TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3198841.2.3
(792 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|NM_122467.2| Arabidopsis thaliana protein binding / ubi... 309 7e-083
gb|AY070720.1| Arabidopsis thaliana AT5g25560/T14C9_100 mRN... 295 1e-078
gb|AY052362.1| Arabidopsis thaliana AT5g22920/MRN17_15 mRNA... 290 3e-077
gb|BT002635.1| Arabidopsis thaliana At5g22920/MRN17_15 gene... 290 3e-077
gb|AY088138.1| Arabidopsis thaliana clone 41666 mRNA, compl... 290 3e-077
gb|DQ059131.1| Arabidopsis thaliana RING finger family prot... 290 3e-077
ref|NM_122198.2| Arabidopsis thaliana ubiquitin-protein lig... 290 3e-077
emb|BX831389.1|CNS0A1NP Arabidopsis thaliana Full-length cD... 281 1e-074
ref|NM_121870.3| Arabidopsis thaliana protein binding / ubi... 171 5e-061
gb|AY064060.1| Arabidopsis thaliana unknown protein (At5g18... 171 5e-061
emb|BX829794.1|CNS0A03H Arabidopsis thaliana Full-length cD... 171 5e-061
gb|AY096370.1| Arabidopsis thaliana unknown protein (At5g18... 171 5e-061
emb|CQ803772.1| Sequence 183 from Patent WO2004035798 171 5e-061
ref|NM_116162.4| Arabidopsis thaliana protein binding / ubi... 166 1e-057
emb|BX825642.1|CNS0A514 Arabidopsis thaliana Full-length cD... 166 1e-057
gb|BT006418.1| Arabidopsis thaliana At3g62970 gene, complet... 166 1e-057
gb|CA781795.1|CA781795 050D05AF Infected Arabidopsis Leaf A... 171 1e-057
gb|BP562733.1|BP562733 BP562733 RAFL14 Arabidopsis thaliana... 166 1e-057
emb|BX830637.1|CNS0A048 Arabidopsis thaliana Full-length cD... 160 1e-057
gb|AV560651.1|AV560651 AV560651 Arabidopsis thaliana green ... 220 6e-056
emb|BX841616.1|CNS09YKN Arabidopsis thaliana Full-length cD... 171 2e-055
gb|AV826141.1|AV826141 AV826141 RAFL8 Arabidopsis thaliana ... 202 4e-055
gb|CB259861.1|CB259861 18-E011177-013-009-C06-T7R MPIZ-ADIS... 184 2e-048
gb|AC006601.1|AC006601 Arabidopsis thaliana chromosome V ma... 75 5e-045
gb|BP823729.1|BP823729 BP823729 RAFL19 Arabidopsis thaliana... 111 3e-041
gb|BP798029.1|BP798029 BP798029 RAFL14 Arabidopsis thaliana... 111 3e-041
dbj|AB005243.1| Arabidopsis thaliana genomic DNA, chromosom... 79 1e-039
gb|Z37684.1|Z37684 ATTS4149 Versailles-VB Arabidopsis thali... 100 2e-038
gb|BP833602.1|BP833602 BP833602 RAFL19 Arabidopsis thaliana... 75 1e-032
gb|AC051627.4|AC051627 Genomic Sequence For Arabidopsis tha... 76 1e-031
gb|BP824281.1|BP824281 BP824281 RAFL19 Arabidopsis thaliana... 86 4e-031
gb|BP813040.1|BP813040 BP813040 RAFL19 Arabidopsis thaliana... 95 9e-031
gb|BP853639.1|BP853639 BP853639 RAFL21 Arabidopsis thaliana... 131 3e-029
gb|BP866007.1|BP866007 BP866007 RAFL21 Arabidopsis thaliana... 131 3e-029
gb|BP861307.1|BP861307 BP861307 RAFL21 Arabidopsis thaliana... 128 2e-028
gb|BP821006.1|BP821006 BP821006 RAFL19 Arabidopsis thaliana... 86 5e-028
emb|AL163816.1|ATT20O10 Arabidopsis thaliana DNA chromosome... 69 3e-027
gb|BP868217.1|BP868217 BP868217 RAFL21 Arabidopsis thaliana... 122 1e-026
gb|T04243.1|T04243 290 Lambda-PRL2 Arabidopsis thaliana cDN... 120 7e-026
gb|BP849322.1|BP849322 BP849322 RAFL21 Arabidopsis thaliana... 119 9e-026
gb|BP852216.1|BP852216 BP852216 RAFL21 Arabidopsis thaliana... 119 1e-025
gb|BP841725.1|BP841725 BP841725 RAFL21 Arabidopsis thaliana... 117 3e-025
gb|AV550477.1|AV550477 AV550477 Arabidopsis thaliana roots ... 80 5e-025
gb|BP861089.1|BP861089 BP861089 RAFL21 Arabidopsis thaliana... 116 6e-025
gb|BP865031.1|BP865031 BP865031 RAFL21 Arabidopsis thaliana... 116 6e-025
gb|T43488.1|T43488 6751 Lambda-PRL2 Arabidopsis thaliana cD... 113 6e-024
gb|BP853213.1|BP853213 BP853213 RAFL21 Arabidopsis thaliana... 112 1e-023
gb|F14116.1|F14116 ATTS5038 Versailles-VB Arabidopsis thali... 89 3e-023
gb|BP847984.1|BP847984 BP847984 RAFL21 Arabidopsis thaliana... 107 4e-023
emb|AJ596108.1| Arabidopsis thaliana T-DNA flanking sequenc... 73 2e-021
gb|BP860241.1|BP860241 BP860241 RAFL21 Arabidopsis thaliana... 103 6e-021
>ref|NM_122467.2| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/
zinc ion binding AT5G25560 mRNA, complete cds
Length = 1034
Score = 309 bits (669), Expect = 7e-083
Identities = 106/150 (70%), Positives = 124/150 (82%)
Frame = +3 / +3
Query: 342 EKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQVVC 521
++G+M YGCPHYRRRC IRAPCCNEIF C HCH E KN+I +D+ +RH++PRH+V+QV+C
Sbjct: 270 DRGLMEYGCPHYRRRCCIRAPCCNEIFGCHHCHYEAKNNINVDQKQRHDIPRHQVEQVIC 449
Query: 522 SLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXENFFHCS 701
LCGTEQEV Q+CI+CGVCMGKYFC +CKL+DDD SK+QYHC+ ENFFHC
Sbjct: 450 LLCGTEQEVGQICIHCGVCMGKYFCKVCKLYDDDTSKKQYHCDGCGICRIGGRENFFHCY 629
Query: 702 KCGCCYSIALKNSHACVEGAMHHDCPICFE 791
KCGCCYSI LKN H CVEGAMHHDCPICFE
Sbjct: 630 KCGCCYSILLKNGHPCVEGAMHHDCPICFE 719
Score = 175 bits (376), Expect = 2e-042
Identities = 88/150 (58%), Positives = 93/150 (62%)
Frame = -3 / -2
Query: 790 SKQIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSK 611
SKQ+GQS*CIAPST * F IE*Q PH Q KKFS Q YC L+ SSS
Sbjct: 718 SKQMGQS*CIAPSTQG*PFLRRIE*QQPHL*Q*KKFSRPPILQIPHPSQWYCFLDVSSS* 539
Query: 610 SLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQC 431
SL QKYFPM TPQ I TSCSVP ++ TC T WRG SCL S M F S Q
Sbjct: 538 SLQTLQKYFPMHTPQWIQIWPTSCSVPQSKQITCSTWWRGISCLCF*STFMLFFAS**Q* 359
Query: 430 RQSKISLQQGALMRHLLL*CGHP*CIIPFS 341
Q KISLQQGALM+HLLL*CGHP I P S
Sbjct: 358 WQPKISLQQGALMQHLLL*CGHPYSISPLS 269
Score = 153 bits (329), Expect = 6e-036
Identities = 71/146 (48%), Positives = 96/146 (65%)
Frame = -2 / -1
Query: 791 LEADWTVMMHRPFNTCMTILQRN*IATSTF*TVEEILPPSDSTYSTSVAVILLFRDIIVE 612
L+A+ V+MH F+T +T+L+ +*I T+T TV+EI SDS ST +AV+L FR II+
Sbjct: 719 LKANGAVVMHCSFDTRVTVLEED*ITTATLVTVKEIFTSSDSANSTPIAVVLFFRRIIIV 540
Query: 611 EFAQTTEVFPHANTAIDTYLSHLLFSATQ*AYNLLHFMAWKFMPLHFINFNGILSFIVAV 432
E A TEV PHA++ +DT L+HLLFS T+* NL + +A MPL I +L I+ V
Sbjct: 539 ELADFTEVLPHAHSTVDTNLAHLLFSTTK*TNNLFNLVARNIMPLLLIYIYVVLRLIMTV 360
Query: 431 SAIKNFIAARSSYAASPSIMWTPIVH 354
A K+ I ARSS A S+MWT I+H
Sbjct: 359 MATKDLITARSSNATPSSVMWTSILH 282
Score = 122 bits (262), Expect = 1e-026
Identities = 69/153 (45%), Positives = 91/153 (59%)
Frame = +1 / +1
Query: 334 RNLRKG*CTMGVHIIEGDAA*ELLAAMKFLIADTATMKLRIPLKLIK*RGMNFHAMKCSR 513
++L + * +M VHI E A ELLA M+ L+A T M+ R I+ RGM F A K +R
Sbjct: 262 KSLIED*WSMDVHITEEGVALELLAVMRSLVAITVIMRRRTT*M*IRSRGMIFLATKLNR 441
Query: 514 LYAHCVALNRRCDKYVSIAVFAWGNTSVVCANSSTMMSLNSSITATDVEYVESEGGRISS 693
L+ + V LN+R K+VS AWG+TSV A+S+ M+ L +S TA VE+ ESE +IS
Sbjct: 442 LFVYFVVLNKRWAKFVSTVECAWGSTSVKSASSTMMIRLKNSTTAMGVEFAESEDVKISF 621
Query: 694 TVQNVDVAIQLR*RIVMHVLKGRCIMTVQSASS 792
TV +V V IQ R V V K +CI T A S
Sbjct: 622 TVTSVAVVIQSSSRTVTLVSKEQCITTAPFALS 720
Score = 94.1 bits (199), Expect(2) = 1e-022
Identities = 47/103 (45%), Positives = 68/103 (66%)
Frame = +2 / +2
Query: 479 EA*TSTP*SAAGCMLIVWH*TGGATSMYQLRCLHGEILLWFVQTLRR*CL*TAVSLQRMW 658
EA* S+P S G + +W+*T G ++Y L +HGE+LL +Q LR * +* V L+ +W
Sbjct: 407 EA*YSSPPS*TGYLFTLWY*TRGGPNLYPLWSVHGEVLL*SLQALR**YV*KTVPLRWVW 586
Query: 659 NM*NRREGEFLPLFKMWMLLFNCAEE*SCMC*RGDAS*LSNLL 787
N+ NRR +FL L ++W+LLFN +E S +C R +AS L +LL
Sbjct: 587 NLQNRRT*KFLSLLQVWLLLFNPPQERSPLCRRSNASRLPHLL 715
Score = 87.7 bits (185), Expect(2) = 1e-022
Identities = 46/106 (43%), Positives = 56/106 (52%)
Frame = -1 / -3
Query: 792 TRSRLDSHDASPLQHMHDYSSAQLNSNIHILNSGRNSPSLRFYIFHIRCSDTAV*RHHRR 613
T+S+ S DA L+H D S LN+N H NS RN LRF FH S T * +H R
Sbjct: 720 TQSKWGSRDALLLRHKGDRS*GGLNNNSHTCNSERNFHVLRFCKFHTHRSGTVF*TYHHR 541
Query: 612 RVCTNHRSISPCKHRN*YILVAPPVQCHTMSIQPAALHGVEVHASS 475
R C +RS SPC + Y P VQ H ++ P L G E HAS+
Sbjct: 540 RACRLYRSTSPCTLHSGYKFGPPLVQYHKVNK*PVQLGGEEYHASA 403
Score = 41.4 bits (84), Expect(2) = 1e-022
Identities = 19/35 (54%), Positives = 21/35 (60%)
Frame = -1 / -3
Query: 444 HCGSVGNQKFHCSKELLCGISFYNVDTHSALSLSQ 340
H S GNQ+ H SKEL C F NVD H+ L L Q
Sbjct: 372 HNDSDGNQRSHYSKEL*CNTFFCNVDIHTPLVLYQ 268
Score = 35.0 bits (70), Expect(2) = 1e-022
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +2 / +2
Query: 347 RDNALWVSTL*KEMPHKSSLLQ*NF*LPTLPQ*N*EFH 460
R N +W+STL K++ H SSLL *+ LP+L * E H
Sbjct: 275 RTNGVWMSTLQKKVLH*SSLL**DLWLPSLSL*GEEQH 388
>gb|AY070720.1| Arabidopsis thaliana AT5g25560/T14C9_100 mRNA sequence
Length = 2903
Score = 295 bits (639), Expect = 1e-078
Identities = 102/142 (71%), Positives = 117/142 (82%)
Frame = +3 / +2
Query: 366 CPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQVVCSLCGTEQE 545
CPHYRRRC IRAPCCNEIF C HCH E KN+I +D+ +RH++PRH+V+QV+C LCGTEQE
Sbjct: 1850 CPHYRRRCCIRAPCCNEIFGCHHCHYEAKNNINVDQKQRHDIPRHQVEQVICLLCGTEQE 2029
Query: 546 VRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXENFFHCSKCGCCYSI 725
V Q+CI+CGVCMGKYFC +CKL+DDD SK+QYHC+ ENFFHC KCGCCYSI
Sbjct: 2030 VGQICIHCGVCMGKYFCKVCKLYDDDTSKKQYHCDGCGICRIGGRENFFHCYKCGCCYSI 2209
Query: 726 ALKNSHACVEGAMHHDCPICFE 791
LKN H CVEGAMHHDCPICFE
Sbjct: 2210 LLKNGHPCVEGAMHHDCPICFE 2275
Score = 168 bits (361), Expect = 2e-040
Identities = 84/142 (59%), Positives = 89/142 (62%)
Frame = -3 / -3
Query: 790 SKQIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSK 611
SKQ+GQS*CIAPST * F IE*Q PH Q KKFS Q YC L+ SSS
Sbjct: 2274 SKQMGQS*CIAPSTQG*PFLRRIE*QQPHL*Q*KKFSRPPILQIPHPSQWYCFLDVSSS* 2095
Query: 610 SLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQC 431
SL QKYFPM TPQ I TSCSVP ++ TC T WRG SCL S M F S Q
Sbjct: 2094 SLQTLQKYFPMHTPQWIQIWPTSCSVPQSKQITCSTWWRGISCLCF*STFMLFFAS**Q* 1915
Query: 430 RQSKISLQQGALMRHLLL*CGH 365
Q KISLQQGALM+HLLL*CGH
Sbjct: 1914 WQPKISLQQGALMQHLLL*CGH 1849
Score = 148 bits (317), Expect = 3e-034
Identities = 69/142 (48%), Positives = 93/142 (65%)
Frame = -2 / -2
Query: 791 LEADWTVMMHRPFNTCMTILQRN*IATSTF*TVEEILPPSDSTYSTSVAVILLFRDIIVE 612
L+A+ V+MH F+T +T+L+ +*I T+T TV+EI SDS ST +AV+L FR II+
Sbjct: 2275 LKANGAVVMHCSFDTRVTVLEED*ITTATLVTVKEIFTSSDSANSTPIAVVLFFRRIIIV 2096
Query: 611 EFAQTTEVFPHANTAIDTYLSHLLFSATQ*AYNLLHFMAWKFMPLHFINFNGILSFIVAV 432
E A TEV PHA++ +DT L+HLLFS T+* NL + +A MPL I +L I+ V
Sbjct: 2095 ELADFTEVLPHAHSTVDTNLAHLLFSTTK*TNNLFNLVARNIMPLLLIYIYVVLRLIMTV 1916
Query: 431 SAIKNFIAARSSYAASPSIMWT 366
A K+ I ARSS A S+MWT
Sbjct: 1915 MATKDLITARSSNATPSSVMWT 1850
Score = 119 bits (254), Expect = 1e-025
Identities = 66/142 (46%), Positives = 84/142 (59%)
Frame = +1 / +3
Query: 367 VHIIEGDAA*ELLAAMKFLIADTATMKLRIPLKLIK*RGMNFHAMKCSRLYAHCVALNRR 546
VHI E A ELLA M+ L+A T M+ R I+ RGM F A K +RL+ + V LN+R
Sbjct: 1851 VHITEEGVALELLAVMRSLVAITVIMRRRTT*M*IRSRGMIFLATKLNRLFVYFVVLNKR 2030
Query: 547 CDKYVSIAVFAWGNTSVVCANSSTMMSLNSSITATDVEYVESEGGRISSTVQNVDVAIQL 726
K+VS AWG+TSV A+S+ M+ L +S TA VE+ ESE +IS TV +V V IQ
Sbjct: 2031 WAKFVSTVECAWGSTSVKSASSTMMIRLKNSTTAMGVEFAESEDVKISFTVTSVAVVIQS 2210
Query: 727 R*RIVMHVLKGRCIMTVQSASS 792
R V V K +CI T A S
Sbjct: 2211 SSRTVTLVSKEQCITTAPFALS 2276
>gb|AY052362.1| Arabidopsis thaliana AT5g22920/MRN17_15 mRNA, complete cds
Length = 1183
Score = 290 bits (628), Expect = 3e-077
Identities = 102/161 (63%), Positives = 122/161 (75%)
Frame = +3 / +2
Query: 309 NGSNPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHE 488
N N + E G HYGC HYRRRC+IRAPCC+EIFDCRHCHNE K+S+ I++ RHE
Sbjct: 173 NEQNQEFANLMEIGSGHYGCSHYRRRCKIRAPCCDEIFDCRHCHNEAKDSLHIEQHHRHE 352
Query: 489 LPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXX 668
LPRHEV +V+CSLC TEQ+V+Q C NCGVCMGKYFC CK FDDD+SK+QYHC+
Sbjct: 353 LPRHEVSKVICSLCETEQDVQQNCSNCGVCMGKYFCSKCKFFDDDLSKKQYHCDECGICR 532
Query: 669 XXXXENFFHCSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
ENFFHC +C CCYS +++ H CVEGAMHH+CP+CFE
Sbjct: 533 TGGEENFFHCKRCRCCYSKIMEDKHQCVEGAMHHNCPVCFE 655
Score = 190 bits (410), Expect = 4e-047
Identities = 92/150 (61%), Positives = 97/150 (64%)
Frame = -3 / -2
Query: 790 SKQIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSK 611
SKQ GQ *CIAPSTH L +E*QH H QWKKFS Q*YC LE SSSK
Sbjct: 654 SKQTGQL*CIAPSTHWCLSSIILE*QHRHLLQWKKFSSPPVLQIPHSSQ*YCFLERSSSK 475
Query: 610 SLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQC 431
+LH QKYFP+ TPQL C TSCSV +EH T TS RGSSCL SI E L SLWQC
Sbjct: 474 NLHFEQKYFPIHTPQLEQFC*TSCSVSQSEHMTFETSCRGSSCL*CCSI*RESLASLWQC 295
Query: 430 RQSKISLQQGALMRHLLL*CGHP*CIIPFS 341
QSKIS Q GAL+ H LL*C HP*C P S
Sbjct: 294 LQSKISSQHGALILHRLL*CEHP*CPDPIS 205
Score = 119 bits (254), Expect = 1e-025
Identities = 62/145 (42%), Positives = 84/145 (57%)
Frame = -2 / -1
Query: 791 LEADWTVMMHRPFNTCMTILQRN*IATSTF*TVEEILPPSDSTYSTSVAVILLFRDIIVE 612
L+ + ++MH FNT + +L +ATS +E++ S T + VILL IIVE
Sbjct: 655 LKTNRAIVMHSAFNTLVFVLHNFGVATSASFAMEKVFFSSGPANPTLITVILLLGKIIVE 476
Query: 611 EFAQTTEVFPHANTAIDTYLSHLLFSATQ*AYNLLHFMAWKFMPLHFINFNGILSFIVAV 432
E A TEV PH T I L ++LF T+ AY+L +FM+ K M + N ILSF+VA+
Sbjct: 475 ELAF*TEVLPHTYTTIGAVLLNVLFCLTKRAYDL*NFMSRKLMSMMLFNMKRILSFVVAM 296
Query: 431 SAIKNFIAARSSYAASPSIMWTPIV 357
SAIKN I S AS SIM TP++
Sbjct: 295 SAIKNLITTWCSNLASSSIM*TPVM 221
>gb|BT002635.1| Arabidopsis thaliana At5g22920/MRN17_15 gene, complete cds
Length = 876
Score = 290 bits (628), Expect = 3e-077
Identities = 102/161 (63%), Positives = 122/161 (75%)
Frame = +3 / +1
Query: 309 NGSNPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHE 488
N N + E G HYGC HYRRRC+IRAPCC+EIFDCRHCHNE K+S+ I++ RHE
Sbjct: 22 NEQNQEFANLMEIGSGHYGCSHYRRRCKIRAPCCDEIFDCRHCHNEAKDSLHIEQHHRHE 201
Query: 489 LPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXX 668
LPRHEV +V+CSLC TEQ+V+Q C NCGVCMGKYFC CK FDDD+SK+QYHC+
Sbjct: 202 LPRHEVSKVICSLCETEQDVQQNCSNCGVCMGKYFCSKCKFFDDDLSKKQYHCDECGICR 381
Query: 669 XXXXENFFHCSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
ENFFHC +C CCYS +++ H CVEGAMHH+CP+CFE
Sbjct: 382 TGGEENFFHCKRCRCCYSKIMEDKHQCVEGAMHHNCPVCFE 504
Score = 190 bits (410), Expect = 4e-047
Identities = 92/150 (61%), Positives = 97/150 (64%)
Frame = -3 / -2
Query: 790 SKQIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSK 611
SKQ GQ *CIAPSTH L +E*QH H QWKKFS Q*YC LE SSSK
Sbjct: 503 SKQTGQL*CIAPSTHWCLSSIILE*QHRHLLQWKKFSSPPVLQIPHSSQ*YCFLERSSSK 324
Query: 610 SLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQC 431
+LH QKYFP+ TPQL C TSCSV +EH T TS RGSSCL SI E L SLWQC
Sbjct: 323 NLHFEQKYFPIHTPQLEQFC*TSCSVSQSEHMTFETSCRGSSCL*CCSI*RESLASLWQC 144
Query: 430 RQSKISLQQGALMRHLLL*CGHP*CIIPFS 341
QSKIS Q GAL+ H LL*C HP*C P S
Sbjct: 143 LQSKISSQHGALILHRLL*CEHP*CPDPIS 54
Score = 119 bits (254), Expect = 1e-025
Identities = 62/145 (42%), Positives = 84/145 (57%)
Frame = -2 / -1
Query: 791 LEADWTVMMHRPFNTCMTILQRN*IATSTF*TVEEILPPSDSTYSTSVAVILLFRDIIVE 612
L+ + ++MH FNT + +L +ATS +E++ S T + VILL IIVE
Sbjct: 504 LKTNRAIVMHSAFNTLVFVLHNFGVATSASFAMEKVFFSSGPANPTLITVILLLGKIIVE 325
Query: 611 EFAQTTEVFPHANTAIDTYLSHLLFSATQ*AYNLLHFMAWKFMPLHFINFNGILSFIVAV 432
E A TEV PH T I L ++LF T+ AY+L +FM+ K M + N ILSF+VA+
Sbjct: 324 ELAF*TEVLPHTYTTIGAVLLNVLFCLTKRAYDL*NFMSRKLMSMMLFNMKRILSFVVAM 145
Query: 431 SAIKNFIAARSSYAASPSIMWTPIV 357
SAIKN I S AS SIM TP++
Sbjct: 144 SAIKNLITTWCSNLASSSIM*TPVM 70
>gb|AY088138.1| Arabidopsis thaliana clone 41666 mRNA, complete sequence
Length = 1145
Score = 290 bits (628), Expect = 3e-077
Identities = 102/161 (63%), Positives = 122/161 (75%)
Frame = +3 / +2
Query: 309 NGSNPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHE 488
N N + E G HYGC HYRRRC+IRAPCC+EIFDCRHCHNE K+S+ I++ RHE
Sbjct: 173 NEQNQEFANLMEIGSGHYGCSHYRRRCKIRAPCCDEIFDCRHCHNEAKDSLHIEQHHRHE 352
Query: 489 LPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXX 668
LPRHEV +V+CSLC TEQ+V+Q C NCGVCMGKYFC CK FDDD+SK+QYHC+
Sbjct: 353 LPRHEVSKVICSLCETEQDVQQNCSNCGVCMGKYFCSKCKFFDDDLSKKQYHCDECGICR 532
Query: 669 XXXXENFFHCSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
ENFFHC +C CCYS +++ H CVEGAMHH+CP+CFE
Sbjct: 533 TGGEENFFHCKRCRCCYSKIMEDKHQCVEGAMHHNCPVCFE 655
Score = 190 bits (410), Expect = 4e-047
Identities = 92/150 (61%), Positives = 97/150 (64%)
Frame = -3 / -3
Query: 790 SKQIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSK 611
SKQ GQ *CIAPSTH L +E*QH H QWKKFS Q*YC LE SSSK
Sbjct: 654 SKQTGQL*CIAPSTHWCLSSIILE*QHRHLLQWKKFSSPPVLQIPHSSQ*YCFLERSSSK 475
Query: 610 SLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQC 431
+LH QKYFP+ TPQL C TSCSV +EH T TS RGSSCL SI E L SLWQC
Sbjct: 474 NLHFEQKYFPIHTPQLEQFC*TSCSVSQSEHMTFETSCRGSSCL*CCSI*RESLASLWQC 295
Query: 430 RQSKISLQQGALMRHLLL*CGHP*CIIPFS 341
QSKIS Q GAL+ H LL*C HP*C P S
Sbjct: 294 LQSKISSQHGALILHRLL*CEHP*CPDPIS 205
Score = 121 bits (258), Expect = 4e-026
Identities = 63/145 (43%), Positives = 84/145 (57%)
Frame = -2 / -2
Query: 791 LEADWTVMMHRPFNTCMTILQRN*IATSTF*TVEEILPPSDSTYSTSVAVILLFRDIIVE 612
L+ + ++MH FNT + +L +ATS +EE+ S T + VILL IIVE
Sbjct: 655 LKTNRAIVMHSAFNTLVFVLHNFGVATSASFAMEEVFFSSGPANPTLITVILLLGKIIVE 476
Query: 611 EFAQTTEVFPHANTAIDTYLSHLLFSATQ*AYNLLHFMAWKFMPLHFINFNGILSFIVAV 432
E A TEV PH T I L ++LF T+ AY+L +FM+ K M + N ILSF+VA+
Sbjct: 475 ELAF*TEVLPHTYTTIGAVLLNVLFCLTKRAYDL*NFMSRKLMSMMLFNMKRILSFVVAM 296
Query: 431 SAIKNFIAARSSYAASPSIMWTPIV 357
SAIKN I S AS SIM TP++
Sbjct: 295 SAIKNLITTWCSNLASSSIM*TPVM 221
Score = 105 bits (223), Expect = 2e-021
Identities = 60/135 (44%), Positives = 73/135 (54%)
Frame = +1 / +3
Query: 364 GVHIIEGDAA*ELLAAMKFLIADTATMKLRIPLKLIK*RGMNFHAMKCSRLYAHCVALNR 543
GVHIIE DA E M+FLIAD AT KLRI L M+F MK R YA V N+
Sbjct: 228 GVHIIEDDARLEHHVVMRFLIADIATTKLRILFILNSIIDMSFLDMKFQRSYARFVRQNK 407
Query: 544 RCDKYVSIAVFAWGNTSVVCANSSTMMSLNSSITATDVEYVESEGGRISSTVQNVDVAIQ 723
K I V+ WG+TSV A+SSTM+ S+IT V + E + SS ++ DVA
Sbjct: 408 TFSKTAPIVVYVWGSTSVQNASSSTMIFPRSNITVMSVGFAGPEEKKTSSIAKDADVATP 587
Query: 724 LR*RIVMHVLKGRCI 768
R +VLK CI
Sbjct: 588 KLWRTNTNVLKALCI 632
>gb|DQ059131.1| Arabidopsis thaliana RING finger family protein (At5g22920) mRNA,
complete cds
Length = 876
Score = 290 bits (628), Expect = 3e-077
Identities = 102/161 (63%), Positives = 122/161 (75%)
Frame = +3 / +1
Query: 309 NGSNPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHE 488
N N + E G HYGC HYRRRC+IRAPCC+EIFDCRHCHNE K+S+ I++ RHE
Sbjct: 22 NEQNQEFANLMEIGSGHYGCSHYRRRCKIRAPCCDEIFDCRHCHNEAKDSLHIEQHHRHE 201
Query: 489 LPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXX 668
LPRHEV +V+CSLC TEQ+V+Q C NCGVCMGKYFC CK FDDD+SK+QYHC+
Sbjct: 202 LPRHEVSKVICSLCETEQDVQQNCSNCGVCMGKYFCSKCKFFDDDLSKKQYHCDECGICR 381
Query: 669 XXXXENFFHCSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
ENFFHC +C CCYS +++ H CVEGAMHH+CP+CFE
Sbjct: 382 TGGEENFFHCKRCRCCYSKIMEDKHQCVEGAMHHNCPVCFE 504
Score = 190 bits (410), Expect = 4e-047
Identities = 92/150 (61%), Positives = 97/150 (64%)
Frame = -3 / -2
Query: 790 SKQIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSK 611
SKQ GQ *CIAPSTH L +E*QH H QWKKFS Q*YC LE SSSK
Sbjct: 503 SKQTGQL*CIAPSTHWCLSSIILE*QHRHLLQWKKFSSPPVLQIPHSSQ*YCFLERSSSK 324
Query: 610 SLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQC 431
+LH QKYFP+ TPQL C TSCSV +EH T TS RGSSCL SI E L SLWQC
Sbjct: 323 NLHFEQKYFPIHTPQLEQFC*TSCSVSQSEHMTFETSCRGSSCL*CCSI*RESLASLWQC 144
Query: 430 RQSKISLQQGALMRHLLL*CGHP*CIIPFS 341
QSKIS Q GAL+ H LL*C HP*C P S
Sbjct: 143 LQSKISSQHGALILHRLL*CEHP*CPDPIS 54
Score = 119 bits (254), Expect = 1e-025
Identities = 62/145 (42%), Positives = 84/145 (57%)
Frame = -2 / -1
Query: 791 LEADWTVMMHRPFNTCMTILQRN*IATSTF*TVEEILPPSDSTYSTSVAVILLFRDIIVE 612
L+ + ++MH FNT + +L +ATS +E++ S T + VILL IIVE
Sbjct: 504 LKTNRAIVMHSAFNTLVFVLHNFGVATSASFAMEKVFFSSGPANPTLITVILLLGKIIVE 325
Query: 611 EFAQTTEVFPHANTAIDTYLSHLLFSATQ*AYNLLHFMAWKFMPLHFINFNGILSFIVAV 432
E A TEV PH T I L ++LF T+ AY+L +FM+ K M + N ILSF+VA+
Sbjct: 324 ELAF*TEVLPHTYTTIGAVLLNVLFCLTKRAYDL*NFMSRKLMSMMLFNMKRILSFVVAM 145
Query: 431 SAIKNFIAARSSYAASPSIMWTPIV 357
SAIKN I S AS SIM TP++
Sbjct: 144 SAIKNLITTWCSNLASSSIM*TPVM 70
>ref|NM_122198.2| Arabidopsis thaliana ubiquitin-protein ligase/ zinc ion binding
AT5G22920 mRNA, complete cds
Length = 1262
Score = 290 bits (628), Expect = 3e-077
Identities = 102/161 (63%), Positives = 122/161 (75%)
Frame = +3 / +3
Query: 309 NGSNPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHE 488
N N + E G HYGC HYRRRC+IRAPCC+EIFDCRHCHNE K+S+ I++ RHE
Sbjct: 174 NEQNQEFANLMEIGSGHYGCSHYRRRCKIRAPCCDEIFDCRHCHNEAKDSLHIEQHHRHE 353
Query: 489 LPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXX 668
LPRHEV +V+CSLC TEQ+V+Q C NCGVCMGKYFC CK FDDD+SK+QYHC+
Sbjct: 354 LPRHEVSKVICSLCETEQDVQQNCSNCGVCMGKYFCSKCKFFDDDLSKKQYHCDECGICR 533
Query: 669 XXXXENFFHCSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
ENFFHC +C CCYS +++ H CVEGAMHH+CP+CFE
Sbjct: 534 TGGEENFFHCKRCRCCYSKIMEDKHQCVEGAMHHNCPVCFE 656
Score = 190 bits (410), Expect = 4e-047
Identities = 92/150 (61%), Positives = 97/150 (64%)
Frame = -3 / -2
Query: 790 SKQIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSK 611
SKQ GQ *CIAPSTH L +E*QH H QWKKFS Q*YC LE SSSK
Sbjct: 655 SKQTGQL*CIAPSTHWCLSSIILE*QHRHLLQWKKFSSPPVLQIPHSSQ*YCFLERSSSK 476
Query: 610 SLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQC 431
+LH QKYFP+ TPQL C TSCSV +EH T TS RGSSCL SI E L SLWQC
Sbjct: 475 NLHFEQKYFPIHTPQLEQFC*TSCSVSQSEHMTFETSCRGSSCL*CCSI*RESLASLWQC 296
Query: 430 RQSKISLQQGALMRHLLL*CGHP*CIIPFS 341
QSKIS Q GAL+ H LL*C HP*C P S
Sbjct: 295 LQSKISSQHGALILHRLL*CEHP*CPDPIS 206
Score = 119 bits (254), Expect = 1e-025
Identities = 62/145 (42%), Positives = 84/145 (57%)
Frame = -2 / -1
Query: 791 LEADWTVMMHRPFNTCMTILQRN*IATSTF*TVEEILPPSDSTYSTSVAVILLFRDIIVE 612
L+ + ++MH FNT + +L +ATS +E++ S T + VILL IIVE
Sbjct: 656 LKTNRAIVMHSAFNTLVFVLHNFGVATSASFAMEKVFFSSGPANPTLITVILLLGKIIVE 477
Query: 611 EFAQTTEVFPHANTAIDTYLSHLLFSATQ*AYNLLHFMAWKFMPLHFINFNGILSFIVAV 432
E A TEV PH T I L ++LF T+ AY+L +FM+ K M + N ILSF+VA+
Sbjct: 476 ELAF*TEVLPHTYTTIGAVLLNVLFCLTKRAYDL*NFMSRKLMSMMLFNMKRILSFVVAM 297
Query: 431 SAIKNFIAARSSYAASPSIMWTPIV 357
SAIKN I S AS SIM TP++
Sbjct: 296 SAIKNLITTWCSNLASSSIM*TPVM 222
>emb|BX831389.1|CNS0A1NP Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS85ZE03 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 2640
Score = 281 bits (609), Expect = 1e-074
Identities = 99/153 (64%), Positives = 116/153 (75%)
Frame = +3 / +3
Query: 333 EKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQ 512
E ++ G Y RRC IRAPCCNEIF C HCH E KN+I +D+ +RH++PRH+V+Q
Sbjct: 1620 ESLTNKVLDRGLMEYGRRCCIRAPCCNEIFGCHHCHYEAKNNINVDQKQRHDIPRHQVEQ 1799
Query: 513 VVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXENFF 692
V+C LCGTEQEV Q+CI+CGVCMGKYFC +CKL+DDD SK+QYHC+ EN F
Sbjct: 1800 VICLLCGTEQEVGQICIHCGVCMGKYFCKVCKLYDDDTSKKQYHCDGCGICRIGGRENLF 1979
Query: 693 HCSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
HC KCGCCYSI LKN H CVEGAMHHDCPICFE
Sbjct: 1980 HCYKCGCCYSILLKNGHPCVEGAMHHDCPICFE 2078
Score = 154 bits (330), Expect = 4e-036
Identities = 78/137 (56%), Positives = 84/137 (61%)
Frame = -3 / -3
Query: 790 SKQIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSK 611
SKQ+GQS*CIAPST * F IE*Q PH Q K+FS Q YC L+ SSS
Sbjct: 2077 SKQMGQS*CIAPSTQG*PFLRRIE*QQPHL*Q*KRFSRPPILQIPHPSQWYCFLDVSSS* 1898
Query: 610 SLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQC 431
SL QKYFPM TPQ I TSCSVP ++ TC T WRG SCL S M F S Q
Sbjct: 1897 SLQTLQKYFPMHTPQWIQIWPTSCSVPQSKQITCSTWWRGISCLCF*STFMLFFAS**Q* 1718
Query: 430 RQSKISLQQGALMRHLL 380
Q KISLQQGALM+HLL
Sbjct: 1717 WQPKISLQQGALMQHLL 1667
Score = 139 bits (299), Expect = 8e-032
Identities = 67/140 (47%), Positives = 91/140 (65%)
Frame = -2 / -2
Query: 791 LEADWTVMMHRPFNTCMTILQRN*IATSTF*TVEEILPPSDSTYSTSVAVILLFRDIIVE 612
L+A+ V+MH F+T +T+L+ +*I T+T TV+EI SDS ST +AV+L FR II+
Sbjct: 2078 LKANGAVVMHCSFDTRVTVLEED*ITTATLVTVKEIFTSSDSANSTPIAVVLFFRRIIIV 1899
Query: 611 EFAQTTEVFPHANTAIDTYLSHLLFSATQ*AYNLLHFMAWKFMPLHFINFNGILSFIVAV 432
E A TEV PHA++ +DT L+HLLFS T+* NL + +A MPL I +L I+ V
Sbjct: 1898 ELADFTEVLPHAHSTVDTNLAHLLFSTTK*TNNLFNLVARNIMPLLLIYIYVVLRLIMTV 1719
Query: 431 SAIKNFIAARSSYAASPSIM 372
A K+ I ARSS A SI+
Sbjct: 1718 MATKDLITARSSNATPSSIL 1659
Score = 112 bits (240), Expect = 1e-023
Identities = 63/139 (45%), Positives = 82/139 (58%)
Frame = +1 / +1
Query: 376 IEGDAA*ELLAAMKFLIADTATMKLRIPLKLIK*RGMNFHAMKCSRLYAHCVALNRRCDK 555
+E A ELLA M+ L+A T M+ R I+ RGM F A K +RL+ + V LN+R K
Sbjct: 1663 MEEGVALELLAVMRSLVAITVIMRRRTT*M*IRSRGMIFLATKLNRLFVYFVVLNKRWAK 1842
Query: 556 YVSIAVFAWGNTSVVCANSSTMMSLNSSITATDVEYVESEGGRISSTVQNVDVAIQLR*R 735
+VS AWG+TSV A+S+ M+ L +S TA VE+ ESE +IS TV +V V IQ R
Sbjct: 1843 FVSTVECAWGSTSVKSASSTMMIRLKNSTTAMGVEFAESEDVKISFTVTSVAVVIQSSSR 2022
Query: 736 IVMHVLKGRCIMTVQSASS 792
V V K +CI T A S
Sbjct: 2023 TVTLVSKEQCITTAPFALS 2079
>ref|NM_121870.3| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/
zinc ion binding AT5G18650 mRNA, complete cds
Length = 1480
Score = 171 bits (368), Expect(2) = 5e-061
Identities = 58/104 (55%), Positives = 74/104 (71%)
Frame = +3 / +1
Query: 480 RHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXX 659
RH+L R +V+QV+CS+C TEQ QVC NCGV MG+YFC +C +DDD KQQ+HC+
Sbjct: 511 RHDLVRQDVKQVICSVCDTEQPAAQVCSNCGVNMGEYFCSICIFYDDDTEKQQFHCDDCG 690
Query: 660 XXXXXXXENFFHCSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
ENFFHC KCG CY++ L+N+H CVE +M H CPIC+E
Sbjct: 691 ICRVGGRENFFHCKKCGSCYAVGLRNNHRCVENSMRHHCPICYE 822
Score = 85.8 bits (181), Expect(2) = 5e-061
Identities = 26/44 (59%), Positives = 37/44 (84%)
Frame = +3 / +1
Query: 333 EKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIK 464
++ G M +GC HY+RRC+IRAPCCNE+FDCRHCHNE+ ++++
Sbjct: 367 DRLHFGKMGFGCKHYKRRCQIRAPCCNEVFDCRHCHNESTSTLR 498
Score = 81.3 bits (171), Expect(2) = 7e-023
Identities = 45/100 (45%), Positives = 48/100 (48%)
Frame = -3 / -3
Query: 784 QIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSKSL 605
Q+GQ * I ST L *Q PHF QWKKFS Q* CC SSS ++
Sbjct: 815 QMGQ**RIEFSTQRWLLRRPTA*QDPHFLQWKKFSRPPTLQIPQSSQ*NCCFSVSSS*NM 636
Query: 604 HKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSS 485
QKY PM TPQ T CSV E TC TS R S
Sbjct: 635 QMLQKYSPMLTPQFEQT*AAGCSVSQTEQITCLTS*RTRS 516
Score = 48.3 bits (99), Expect(2) = 7e-023
Identities = 23/35 (65%), Positives = 27/35 (77%)
Frame = -3 / -3
Query: 451 LVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIP 347
++SL Q RQSK SLQ GAL+ HLLL*C HP I+P
Sbjct: 485 VLSL*QWRQSKTSLQHGALIWHLLL*CLHPKPILP 381
>gb|AY064060.1| Arabidopsis thaliana unknown protein (At5g18650) mRNA, complete cds
Length = 1470
Score = 171 bits (368), Expect(2) = 5e-061
Identities = 58/104 (55%), Positives = 74/104 (71%)
Frame = +3 / +1
Query: 480 RHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXX 659
RH+L R +V+QV+CS+C TEQ QVC NCGV MG+YFC +C +DDD KQQ+HC+
Sbjct: 502 RHDLVRQDVKQVICSVCDTEQPAAQVCSNCGVNMGEYFCSICIFYDDDTEKQQFHCDDCG 681
Query: 660 XXXXXXXENFFHCSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
ENFFHC KCG CY++ L+N+H CVE +M H CPIC+E
Sbjct: 682 ICRVGGRENFFHCKKCGSCYAVGLRNNHRCVENSMRHHCPICYE 813
Score = 85.8 bits (181), Expect(2) = 5e-061
Identities = 26/44 (59%), Positives = 37/44 (84%)
Frame = +3 / +1
Query: 333 EKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIK 464
++ G M +GC HY+RRC+IRAPCCNE+FDCRHCHNE+ ++++
Sbjct: 358 DRLHFGKMGFGCKHYKRRCQIRAPCCNEVFDCRHCHNESTSTLR 489
Score = 81.3 bits (171), Expect(2) = 7e-023
Identities = 45/100 (45%), Positives = 48/100 (48%)
Frame = -3 / -2
Query: 784 QIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSKSL 605
Q+GQ * I ST L *Q PHF QWKKFS Q* CC SSS ++
Sbjct: 806 QMGQ**RIEFSTQRWLLRRPTA*QDPHFLQWKKFSRPPTLQIPQSSQ*NCCFSVSSS*NM 627
Query: 604 HKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSS 485
QKY PM TPQ T CSV E TC TS R S
Sbjct: 626 QMLQKYSPMLTPQFEQT*AAGCSVSQTEQITCLTS*RTRS 507
Score = 48.3 bits (99), Expect(2) = 7e-023
Identities = 23/35 (65%), Positives = 27/35 (77%)
Frame = -3 / -2
Query: 451 LVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIP 347
++SL Q RQSK SLQ GAL+ HLLL*C HP I+P
Sbjct: 476 VLSL*QWRQSKTSLQHGALIWHLLL*CLHPKPILP 372
>emb|BX829794.1|CNS0A03H Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB37ZF09 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1413
Score = 171 bits (368), Expect(2) = 5e-061
Identities = 58/104 (55%), Positives = 74/104 (71%)
Frame = +3 / +2
Query: 480 RHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXX 659
RH+L R +V+QV+CS+C TEQ QVC NCGV MG+YFC +C +DDD KQQ+HC+
Sbjct: 488 RHDLVRQDVKQVICSVCDTEQPAAQVCSNCGVNMGEYFCSICIFYDDDTEKQQFHCDDCG 667
Query: 660 XXXXXXXENFFHCSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
ENFFHC KCG CY++ L+N+H CVE +M H CPIC+E
Sbjct: 668 ICRVGGRENFFHCKKCGSCYAVGLRNNHRCVENSMRHHCPICYE 799
Score = 85.8 bits (181), Expect(2) = 5e-061
Identities = 26/44 (59%), Positives = 37/44 (84%)
Frame = +3 / +2
Query: 333 EKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIK 464
++ G M +GC HY+RRC+IRAPCCNE+FDCRHCHNE+ ++++
Sbjct: 344 DRLHFGKMGFGCKHYKRRCQIRAPCCNEVFDCRHCHNESTSTLR 475
Score = 81.3 bits (171), Expect(2) = 7e-023
Identities = 45/100 (45%), Positives = 48/100 (48%)
Frame = -3 / -1
Query: 784 QIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSKSL 605
Q+GQ * I ST L *Q PHF QWKKFS Q* CC SSS ++
Sbjct: 792 QMGQ**RIEFSTQRWLLRRPTA*QDPHFLQWKKFSRPPTLQIPQSSQ*NCCFSVSSS*NM 613
Query: 604 HKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSS 485
QKY PM TPQ T CSV E TC TS R S
Sbjct: 612 QMLQKYSPMLTPQFEQT*AAGCSVSQTEQITCLTS*RTRS 493
Score = 48.3 bits (99), Expect(2) = 7e-023
Identities = 23/35 (65%), Positives = 27/35 (77%)
Frame = -3 / -1
Query: 451 LVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIP 347
++SL Q RQSK SLQ GAL+ HLLL*C HP I+P
Sbjct: 462 VLSL*QWRQSKTSLQHGALIWHLLL*CLHPKPILP 358
>gb|AY096370.1| Arabidopsis thaliana unknown protein (At5g18650) mRNA, complete cds
Length = 835
Score = 171 bits (368), Expect(2) = 5e-061
Identities = 58/104 (55%), Positives = 74/104 (71%)
Frame = +3 / +1
Query: 480 RHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXX 659
RH+L R +V+QV+CS+C TEQ QVC NCGV MG+YFC +C +DDD KQQ+HC+
Sbjct: 163 RHDLVRQDVKQVICSVCDTEQPAAQVCSNCGVNMGEYFCSICIFYDDDTEKQQFHCDDCG 342
Query: 660 XXXXXXXENFFHCSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
ENFFHC KCG CY++ L+N+H CVE +M H CPIC+E
Sbjct: 343 ICRVGGRENFFHCKKCGSCYAVGLRNNHRCVENSMRHHCPICYE 474
Score = 85.8 bits (181), Expect(2) = 5e-061
Identities = 26/44 (59%), Positives = 37/44 (84%)
Frame = +3 / +1
Query: 333 EKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIK 464
++ G M +GC HY+RRC+IRAPCCNE+FDCRHCHNE+ ++++
Sbjct: 19 DRLHFGKMGFGCKHYKRRCQIRAPCCNEVFDCRHCHNESTSTLR 150
Score = 81.3 bits (171), Expect(2) = 7e-023
Identities = 45/100 (45%), Positives = 48/100 (48%)
Frame = -3 / -3
Query: 784 QIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSKSL 605
Q+GQ * I ST L *Q PHF QWKKFS Q* CC SSS ++
Sbjct: 467 QMGQ**RIEFSTQRWLLRRPTA*QDPHFLQWKKFSRPPTLQIPQSSQ*NCCFSVSSS*NM 288
Query: 604 HKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSS 485
QKY PM TPQ T CSV E TC TS R S
Sbjct: 287 QMLQKYSPMLTPQFEQT*AAGCSVSQTEQITCLTS*RTRS 168
Score = 48.3 bits (99), Expect(2) = 7e-023
Identities = 23/35 (65%), Positives = 27/35 (77%)
Frame = -3 / -3
Query: 451 LVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIP 347
++SL Q RQSK SLQ GAL+ HLLL*C HP I+P
Sbjct: 137 VLSL*QWRQSKTSLQHGALIWHLLL*CLHPKPILP 33
>emb|CQ803772.1| Sequence 183 from Patent WO2004035798
Length = 804
Score = 171 bits (368), Expect(2) = 5e-061
Identities = 58/104 (55%), Positives = 74/104 (71%)
Frame = +3 / +1
Query: 480 RHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXX 659
RH+L R +V+QV+CS+C TEQ QVC NCGV MG+YFC +C +DDD KQQ+HC+
Sbjct: 163 RHDLVRQDVKQVICSVCDTEQPAAQVCSNCGVNMGEYFCSICIFYDDDTEKQQFHCDDCG 342
Query: 660 XXXXXXXENFFHCSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
ENFFHC KCG CY++ L+N+H CVE +M H CPIC+E
Sbjct: 343 ICRVGGRENFFHCKKCGSCYAVGLRNNHRCVENSMRHHCPICYE 474
Score = 85.8 bits (181), Expect(2) = 5e-061
Identities = 26/44 (59%), Positives = 37/44 (84%)
Frame = +3 / +1
Query: 333 EKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIK 464
++ G M +GC HY+RRC+IRAPCCNE+FDCRHCHNE+ ++++
Sbjct: 19 DRLHFGKMGFGCKHYKRRCQIRAPCCNEVFDCRHCHNESTSTLR 150
Score = 81.3 bits (171), Expect(2) = 7e-023
Identities = 45/100 (45%), Positives = 48/100 (48%)
Frame = -3 / -2
Query: 784 QIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSKSL 605
Q+GQ * I ST L *Q PHF QWKKFS Q* CC SSS ++
Sbjct: 467 QMGQ**RIEFSTQRWLLRRPTA*QDPHFLQWKKFSRPPTLQIPQSSQ*NCCFSVSSS*NM 288
Query: 604 HKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSS 485
QKY PM TPQ T CSV E TC TS R S
Sbjct: 287 QMLQKYSPMLTPQFEQT*AAGCSVSQTEQITCLTS*RTRS 168
Score = 48.3 bits (99), Expect(2) = 7e-023
Identities = 23/35 (65%), Positives = 27/35 (77%)
Frame = -3 / -2
Query: 451 LVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIP 347
++SL Q RQSK SLQ GAL+ HLLL*C HP I+P
Sbjct: 137 VLSL*QWRQSKTSLQHGALIWHLLL*CLHPKPILP 33
>ref|NM_116162.4| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/
zinc ion binding AT3G62970 mRNA, complete cds
Length = 1088
Score = 166 bits (357), Expect(2) = 1e-057
Identities = 55/108 (50%), Positives = 76/108 (70%)
Frame = +3 / +3
Query: 468 DKMKRHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHC 647
D +RH+L R V+QVVCS+C TEQEV +VC NCGV MG+YFC +CK FDDD+SK+Q+HC
Sbjct: 204 DPKERHDLVRQNVKQVVCSICQTEQEVAKVCSNCGVNMGEYFCDICKFFDDDISKEQFHC 383
Query: 648 NXXXXXXXXXXENFFHCSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
+ + FFHC CG CY + L++ H+C+E + + CP+C+E
Sbjct: 384 DDCGICRVGGRDKFFHCQNCGACYGMGLRDKHSCIENSTKNSCPVCYE 527
Score = 79.9 bits (168), Expect(2) = 1e-057
Identities = 25/38 (65%), Positives = 31/38 (81%)
Frame = +3 / +3
Query: 348 GIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSI 461
G +GC HY+RRC+IRAPCCN IF CRHCHN++ NS+
Sbjct: 87 GKFQFGCEHYKRRCKIRAPCCNLIFSCRHCHNDSANSL 200
Score = 77.1 bits (162), Expect(2) = 1e-022
Identities = 44/100 (44%), Positives = 47/100 (47%)
Frame = -3 / -2
Query: 784 QIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSKSL 605
Q GQ + S H L I *Q P F Q K S Q* C E SSSK+L
Sbjct: 520 QTGQEFFVEFSMHECLSRKPIP*QAPQFWQ*KNLSRPPTLQIPQSSQ*NCSFEISSSKNL 341
Query: 604 HKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSS 485
QKY P+ TPQ T TSCSV E TTC T WR S
Sbjct: 340 QISQKYSPILTPQFEQTLATSCSV*QIEQTTCLTFWRTKS 221
Score = 51.9 bits (107), Expect(2) = 1e-022
Identities = 23/39 (58%), Positives = 26/39 (66%)
Frame = -3 / -2
Query: 457 EFLVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIPFS 341
EF SLWQ R K+ LQQGAL+ H LL*C HP +P S
Sbjct: 196 EFAESLWQWRHEKMRLQQGALILHRLL*CSHPNWNLPKS 80
>emb|BX825642.1|CNS0A514 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL52ZF09 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 947
Score = 166 bits (357), Expect(2) = 1e-057
Identities = 55/108 (50%), Positives = 76/108 (70%)
Frame = +3 / +2
Query: 468 DKMKRHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHC 647
D +RH+L R V+QVVCS+C TEQEV +VC NCGV MG+YFC +CK FDDD+SK+Q+HC
Sbjct: 173 DPKERHDLVRQNVKQVVCSICQTEQEVAKVCSNCGVNMGEYFCDICKFFDDDISKEQFHC 352
Query: 648 NXXXXXXXXXXENFFHCSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
+ + FFHC CG CY + L++ H+C+E + + CP+C+E
Sbjct: 353 DDCGICRVGGRDKFFHCQNCGACYGMGLRDKHSCIENSTKNSCPVCYE 496
Score = 79.9 bits (168), Expect(2) = 1e-057
Identities = 25/38 (65%), Positives = 31/38 (81%)
Frame = +3 / +2
Query: 348 GIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSI 461
G +GC HY+RRC+IRAPCCN IF CRHCHN++ NS+
Sbjct: 56 GKFQFGCEHYKRRCKIRAPCCNLIFSCRHCHNDSANSL 169
Score = 77.1 bits (162), Expect(2) = 1e-022
Identities = 44/100 (44%), Positives = 47/100 (47%)
Frame = -3 / -3
Query: 784 QIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSKSL 605
Q GQ + S H L I *Q P F Q K S Q* C E SSSK+L
Sbjct: 489 QTGQEFFVEFSMHECLSRKPIP*QAPQFWQ*KNLSRPPTLQIPQSSQ*NCSFEISSSKNL 310
Query: 604 HKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSS 485
QKY P+ TPQ T TSCSV E TTC T WR S
Sbjct: 309 QISQKYSPILTPQFEQTLATSCSV*QIEQTTCLTFWRTKS 190
Score = 51.9 bits (107), Expect(2) = 1e-022
Identities = 23/39 (58%), Positives = 26/39 (66%)
Frame = -3 / -3
Query: 457 EFLVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIPFS 341
EF SLWQ R K+ LQQGAL+ H LL*C HP +P S
Sbjct: 165 EFAESLWQWRHEKMRLQQGALILHRLL*CSHPNWNLPKS 49
>gb|BT006418.1| Arabidopsis thaliana At3g62970 gene, complete cds
Length = 831
Score = 166 bits (357), Expect(2) = 1e-057
Identities = 55/108 (50%), Positives = 76/108 (70%)
Frame = +3 / +1
Query: 468 DKMKRHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHC 647
D +RH+L R V+QVVCS+C TEQEV +VC NCGV MG+YFC +CK FDDD+SK+Q+HC
Sbjct: 169 DPKERHDLVRQNVKQVVCSICQTEQEVAKVCSNCGVNMGEYFCDICKFFDDDISKEQFHC 348
Query: 648 NXXXXXXXXXXENFFHCSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
+ + FFHC CG CY + L++ H+C+E + + CP+C+E
Sbjct: 349 DDCGICRVGGRDKFFHCQNCGACYGMGLRDKHSCIENSTKNSCPVCYE 492
Score = 79.9 bits (168), Expect(2) = 1e-057
Identities = 25/38 (65%), Positives = 31/38 (81%)
Frame = +3 / +1
Query: 348 GIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSI 461
G +GC HY+RRC+IRAPCCN IF CRHCHN++ NS+
Sbjct: 52 GKFQFGCEHYKRRCKIRAPCCNLIFSCRHCHNDSANSL 165
Score = 77.1 bits (162), Expect(2) = 1e-022
Identities = 44/100 (44%), Positives = 47/100 (47%)
Frame = -3 / -2
Query: 784 QIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSKSL 605
Q GQ + S H L I *Q P F Q K S Q* C E SSSK+L
Sbjct: 485 QTGQEFFVEFSMHECLSRKPIP*QAPQFWQ*KNLSRPPTLQIPQSSQ*NCSFEISSSKNL 306
Query: 604 HKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSS 485
QKY P+ TPQ T TSCSV E TTC T WR S
Sbjct: 305 QISQKYSPILTPQFEQTLATSCSV*QIEQTTCLTFWRTKS 186
Score = 51.9 bits (107), Expect(2) = 1e-022
Identities = 23/39 (58%), Positives = 26/39 (66%)
Frame = -3 / -2
Query: 457 EFLVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIPFS 341
EF SLWQ R K+ LQQGAL+ H LL*C HP +P S
Sbjct: 161 EFAESLWQWRHEKMRLQQGALILHRLL*CSHPNWNLPKS 45
>gb|CA781795.1|CA781795 050D05AF Infected Arabidopsis Leaf Arabidopsis thaliana cDNA, mRNA
sequence
Length = 693
Score = 171 bits (368), Expect(2) = 1e-057
Identities = 58/104 (55%), Positives = 74/104 (71%)
Frame = +3 / +1
Query: 480 RHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXX 659
RH+L R +V+QV+CS+C TEQ QVC NCGV MG+YFC +C +DDD KQQ+HC+
Sbjct: 106 RHDLVRQDVKQVICSVCDTEQPAAQVCSNCGVNMGEYFCSICIFYDDDTEKQQFHCDDCG 285
Query: 660 XXXXXXXENFFHCSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
ENFFHC KCG CY++ L+N+H CVE +M H CPIC+E
Sbjct: 286 ICRVGGRENFFHCKKCGSCYAVGLRNNHRCVENSMRHHCPICYE 417
Score = 74.8 bits (157), Expect(2) = 1e-057
Identities = 22/31 (70%), Positives = 30/31 (96%)
Frame = +3 / +1
Query: 372 HYRRRCRIRAPCCNEIFDCRHCHNETKNSIK 464
HY+RRC+IRAPCCNE+FDCRHCHNE+ ++++
Sbjct: 1 HYKRRCQIRAPCCNEVFDCRHCHNESTSTLR 93
>gb|BP562733.1|BP562733 BP562733 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-39-O20 5',
mRNA sequence
Length = 662
Score = 166 bits (357), Expect(2) = 1e-057
Identities = 55/108 (50%), Positives = 76/108 (70%)
Frame = +3 / +3
Query: 468 DKMKRHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHC 647
D +RH+L R V+QVVCS+C TEQEV +VC NCGV MG+YFC +CK FDDD+SK+Q+HC
Sbjct: 210 DPKERHDLVRQNVKQVVCSICQTEQEVAKVCSNCGVNMGEYFCDICKFFDDDISKEQFHC 389
Query: 648 NXXXXXXXXXXENFFHCSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
+ + FFHC CG CY + L++ H+C+E + + CP+C+E
Sbjct: 390 DDCGICRVGGRDKFFHCQNCGACYGMGLRDKHSCIENSTKNSCPVCYE 533
Score = 79.9 bits (168), Expect(2) = 1e-057
Identities = 25/38 (65%), Positives = 31/38 (81%)
Frame = +3 / +3
Query: 348 GIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSI 461
G +GC HY+RRC+IRAPCCN IF CRHCHN++ NS+
Sbjct: 93 GKFQFGCEHYKRRCKIRAPCCNLIFSCRHCHNDSANSL 206
Score = 77.1 bits (162), Expect(2) = 1e-022
Identities = 44/100 (44%), Positives = 47/100 (47%)
Frame = -3 / -2
Query: 784 QIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSKSL 605
Q GQ + S H L I *Q P F Q K S Q* C E SSSK+L
Sbjct: 526 QTGQEFFVEFSMHECLSRKPIP*QAPQFWQ*KNLSRPPTLQIPQSSQ*NCSFEISSSKNL 347
Query: 604 HKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSS 485
QKY P+ TPQ T TSCSV E TTC T WR S
Sbjct: 346 QISQKYSPILTPQFEQTLATSCSV*QIEQTTCLTFWRTKS 227
Score = 51.9 bits (107), Expect(2) = 1e-022
Identities = 23/39 (58%), Positives = 26/39 (66%)
Frame = -3 / -2
Query: 457 EFLVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIPFS 341
EF SLWQ R K+ LQQGAL+ H LL*C HP +P S
Sbjct: 202 EFAESLWQWRHEKMRLQQGALILHRLL*CSHPNWNLPKS 86
>emb|BX830637.1|CNS0A048 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB95ZF05 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1393
Score = 160 bits (343), Expect(2) = 1e-057
Identities = 55/104 (52%), Positives = 70/104 (67%)
Frame = +3 / +1
Query: 480 RHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXX 659
R +L R +V+QV+CS+C TEQ QVC NCGV MG+YFC +C +DDD QQ HC+
Sbjct: 490 RDDLVRQDVKQVICSVCDTEQPAAQVCSNCGVNMGEYFCSICIFYDDDTETQQLHCDDCG 669
Query: 660 XXXXXXXENFFHCSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
EN FHC KCG CY++ L+N+H CVE +M H CPIC+E
Sbjct: 670 ICRVGGRENLFHCKKCGSCYAVGLRNNHRCVENSMRHHCPICYE 801
Score = 85.8 bits (181), Expect(2) = 1e-057
Identities = 26/44 (59%), Positives = 37/44 (84%)
Frame = +3 / +1
Query: 333 EKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIK 464
++ G M +GC HY+RRC+IRAPCCNE+FDCRHCHNE+ ++++
Sbjct: 346 DRLHFGKMGFGCEHYKRRCQIRAPCCNEVFDCRHCHNESTSTLR 477
Score = 80.3 bits (169), Expect(2) = 4e-023
Identities = 44/100 (44%), Positives = 49/100 (49%)
Frame = -3 / -3
Query: 784 QIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSKSL 605
Q+GQ * I ST L *Q PHF QWK+FS Q* CC+ SSS ++
Sbjct: 794 QMGQ**RIEFSTQRWLLRRPTA*QDPHFLQWKRFSRPPTLQIPQSSQ*SCCVSVSSS*NM 615
Query: 604 HKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSS 485
QKY PM TPQ T CSV E TC TS R S
Sbjct: 614 QMLQKYSPMLTPQFEQT*AAGCSVSQTEQITCLTS*RTRS 495
Score = 50.1 bits (103), Expect(2) = 4e-023
Identities = 23/35 (65%), Positives = 27/35 (77%)
Frame = -3 / -3
Query: 451 LVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIP 347
++SL Q RQSK SLQ GAL+ HLLL*C HP I+P
Sbjct: 464 VLSL*QWRQSKTSLQHGALIWHLLL*CSHPKPILP 360
>gb|AV560651.1|AV560651 AV560651 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ138c08F 3', mRNA sequence
Length = 594
Score = 220 bits (474), Expect = 6e-056
Identities = 73/103 (70%), Positives = 91/103 (88%)
Frame = +3 / -3
Query: 342 EKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQVVC 521
++G+M YGCPHYRRRC IRAPCCNEIF C HCH E KN+I +D+ +RH++PRH+V+QV+C
Sbjct: 325 DRGLMEYGCPHYRRRCCIRAPCCNEIFGCHHCHYEAKNNINVDQKQRHDIPRHQVEQVIC 146
Query: 522 SLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCN 650
LCGTEQEV Q+CI+CGVCMGKYFC +CKL+DDD SK+QYHC+
Sbjct: 145 LLCGTEQEVGQICIHCGVCMGKYFCKVCKLYDDDTSKKQYHCD 17
Score = 129 bits (277), Expect = 8e-029
Identities = 62/102 (60%), Positives = 66/102 (64%)
Frame = -3 / +3
Query: 646 Q*YCCLETSSSKSLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILS 467
Q YC L+ SSS SL QKYFPM TPQ I TSCSVP ++ TC T WRG SCL S
Sbjct: 21 QWYCFLDVSSS*SLQTLQKYFPMHTPQWIQIWPTSCSVPQSKQITCSTWWRGISCLCF*S 200
Query: 466 ILMEFLVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIPFS 341
M F S Q Q KISLQQGALM+HLLL*CGHP I P S
Sbjct: 201 TFMLFFAS**Q*WQPKISLQQGALMQHLLL*CGHPYSISPLS 326
Score = 113 bits (241), Expect = 8e-024
Identities = 51/102 (50%), Positives = 66/102 (64%)
Frame = -2 / +2
Query: 659 STSVAVILLFRDIIVEEFAQTTEVFPHANTAIDTYLSHLLFSATQ*AYNLLHFMAWKFMP 480
ST +AV+L FR II+ E A TEV PHA++ +DT L+HLLFS T+* NL + +A MP
Sbjct: 8 STPIAVVLFFRRIIIVELADFTEVLPHAHSTVDTNLAHLLFSTTK*TNNLFNLVARNIMP 187
Query: 479 LHFINFNGILSFIVAVSAIKNFIAARSSYAASPSIMWTPIVH 354
L I +L I+ V A K+ I ARSS A S+MWT I+H
Sbjct: 188 LLLIYIYVVLRLIMTVMATKDLITARSSNATPSSVMWTSILH 313
>emb|BX841616.1|CNS09YKN Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB20ZD07 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1154
Score = 171 bits (368), Expect(3) = 2e-055
Identities = 58/104 (55%), Positives = 74/104 (71%)
Frame = +3 / +3
Query: 480 RHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXX 659
RH+L R +V+QV+CS+C TEQ QVC NCGV MG+YFC +C +DDD KQQ+HC+
Sbjct: 477 RHDLVRQDVKQVICSVCDTEQPAAQVCSNCGVNMGEYFCSICIFYDDDTEKQQFHCDDCG 656
Query: 660 XXXXXXXENFFHCSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
ENFFHC KCG CY++ L+N+H CVE +M H CPIC+E
Sbjct: 657 ICRVGGRENFFHCKKCGSCYAVGLRNNHRCVENSMRHHCPICYE 788
Score = 57.4 bits (119), Expect(3) = 2e-055
Identities = 18/30 (60%), Positives = 24/30 (80%)
Frame = +3 / +2
Query: 333 EKFEKGIMHYGCPHYRRRCRIRAPCCNEIF 422
++ G M +GC HY+RRC+IRAPCCNE+F
Sbjct: 332 DRLHFGKMGFGCKHYKRRCQIRAPCCNEVF 421
Score = 28.6 bits (56), Expect(3) = 2e-055
Identities = 7/13 (53%), Positives = 12/13 (92%)
Frame = +3 / +3
Query: 426 CRHCHNETKNSIK 464
CRHCHNE+ ++++
Sbjct: 426 CRHCHNESTSTLR 464
>gb|AV826141.1|AV826141 AV826141 RAFL8 Arabidopsis thaliana cDNA clone RAFL08-09-P06 5',
mRNA sequence
Length = 632
Score = 202 bits (435), Expect(2) = 4e-055
Identities = 73/109 (66%), Positives = 86/109 (78%)
Frame = +3 / +1
Query: 309 NGSNPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHE 488
N N + E G HYGC HYRRRC+IRAPCC+EIFDCRHCHNE K+S+ I++ RHE
Sbjct: 175 NEQNQEFANLMEIGSGHYGCSHYRRRCKIRAPCCDEIFDCRHCHNEAKDSLHIEQHHRHE 354
Query: 489 LPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQ 635
LPRHEV +V+CSLC TEQ+V+Q C NCGVCMGKYFC CK FDDD+SK+
Sbjct: 355 LPRHEVSKVICSLCETEQDVQQNCSNCGVCMGKYFCSKCKFFDDDLSKK 501
Score = 134 bits (287), Expect(2) = 1e-031
Identities = 63/97 (64%), Positives = 67/97 (69%)
Frame = -3 / -1
Query: 631 LETSSSKSLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEF 452
LE SSSK+LH QKYFP+ TPQL C TSCSV +EH T TS RGSSCL SI E
Sbjct: 497 LERSSSKNLHFEQKYFPIHTPQLEQFC*TSCSVSQSEHMTFETSCRGSSCL*CCSI*RES 318
Query: 451 LVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIPFS 341
L SLWQC QSKIS Q GAL+ H LL*C HP*C P S
Sbjct: 317 LASLWQCLQSKISSQHGALILHRLL*CEHP*CPDPIS 207
Score = 35.4 bits (71), Expect(2) = 4e-055
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / +3
Query: 681 ENFFHCSKCGCCYS 722
ENF HC +C CCYS
Sbjct: 549 ENFXHCKRCRCCYS 590
Score = 24.4 bits (47), Expect(2) = 1e-031
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -3 / -2
Query: 724 IE*QHPHFEQWKKFS 680
+E*QH H Q KKFS
Sbjct: 592 LE*QHRHLLQXKKFS 548
>gb|CB259861.1|CB259861 18-E011177-013-009-C06-T7R MPIZ-ADIS-013 Arabidopsis thaliana cDNA
clone MPIZp770C069Q 5-PRIME, mRNA sequence
Length = 473
Score = 184 bits (397), Expect(2) = 2e-048
Identities = 66/101 (65%), Positives = 79/101 (78%)
Frame = +3 / +1
Query: 309 NGSNPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHE 488
N N + E G HYGC HYRRRC+IRAPCC+EIFDCRHCHNE K+S+ I++ RHE
Sbjct: 133 NEQNQEFANLMEIGSGHYGCSHYRRRCKIRAPCCDEIFDCRHCHNEAKDSLHIEQHHRHE 312
Query: 489 LPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKL 611
LPRHEV +V+CSLC TEQ+V+Q C NCGVCMGKYFC C++
Sbjct: 313 LPRHEVSKVICSLCETEQDVQQNCSNCGVCMGKYFCSKCQV 435
Score = 121 bits (258), Expect(2) = 2e-027
Identities = 56/91 (61%), Positives = 61/91 (67%)
Frame = -3 / -1
Query: 613 KSLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQ 434
++ H QKYFP+ TPQL C TSCSV +EH T TS RGSSCL SI E L SLWQ
Sbjct: 437 RTWHFEQKYFPIHTPQLEQFC*TSCSVSQSEHMTFETSCRGSSCL*CCSI*RESLASLWQ 258
Query: 433 CRQSKISLQQGALMRHLLL*CGHP*CIIPFS 341
C QSKIS Q GAL+ H LL*C HP*C P S
Sbjct: 257 CLQSKISSQHGALILHRLL*CEHP*CPDPIS 165
Score = 30.4 bits (60), Expect(2) = 2e-048
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = +3 / +2
Query: 606 KLFDDDVSKQQYH 644
K FDDD+SK+QYH
Sbjct: 431 KFFDDDLSKKQYH 469
Score = 24.0 bits (46), Expect(2) = 2e-027
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3 / -3
Query: 646 Q*YCCLETSSSKSL 605
+*YC LE SSSK+L
Sbjct: 471 K*YCFLERSSSKNL 430
>gb|AC006601.1|AC006601 Arabidopsis thaliana chromosome V map near 60.5 cM, complete sequence
Length = 110684
Score = 74.8 bits (157), Expect(6) = 5e-045
Identities = 26/30 (86%), Positives = 26/30 (86%)
Frame = +3 / +1
Query: 702 KCGCCYSIALKNSHACVEGAMHHDCPICFE 791
K GCCYSI LKN H CVEGAMHHDCPICFE
Sbjct: 58513 KPGCCYSILLKNGHPCVEGAMHHDCPICFE 58602
Score = 72.5 bits (152), Expect(6) = 5e-045
Identities = 24/29 (82%), Positives = 24/29 (82%)
Frame = +3 / +3
Query: 366 CPHYRRRCRIRAPCCNEIFDCRHCHNETK 452
CPHYRRRC IRAPCCNEIF C HCH E K
Sbjct: 57537 CPHYRRRCCIRAPCCNEIFGCHHCHYEAK 57623
Score = 66.1 bits (138), Expect(6) = 5e-045
Identities = 22/29 (75%), Positives = 27/29 (93%)
Frame = +3 / +2
Query: 543 EVRQVCINCGVCMGKYFCGLCKLFDDDVS 629
+V Q+CI+CGVCMGKYFC +CKL+DDDVS
Sbjct: 58010 QVGQICIHCGVCMGKYFCKVCKLYDDDVS 58096
Score = 37.7 bits (76), Expect(6) = 5e-045
Identities = 11/22 (50%), Positives = 20/22 (90%)
Frame = +3 / +1
Query: 450 KNSIKIDKMKRHELPRHEVQQV 515
+N+I +D+ +RH++PRH+V+QV
Sbjct: 57724 QNNINVDQKQRHDIPRHQVEQV 57789
Score = 32.2 bits (64), Expect(6) = 5e-045
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +3 / +2
Query: 492 PRHEVQQVVCSLCGTEQEV 548
P QV+C LCGTEQEV
Sbjct: 57854 PLSSSSQVICLLCGTEQEV 57910
Score = 29.5 bits (58), Expect(6) = 5e-045
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +3 / +1
Query: 681 ENFFHCSKCG 710
ENFFHC KCG
Sbjct: 58384 ENFFHCYKCG 58413
>gb|BP823729.1|BP823729 BP823729 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-07-F23 5',
mRNA sequence
Length = 392
Score = 111 bits (237), Expect(2) = 3e-041
Identities = 39/61 (63%), Positives = 50/61 (81%)
Frame = +3 / +3
Query: 468 DKMKRHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHC 647
D +RH+L R V+QVVCS+C TEQEV +VC NCGV MG+YFC +CK FDDD+SK+Q+HC
Sbjct: 186 DPKERHDLVRQNVKQVVCSICQTEQEVAKVCSNCGVNMGEYFCDICKFFDDDISKEQFHC 365
Query: 648 N 650
+
Sbjct: 366 D 368
Score = 79.9 bits (168), Expect(2) = 3e-041
Identities = 25/38 (65%), Positives = 31/38 (81%)
Frame = +3 / +3
Query: 348 GIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSI 461
G +GC HY+RRC+IRAPCCN IF CRHCHN++ NS+
Sbjct: 69 GKFQFGCEHYKRRCKIRAPCCNLIFSCRHCHNDSANSL 182
>gb|BP798029.1|BP798029 BP798029 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-05-L17 5',
mRNA sequence
Length = 391
Score = 111 bits (237), Expect(2) = 3e-041
Identities = 39/61 (63%), Positives = 50/61 (81%)
Frame = +3 / +3
Query: 468 DKMKRHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHC 647
D +RH+L R V+QVVCS+C TEQEV +VC NCGV MG+YFC +CK FDDD+SK+Q+HC
Sbjct: 204 DPKERHDLVRQNVKQVVCSICQTEQEVAKVCSNCGVNMGEYFCDICKFFDDDISKEQFHC 383
Query: 648 N 650
+
Sbjct: 384 D 386
Score = 79.9 bits (168), Expect(2) = 3e-041
Identities = 25/38 (65%), Positives = 31/38 (81%)
Frame = +3 / +3
Query: 348 GIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSI 461
G +GC HY+RRC+IRAPCCN IF CRHCHN++ NS+
Sbjct: 87 GKFQFGCEHYKRRCKIRAPCCNLIFSCRHCHNDSANSL 200
>dbj|AB005243.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MRN17
Length = 86065
Score = 78.5 bits (165), Expect(5) = 1e-039
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = +3 / +2
Query: 360 YGCPHYRRRCRIRAPCCNEIFDCRHCHNETK 452
+ C HYRRRC+IRAPCC+EIFDCRHCHNE K
Sbjct: 59795 FRCSHYRRRCKIRAPCCDEIFDCRHCHNEAK 59887
Score = 65.2 bits (136), Expect(5) = 1e-039
Identities = 22/37 (59%), Positives = 27/37 (72%)
Frame = +3 / +3
Query: 681 ENFFHCSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
E F K GCCYS +++ H CVEGAMHH+CP+CFE
Sbjct: 60681 EILFCFLKTGCCYSKIMEDKHQCVEGAMHHNCPVCFE 60791
Score = 63.4 bits (132), Expect(5) = 1e-039
Identities = 22/29 (75%), Positives = 24/29 (82%)
Frame = +3 / +2
Query: 543 EVRQVCINCGVCMGKYFCGLCKLFDDDVS 629
+V+Q C NCGVCMGKYFC CK FDDDVS
Sbjct: 60275 QVQQNCSNCGVCMGKYFCSKCKFFDDDVS 60361
Score = 33.6 bits (67), Expect(5) = 1e-039
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +3 / +3
Query: 450 KNSIKIDKMKRHELPRHEVQQV 515
++S+ I++ RHELPRHEV +V
Sbjct: 60012 QDSLHIEQHHRHELPRHEVSKV 60077
Score = 29.0 bits (57), Expect(5) = 1e-039
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = +3 / +1
Query: 510 QVVCSLCGTEQEV 548
QV+CSLC TEQ+V
Sbjct: 60157 QVICSLCETEQDV 60195
>gb|Z37684.1|Z37684 ATTS4149 Versailles-VB Arabidopsis thaliana cDNA clone VBVJH04,
mRNA sequence
Length = 405
Score = 100 bits (213), Expect(4) = 2e-038
Identities = 34/57 (59%), Positives = 44/57 (77%)
Frame = +3 / +3
Query: 480 RHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCN 650
RH+L R +V+QV+CS+C TEQ QVC NCGV MG+YFC +C +DDD KQQ+HC+
Sbjct: 129 RHDLVRQDVKQVICSVCDTEQPAAQVCSNCGVNMGEYFCSICIFYDDDTEKQQFHCD 299
Score = 52.8 bits (109), Expect(4) = 2e-038
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = +3 / +1
Query: 348 GIMHYGCPHYRRRCRIRAPCCNE 416
G M +GC HY+RRC+IRAPCCNE
Sbjct: 1 GKMGFGCKHYKRRCQIRAPCCNE 69
Score = 34.1 bits (68), Expect(4) = 2e-038
Identities = 9/15 (60%), Positives = 14/15 (93%)
Frame = +3 / +3
Query: 420 FDCRHCHNETKNSIK 464
FDCRHCHNE+ ++++
Sbjct: 72 FDCRHCHNESTSTLR 116
Score = 30.4 bits (60), Expect(4) = 2e-038
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +3 / +1
Query: 681 ENFFHCSKCG 710
ENFFHC KCG
Sbjct: 331 ENFFHCKKCG 360
>gb|BP833602.1|BP833602 BP833602 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-96-M12 5',
mRNA sequence
Length = 375
Score = 74.8 bits (157), Expect(3) = 1e-032
Identities = 24/38 (63%), Positives = 30/38 (78%)
Frame = +3 / +2
Query: 348 GIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSI 461
G +GC H +RRC+IRAPCCN IF CRHCHN++ NS+
Sbjct: 71 GKFQFGCEH*KRRCKIRAPCCNLIFSCRHCHNDSANSL 184
Score = 71.2 bits (149), Expect(3) = 1e-032
Identities = 28/47 (59%), Positives = 35/47 (74%)
Frame = +3 / +2
Query: 468 DKMKRHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCK 608
D +RH+L R V+QVV S+C TEQEV +VC NCGV MG+YF +CK
Sbjct: 188 DPKERHDLVRQNVKQVVGSICQTEQEVAKVCSNCGVNMGEYFRDICK 328
Score = 34.5 bits (69), Expect(3) = 1e-032
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +3 / +1
Query: 582 GKYFCGLCKLFDDDVSKQQYHCN 650
G+ ++FDDD+SK+Q+HC+
Sbjct: 301 GRILSRYLQIFDDDISKEQFHCD 369
>gb|AC051627.4|AC051627 Genomic Sequence For Arabidopsis thaliana Clone T1A4 From Chromosome V,
complete sequence
Length = 85746
Score = 76.2 bits (160), Expect(5) = 1e-031
Identities = 23/28 (82%), Positives = 27/28 (96%)
Frame = +3 / -1
Query: 366 CPHYRRRCRIRAPCCNEIFDCRHCHNET 449
C HY+RRC+IRAPCCNE+FDCRHCHNE+
Sbjct: 43692 CKHYKRRCQIRAPCCNEVFDCRHCHNES 43609
Score = 55.1 bits (114), Expect(5) = 1e-031
Identities = 17/33 (51%), Positives = 23/33 (69%)
Frame = +3 / -1
Query: 693 HCSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
H G CY++ L+N+H CVE +M H CPIC+E
Sbjct: 42798 HYLLLGSCYAVGLRNNHRCVENSMRHHCPICYE 42700
Score = 51.5 bits (106), Expect(5) = 1e-031
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = +3 / -2
Query: 543 EVRQVCINCGVCMGKYFCGLCKLFDDDV 626
+ QVC NCGV MG+YFC +C +DDDV
Sbjct: 43229 QAAQVCSNCGVNMGEYFCSICIFYDDDV 43146
Score = 30.4 bits (60), Expect(5) = 1e-031
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +3 / -3
Query: 681 ENFFHCSKCG 710
ENFFHC KCG
Sbjct: 42907 ENFFHCKKCG 42878
Score = 28.6 bits (56), Expect(5) = 1e-031
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3 / -1
Query: 504 VQQVVCSLCGTEQEVRQVCI 563
V QV+CS+C TEQ V + I
Sbjct: 43377 VLQVICSVCDTEQPVIPITI 43318
>gb|BP824281.1|BP824281 BP824281 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-09-B04 5',
mRNA sequence
Length = 403
Score = 85.8 bits (181), Expect(2) = 4e-031
Identities = 26/44 (59%), Positives = 37/44 (84%)
Frame = +3 / +1
Query: 333 EKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIK 464
++ G M +GC HY+RRC+IRAPCCNE+FDCRHCHNE+ ++++
Sbjct: 136 DRLHFGKMGFGCKHYKRRCQIRAPCCNEVFDCRHCHNESTSTLR 267
Score = 71.6 bits (150), Expect(2) = 4e-031
Identities = 25/41 (60%), Positives = 32/41 (78%)
Frame = +3 / +1
Query: 480 RHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGL 602
RH+L R +V+QV+CS+C TEQ QVC NCGV MG+YFC +
Sbjct: 280 RHDLVRQDVKQVICSVCDTEQPAAQVCSNCGVNMGEYFCSI 402
>gb|BP813040.1|BP813040 BP813040 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-05-D11 5',
mRNA sequence
Length = 408
Score = 95.0 bits (201), Expect(3) = 9e-031
Identities = 35/58 (60%), Positives = 45/58 (77%)
Frame = +3 / +2
Query: 468 DKMKRHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQY 641
D +RH+L R V+QVVCS+C TEQEV +VC N GV MG+YFC +CK DDD+SK+Q+
Sbjct: 188 DPKERHDLVRQNVKQVVCSICKTEQEVAKVCSNGGVNMGEYFCDICKFLDDDISKEQF 361
Score = 41.4 bits (84), Expect(3) = 9e-031
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +3 / +2
Query: 360 YGCPHYRRRCRIRAPC 407
+GC HY+RRC+IRAPC
Sbjct: 83 FGCEHYKRRCKIRAPC 130
Score = 37.7 bits (76), Expect(3) = 9e-031
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +3 / +3
Query: 408 CNEIFDCRHCHNETKNSIKIDK 473
CN IF CRHCHN++ N I K
Sbjct: 132 CNLIFSCRHCHNDSANLFLILK 197
>gb|BP853639.1|BP853639 BP853639 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-58-P07 5',
mRNA sequence
Length = 394
Score = 131 bits (280), Expect = 3e-029
Identities = 47/73 (64%), Positives = 56/73 (76%)
Frame = +3 / +2
Query: 309 NGSNPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHE 488
N N + E G HYGCPHYRRRC+IRAPCC+EI DCRHCHNE K+S+ I++ RHE
Sbjct: 167 NEQNQEFANLMEIGSGHYGCPHYRRRCKIRAPCCDEILDCRHCHNEAKDSLHIEQHHRHE 346
Query: 489 LPRHEVQQVVCSL 527
LPRHEV +V+CSL
Sbjct: 347 LPRHEVSKVICSL 385
>gb|BP866007.1|BP866007 BP866007 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-76-D20 5',
mRNA sequence
Length = 391
Score = 131 bits (280), Expect = 3e-029
Identities = 47/73 (64%), Positives = 56/73 (76%)
Frame = +3 / +1
Query: 309 NGSNPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHE 488
N N + E G HYGC HYRRRC+IRAPCC+EIFDCRHCHNE K+S+ I++ RHE
Sbjct: 172 NEQNQEFANLMEMGSGHYGCSHYRRRCKIRAPCCDEIFDCRHCHNEAKDSLHIEQHHRHE 351
Query: 489 LPRHEVQQVVCSL 527
LPRHEV +V+CSL
Sbjct: 352 LPRHEVSKVICSL 390
>gb|BP861307.1|BP861307 BP861307 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-47-D07 5',
mRNA sequence
Length = 390
Score = 128 bits (275), Expect = 2e-028
Identities = 46/73 (63%), Positives = 56/73 (76%)
Frame = +3 / +1
Query: 309 NGSNPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHE 488
N N + E G HYGC HYRRRC+IRAPCC+EIFDCRHCHNE K+S+ I++ RHE
Sbjct: 172 NEQNQEFANLMEIGSGHYGCSHYRRRCKIRAPCCDEIFDCRHCHNEAKDSLHIEQHHRHE 351
Query: 489 LPRHEVQQVVCSL 527
LPRHEV +V+CS+
Sbjct: 352 LPRHEVSKVICSV 390
>gb|BP821006.1|BP821006 BP821006 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-56-H12 5',
mRNA sequence
Length = 389
Score = 86.3 bits (182), Expect(2) = 5e-028
Identities = 26/44 (59%), Positives = 37/44 (84%)
Frame = +3 / +1
Query: 333 EKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIK 464
++ G M +GC HY+RRC+IRAPCCNE+FDCRHCHNE+ ++++
Sbjct: 136 DRLHLGKMGFGCKHYKRRCQIRAPCCNEVFDCRHCHNESTSTLR 267
Score = 60.6 bits (126), Expect(2) = 5e-028
Identities = 22/36 (61%), Positives = 28/36 (77%)
Frame = +3 / +1
Query: 480 RHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGK 587
RH+L R +V+QV+CS+C TEQ QVC NCGV MG+
Sbjct: 280 RHDLVRQDVKQVICSVCDTEQPAAQVCSNCGVNMGE 387
>emb|AL163816.1|ATT20O10 Arabidopsis thaliana DNA chromosome 3, BAC clone T20O10
Length = 83122
Score = 69.3 bits (145), Expect(4) = 3e-027
Identities = 21/28 (75%), Positives = 25/28 (89%)
Frame = +3 / +2
Query: 366 CPHYRRRCRIRAPCCNEIFDCRHCHNET 449
C HY+RRC+IRAPCCN IF CRHCHN++
Sbjct: 13709 CEHYKRRCKIRAPCCNLIFSCRHCHNDS 13792
Score = 57.0 bits (118), Expect(4) = 3e-027
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = +3 / +2
Query: 546 VRQVCINCGVCMGKYFCGLCKLFDDDVS 629
V +VC NCGV MG+YFC +CK FDDDVS
Sbjct: 14138 VAKVCSNCGVNMGEYFCDICKFFDDDVS 14221
Score = 45.1 bits (92), Expect(4) = 3e-027
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +3 / +2
Query: 708 GCCYSIALKNSHACVEGAMHHDCPICFE 791
G CY + L++ H+C+E + + CP+C+E
Sbjct: 14834 GACYGMGLRDKHSCIENSTKNSCPVCYE 14917
Score = 32.2 bits (64), Expect(4) = 3e-027
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +3 / +2
Query: 510 QVVCSLCGTEQEVR 551
QVVCS+C TEQEVR
Sbjct: 14018 QVVCSICQTEQEVR 14059
>gb|BP868217.1|BP868217 BP868217 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-83-J17 5',
mRNA sequence
Length = 385
Score = 122 bits (262), Expect = 1e-026
Identities = 44/70 (62%), Positives = 53/70 (75%)
Frame = +3 / +2
Query: 309 NGSNPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHE 488
N N + E G HYGC HYRRRC+IRAPCC+EIFDCRHCHNE K+S+ I++ RHE
Sbjct: 170 NEQNQEFGNLMEMGSGHYGCSHYRRRCKIRAPCCDEIFDCRHCHNEAKDSLHIEQHHRHE 349
Query: 489 LPRHEVQQVV 518
LPRHEV +V+
Sbjct: 350 LPRHEVSKVI 379
>gb|T04243.1|T04243 290 Lambda-PRL2 Arabidopsis thaliana cDNA clone 34B5T7, mRNA
sequence
Length = 400
Score = 120 bits (256), Expect = 7e-026
Identities = 44/80 (55%), Positives = 53/80 (66%)
Frame = +3 / +3
Query: 309 NGSNPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHE 488
N N + E G HYGC HYRRRC+IRAPCC+EIFDCRHCH K S+ I++ RH
Sbjct: 159 NEQNQEFANLMEIGSXHYGCSHYRRRCKIRAPCCDEIFDCRHCHXAAKXSLHIEQHHRHX 338
Query: 489 LPRHEVQQVVCSLCGTEQEV 548
L RHEV + +CSLC +V
Sbjct: 339 LXRHEVSKXICSLCEXXXDV 398
>gb|BP849322.1|BP849322 BP849322 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-08-L05 5',
mRNA sequence
Length = 385
Score = 119 bits (255), Expect = 9e-026
Identities = 43/69 (62%), Positives = 52/69 (75%)
Frame = +3 / +2
Query: 309 NGSNPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHE 488
N N + E G HYGC HYRRRC+IRAPCC+EIFDCRHCHNE K+S+ +++ RHE
Sbjct: 179 NEQNQEFANLMEIGSGHYGCSHYRRRCKIRAPCCDEIFDCRHCHNEAKDSLHMEQHHRHE 358
Query: 489 LPRHEVQQV 515
LPRHEV +V
Sbjct: 359 LPRHEVSKV 385
>gb|BP852216.1|BP852216 BP852216 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-19-C05 5',
mRNA sequence
Length = 376
Score = 119 bits (254), Expect = 1e-025
Identities = 43/68 (63%), Positives = 51/68 (75%)
Frame = +3 / +3
Query: 309 NGSNPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHE 488
N N + E G HYGC HYRRRC+IRAPCC+EIFDCRHCHNE K+S+ I++ RHE
Sbjct: 171 NEQNQEFANLMEIGSGHYGCSHYRRRCKIRAPCCDEIFDCRHCHNEAKDSLHIEQHHRHE 350
Query: 489 LPRHEVQQ 512
LPRHEV +
Sbjct: 351 LPRHEVSK 374
>gb|BP841725.1|BP841725 BP841725 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-51-O18 5',
mRNA sequence
Length = 392
Score = 117 bits (251), Expect = 3e-025
Identities = 40/53 (75%), Positives = 48/53 (90%)
Frame = +3 / +3
Query: 372 HYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQVVCSLC 530
HYRRRC+IRAPCC+EIFDCRHCHNE K+S+ I++ RHELPRHEV +V+CSLC
Sbjct: 234 HYRRRCKIRAPCCDEIFDCRHCHNEAKDSLHIEQHHRHELPRHEVSKVICSLC 392
>gb|AV550477.1|AV550477 AV550477 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ113a05R 5', mRNA sequence
Length = 255
Score = 79.9 bits (168), Expect(2) = 5e-025
Identities = 25/38 (65%), Positives = 31/38 (81%)
Frame = +3 / +1
Query: 348 GIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSI 461
G +GC HY+RRC+IRAPCCN IF CRHCHN++ NS+
Sbjct: 37 GKFQFGCEHYKRRCKIRAPCCNLIFSCRHCHNDSANSL 150
Score = 56.5 bits (117), Expect(2) = 5e-025
Identities = 21/34 (61%), Positives = 26/34 (76%)
Frame = +3 / +1
Query: 468 DKMKRHELPRHEVQQVVCSLCGTEQEVRQVCINC 569
D +RH+L R V+QVVCS+C TEQEV +VC NC
Sbjct: 154 DPKERHDLVRQNVKQVVCSICQTEQEVAKVCSNC 255
>gb|BP861089.1|BP861089 BP861089 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-46-F13 5',
mRNA sequence
Length = 366
Score = 116 bits (249), Expect = 6e-025
Identities = 42/65 (64%), Positives = 49/65 (75%)
Frame = +3 / +2
Query: 309 NGSNPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHE 488
N N + E G HYGC HYRRRC+IRAPCC+EIFDCRHCHNE K+S+ I++ RHE
Sbjct: 170 NEQNQEFANLMEIGSGHYGCSHYRRRCKIRAPCCDEIFDCRHCHNEAKDSLHIEQHHRHE 349
Query: 489 LPRHE 503
LPRHE
Sbjct: 350 LPRHE 364
>gb|BP865031.1|BP865031 BP865031 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-72-K13 5',
mRNA sequence
Length = 387
Score = 116 bits (249), Expect = 6e-025
Identities = 43/68 (63%), Positives = 51/68 (75%)
Frame = +3 / +2
Query: 309 NGSNPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHE 488
N N + E G HYGC HYRRRC+IRAPC +EIFDCRHCHNE K+S+ I++ RHE
Sbjct: 173 NEQNQEFANLMEMGSGHYGCSHYRRRCKIRAPCGDEIFDCRHCHNEAKDSLHIEQHHRHE 352
Query: 489 LPRHEVQQ 512
LPRHEVQ+
Sbjct: 353 LPRHEVQR 376
>gb|T43488.1|T43488 6751 Lambda-PRL2 Arabidopsis thaliana cDNA clone 118P23T7, mRNA
sequence
Length = 483
Score = 113 bits (242), Expect = 6e-024
Identities = 36/68 (52%), Positives = 46/68 (67%)
Frame = +3 / +1
Query: 588 YFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXENFFHCSKCGCCYSIALKNSHACVEGAMH 767
YFC +C +DDD KQQ+HC+ ENFFHC KCG CY++ L+N+H CVE +M
Sbjct: 1 YFCSICIFYDDDTEKQQFHCDDCGICRVGGRENFFHCKKCGSCYAVGLRNNHRCVENSMR 180
Query: 768 HDCPICFE 791
H CPIC+E
Sbjct: 181 HHCPICYE 204
>gb|BP853213.1|BP853213 BP853213 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-22-I20 5',
mRNA sequence
Length = 376
Score = 112 bits (240), Expect = 1e-023
Identities = 42/71 (59%), Positives = 51/71 (71%)
Frame = +3 / +3
Query: 309 NGSNPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHE 488
N N + E G HYGC HYRRRC+IRAPC +EI D RHCHNE K+S+ I++ RHE
Sbjct: 162 NEQNQEFANLMEIGSGHYGCSHYRRRCKIRAPCGDEILDGRHCHNEAKDSLHIEQHHRHE 341
Query: 489 LPRHEVQQVVC 521
LPRHEV +V+C
Sbjct: 342 LPRHEVSKVIC 374
>gb|F14116.1|F14116 ATTS5038 Versailles-VB Arabidopsis thaliana cDNA clone VBVXG10,
mRNA sequence
Length = 410
Score = 88.6 bits (187), Expect(2) = 3e-023
Identities = 32/50 (64%), Positives = 36/50 (72%)
Frame = +3 / +1
Query: 309 NGSNPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNS 458
N N + E G HYG HYRRRC+IRAPCC+EIFDCRHCHNE K+S
Sbjct: 136 NEQNQEFXNLMEIGSGHYGFSHYRRRCKIRAPCCDEIFDCRHCHNEAKDS 285
Score = 42.3 bits (86), Expect(2) = 3e-023
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +3 / +2
Query: 465 IDKMKRHELPRHEVQQVVCSLC 530
I + RHELPRHEV +V+CSLC
Sbjct: 293 IXQHHRHELPRHEVSKVICSLC 358
>gb|BP847984.1|BP847984 BP847984 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-03-M23 5',
mRNA sequence
Length = 388
Score = 107 bits (228), Expect(2) = 4e-023
Identities = 37/50 (74%), Positives = 43/50 (86%)
Frame = +3 / +3
Query: 342 EKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHEL 491
E G HYGCPHYRRRC+IRAPCC+EIFDCRHCHNE K+S+ I++ RHEL
Sbjct: 204 EIGSGHYGCPHYRRRCKIRAPCCDEIFDCRHCHNEAKDSLHIEQHHRHEL 353
Score = 23.1 bits (44), Expect(2) = 4e-023
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +3 / +2
Query: 495 RHEVQQVVCSL 527
RHEV +V+CS+
Sbjct: 356 RHEVSKVICSV 388
>emb|AJ596108.1| Arabidopsis thaliana T-DNA flanking sequence, left border, clone
429B01, genomic survey sequence
Length = 876
Score = 72.5 bits (152), Expect(3) = 2e-021
Identities = 24/29 (82%), Positives = 24/29 (82%)
Frame = +3 / -2
Query: 366 CPHYRRRCRIRAPCCNEIFDCRHCHNETK 452
CPHYRRRC IRAPCCNEIF C HCH E K
Sbjct: 413 CPHYRRRCCIRAPCCNEIFGCHHCHYEAK 327
Score = 37.7 bits (76), Expect(3) = 2e-021
Identities = 11/22 (50%), Positives = 20/22 (90%)
Frame = +3 / -3
Query: 450 KNSIKIDKMKRHELPRHEVQQV 515
+N+I +D+ +RH++PRH+V+QV
Sbjct: 226 QNNINVDQKQRHDIPRHQVEQV 161
Score = 32.2 bits (64), Expect(3) = 2e-021
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +3 / -1
Query: 492 PRHEVQQVVCSLCGTEQEV 548
P QV+C LCGTEQEV
Sbjct: 96 PLSSSSQVICLLCGTEQEV 40
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,901,275,969
Number of Sequences: 1013581
Number of extensions: 30265103
Number of successful extensions: 207202
Number of sequences better than 1.0e-020: 55
length of database: 302,980,290
effective HSP length: 56
effective length of database: 246,219,754
effective search space used: 50967489078
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)