e-046
Identities = 29/32 (90%), Positives = 32/32 (100%)
Frame = +3 / +3
Query: 90 VEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VEGLM+LMEGEH+GPFNLGNPGEF+MLELAKV
Sbjct: 207 VEGLMRLMEGEHVGPFNLGNPGEFTMLELAKV 302
Score = 65.7 bits (137), Expect(2) = 6e-032
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = -3 / -3
Query: 184 TLASSSMLNSPGLPRLNGPMCSPSMSFISPST 89
TLASSSM+NSPGLPRLNGP CSPS++ I PST
Sbjct: 301 TLASSSMVNSPGLPRLNGPTCSPSINLIRPST 206
>gb|AY099703.1| Arabidopsis thaliana putative nucleotide-sugar dehydratase
(At2g28760) mRNA, complete cds
Length = 1393
Score = 187 bits (402), Expect = 4e-046
Identities = 77/118 (65%), Positives = 93/118 (78%)
Frame = +3 / +1
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
+AQALR E LTV G QTRSF YVSD+VEGLM+LMEG+ GP N+GNPGEF+M+ELA+
Sbjct: 745 IAQALRGEALTVQKPGTQTRSFCYVSDMVEGLMRLMEGDQTGPINIGNPGEFTMVELAET 924
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRI 359
V++ I P+ I+ NT DDP +RKPDIS+AKE+LGWEPKV LREGLP M DFR R+
Sbjct: 925 VKELIKPDVEIKMVENTPDDPRQRKPDISKAKEVLGWEPKVKLREGLPLMEEDFRLRL 1098
Score = 122 bits (262), Expect = 8e-027
Identities = 63/114 (55%), Positives = 75/114 (65%)
Frame = -3 / -3
Query: 349 RKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTTLASS 170
RKS ++RG PSR T GSQPR+S A LMSG GSS VF + SG + S T ASS
Sbjct: 1088 RKSSSIRGSPSRSFTFGSQPRTSLALLMSGFLCLGSSGVFSTIFISTSGLISSLTVSASS 909
Query: 169 SMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA*A 8
+++NSPGLP GP+ SPS+ I PST SET KL VC+P *TV+ S L A*A
Sbjct: 908 TIVNSPGLPMFIGPVWSPSIKRIRPSTMSET*QKLRVCVPGF*TVRASPLRA*A 747
>gb|AY128899.1| Arabidopsis thaliana putative nucleotide-sugar dehydratase
(At2g28760) mRNA, complete cds
Length = 1234
Score = 187 bits (402), Expect = 4e-046
Identities = 77/118 (65%), Positives = 93/118 (78%)
Frame = +3 / +1
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
+AQALR E LTV G QTRSF YVSD+VEGLM+LMEG+ GP N+GNPGEF+M+ELA+
Sbjct: 661 IAQALRGEALTVQKPGTQTRSFCYVSDMVEGLMRLMEGDQTGPINIGNPGEFTMVELAET 840
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRI 359
V++ I P+ I+ NT DDP +RKPDIS+AKE+LGWEPKV LREGLP M DFR R+
Sbjct: 841 VKELIKPDVEIKMVENTPDDPRQRKPDISKAKEVLGWEPKVKLREGLPLMEEDFRLRL 1014
Score = 122 bits (262), Expect = 8e-027
Identities = 63/114 (55%), Positives = 75/114 (65%)
Frame = -3 / -3
Query: 349 RKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTTLASS 170
RKS ++RG PSR T GSQPR+S A LMSG GSS VF + SG + S T ASS
Sbjct: 1004 RKSSSIRGSPSRSFTFGSQPRTSLALLMSGFLCLGSSGVFSTIFISTSGLISSLTVSASS 825
Query: 169 SMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA*A 8
+++NSPGLP GP+ SPS+ I PST SET KL VC+P *TV+ S L A*A
Sbjct: 824 TIVNSPGLPMFIGPVWSPSIKRIRPSTMSET*QKLRVCVPGF*TVRASPLRA*A 663
>emb|AX506427.1| Sequence 1122 from Patent WO0216655
Length = 1032
Score = 187 bits (402), Expect = 4e-046
Identities = 77/118 (65%), Positives = 93/118 (78%)
Frame = +3 / +1
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
+AQALR E LTV G QTRSF YVSD+VEGLM+LMEG+ GP N+GNPGEF+M+ELA+
Sbjct: 661 IAQALRGEALTVQKPGTQTRSFCYVSDMVEGLMRLMEGDQTGPINIGNPGEFTMVELAET 840
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRI 359
V++ I P+ I+ NT DDP +RKPDIS+AKE+LGWEPKV LREGLP M DFR R+
Sbjct: 841 VKELIKPDVEIKMVENTPDDPRQRKPDISKAKEVLGWEPKVKLREGLPLMEEDFRLRL 1014
Score = 122 bits (262), Expect = 8e-027
Identities = 63/114 (55%), Positives = 75/114 (65%)
Frame = -3 / -2
Query: 349 RKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTTLASS 170
RKS ++RG PSR T GSQPR+S A LMSG GSS VF + SG + S T ASS
Sbjct: 1004 RKSSSIRGSPSRSFTFGSQPRTSLALLMSGFLCLGSSGVFSTIFISTSGLISSLTVSASS 825
Query: 169 SMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA*A 8
+++NSPGLP GP+ SPS+ I PST SET KL VC+P *TV+ S L A*A
Sbjct: 824 TIVNSPGLPMFIGPVWSPSIKRIRPSTMSET*QKLRVCVPGF*TVRASPLRA*A 663
>ref|NM_128436.3| Arabidopsis thaliana NAD binding / catalytic AT2G28760 transcript
variant AT2G28760.1 mRNA, complete cds
Length = 1394
Score = 187 bits (402), Expect = 4e-046
Identities = 77/118 (65%), Positives = 93/118 (78%)
Frame = +3 / +1
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
+AQALR E LTV G QTRSF YVSD+VEGLM+LMEG+ GP N+GNPGEF+M+ELA+
Sbjct: 745 IAQALRGEALTVQKPGTQTRSFCYVSDMVEGLMRLMEGDQTGPINIGNPGEFTMVELAET 924
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRI 359
V++ I P+ I+ NT DDP +RKPDIS+AKE+LGWEPKV LREGLP M DFR R+
Sbjct: 925 VKELIKPDVEIKMVENTPDDPRQRKPDISKAKEVLGWEPKVKLREGLPLMEEDFRLRL 1098
Score = 122 bits (262), Expect = 8e-027
Identities = 63/114 (55%), Positives = 75/114 (65%)
Frame = -3 / -1
Query: 349 RKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTTLASS 170
RKS ++RG PSR T GSQPR+S A LMSG GSS VF + SG + S T ASS
Sbjct: 1088 RKSSSIRGSPSRSFTFGSQPRTSLALLMSGFLCLGSSGVFSTIFISTSGLISSLTVSASS 909
Query: 169 SMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA*A 8
+++NSPGLP GP+ SPS+ I PST SET KL VC+P *TV+ S L A*A
Sbjct: 908 TIVNSPGLPMFIGPVWSPSIKRIRPSTMSET*QKLRVCVPGF*TVRASPLRA*A 747
>ref|NM_201826.1| Arabidopsis thaliana NAD binding / catalytic AT2G28760 transcript
variant AT2G28760.2 mRNA, complete cds
Length = 1389
Score = 187 bits (402), Expect = 4e-046
Identities = 77/118 (65%), Positives = 93/118 (78%)
Frame = +3 / +2
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
+AQALR E LTV G QTRSF YVSD+VEGLM+LMEG+ GP N+GNPGEF+M+ELA+
Sbjct: 740 IAQALRGEALTVQKPGTQTRSFCYVSDMVEGLMRLMEGDQTGPINIGNPGEFTMVELAET 919
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRI 359
V++ I P+ I+ NT DDP +RKPDIS+AKE+LGWEPKV LREGLP M DFR R+
Sbjct: 920 VKELIKPDVEIKMVENTPDDPRQRKPDISKAKEVLGWEPKVKLREGLPLMEEDFRLRL 1093
Score = 122 bits (262), Expect = 8e-027
Identities = 63/114 (55%), Positives = 75/114 (65%)
Frame = -3 / -1
Query: 349 RKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTTLASS 170
RKS ++RG PSR T GSQPR+S A LMSG GSS VF + SG + S T ASS
Sbjct: 1083 RKSSSIRGSPSRSFTFGSQPRTSLALLMSGFLCLGSSGVFSTIFISTSGLISSLTVSASS 904
Query: 169 SMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA*A 8
+++NSPGLP GP+ SPS+ I PST SET KL VC+P *TV+ S L A*A
Sbjct: 903 TIVNSPGLPMFIGPVWSPSIKRIRPSTMSET*QKLRVCVPGF*TVRASPLRA*A 742
>gb|AV439961.1|AV439961 AV439961 Arabidopsis thaliana above-ground organ two to six-week
old Arabidopsis thaliana cDNA clone APD31d11_f 3', mRNA
sequence
Length = 535
Score = 183 bits (394), Expect = 5e-045
Identities = 72/101 (71%), Positives = 86/101 (85%)
Frame = +3 / -3
Query: 75 YVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKVVQDTIDPEAHIEFRPNTADDPHK 254
YVSDL+ L+ LME +H+GPFNLGNPGEF+MLELA+VV++ IDP A IEF+P+TADDPHK
Sbjct: 533 YVSDLL*ELVALMENDHVGPFNLGNPGEFTMLELAEVVKEVIDPSATIEFKPSTADDPHK 354
Query: 255 RKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFGDQEG 377
RKPDIS+AK L WEPK+ LREGLPRMV+DFR RI + EG
Sbjct: 353 RKPDISKAKAQLNWEPKISLREGLPRMVSDFRNRILNEDEG 231
Score = 127 bits (271), Expect = 4e-028
Identities = 64/101 (63%), Positives = 71/101 (70%)
Frame = -3 / +1
Query: 376 PSWSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSM 197
PS S KIRLRKS+TMRG PS R GSQ +FA LMSG L GSSAV G NSM A GS+
Sbjct: 232 PSSSFKIRLRKSLTMRGSPSLRDIFGSQFNCAFALLMSGFLL*GSSAVLGLNSMVALGSI 411
Query: 196 VSWTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY 74
S TT ASSS++NSPGLPRL GP S S+ S +KSETY
Sbjct: 412 TSLTTSASSSIVNSPGLPRLKGPT*SFSIKATSSYSKSETY 534
>gb|CK121683.1|CK121683 202b24.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011B24202
5-PRIME, mRNA sequence
Length = 762
Score = 183 bits (394), Expect = 5e-045
Identities = 75/118 (63%), Positives = 93/118 (78%)
Frame = +3 / +1
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
+AQALR E LTV G QTRSF YVSD+V+GLM+LMEG+ GP N+GNPGEF+M+ELA+
Sbjct: 337 IAQALRGEALTVQKPGTQTRSFCYVSDMVDGLMRLMEGDDTGPINIGNPGEFTMVELAET 516
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRI 359
V++ I+P I+ NT DDP +RKPDI++AKE+LGWEPKV LREGLP M DFR R+
Sbjct: 517 VKELINPSIEIKMVENTPDDPRQRKPDITKAKEVLGWEPKVKLREGLPLMEEDFRLRL 690
Score = 112 bits (239), Expect = 1e-023
Identities = 57/111 (51%), Positives = 71/111 (63%)
Frame = -3 / -2
Query: 346 KSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTTLASSS 167
KS ++ GRPSR T GS P +S A +MSG GSS VF + G + S+T A+S+
Sbjct: 677 KSSSISGRPSRSFTFGSHPNTSLAFVMSGFLCLGSSGVFSTIFISMLGLISSFTVSANST 498
Query: 166 MLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA 14
++NSPGLP L GP+ SPSM ISPST S+T KL VC+P *TV S SA
Sbjct: 497 IVNSPGLPMLMGPVSSPSMRRISPSTMSDT*QKLRVCVPGF*TVNASPRSA 345
>gb|AY072098.1| Arabidopsis thaliana putative dTDP-glucose 4-6-dehydratase
(At3g46440) mRNA, complete cds
Length = 1356
Score = 183 bits (394), Expect = 5e-045
Identities = 75/118 (63%), Positives = 93/118 (78%)
Frame = +3 / +3
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
+AQALR E LTV G QTRSF YVSD+V+GLM+LMEG+ GP N+GNPGEF+M+ELA+
Sbjct: 780 IAQALRGEALTVQKPGTQTRSFCYVSDMVDGLMRLMEGDDTGPINIGNPGEFTMVELAET 959
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRI 359
V++ I+P I+ NT DDP +RKPDI++AKE+LGWEPKV LREGLP M DFR R+
Sbjct: 960 VKELINPSIEIKMVENTPDDPRQRKPDITKAKEVLGWEPKVKLREGLPLMEEDFRLRL 1133
Score = 112 bits (239), Expect = 1e-023
Identities = 57/111 (51%), Positives = 71/111 (63%)
Frame = -3 / -3
Query: 346 KSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTTLASSS 167
KS ++ GRPSR T GS P +S A +MSG GSS VF + G + S+T A+S+
Sbjct: 1120 KSSSISGRPSRSFTFGSHPNTSLAFVMSGFLCLGSSGVFSTIFISMLGLISSFTVSANST 941
Query: 166 MLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA 14
++NSPGLP L GP+ SPSM ISPST S+T KL VC+P *TV S SA
Sbjct: 940 IVNSPGLPMLMGPVSSPSMRRISPSTMSDT*QKLRVCVPGF*TVNASPRSA 788
>gb|AY096586.1| Arabidopsis thaliana putative dTDP-glucose 4-6-dehydratases
(At3g46440) mRNA, complete cds
Length = 1057
Score = 183 bits (394), Expect = 5e-045
Identities = 75/118 (63%), Positives = 93/118 (78%)
Frame = +3 / +1
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
+AQALR E LTV G QTRSF YVSD+V+GLM+LMEG+ GP N+GNPGEF+M+ELA+
Sbjct: 655 IAQALRGEALTVQKPGTQTRSFCYVSDMVDGLMRLMEGDDTGPINIGNPGEFTMVELAET 834
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRI 359
V++ I+P I+ NT DDP +RKPDI++AKE+LGWEPKV LREGLP M DFR R+
Sbjct: 835 VKELINPSIEIKMVENTPDDPRQRKPDITKAKEVLGWEPKVKLREGLPLMEEDFRLRL 1008
Score = 112 bits (239), Expect = 1e-023
Identities = 57/111 (51%), Positives = 71/111 (63%)
Frame = -3 / -3
Query: 346 KSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTTLASSS 167
KS ++ GRPSR T GS P +S A +MSG GSS VF + G + S+T A+S+
Sbjct: 995 KSSSISGRPSRSFTFGSHPNTSLAFVMSGFLCLGSSGVFSTIFISMLGLISSFTVSANST 816
Query: 166 MLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA 14
++NSPGLP L GP+ SPSM ISPST S+T KL VC+P *TV S SA
Sbjct: 815 IVNSPGLPMLMGPVSSPSMRRISPSTMSDT*QKLRVCVPGF*TVNASPRSA 663
>gb|AY087118.1| Arabidopsis thaliana clone 31901 mRNA, complete sequence
Length = 1281
Score = 183 bits (394), Expect = 5e-045
Identities = 75/118 (63%), Positives = 93/118 (78%)
Frame = +3 / +2
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
+AQALR E LTV G QTRSF YVSD+V+GLM+LMEG+ GP N+GNPGEF+M+ELA+
Sbjct: 716 IAQALRGEALTVQKPGTQTRSFCYVSDMVDGLMRLMEGDDTGPINIGNPGEFTMVELAET 895
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRI 359
V++ I+P I+ NT DDP +RKPDI++AKE+LGWEPKV LREGLP M DFR R+
Sbjct: 896 VKELINPSIEIKMVENTPDDPRQRKPDITKAKEVLGWEPKVKLREGLPLMEEDFRLRL 1069
Score = 118 bits (252), Expect = 2e-025
Identities = 60/113 (53%), Positives = 75/113 (66%)
Frame = -3 / -1
Query: 346 KSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTTLASSS 167
KS ++RGRPSR T GS P++S A +MSG GSS VF + G + S+T A+S+
Sbjct: 1056 KSSSIRGRPSRSFTFGSHPKTSLAFVMSGFLCLGSSGVFSTIFISMLGLISSFTVSANST 877
Query: 166 MLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA*A 8
++NSPGLP L GP+ SPSM ISPST S+T KL VC+P *TV S SA*A
Sbjct: 876 IVNSPGLPMLMGPVSSPSMRRISPSTMSDT*QKLRVCVPGF*TVNASPRSA*A 718
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,131,176,250
Number of Sequences: 1013581
Number of extensions: 14298279
Number of successful extensions: 125212
Number of sequences better than 1.0e-020: 137
length of database: 302,980,290
effective HSP length: 55
effective length of database: 247,233,335
effective search space used: 39804566935
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)