TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3191640.2.1
(923 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
emb|BX819999.1|CNS0AA2M Arabidopsis thaliana Full-length cD... 274 3e-072
ref|NM_128875.1| Arabidopsis thaliana polygalacturonase AT2... 273 7e-072
ref|NM_111662.2| Arabidopsis thaliana polygalacturonase AT3... 205 4e-066
dbj|AK117953.1| Arabidopsis thaliana At3g07830 mRNA for put... 205 4e-066
dbj|AK118684.1| Arabidopsis thaliana At5g48140 mRNA for put... 210 1e-065
ref|NM_124188.2| Arabidopsis thaliana polygalacturonase AT5... 210 1e-065
gb|BT009687.1| Arabidopsis thaliana At5g48140 mRNA, complet... 210 1e-065
gb|AY089015.1| Arabidopsis thaliana clone 16377 mRNA, compl... 209 2e-065
gb|AC002334.3| Arabidopsis thaliana chromosome 2 clone F25I... 193 3e-065
ref|NM_103464.1| Arabidopsis thaliana polygalacturonase AT1... 249 7e-065
ref|NM_103465.1| Arabidopsis thaliana polygalacturonase AT1... 249 7e-065
gb|DQ056483.1| Arabidopsis thaliana glycoside hydrolase fam... 249 1e-064
ref|NM_103463.1| Arabidopsis thaliana polygalacturonase AT1... 249 1e-064
ref|NM_111663.2| Arabidopsis thaliana polygalacturonase AT3... 200 2e-064
emb|X73222.1|ATEGP A.thaliana mRNA for exopolygalacturonase 169 1e-063
dbj|AB019229.1| Arabidopsis thaliana genomic DNA, chromosom... 169 1e-063
emb|AJ223189.1|ATAJ3189 Arabidopsis thaliana PGA2 gene 169 1e-063
gb|AY062447.1| Arabidopsis thaliana polygalacturonase; pect... 169 1e-063
ref|NM_112258.2| Arabidopsis thaliana polygalacturonase AT3... 169 1e-063
emb|BX823616.1|CNS0A4Y3 Arabidopsis thaliana Full-length cD... 169 1e-063
gb|AY114635.1| Arabidopsis thaliana polygalacturonase; pect... 169 1e-063
ref|NM_127105.1| Arabidopsis thaliana polygalacturonase AT2... 245 2e-063
ref|NM_127106.1| Arabidopsis thaliana polygalacturonase AT2... 245 2e-063
gb|AY056173.1| Arabidopsis thaliana putative exopolygalactu... 169 5e-063
ref|NM_111664.1| Arabidopsis thaliana polygalacturonase AT3... 169 5e-063
emb|X72292.1|ATEXOPB A.thaliana (clone GBGa483) mRNA for ex... 169 5e-063
gb|AY091200.1| Arabidopsis thaliana putative exopolygalactu... 169 5e-063
ref|NM_129589.1| Arabidopsis thaliana polygalacturonase AT2... 243 6e-063
dbj|AB023039.1| Arabidopsis thaliana genomic DNA, chromosom... 210 7e-063
gb|AY065239.1| Arabidopsis thaliana putative polygalacturon... 199 8e-063
ref|NM_111661.2| Arabidopsis thaliana polygalacturonase AT3... 199 8e-063
gb|AY087578.1| Arabidopsis thaliana clone 36765 mRNA, compl... 199 8e-063
gb|AY096534.1| Arabidopsis thaliana putative polygalacturon... 199 8e-063
emb|AJ005584.1|ATH005584 Arabidopsis thaliana mRNA for poly... 199 1e-062
ref|NM_117450.1| Arabidopsis thaliana polygalacturonase AT4... 242 1e-062
ref|NM_127107.2| Arabidopsis thaliana polygalacturonase AT2... 242 2e-062
gb|AC013483.7|ATAC013483 Arabidopsis thaliana chromosome II... 202 3e-062
emb|AJ003135.1|ATAJ3135 Arabidopsis thaliana PGA5 gene, com... 198 4e-062
emb|BX823174.1|CNS0A74O Arabidopsis thaliana Full-length cD... 199 4e-062
emb|BX822574.1|CNS0A73L Arabidopsis thaliana Full-length cD... 202 1e-061
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 177 1e-060
gb|AC007651.2| Arabidopsis thaliana chromosome I BAC F20D23... 177 1e-060
ref|NM_101576.1| Arabidopsis thaliana polygalacturonase AT1... 177 1e-060
ref|NM_128219.1| Arabidopsis thaliana polygalacturonase AT2... 193 4e-060
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 192 1e-059
gb|AC026757.12|AC026757 Arabidopsis thaliana chromosome 1 B... 192 2e-059
gb|AU238792.1|AU238792 AU238792 RAFL19 Arabidopsis thaliana... 205 2e-059
gb|BT005245.1| Arabidopsis thaliana At3g07830 mRNA, complet... 183 2e-059
gb|AC002505.3| Arabidopsis thaliana chromosome 2 clone T9J2... 193 3e-059
ref|NM_117928.1| Arabidopsis thaliana polygalacturonase AT4... 204 2e-058
gb|AC006248.4| Arabidopsis thaliana chromosome 2 clone F9O1... 192 4e-058
gb|AC006920.11| Arabidopsis thaliana chromosome 2 clone F26... 192 4e-058
gb|AF428425.1|AF428425 Arabidopsis thaliana At1g02790/T14P4... 159 5e-058
ref|NM_100158.1| Arabidopsis thaliana PGA4 (POLYGALACTURONA... 159 5e-058
gb|AY065210.1| Arabidopsis thaliana putative polygalacturon... 159 5e-058
emb|X72291.1|ATEXOPA A.thaliana (clone GBGe184) mRNA for ex... 159 5e-058
gb|AY133812.1| Arabidopsis thaliana clone U18487 putative p... 159 5e-058
gb|AF085279.1|AF085279 Arabidopsis thaliana ABA-regulated g... 188 9e-058
gb|AC007020.5| Arabidopsis thaliana chromosome 2 clone T3G2... 188 9e-058
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 192 2e-057
emb|AL161537.2|ATCHRIV37 Arabidopsis thaliana DNA chromosom... 192 2e-057
emb|AL035528.2|ATF18A5 Arabidopsis thaliana DNA chromosome ... 192 2e-057
gb|AC022521.4|AC022521 Arabidopsis thaliana chromosome I BA... 159 2e-056
gb|AC009525.3| Arabidopsis thaliana chromosome I BAC F22D16... 159 2e-056
emb|Y16230.1|ATPGA3GE Arabidopsis thaliana PGA3 gene 159 2e-056
emb|AX652128.1| Sequence 1979 from Patent WO03000898 165 1e-055
gb|AC013430.5|AC013430 Genomic sequence for Arabidopsis tha... 165 1e-055
ref|NM_106487.2| Arabidopsis thaliana polygalacturonase AT1... 165 3e-055
emb|AL161548.2|ATCHRIV48 Arabidopsis thaliana DNA chromosom... 106 8e-054
emb|AL021713.1|ATT9A21 Arabidopsis thaliana DNA chromosome ... 106 8e-054
emb|AL110123.1|ATF15J5 Arabidopsis thaliana DNA chromosome ... 106 9e-054
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 210 5e-053
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 210 5e-053
ref|NM_180028.1| Arabidopsis thaliana polygalacturonase AT2... 145 4e-052
emb|AX651722.1| Sequence 554 from Patent WO03000898 145 4e-052
gb|AY078936.1| Arabidopsis thaliana At2g41850/T11A7.5 mRNA,... 145 5e-051
ref|NM_106666.2| Arabidopsis thaliana polygalacturonase AT1... 134 2e-050
gb|AY046002.1| Arabidopsis thaliana putative polygalacturon... 134 2e-050
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 202 2e-050
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 202 2e-050
gb|AY142668.1| Arabidopsis thaliana putative polygalacturon... 134 2e-050
emb|AX507825.1| Sequence 2520 from Patent WO0216655 136 1e-049
ref|NM_100446.1| Arabidopsis thaliana polygalacturonase AT1... 136 1e-049
ref|NM_115611.2| Arabidopsis thaliana ADPG1; polygalacturon... 133 2e-049
dbj|AK117942.1| Arabidopsis thaliana At3g57510 mRNA for put... 133 2e-049
emb|AX412563.1| Sequence 327 from Patent WO0222675 133 2e-049
gb|BT005376.1| Arabidopsis thaliana At3g57510 mRNA, complet... 133 2e-049
emb|AX651724.1| Sequence 557 from Patent WO03000898 133 2e-049
ref|NM_115848.3| Arabidopsis thaliana polygalacturonase AT3... 149 4e-049
emb|BX823105.1|CNS0A4UN Arabidopsis thaliana Full-length cD... 149 4e-049
gb|BT015766.1| Arabidopsis thaliana At3g59850 mRNA, complet... 149 4e-049
gb|BT020180.1| Arabidopsis thaliana At3g59850 mRNA, complet... 149 4e-049
ref|NM_111676.3| Arabidopsis thaliana polygalacturonase AT3... 140 5e-049
ref|NM_100445.1| Arabidopsis thaliana polygalacturonase AT1... 131 1e-048
emb|BX824927.1|CNS0A4TY Arabidopsis thaliana Full-length cD... 149 1e-048
emb|AL772721.1| Arabidopsis thaliana transposon insertion S... 195 1e-048
gb|AC002333.3| Arabidopsis thaliana chromosome 2 clone F18O... 117 1e-048
gb|BX836604.1|BX836604 BX836604 Arabidopsis thaliana Flower... 87 2e-048
emb|BX813348.1|CNS0AE3X Arabidopsis thaliana Full-length cD... 130 2e-048
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 193 7e-048
ref|NM_129950.1| Arabidopsis thaliana polygalacturonase AT2... 140 2e-047
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 192 2e-047
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 192 2e-047
ref|NM_105231.1| Arabidopsis thaliana polygalacturonase AT1... 152 4e-047
emb|BX822380.1|CNS0A76T Arabidopsis thaliana Full-length cD... 149 8e-047
ref|NM_102195.1| Arabidopsis thaliana polygalacturonase AT1... 131 2e-045
emb|BX825672.1|CNS0A7UV Arabidopsis thaliana Full-length cD... 124 2e-045
gb|DQ056577.1| Arabidopsis thaliana putative polygalacturon... 156 1e-044
ref|NM_129948.1| Arabidopsis thaliana polygalacturonase AT2... 156 1e-044
emb|BX822956.1|CNS0A7SM Arabidopsis thaliana Full-length cD... 94 5e-044
gb|AC009322.1|AC009322 Arabidopsis thaliana chromosome I BA... 68 7e-044
ref|NM_112442.1| Arabidopsis thaliana polygalacturonase AT3... 130 1e-043
ref|NM_104548.2| Arabidopsis thaliana polygalacturonase AT1... 144 1e-043
emb|BX816284.1|CNS0AD4M Arabidopsis thaliana Full-length cD... 144 1e-043
gb|AY089177.1| Arabidopsis thaliana clone 6 mRNA, complete ... 128 3e-043
gb|AC004005.3| Arabidopsis thaliana chromosome 2 clone F6E1... 101 4e-043
ref|NM_123354.1| Arabidopsis thaliana polygalacturonase AT5... 155 6e-043
emb|AX651258.1| Sequence 42 from Patent WO03000898 148 6e-043
ref|NM_129949.1| Arabidopsis thaliana polygalacturonase AT2... 148 6e-043
ref|NM_148391.1| Arabidopsis thaliana polygalacturonase AT4... 157 1e-042
emb|BX813953.1|CNS0AEHM Arabidopsis thaliana Full-length cD... 133 3e-042
gb|AC001229.1|F5I14 Sequence of BAC F5I14 from Arabidopsis ... 152 3e-041
dbj|AK117620.1| Arabidopsis thaliana At3g26610 mRNA for put... 136 7e-041
ref|NM_113570.2| Arabidopsis thaliana polygalacturonase AT3... 136 7e-041
emb|X97828.1|ATORF06 A.thaliana mRNA (orf06) from chromosom... 136 7e-041
gb|BT005780.1| Arabidopsis thaliana clone RAFL14-98-K19 (R2... 135 1e-040
ref|NM_121469.3| Arabidopsis thaliana polygalacturonase AT5... 135 1e-040
emb|BX813651.1|CNS0AEBF Arabidopsis thaliana Full-length cD... 131 1e-040
emb|BX831614.1|CNS09YP6 Arabidopsis thaliana Full-length cD... 135 1e-040
emb|AX461137.1| Sequence 66 from Patent WO0198480 65 1e-040
emb|AX461255.1| Sequence 184 from Patent WO0198480 65 1e-040
ref|NM_119732.2| Arabidopsis thaliana polygalacturonase AT4... 135 2e-040
ref|NM_100127.2| Arabidopsis thaliana polygalacturonase AT1... 100 3e-040
gb|BT023462.1| Arabidopsis thaliana At1g02460 gene, complet... 100 3e-040
gb|DQ056578.1| Arabidopsis thaliana putative polygalacturon... 135 4e-040
ref|NM_129951.1| Arabidopsis thaliana polygalacturonase AT2... 135 4e-040
emb|BX821033.1|CNS0AACW Arabidopsis thaliana Full-length cD... 108 9e-040
gb|AI994651.1|AI994651 701499138 A. thaliana, Ohio State cl... 122 1e-039
emb|BX814380.1|CNS0AC2P Arabidopsis thaliana Full-length cD... 136 2e-039
ref|NM_103706.2| Arabidopsis thaliana polygalacturonase AT1... 136 3e-039
gb|AF410319.1|AF410319 Arabidopsis thaliana At1g48100/F21D1... 136 3e-039
gb|AY050798.1| Arabidopsis thaliana putative polygalacturon... 136 3e-039
gb|AY096360.1| Arabidopsis thaliana putative polygalacturon... 136 3e-039
emb|BX815901.1|CNS0AEH8 Arabidopsis thaliana Full-length cD... 93 6e-039
gb|AF037367.1| Arabidopsis thaliana endo-polygalacturonase ... 70 1e-038
emb|AJ002532.1|ATAJ2532 Arabidopsis thaliana ADPG1 gene 70 4e-038
emb|BX824469.1|CNS0A6Z5 Arabidopsis thaliana Full-length cD... 132 4e-038
ref|NM_116419.2| Arabidopsis thaliana polygalacturonase AT4... 95 5e-038
ref|NM_104742.3| Arabidopsis thaliana polygalacturonase AT1... 142 2e-037
emb|BX814728.1|CNS0AAT1 Arabidopsis thaliana Full-length cD... 142 2e-037
gb|AY060568.1| Arabidopsis thaliana At1g60590/F8A5_12 mRNA,... 142 2e-037
gb|BT000611.1| Arabidopsis thaliana putative polygalacturon... 142 2e-037
emb|BX816708.1|CNS0AD6H Arabidopsis thaliana Full-length cD... 125 2e-037
ref|NM_123851.1| Arabidopsis thaliana polygalacturonase AT5... 130 3e-037
emb|AL138647.1|ATF24G16 Arabidopsis thaliana DNA chromosome... 114 4e-037
ref|NM_105718.1| Arabidopsis thaliana polygalacturonase AT1... 127 4e-037
gb|AC007153.2| Arabidopsis thaliana chromosome I BAC F3F20 ... 104 5e-037
gb|AC010796.7|AC010796 Arabidopsis thaliana chromosome 1 BA... 57 7e-037
ref|NM_123852.1| Arabidopsis thaliana polygalacturonase AT5... 126 1e-035
gb|CK118633.1|CK118633 216g11.p1 AtM1 Arabidopsis thaliana ... 152 2e-035
ref|NM_122635.2| Arabidopsis thaliana polygalacturonase AT5... 135 7e-035
dbj|AB010077.1| Arabidopsis thaliana genomic DNA, chromosom... 64 1e-034
gb|AC002339.3| Arabidopsis thaliana chromosome 2 clone T11A... 65 2e-034
ref|NM_106663.1| Arabidopsis thaliana polygalacturonase AT1... 119 2e-034
gb|AC002292.1|AC002292 Arabidopsis thaliana BAC F8A5, compl... 89 7e-034
emb|AL133248.1|ATT8H10 Arabidopsis thaliana DNA chromosome ... 70 2e-033
gb|AW004489.1|AW004489 701931827 A. thaliana, mixed source ... 121 5e-033
ref|NM_121726.1| Arabidopsis thaliana polygalacturonase AT5... 132 4e-032
gb|AV782140.1|AV782140 AV782140 RAFL4 Arabidopsis thaliana ... 72 8e-032
gb|B28793.1|B28793 T19O12TR TAMU Arabidopsis thaliana genom... 90 1e-030
gb|AY039852.1| Arabidopsis thaliana At1g10640/F20B24_8 mRNA... 134 4e-030
gb|AY143959.1| Arabidopsis thaliana At1g10640/F20B24_8 mRNA... 134 4e-030
emb|CQ805350.1| Sequence 1761 from Patent WO2004035798 134 4e-030
ref|NM_100940.3| Arabidopsis thaliana polygalacturonase AT1... 134 4e-030
gb|AC007945.3|AC007945 Genomic sequence for Arabidopsis tha... 58 5e-029
gb|AC005990.1|F5O8 Arabidopsis thaliana chromosome 1 BAC F5... 58 1e-028
emb|AL163792.1|ATT15N1 Arabidopsis thaliana DNA chromosome ... 92 6e-028
gb|AQ964056.1|AQ964056 LERGU38TF LERG Arabidopsis thaliana ... 100 2e-027
gb|AQ964057.1|AQ964057 LERGU38TR LERG Arabidopsis thaliana ... 100 2e-027
gb|AI995224.1|AI995224 701502760 A. thaliana, Ohio State cl... 123 9e-027
gb|B09328.1|B09328 F2P23-T7 IGF Arabidopsis thaliana genomi... 87 1e-026
gb|AC009323.4|AC009323 Arabidopsis thaliana chromosome I BA... 67 2e-026
ref|NM_119390.2| Arabidopsis thaliana polygalacturonase AT4... 122 2e-026
gb|B12788.1|B12788 F7K19-T7 IGF Arabidopsis thaliana genomi... 77 4e-026
gb|AC009398.6|AC009398 Genomic sequence for Arabidopsis tha... 87 5e-026
gb|AC064879.3|AC064879 Arabidopsis thaliana chromosome I BA... 59 2e-025
gb|AI993509.1|AI993509 701496530 A. thaliana, Ohio State cl... 91 2e-025
gb|AQ961164.1|AQ961164 LERFJ55TF LERA Arabidopsis thaliana ... 51 3e-025
dbj|AB017071.1| Arabidopsis thaliana genomic DNA, chromosom... 57 3e-025
emb|AJ552539.1|ATH552539 Arabidopsis thaliana T-DNA flankin... 75 3e-025
gb|CL504361.1|CL504361 SAIL_736_A05.v1 SAIL Collection Arab... 70 4e-025
emb|BX813497.1|CNS0ADHO Arabidopsis thaliana Full-length cD... 100 6e-025
gb|AC023673.3|AC023673 Genomic sequence for Arabidopsis tha... 57 6e-025
dbj|AB005238.1| Arabidopsis thaliana genomic DNA, chromosom... 92 3e-024
emb|X98130.1|AT81KBGEN Arabidopsis thaliana 81kb genomic se... 58 4e-024
dbj|AB028611.1| Arabidopsis thaliana genomic DNA, chromosom... 58 4e-024
gb|BH792479.1|BH792479 SALK_064312.54.50.x Arabidopsis thal... 114 5e-024
gb|BZ666496.1|BZ666496 SGT6366-3-3 Arabidopsis thaliana Ds ... 114 5e-024
emb|CR357101.1| Arabidopsis thaliana T-DNA flanking sequenc... 114 5e-024
gb|B78058.1|B78058 T30C17TR TAMU Arabidopsis thaliana genom... 73 8e-024
gb|AC007138.1| Arabidopsis thaliana BAC T7B11 from chromoso... 52 2e-023
emb|AL034567.1|ATF8B4 Arabidopsis thaliana DNA chromosome 4... 58 5e-023
gb|AQ010492.1|AQ010492 F23M1TFB IGF Arabidopsis thaliana ge... 110 9e-023
gb|R29820.1|R29820 12425 Lambda-PRL2 Arabidopsis thaliana c... 110 9e-023
gb|BP815552.1|BP815552 BP815552 RAFL19 Arabidopsis thaliana... 110 9e-023
emb|AL161493.2|ATCHRIV5 Arabidopsis thaliana DNA chromosome... 52 1e-022
emb|AL031135.1|ATF8D20 Arabidopsis thaliana DNA chromosome ... 58 1e-022
gb|CW800882.1|CW800882 WiscDsLox289_292L7 Arabidopsis thali... 59 2e-022
gb|B09652.1|B09652 T25H4-T7 TAMU Arabidopsis thaliana genom... 53 3e-022
emb|BX894310.1| Arabidopsis thaliana T-DNA flanking sequenc... 86 3e-022
emb|AL161581.2|ATCHRIV77 Arabidopsis thaliana DNA chromosom... 58 8e-022
emb|AL161587.2|ATCHRIV83 Arabidopsis thaliana DNA chromosom... 58 2e-021
gb|BH613065.1|BH613065 SALK_033719 Arabidopsis thaliana TDN... 105 2e-021
gb|BH613074.1|BH613074 SALK_033729 Arabidopsis thaliana TDN... 105 2e-021
dbj|AB016874.1| Arabidopsis thaliana genomic DNA, chromosom... 57 3e-021
gb|AV532721.1|AV532721 AV532721 Arabidopsis thaliana flower... 64 3e-021
gb|AC002342.1|ATAC002342 Arabidopsis thaliana chromosome V ... 57 3e-021
emb|AJ270058.1| Arabidopsis thaliana DNA chromosome 4, shor... 51 5e-021
>emb|BX819999.1|CNS0AA2M Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS59ZH05 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1532
Score = 274 bits (593), Expect = 3e-072
Identities = 107/243 (44%), Positives = 164/243 (67%)
Frame = +1 / +2
Query: 19 ISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIGTGD 198
I+G++ +NSK H N+ + +D + V IT P D NTDG+ +G SS+++I N TIGTGD
Sbjct: 515 INGLRSINSKMGHFNLFSVEDFDITGVTITTPGDSPNTDGIKIGKSSHMQIYNVTIGTGD 694
Query: 199 DCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVRIKS 378
DC++I G+ + ++++ CGPG GISVG LGRYK+EK+V +TVR+ ++ TT+G+RIK+
Sbjct: 695 DCIAILDGTSNLDISDVRCGPGHGISVGSLGRYKEEKNVQGLTVRNSIINGTTDGLRIKT 874
Query: 379 YEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVCPGKRSNSSHVSIKDVTFRNIS 558
+ + S ++ S+ +ENI+M V NPI+IDQ +CP C +SHV IKDV + NI
Sbjct: 875 WAKSVSQISVSNFLYENIQMINVGNPIVIDQQYCPHGQCDSPGKYASHVQIKDVKYNNIW 1054
Query: 559 GTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNAKGTAKGSLQALDCLV 738
GTS++ EA+ + CS+T PC V L ++N+ Y G++ A+C N G+ +G + +C V
Sbjct: 1055 GTSTSKEALKMQCSKTFPCQDVELSNINLHYVGRDGLVTALCENVGGSIRGKIVPANCRV 1234
Query: 739 *SM 747
*S+
Sbjct: 1235 *SL 1243
>ref|NM_128875.1| Arabidopsis thaliana polygalacturonase AT2G33160 mRNA, complete cds
Length = 1995
Score = 273 bits (590), Expect = 7e-072
Identities = 105/240 (43%), Positives = 162/240 (67%)
Frame = +1 / +1
Query: 19 ISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIGTGD 198
I+G++ +NSK H N+ + +D + V ITAP D NTDG+ +G SS+++I N TIGTGD
Sbjct: 493 INGLRSINSKMGHFNLFSVEDFNITGVTITAPGDSPNTDGIKIGKSSHMQIYNVTIGTGD 672
Query: 199 DCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVRIKS 378
DC++I G+ + ++++ CGPG GISVG LGRYK+EK+V +TVR+ ++ TT+G+RIK+
Sbjct: 673 DCIAILDGTSNLDISDVRCGPGHGISVGSLGRYKEEKNVQGLTVRNSIINGTTDGLRIKT 852
Query: 379 YEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVCPGKRSNSSHVSIKDVTFRNIS 558
+ + S ++ S+ +ENI+M V NPI+IDQ +CP C +SHV IKDV + NI
Sbjct: 853 WAKSVSQISVSNFLYENIQMINVGNPIVIDQQYCPHGQCDSPGKYASHVQIKDVKYNNIW 1032
Query: 559 GTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNAKGTAKGSLQALDCLV 738
GTS++ EA+ + CS+T PC V L ++N+ Y G++ A+C N G+ +G + +C +
Sbjct: 1033 GTSTSKEALKMQCSKTFPCQDVELSNINLHYVGRDGLVTALCENVGGSIRGKIVPANCRI 1212
>ref|NM_111662.2| Arabidopsis thaliana polygalacturonase AT3G07830 mRNA, complete cds
Length = 1460
Score = 205 bits (443), Expect(2) = 4e-066
Identities = 85/170 (50%), Positives = 116/170 (68%)
Frame = +1 / +2
Query: 7 TNGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTI 186
TN I I +++K FHIN+ +K++T +V I APA+ NTDG+H+G S V I NS I
Sbjct: 497 TNAEIRDISSIDAKNFHINVIGAKNMTFDNVKIMAPAESPNTDGIHLGRSVGVSIINSRI 676
Query: 187 GTGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGV 366
TGDDCVS+G G ++V N+ CGPG GISVG LGRY E+DVS + V +C L+ T NG+
Sbjct: 677 STGDDCVSVGDGMVNLLVKNVVCGPGHGISVGSLGRYGHEQDVSGIRVINCTLQETDNGL 856
Query: 367 RIKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVCPGKRSNS 516
RIK++ A TAS++ FENI + V+NPI+IDQ +CP C ++S+S
Sbjct: 857 RIKTWPSAACSTTASNIHFENIILRNVSNPILIDQEYCPWNQCNKQKSSS 1006
Score = 114 bits (244), Expect(2) = 5e-026
Identities = 61/148 (41%), Positives = 75/148 (50%)
Frame = -1 / -3
Query: 488 FWGQKYWSMMMGLATSSILMFSKVRWDAVSTDSASSYDLMRTPLVVFLSTQXXXXXXXXX 309
F GQ WSM +GL T ++FSK +AV +A L+ PL V Q
Sbjct: 978 FQGQYSWSMRIGLLTFLRMIFSK*ILEAVVEQAAEGQVLILRPLSVSWRVQLMTLMPLTS 799
Query: 308 XXXXXRPRQPTLMPCPGPQVMLFTMTPSLPGPMETQSSPVPMVELVMRTLEDPPTWTPSV 129
PR PTL+PCPGP T ++P P ETQSSPV ++EL+M T P W PSV
Sbjct: 798 CSCPYLPRLPTLIPCPGPHTTFLTRRFTIPSPTETQSSPVEILELIMETPTLLPKWIPSV 619
Query: 128 FSTSAGAVMFTSFTVMSLEVSMLMWKNL 45
SAGA++ T VM L LM K L
Sbjct: 618 LGLSAGAMILTLSKVMFLAPITLM*KFL 535
Score = 68.9 bits (144), Expect(2) = 4e-066
Identities = 25/70 (35%), Positives = 41/70 (58%)
Frame = +1 / +2
Query: 505 RSNSSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVC 684
+ SS + + +++FR I GTS +AV LLCS+ PC V + D+N++Y G + +C
Sbjct: 989 KQKSSSIKLANISFRRIRGTSGNKDAVKLLCSKGYPCENVQVGDINIQYTGADGPATFMC 1168
Query: 685 SNAKGTAKGS 714
SN + G+
Sbjct: 1169 SNVRPKLVGT 1198
Score = 25.8 bits (50), Expect(2) = 5e-026
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = -1 / -3
Query: 713 LPLAVPLALLHTAMVLLFLPAYSTLTSMSETPLHGCVSEQSRLTASGVDDVPEMLRKV 540
+P ++ L H + P Y L S + T HG + TAS DVP +L K+
Sbjct: 1197 VPTSLGLTFEHMKVAGPSAPVY*ILMSPT*TFSHGYPLLHNSFTASLFPDVPLILLKL 1024
>dbj|AK117953.1| Arabidopsis thaliana At3g07830 mRNA for putative polygalacturonase,
complete cds, clone: RAFL19-14-E02
Length = 989
Score = 205 bits (443), Expect(2) = 4e-066
Identities = 85/170 (50%), Positives = 116/170 (68%)
Frame = +1 / +2
Query: 7 TNGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTI 186
TN I I +++K FHIN+ +K++T +V I APA+ NTDG+H+G S V I NS I
Sbjct: 14 TNAEIRDISSIDAKNFHINVIGAKNMTFDNVKIMAPAESPNTDGIHLGRSVGVSIINSRI 193
Query: 187 GTGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGV 366
TGDDCVS+G G ++V N+ CGPG GISVG LGRY E+DVS + V +C L+ T NG+
Sbjct: 194 STGDDCVSVGDGMVNLLVKNVVCGPGHGISVGSLGRYGHEQDVSGIRVINCTLQETDNGL 373
Query: 367 RIKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVCPGKRSNS 516
RIK++ A TAS++ FENI + V+NPI+IDQ +CP C ++S+S
Sbjct: 374 RIKTWPSAACSTTASNIHFENIILRNVSNPILIDQEYCPWNQCNKQKSSS 523
Score = 114 bits (244), Expect(2) = 5e-026
Identities = 61/148 (41%), Positives = 75/148 (50%)
Frame = -1 / -3
Query: 488 FWGQKYWSMMMGLATSSILMFSKVRWDAVSTDSASSYDLMRTPLVVFLSTQXXXXXXXXX 309
F GQ WSM +GL T ++FSK +AV +A L+ PL V Q
Sbjct: 495 FQGQYSWSMRIGLLTFLRMIFSK*ILEAVVEQAAEGQVLILRPLSVSWRVQLMTLMPLTS 316
Query: 308 XXXXXRPRQPTLMPCPGPQVMLFTMTPSLPGPMETQSSPVPMVELVMRTLEDPPTWTPSV 129
PR PTL+PCPGP T ++P P ETQSSPV ++EL+M T P W PSV
Sbjct: 315 CSCPYLPRLPTLIPCPGPHTTFLTRRFTIPSPTETQSSPVEILELIMETPTLLPKWIPSV 136
Query: 128 FSTSAGAVMFTSFTVMSLEVSMLMWKNL 45
SAGA++ T VM L LM K L
Sbjct: 135 LGLSAGAMILTLSKVMFLAPITLM*KFL 52
Score = 68.9 bits (144), Expect(2) = 4e-066
Identities = 25/70 (35%), Positives = 41/70 (58%)
Frame = +1 / +2
Query: 505 RSNSSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVC 684
+ SS + + +++FR I GTS +AV LLCS+ PC V + D+N++Y G + +C
Sbjct: 506 KQKSSSIKLANISFRRIRGTSGNKDAVKLLCSKGYPCENVQVGDINIQYTGADGPATFMC 685
Query: 685 SNAKGTAKGS 714
SN + G+
Sbjct: 686 SNVRPKLVGT 715
Score = 25.8 bits (50), Expect(2) = 5e-026
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = -1 / -3
Query: 713 LPLAVPLALLHTAMVLLFLPAYSTLTSMSETPLHGCVSEQSRLTASGVDDVPEMLRKV 540
+P ++ L H + P Y L S + T HG + TAS DVP +L K+
Sbjct: 714 VPTSLGLTFEHMKVAGPSAPVY*ILMSPT*TFSHGYPLLHNSFTASLFPDVPLILLKL 541
>dbj|AK118684.1| Arabidopsis thaliana At5g48140 mRNA for putative polygalacturonase,
complete cds, clone: RAFL19-95-F20
Length = 1466
Score = 210 bits (453), Expect(2) = 1e-065
Identities = 82/163 (50%), Positives = 114/163 (69%)
Frame = +1 / +1
Query: 7 TNGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTI 186
T+ I GI L++K FHIN+ +K++T +DV I APA+ NTDG+HVG S ++I NS I
Sbjct: 553 TDAKIRGITSLDAKHFHINVIGAKNVTFEDVKIIAPAESPNTDGIHVGRSDGIKIINSFI 732
Query: 187 GTGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGV 366
TGDDCVS+G G ++V +TCGPG GIS+G LGRY E++VS + + +C L+ T NG+
Sbjct: 733 STGDDCVSVGDGMKNLLVERVTCGPGHGISIGSLGRYSHEENVSGIKIINCTLQETDNGL 912
Query: 367 RIKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
RIK++ A TAS + FENI ++ V+NPI+IDQ +CP C
Sbjct: 913 RIKTWPSAACTTTASDIHFENILLKNVSNPILIDQEYCPWNQC 1041
Score = 120 bits (256), Expect(2) = 5e-027
Identities = 65/162 (40%), Positives = 79/162 (48%)
Frame = -1 / -1
Query: 488 FWGQKYWSMMMGLATSSILMFSKVRWDAVSTDSASSYDLMRTPLVVFLSTQXXXXXXXXX 309
F GQ WSM MGL T MFSK +AV +A + L+ PL V Q
Sbjct: 1034 FHGQYSWSMRMGLLTFLRRMFSKWISEAVVVQAAEGHVLILRPLSVSWRVQLMILMPLTF 855
Query: 308 XXXXXRPRQPTLMPCPGPQVMLFTMTPSLPGPMETQSSPVPMVELVMRTLEDPPTWTPSV 129
PR P L+PCPGP V L T +P P ETQSSPV + EL++ PTW PSV
Sbjct: 854 SSWLYLPRLPILIPCPGPHVTLSTRRFFIPSPTETQSSPVEINELMILIPSLLPTWIPSV 675
Query: 128 FSTSAGAVMFTSFTVMSLEVSMLMWKNLELSSLIPEIVPLVS 3
SAGA++ TS V LMWK ++P I V+
Sbjct: 674 LGLSAGAMILTSSNVTFFAPMTLMWKCFASKEVMPLIFASVT 549
Score = 62.9 bits (131), Expect(2) = 1e-065
Identities = 24/70 (34%), Positives = 38/70 (54%)
Frame = +1 / +1
Query: 505 RSNSSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVC 684
+ S + + +++F+ I GTS +AV LLCS+ PC V + DVN++Y G + C
Sbjct: 1045 KQKPSTIKLANISFKKIRGTSGNKDAVKLLCSKGYPCQNVEVGDVNIQYTGADGPATFQC 1224
Query: 685 SNAKGTAKGS 714
SN G+
Sbjct: 1225 SNVSPKLVGT 1254
Score = 23.5 bits (45), Expect(2) = 5e-027
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = -1 / -1
Query: 656 PAYSTLTSMSETPLHGCVSEQSRLTASGVDDVPEMLRKV 540
P Y TS + T HG TAS DVP + K+
Sbjct: 1196 PVYWMFTSPTSTF*HGYPLLHKSFTASLFPDVPLIFLKL 1080
>ref|NM_124188.2| Arabidopsis thaliana polygalacturonase AT5G48140 mRNA, complete cds
Length = 1439
Score = 210 bits (453), Expect(2) = 1e-065
Identities = 82/163 (50%), Positives = 114/163 (69%)
Frame = +1 / +1
Query: 7 TNGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTI 186
T+ I GI L++K FHIN+ +K++T +DV I APA+ NTDG+HVG S ++I NS I
Sbjct: 553 TDAKIRGITSLDAKHFHINVIGAKNVTFEDVKIIAPAESPNTDGIHVGRSDGIKIINSFI 732
Query: 187 GTGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGV 366
TGDDCVS+G G ++V +TCGPG GIS+G LGRY E++VS + + +C L+ T NG+
Sbjct: 733 STGDDCVSVGDGMKNLLVERVTCGPGHGISIGSLGRYSHEENVSGIKIINCTLQETDNGL 912
Query: 367 RIKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
RIK++ A TAS + FENI ++ V+NPI+IDQ +CP C
Sbjct: 913 RIKTWPSAACTTTASDIHFENILLKNVSNPILIDQEYCPWNQC 1041
Score = 120 bits (256), Expect(2) = 5e-027
Identities = 65/162 (40%), Positives = 79/162 (48%)
Frame = -1 / -1
Query: 488 FWGQKYWSMMMGLATSSILMFSKVRWDAVSTDSASSYDLMRTPLVVFLSTQXXXXXXXXX 309
F GQ WSM MGL T MFSK +AV +A + L+ PL V Q
Sbjct: 1034 FHGQYSWSMRMGLLTFLRRMFSKWISEAVVVQAAEGHVLILRPLSVSWRVQLMILMPLTF 855
Query: 308 XXXXXRPRQPTLMPCPGPQVMLFTMTPSLPGPMETQSSPVPMVELVMRTLEDPPTWTPSV 129
PR P L+PCPGP V L T +P P ETQSSPV + EL++ PTW PSV
Sbjct: 854 SSWLYLPRLPILIPCPGPHVTLSTRRFFIPSPTETQSSPVEINELMILIPSLLPTWIPSV 675
Query: 128 FSTSAGAVMFTSFTVMSLEVSMLMWKNLELSSLIPEIVPLVS 3
SAGA++ TS V LMWK ++P I V+
Sbjct: 674 LGLSAGAMILTSSNVTFFAPMTLMWKCFASKEVMPLIFASVT 549
Score = 62.9 bits (131), Expect(2) = 1e-065
Identities = 24/70 (34%), Positives = 38/70 (54%)
Frame = +1 / +1
Query: 505 RSNSSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVC 684
+ S + + +++F+ I GTS +AV LLCS+ PC V + DVN++Y G + C
Sbjct: 1045 KQKPSTIKLANISFKKIRGTSGNKDAVKLLCSKGYPCQNVEVGDVNIQYTGADGPATFQC 1224
Query: 685 SNAKGTAKGS 714
SN G+
Sbjct: 1225 SNVSPKLVGT 1254
Score = 23.5 bits (45), Expect(2) = 5e-027
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = -1 / -1
Query: 656 PAYSTLTSMSETPLHGCVSEQSRLTASGVDDVPEMLRKV 540
P Y TS + T HG TAS DVP + K+
Sbjct: 1196 PVYWMFTSPTSTF*HGYPLLHKSFTASLFPDVPLIFLKL 1080
>gb|BT009687.1| Arabidopsis thaliana At5g48140 mRNA, complete cds
Length = 1188
Score = 210 bits (453), Expect(2) = 1e-065
Identities = 82/163 (50%), Positives = 114/163 (69%)
Frame = +1 / +1
Query: 7 TNGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTI 186
T+ I GI L++K FHIN+ +K++T +DV I APA+ NTDG+HVG S ++I NS I
Sbjct: 439 TDAKIRGITSLDAKHFHINVIGAKNVTFEDVKIIAPAESPNTDGIHVGRSDGIKIINSFI 618
Query: 187 GTGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGV 366
TGDDCVS+G G ++V +TCGPG GIS+G LGRY E++VS + + +C L+ T NG+
Sbjct: 619 STGDDCVSVGDGMKNLLVERVTCGPGHGISIGSLGRYSHEENVSGIKIINCTLQETDNGL 798
Query: 367 RIKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
RIK++ A TAS + FENI ++ V+NPI+IDQ +CP C
Sbjct: 799 RIKTWPSAACTTTASDIHFENILLKNVSNPILIDQEYCPWNQC 927
Score = 120 bits (256), Expect(2) = 5e-027
Identities = 65/162 (40%), Positives = 79/162 (48%)
Frame = -1 / -2
Query: 488 FWGQKYWSMMMGLATSSILMFSKVRWDAVSTDSASSYDLMRTPLVVFLSTQXXXXXXXXX 309
F GQ WSM MGL T MFSK +AV +A + L+ PL V Q
Sbjct: 920 FHGQYSWSMRMGLLTFLRRMFSKWISEAVVVQAAEGHVLILRPLSVSWRVQLMILMPLTF 741
Query: 308 XXXXXRPRQPTLMPCPGPQVMLFTMTPSLPGPMETQSSPVPMVELVMRTLEDPPTWTPSV 129
PR P L+PCPGP V L T +P P ETQSSPV + EL++ PTW PSV
Sbjct: 740 SSWLYLPRLPILIPCPGPHVTLSTRRFFIPSPTETQSSPVEINELMILIPSLLPTWIPSV 561
Query: 128 FSTSAGAVMFTSFTVMSLEVSMLMWKNLELSSLIPEIVPLVS 3
SAGA++ TS V LMWK ++P I V+
Sbjct: 560 LGLSAGAMILTSSNVTFFAPMTLMWKCFASKEVMPLIFASVT 435
Score = 62.9 bits (131), Expect(2) = 1e-065
Identities = 24/70 (34%), Positives = 38/70 (54%)
Frame = +1 / +1
Query: 505 RSNSSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVC 684
+ S + + +++F+ I GTS +AV LLCS+ PC V + DVN++Y G + C
Sbjct: 931 KQKPSTIKLANISFKKIRGTSGNKDAVKLLCSKGYPCQNVEVGDVNIQYTGADGPATFQC 1110
Query: 685 SNAKGTAKGS 714
SN G+
Sbjct: 1111 SNVSPKLVGT 1140
Score = 23.5 bits (45), Expect(2) = 5e-027
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = -1 / -2
Query: 656 PAYSTLTSMSETPLHGCVSEQSRLTASGVDDVPEMLRKV 540
P Y TS + T HG TAS DVP + K+
Sbjct: 1082 PVYWMFTSPTSTF*HGYPLLHKSFTASLFPDVPLIFLKL 966
>gb|AY089015.1| Arabidopsis thaliana clone 16377 mRNA, complete sequence
Length = 1462
Score = 209 bits (451), Expect(2) = 2e-065
Identities = 82/163 (50%), Positives = 114/163 (69%)
Frame = +1 / +2
Query: 7 TNGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTI 186
T+ I GI L++K FHIN+ +K++T +DV I APA+ NTDG+HVG S ++I NS I
Sbjct: 551 TDAKIRGITSLDAKHFHINVIGAKNMTFEDVKIIAPAESPNTDGIHVGRSDGIKIINSFI 730
Query: 187 GTGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGV 366
TGDDCVS+G G ++V +TCGPG GIS+G LGRY E++VS + + +C L+ T NG+
Sbjct: 731 STGDDCVSVGDGMKNLLVERVTCGPGHGISIGSLGRYSHEENVSGIKIINCTLQETDNGL 910
Query: 367 RIKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
RIK++ A TAS + FENI ++ V+NPI+IDQ +CP C
Sbjct: 911 RIKTWPSAACTTTASDIHFENILLKNVSNPILIDQEYCPWNQC 1039
Score = 122 bits (262), Expect(2) = 8e-028
Identities = 66/162 (40%), Positives = 80/162 (49%)
Frame = -1 / -2
Query: 488 FWGQKYWSMMMGLATSSILMFSKVRWDAVSTDSASSYDLMRTPLVVFLSTQXXXXXXXXX 309
F GQ WSM MGL T MFSK +AV +A + L+ PL V Q
Sbjct: 1032 FHGQYSWSMRMGLLTFLRRMFSKWISEAVVVQAAEGHVLILRPLSVSWRVQLMILMPLTF 853
Query: 308 XXXXXRPRQPTLMPCPGPQVMLFTMTPSLPGPMETQSSPVPMVELVMRTLEDPPTWTPSV 129
PR P L+PCPGP V L T +P P ETQSSPV + EL++ PTW PSV
Sbjct: 852 SSWLYLPRLPILIPCPGPHVTLSTRRFFIPSPTETQSSPVEINELMILIPSLLPTWIPSV 673
Query: 128 FSTSAGAVMFTSFTVMSLEVSMLMWKNLELSSLIPEIVPLVS 3
SAGA++ TS VM LMWK ++P I V+
Sbjct: 672 LGLSAGAMILTSSNVMFFAPMTLMWKCFASKEVMPLIFASVT 547
Score = 62.9 bits (131), Expect(2) = 2e-065
Identities = 24/70 (34%), Positives = 38/70 (54%)
Frame = +1 / +2
Query: 505 RSNSSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVC 684
+ S + + +++F+ I GTS +AV LLCS+ PC V + DVN++Y G + C
Sbjct: 1043 KQKPSTIKLANISFKKIRGTSGNKDAVKLLCSKGYPCQNVEVGDVNIQYTGADGPATFQC 1222
Query: 685 SNAKGTAKGS 714
SN G+
Sbjct: 1223 SNVSPKLVGT 1252
Score = 23.5 bits (45), Expect(2) = 8e-028
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = -1 / -2
Query: 656 PAYSTLTSMSETPLHGCVSEQSRLTASGVDDVPEMLRKV 540
P Y TS + T HG TAS DVP + K+
Sbjct: 1194 PVYWMFTSPTSTF*HGYPLLHKSFTASLFPDVPLIFLKL 1078
>gb|AC002334.3| Arabidopsis thaliana chromosome 2 clone F25I18 map TEn5, complete
sequence
Length = 93158
Score = 193 bits (416), Expect(2) = 3e-065
Identities = 77/174 (44%), Positives = 115/174 (66%)
Frame = +1 / -3
Query: 226 DGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVRIKSYEDAESVLT 405
D ++ N CGPG GISVG LGRYK+EK+V +TVR+ ++ TT+G+RIK++ + S ++
Sbjct: 45999 DVLISPNNRCGPGHGISVGSLGRYKEEKNVQGLTVRNSIINGTTDGLRIKTWAKSVSQIS 45820
Query: 406 ASHLTFENIRMEEVANPIIIDQYFCPQKVCPGKRSNSSHVSIKDVTFRNISGTSSTPEAV 585
S+ +ENI+M V NPI+IDQ +CP C +SHV IKDV + NI GTS++ EA+
Sbjct: 45819 VSNFLYENIQMINVGNPIVIDQQYCPHGQCDSPGKYASHVQIKDVKYNNIWGTSTSKEAL 45640
Query: 586 SLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNAKGTAKGSLQALDCLV*SM 747
+ CS+T PC V L ++N+ Y G++ A+C N G+ +G + +C V*S+
Sbjct: 45639 KMQCSKTFPCQDVELSNINLHYVGRDGLVTALCENVGGSIRGKIVPANCRV*SL 45478
Score = 88.1 bits (186), Expect(2) = 3e-065
Identities = 33/77 (42%), Positives = 54/77 (70%)
Frame = +1 / -2
Query: 19 ISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIGTGD 198
I+G++ +NSK H N+ + +D + V ITAP D NTDG+ +G SS+++I N TIGTGD
Sbjct: 46564 INGLRSINSKMGHFNLFSVEDFNITGVTITAPGDSPNTDGIKIGKSSHMQIYNVTIGTGD 46385
Query: 199 DCVSIGPGSDGVMVNNI 249
DC++I G+ + ++++
Sbjct: 46384 DCIAILDGTSNLDISDV 46334
>ref|NM_103464.1| Arabidopsis thaliana polygalacturonase AT1G43090 mRNA, complete cds
Length = 1335
Score = 249 bits (539), Expect = 7e-065
Identities = 101/216 (46%), Positives = 141/216 (65%)
Frame = +1 / +1
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
N I I LNSK H N + + V ITAP D NTDG+ +G SN+ I+N+ IG
Sbjct: 481 NSRIKDITSLNSKMGHFNFFSVHRFNITGVTITAPGDSPNTDGIKMGSCSNIHISNTNIG 660
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVR 369
TGDDC++I G+ + ++N+ CGPG GISVG LG+ KDEKDV +TVRD V T++G+R
Sbjct: 661 TGDDCIAILSGTTNLDISNVKCGPGHGISVGSLGKNKDEKDVKHLTVRDTVFNGTSDGIR 840
Query: 370 IKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVCPGKRSNSSHVSIKDVTFR 549
IK++E + S L S+ +ENI+M +V PI IDQ +CP C ++ SHV I+D+ +
Sbjct: 841 IKTWESSASKLVVSNFIYENIQMIDVGKPINIDQKYCPHPPCEHEKKGKSHVQIQDIKLK 1020
Query: 550 NISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAG 657
NI GTS+ AV+L CS++ PC V LID+N+++ G
Sbjct: 1021 NIYGTSNNIVAVNLQCSKSFPCKNVELIDINLKHTG 1128
>ref|NM_103465.1| Arabidopsis thaliana polygalacturonase AT1G43100 mRNA, complete cds
Length = 1335
Score = 249 bits (539), Expect = 7e-065
Identities = 101/216 (46%), Positives = 141/216 (65%)
Frame = +1 / +1
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
N I I LNSK H N + + V ITAP D NTDG+ +G SN+ I+N+ IG
Sbjct: 481 NSRIKDITSLNSKMGHFNFFSVHRFNITGVTITAPGDSPNTDGIKMGSCSNIHISNTNIG 660
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVR 369
TGDDC++I G+ + ++N+ CGPG GISVG LG+ KDEKDV +TVRD V T++G+R
Sbjct: 661 TGDDCIAILSGTTNLDISNVKCGPGHGISVGSLGKNKDEKDVKHLTVRDTVFNGTSDGIR 840
Query: 370 IKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVCPGKRSNSSHVSIKDVTFR 549
IK++E + S L S+ +ENI+M +V PI IDQ +CP C ++ SHV I+D+ +
Sbjct: 841 IKTWESSASKLVVSNFIYENIQMIDVGKPINIDQKYCPHPPCEHEKKGKSHVQIQDIKLK 1020
Query: 550 NISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAG 657
NI GTS+ AV+L CS++ PC V LID+N+++ G
Sbjct: 1021 NIYGTSNNIVAVNLQCSKSFPCKNVELIDINLKHTG 1128
>gb|DQ056483.1| Arabidopsis thaliana glycoside hydrolase family 28 protein
(At1g43080) mRNA, complete cds
Length = 1215
Score = 249 bits (538), Expect = 1e-064
Identities = 101/216 (46%), Positives = 141/216 (65%)
Frame = +1 / +1
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
N I I LNSK H N + + V ITAP D NTDG+ +G SN+ I+N+ IG
Sbjct: 481 NSRIKDITSLNSKMGHFNFFSVHRFNITGVTITAPGDSPNTDGIKMGSCSNIHISNTNIG 660
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVR 369
TGDDC++I G+ + ++NI CGPG GISVG LG+ KDEKDV +TVRD V T++G+R
Sbjct: 661 TGDDCIAILSGTTNLDISNIKCGPGHGISVGSLGKNKDEKDVKHLTVRDTVFNGTSDGIR 840
Query: 370 IKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVCPGKRSNSSHVSIKDVTFR 549
IK++E + S + S+ +ENI+M +V PI IDQ +CP C ++ SHV I+D+ +
Sbjct: 841 IKTWESSASKIVVSNFIYENIQMIDVGKPINIDQKYCPHPPCEHEKKGESHVQIQDIKLK 1020
Query: 550 NISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAG 657
NI GTS+ AV+L CS++ PC V LID+N+++ G
Sbjct: 1021 NIYGTSNNIVAVNLQCSKSFPCKNVELIDINLKHTG 1128
>ref|NM_103463.1| Arabidopsis thaliana polygalacturonase AT1G43080 mRNA, complete cds
Length = 1215
Score = 249 bits (538), Expect = 1e-064
Identities = 101/216 (46%), Positives = 141/216 (65%)
Frame = +1 / +1
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
N I I LNSK H N + + V ITAP D NTDG+ +G SN+ I+N+ IG
Sbjct: 481 NSRIKDITSLNSKMGHFNFFSVHRFNITGVTITAPGDSPNTDGIKMGSCSNIHISNTNIG 660
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVR 369
TGDDC++I G+ + ++NI CGPG GISVG LG+ KDEKDV +TVRD V T++G+R
Sbjct: 661 TGDDCIAILSGTTNLDISNIKCGPGHGISVGSLGKNKDEKDVKHLTVRDTVFNGTSDGIR 840
Query: 370 IKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVCPGKRSNSSHVSIKDVTFR 549
IK++E + S + S+ +ENI+M +V PI IDQ +CP C ++ SHV I+D+ +
Sbjct: 841 IKTWESSASKIVVSNFIYENIQMIDVGKPINIDQKYCPHPPCEHEKKGESHVQIQDIKLK 1020
Query: 550 NISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAG 657
NI GTS+ AV+L CS++ PC V LID+N+++ G
Sbjct: 1021 NIYGTSNNIVAVNLQCSKSFPCKNVELIDINLKHTG 1128
>ref|NM_111663.2| Arabidopsis thaliana polygalacturonase AT3G07840 mRNA, complete cds
Length = 1296
Score = 200 bits (431), Expect(2) = 2e-064
Identities = 80/162 (49%), Positives = 110/162 (67%)
Frame = +1 / +1
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
N I I +++K FHIN+ +K++T +V + APA+ NTDG+H+G S V+I NS I
Sbjct: 535 NAEIRDISSIDAKNFHINVLGAKNMTFDNVKVIAPAESPNTDGIHLGRSEGVKILNSKIA 714
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVR 369
TGDDC+S+G G + V N+ CGPG GISVG LGRY E+DV+ +TV +C L+ T NG+R
Sbjct: 715 TGDDCISVGDGMKNLHVENVMCGPGHGISVGSLGRYVHEQDVTGITVVNCTLQGTDNGLR 894
Query: 370 IKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
IK++ A TAS + FENI + V+NPI+IDQ +CP C
Sbjct: 895 IKTWPSAACATTASGIHFENIILNNVSNPILIDQEYCPWNQC 1020
Score = 85.4 bits (180), Expect(3) = 6e-025
Identities = 39/82 (47%), Positives = 46/82 (56%)
Frame = -1 / -2
Query: 290 PRQPTLMPCPGPQVMLFTMTPSLPGPMETQSSPVPMVELVMRTLEDPPTWTPSVFSTSAG 111
PR PTL+PCPGP + T +P P E QSSPV ++EL + T P W PSV SAG
Sbjct: 815 PRLPTLIPCPGPHITFSTWRFFIPSPTEMQSSPVAILELRILTPSLLPKWIPSVLGLSAG 636
Query: 110 AVMFTSFTVMSLEVSMLMWKNL 45
A+ T VM L MWK L
Sbjct: 635 AMTLTLSKVMFLAPRTFMWKFL 570
Score = 68.9 bits (144), Expect(2) = 2e-064
Identities = 26/76 (34%), Positives = 42/76 (55%)
Frame = +1 / +1
Query: 505 RSNSSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVC 684
+ S + + D++F+NI GTS +AV LLCS+ PC+ V + ++N+EY G + +C
Sbjct: 1024 KQKPSTIKLVDISFKNIRGTSGNKDAVKLLCSKAHPCANVEIGNINLEYKGADGPPTFMC 1203
Query: 685 SNAKGTAKGSLQALDC 732
SN G+ C
Sbjct: 1204 SNVSPKLVGTQNPKAC 1251
Score = 38.6 bits (78), Expect(3) = 6e-025
Identities = 20/46 (43%), Positives = 27/46 (58%)
Frame = -1 / -2
Query: 488 FWGQKYWSMMMGLATSSILMFSKVRWDAVSTDSASSYDLMRTPLVV 351
F GQ WSM +GL T +MFSK +AV +A + L+ +PL V
Sbjct: 1013 FQGQYSWSMRIGLLTLLRMMFSK*IPEAVVAQAADGHVLILSPLSV 876
Score = 30.4 bits (60), Expect(3) = 6e-025
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = -1 / -2
Query: 656 PAYSTLTSMSETPLHGCVSEQSRLTASGVDDVPEMLRKVTS 534
P YS L T HGC + TAS DVP + K+ S
Sbjct: 1175 PLYSRLMFPISTFAHGCALLHNSFTASLFPDVPLIFLKLMS 1053
>emb|X73222.1|ATEGP A.thaliana mRNA for exopolygalacturonase
Length = 1617
Score = 169 bits (364), Expect(3) = 1e-063
Identities = 66/125 (52%), Positives = 91/125 (72%)
Frame = +1 / +2
Query: 7 TNGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTI 186
TN I+ I NSK FH+NI K+IT+ D++I AP + NTDG+H+G S+ V + + I
Sbjct: 653 TNSKINSITSTNSKLFHMNILNCKNITLTDISIDAPPESLNTDGIHIGRSNGVNLIGAKI 832
Query: 187 GTGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGV 366
TGDDCVSIG G++ ++V N+ CGPG GIS+G LGRY +E+ V VTVR C+++NT NGV
Sbjct: 833 KTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGV 1012
Query: 367 RIKSY 381
RIK++
Sbjct: 1013 RIKTW 1027
Score = 102 bits (217), Expect(2) = 2e-022
Identities = 49/110 (44%), Positives = 57/110 (51%)
Frame = -1 / -1
Query: 374 LMRTPLVVFLSTQXXXXXXXXXXXXXXRPRQPTLMPCPGPQVMLFTMTPSLPGPMETQSS 195
LMRTPL VFL PR P +PCPGP TM S+P PMETQSS
Sbjct: 1020 LMRTPLSVFLMRHFLTVTPFTGCSLGYLPRLPMEIPCPGPHSTFSTMRFSVPSPMETQSS 841
Query: 194 PVPMVELVMRTLEDPPTWTPSVFSTSAGAVMFTSFTVMSLEVSMLMWKNL 45
PV + + T D P W PSV S GA + S VM L++ M MWK+L
Sbjct: 840 PVLIFAPIKLTPLDLPMWIPSVLRLSGGASILISVRVMFLQLRMFMWKSL 691
Score = 75.8 bits (159), Expect(3) = 1e-063
Identities = 30/72 (41%), Positives = 43/72 (59%)
Frame = +1 / +2
Query: 517 SHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNAK 696
S V + DVT +NI GTS+T AV L+CS+ PC+ ++L D+N+ + GK ++ CSN K
Sbjct: 1154 SKVKLSDVTIKNIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIK 1333
Query: 697 GTAKGSLQALDC 732
G L C
Sbjct: 1334 PILSGKLVPAAC 1369
Score = 40.0 bits (81), Expect(3) = 1e-063
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +1 / +2
Query: 406 ASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
AS++ FE+I M+ V+ P++IDQ +CP C
Sbjct: 1049 ASNILFEDITMDNVSLPVLIDQEYCPYGHC 1138
Score = 29.5 bits (58), Expect(2) = 2e-022
Identities = 21/66 (31%), Positives = 27/66 (40%)
Frame = -1 / -1
Query: 731 QSRAWRLPLAVPLALLHTAMVLLFLPAYSTLTSMSETPLHGCVSEQSRLTASGVDDVPEM 552
Q+ PL + L L H LP ++ L S + G TA+ V DVP M
Sbjct: 1368 QAAGTNFPLRIGLMLEHAETAGPSLPLWTKLMSERAILVQGTPLLHISFTATFVADVPLM 1189
Query: 551 LRKVTS 534
VTS
Sbjct: 1188 FLIVTS 1171
>dbj|AB019229.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MDC16
Length = 84294
Score = 169 bits (363), Expect(3) = 1e-063
Identities = 66/125 (52%), Positives = 90/125 (72%)
Frame = +1 / -2
Query: 7 TNGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTI 186
TN I+ I NSK FH+NI K+IT+ D+ I AP + NTDG+H+G S+ V + + I
Sbjct: 74753 TNSKINSITSTNSKLFHMNILNCKNITLTDIGIDAPPESLNTDGIHIGRSNGVNLIGAKI 74574
Query: 187 GTGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGV 366
TGDDCVSIG G++ ++V N+ CGPG GIS+G LGRY +E+ V VTVR C+++NT NGV
Sbjct: 74573 KTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGV 74394
Query: 367 RIKSY 381
RIK++
Sbjct: 74393 RIKTW 74379
Score = 75.8 bits (159), Expect(3) = 1e-063
Identities = 30/72 (41%), Positives = 43/72 (59%)
Frame = +1 / -2
Query: 517 SHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNAK 696
S V + DVT +NI GTS+T AV L+CS+ PC+ ++L D+N+ + GK ++ CSN K
Sbjct: 74159 SKVKLSDVTIKNIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIK 73980
Query: 697 GTAKGSLQALDC 732
G L C
Sbjct: 73979 PILSGKLVPAAC 73944
Score = 40.0 bits (81), Expect(3) = 1e-063
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +1 / -2
Query: 406 ASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
AS++ FE+I M+ V+ P++IDQ +CP C
Sbjct: 74357 ASNILFEDITMDNVSLPVLIDQEYCPYGHC 74268
>emb|AJ223189.1|ATAJ3189 Arabidopsis thaliana PGA2 gene
Length = 2946
Score = 169 bits (363), Expect(3) = 1e-063
Identities = 66/125 (52%), Positives = 90/125 (72%)
Frame = +1 / +3
Query: 7 TNGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTI 186
TN I+ I NSK FH+NI K+IT+ D+ I AP + NTDG+H+G S+ V + + I
Sbjct: 1836 TNSKINSITSTNSKLFHMNILNCKNITLTDIGIDAPPESLNTDGIHIGRSNGVNLIGAKI 2015
Query: 187 GTGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGV 366
TGDDCVSIG G++ ++V N+ CGPG GIS+G LGRY +E+ V VTVR C+++NT NGV
Sbjct: 2016 KTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGV 2195
Query: 367 RIKSY 381
RIK++
Sbjct: 2196 RIKTW 2210
Score = 100 bits (213), Expect(2) = 1e-021
Identities = 49/110 (44%), Positives = 57/110 (51%)
Frame = -1 / -3
Query: 374 LMRTPLVVFLSTQXXXXXXXXXXXXXXRPRQPTLMPCPGPQVMLFTMTPSLPGPMETQSS 195
LMRTPL VFL PR P +PCPGP TM S+P PMETQSS
Sbjct: 2203 LMRTPLSVFLMRHFLTVTPFTGCSLGYLPRLPMEIPCPGPHSTFSTMRFSVPSPMETQSS 2024
Query: 194 PVPMVELVMRTLEDPPTWTPSVFSTSAGAVMFTSFTVMSLEVSMLMWKNL 45
PV + + T D P W PSV S GA + S VM L++ M MWK+L
Sbjct: 2023 PVLIFAPIKLTPLDLPMWIPSVLRLSGGASIPISVRVMFLQLRMFMWKSL 1874
Score = 75.8 bits (159), Expect(3) = 1e-063
Identities = 30/72 (41%), Positives = 43/72 (59%)
Frame = +1 / +1
Query: 517 SHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNAK 696
S V + DVT +NI GTS+T AV L+CS+ PC+ ++L D+N+ + GK ++ CSN K
Sbjct: 2428 SKVKLSDVTIKNIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIK 2607
Query: 697 GTAKGSLQALDC 732
G L C
Sbjct: 2608 PILSGKLVPAAC 2643
Score = 40.0 bits (81), Expect(3) = 1e-063
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +1 / +3
Query: 406 ASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
AS++ FE+I M+ V+ P++IDQ +CP C
Sbjct: 2232 ASNILFEDITMDNVSLPVLIDQEYCPYGHC 2321
Score = 29.5 bits (58), Expect(2) = 1e-021
Identities = 21/66 (31%), Positives = 27/66 (40%)
Frame = -1 / -2
Query: 731 QSRAWRLPLAVPLALLHTAMVLLFLPAYSTLTSMSETPLHGCVSEQSRLTASGVDDVPEM 552
Q+ PL + L L H LP ++ L S + G TA+ V DVP M
Sbjct: 2642 QAAGTNFPLRIGLMLEHAETAGPSLPLWTKLMSERAILVQGTPLLHISFTATFVADVPLM 2463
Query: 551 LRKVTS 534
VTS
Sbjct: 2462 FLIVTS 2445
>gb|AY062447.1| Arabidopsis thaliana polygalacturonase; pectinase (At3g14060;
MDC16.18) mRNA, complete cds
Length = 1667
Score = 169 bits (363), Expect(3) = 1e-063
Identities = 66/125 (52%), Positives = 90/125 (72%)
Frame = +1 / +1
Query: 7 TNGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTI 186
TN I+ I NSK FH+NI K+IT+ D+ I AP + NTDG+H+G S+ V + + I
Sbjct: 685 TNSKINSITSTNSKLFHMNILNCKNITLTDIGIDAPPESLNTDGIHIGRSNGVNLIGAKI 864
Query: 187 GTGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGV 366
TGDDCVSIG G++ ++V N+ CGPG GIS+G LGRY +E+ V VTVR C+++NT NGV
Sbjct: 865 KTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGV 1044
Query: 367 RIKSY 381
RIK++
Sbjct: 1045 RIKTW 1059
Score = 100 bits (213), Expect(2) = 8e-022
Identities = 49/110 (44%), Positives = 57/110 (51%)
Frame = -1 / -1
Query: 374 LMRTPLVVFLSTQXXXXXXXXXXXXXXRPRQPTLMPCPGPQVMLFTMTPSLPGPMETQSS 195
LMRTPL VFL PR P +PCPGP TM S+P PMETQSS
Sbjct: 1052 LMRTPLSVFLMRHFLTVTPFTGCSLGYLPRLPMEIPCPGPHSTFSTMRFSVPSPMETQSS 873
Query: 194 PVPMVELVMRTLEDPPTWTPSVFSTSAGAVMFTSFTVMSLEVSMLMWKNL 45
PV + + T D P W PSV S GA + S VM L++ M MWK+L
Sbjct: 872 PVLIFAPIKLTPLDLPMWIPSVLRLSGGASIPISVRVMFLQLRMFMWKSL 723
Score = 75.8 bits (159), Expect(3) = 1e-063
Identities = 30/72 (41%), Positives = 43/72 (59%)
Frame = +1 / +1
Query: 517 SHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNAK 696
S V + DVT +NI GTS+T AV L+CS+ PC+ ++L D+N+ + GK ++ CSN K
Sbjct: 1186 SKVKLSDVTIKNIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIK 1365
Query: 697 GTAKGSLQALDC 732
G L C
Sbjct: 1366 PILSGKLVPAAC 1401
Score = 40.0 bits (81), Expect(3) = 1e-063
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +1 / +1
Query: 406 ASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
AS++ FE+I M+ V+ P++IDQ +CP C
Sbjct: 1081 ASNILFEDITMDNVSLPVLIDQEYCPYGHC 1170
Score = 29.5 bits (58), Expect(2) = 8e-022
Identities = 21/66 (31%), Positives = 27/66 (40%)
Frame = -1 / -1
Query: 731 QSRAWRLPLAVPLALLHTAMVLLFLPAYSTLTSMSETPLHGCVSEQSRLTASGVDDVPEM 552
Q+ PL + L L H LP ++ L S + G TA+ V DVP M
Sbjct: 1400 QAAGTNFPLRIGLMLEHAETAGPSLPLWTKLMSERAILVQGTPLLHISFTATFVADVPLM 1221
Query: 551 LRKVTS 534
VTS
Sbjct: 1220 FLIVTS 1203
>ref|NM_112258.2| Arabidopsis thaliana polygalacturonase AT3G14040 mRNA, complete cds
Length = 1668
Score = 169 bits (363), Expect(3) = 1e-063
Identities = 66/125 (52%), Positives = 90/125 (72%)
Frame = +1 / +1
Query: 7 TNGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTI 186
TN I+ I NSK FH+NI K+IT+ D+ I AP + NTDG+H+G S+ V + + I
Sbjct: 685 TNSKINSITSTNSKLFHMNILNCKNITLTDIGIDAPPESLNTDGIHIGRSNGVNLIGAKI 864
Query: 187 GTGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGV 366
TGDDCVSIG G++ ++V N+ CGPG GIS+G LGRY +E+ V VTVR C+++NT NGV
Sbjct: 865 KTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGV 1044
Query: 367 RIKSY 381
RIK++
Sbjct: 1045 RIKTW 1059
Score = 100 bits (213), Expect(2) = 8e-022
Identities = 49/110 (44%), Positives = 57/110 (51%)
Frame = -1 / -2
Query: 374 LMRTPLVVFLSTQXXXXXXXXXXXXXXRPRQPTLMPCPGPQVMLFTMTPSLPGPMETQSS 195
LMRTPL VFL PR P +PCPGP TM S+P PMETQSS
Sbjct: 1052 LMRTPLSVFLMRHFLTVTPFTGCSLGYLPRLPMEIPCPGPHSTFSTMRFSVPSPMETQSS 873
Query: 194 PVPMVELVMRTLEDPPTWTPSVFSTSAGAVMFTSFTVMSLEVSMLMWKNL 45
PV + + T D P W PSV S GA + S VM L++ M MWK+L
Sbjct: 872 PVLIFAPIKLTPLDLPMWIPSVLRLSGGASIPISVRVMFLQLRMFMWKSL 723
Score = 75.8 bits (159), Expect(3) = 1e-063
Identities = 30/72 (41%), Positives = 43/72 (59%)
Frame = +1 / +1
Query: 517 SHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNAK 696
S V + DVT +NI GTS+T AV L+CS+ PC+ ++L D+N+ + GK ++ CSN K
Sbjct: 1186 SKVKLSDVTIKNIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIK 1365
Query: 697 GTAKGSLQALDC 732
G L C
Sbjct: 1366 PILSGKLVPAAC 1401
Score = 40.0 bits (81), Expect(3) = 1e-063
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +1 / +1
Query: 406 ASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
AS++ FE+I M+ V+ P++IDQ +CP C
Sbjct: 1081 ASNILFEDITMDNVSLPVLIDQEYCPYGHC 1170
Score = 29.5 bits (58), Expect(2) = 8e-022
Identities = 21/66 (31%), Positives = 27/66 (40%)
Frame = -1 / -2
Query: 731 QSRAWRLPLAVPLALLHTAMVLLFLPAYSTLTSMSETPLHGCVSEQSRLTASGVDDVPEM 552
Q+ PL + L L H LP ++ L S + G TA+ V DVP M
Sbjct: 1400 QAAGTNFPLRIGLMLEHAETAGPSLPLWTKLMSERAILVQGTPLLHISFTATFVADVPLM 1221
Query: 551 LRKVTS 534
VTS
Sbjct: 1220 FLIVTS 1203
>emb|BX823616.1|CNS0A4Y3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS57ZE12 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1644
Score = 169 bits (363), Expect(3) = 1e-063
Identities = 66/125 (52%), Positives = 90/125 (72%)
Frame = +1 / +2
Query: 7 TNGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTI 186
TN I+ I NSK FH+NI K+IT+ D+ I AP + NTDG+H+G S+ V + + I
Sbjct: 671 TNSKINSITSTNSKLFHMNILNCKNITLTDIGIDAPPESLNTDGIHIGRSNGVNLIGAKI 850
Query: 187 GTGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGV 366
TGDDCVSIG G++ ++V N+ CGPG GIS+G LGRY +E+ V VTVR C+++NT NGV
Sbjct: 851 KTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGV 1030
Query: 367 RIKSY 381
RIK++
Sbjct: 1031 RIKTW 1045
Score = 100 bits (213), Expect(2) = 8e-022
Identities = 49/110 (44%), Positives = 57/110 (51%)
Frame = -1 / -1
Query: 374 LMRTPLVVFLSTQXXXXXXXXXXXXXXRPRQPTLMPCPGPQVMLFTMTPSLPGPMETQSS 195
LMRTPL VFL PR P +PCPGP TM S+P PMETQSS
Sbjct: 1038 LMRTPLSVFLMRHFLTVTPFTGCSLGYLPRLPMEIPCPGPHSTFSTMRFSVPSPMETQSS 859
Query: 194 PVPMVELVMRTLEDPPTWTPSVFSTSAGAVMFTSFTVMSLEVSMLMWKNL 45
PV + + T D P W PSV S GA + S VM L++ M MWK+L
Sbjct: 858 PVLIFAPIKLTPLDLPMWIPSVLRLSGGASIPISVRVMFLQLRMFMWKSL 709
Score = 75.8 bits (159), Expect(3) = 1e-063
Identities = 30/72 (41%), Positives = 43/72 (59%)
Frame = +1 / +2
Query: 517 SHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNAK 696
S V + DVT +NI GTS+T AV L+CS+ PC+ ++L D+N+ + GK ++ CSN K
Sbjct: 1172 SKVKLSDVTIKNIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIK 1351
Query: 697 GTAKGSLQALDC 732
G L C
Sbjct: 1352 PILSGKLVPAAC 1387
Score = 40.0 bits (81), Expect(3) = 1e-063
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +1 / +2
Query: 406 ASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
AS++ FE+I M+ V+ P++IDQ +CP C
Sbjct: 1067 ASNILFEDITMDNVSLPVLIDQEYCPYGHC 1156
Score = 29.5 bits (58), Expect(2) = 8e-022
Identities = 21/66 (31%), Positives = 27/66 (40%)
Frame = -1 / -1
Query: 731 QSRAWRLPLAVPLALLHTAMVLLFLPAYSTLTSMSETPLHGCVSEQSRLTASGVDDVPEM 552
Q+ PL + L L H LP ++ L S + G TA+ V DVP M
Sbjct: 1386 QAAGTNFPLRIGLMLEHAETAGPSLPLWTKLMSERAILVQGTPLLHISFTATFVADVPLM 1207
Query: 551 LRKVTS 534
VTS
Sbjct: 1206 FLIVTS 1189
>gb|AY114635.1| Arabidopsis thaliana polygalacturonase; pectinase (At3g14060) mRNA,
complete cds
Length = 1484
Score = 169 bits (363), Expect(3) = 1e-063
Identities = 66/125 (52%), Positives = 90/125 (72%)
Frame = +1 / +1
Query: 7 TNGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTI 186
TN I+ I NSK FH+NI K+IT+ D+ I AP + NTDG+H+G S+ V + + I
Sbjct: 595 TNSKINSITSTNSKLFHMNILNCKNITLTDIGIDAPPESLNTDGIHIGRSNGVNLIGAKI 774
Query: 187 GTGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGV 366
TGDDCVSIG G++ ++V N+ CGPG GIS+G LGRY +E+ V VTVR C+++NT NGV
Sbjct: 775 KTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGV 954
Query: 367 RIKSY 381
RIK++
Sbjct: 955 RIKTW 969
Score = 100 bits (213), Expect(2) = 7e-022
Identities = 49/110 (44%), Positives = 57/110 (51%)
Frame = -1 / -1
Query: 374 LMRTPLVVFLSTQXXXXXXXXXXXXXXRPRQPTLMPCPGPQVMLFTMTPSLPGPMETQSS 195
LMRTPL VFL PR P +PCPGP TM S+P PMETQSS
Sbjct: 962 LMRTPLSVFLMRHFLTVTPFTGCSLGYLPRLPMEIPCPGPHSTFSTMRFSVPSPMETQSS 783
Query: 194 PVPMVELVMRTLEDPPTWTPSVFSTSAGAVMFTSFTVMSLEVSMLMWKNL 45
PV + + T D P W PSV S GA + S VM L++ M MWK+L
Sbjct: 782 PVLIFAPIKLTPLDLPMWIPSVLRLSGGASIPISVRVMFLQLRMFMWKSL 633
Score = 75.8 bits (159), Expect(3) = 1e-063
Identities = 30/72 (41%), Positives = 43/72 (59%)
Frame = +1 / +1
Query: 517 SHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNAK 696
S V + DVT +NI GTS+T AV L+CS+ PC+ ++L D+N+ + GK ++ CSN K
Sbjct: 1096 SKVKLSDVTIKNIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIK 1275
Query: 697 GTAKGSLQALDC 732
G L C
Sbjct: 1276 PILSGKLVPAAC 1311
Score = 40.0 bits (81), Expect(3) = 1e-063
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +1 / +1
Query: 406 ASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
AS++ FE+I M+ V+ P++IDQ +CP C
Sbjct: 991 ASNILFEDITMDNVSLPVLIDQEYCPYGHC 1080
Score = 29.5 bits (58), Expect(2) = 7e-022
Identities = 21/66 (31%), Positives = 27/66 (40%)
Frame = -1 / -1
Query: 731 QSRAWRLPLAVPLALLHTAMVLLFLPAYSTLTSMSETPLHGCVSEQSRLTASGVDDVPEM 552
Q+ PL + L L H LP ++ L S + G TA+ V DVP M
Sbjct: 1310 QAAGTNFPLRIGLMLEHAETAGPSLPLWTKLMSERAILVQGTPLLHISFTATFVADVPLM 1131
Query: 551 LRKVTS 534
VTS
Sbjct: 1130 FLIVTS 1113
>ref|NM_127105.1| Arabidopsis thaliana polygalacturonase AT2G15450 mRNA, complete cds
Length = 1215
Score = 245 bits (529), Expect = 2e-063
Identities = 98/216 (45%), Positives = 139/216 (64%)
Frame = +1 / +1
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
N I I LNSK H N + + V ITAP D NTDG+ +G SN++I+++ IG
Sbjct: 481 NSNIKDITSLNSKMGHFNFFSVHHFNITGVTITAPGDSPNTDGIKMGSCSNIQISDTNIG 660
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVR 369
TGDDC++I G+ + ++N+ CGPG GISVG LG+ KDEKDV D+ VRD + T++G+R
Sbjct: 661 TGDDCIAILSGTTNLNISNVNCGPGHGISVGSLGKNKDEKDVKDLIVRDVIFNGTSDGIR 840
Query: 370 IKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVCPGKRSNSSHVSIKDVTFR 549
IK++E + S + S+ +ENI+M +V PI IDQ +CP C +R SHV I+++ +
Sbjct: 841 IKNWESSASKILVSNFVYENIQMIDVGKPINIDQKYCPHPPCEHERKGESHVQIQNLKLK 1020
Query: 550 NISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAG 657
NI GTS AV+L CS+ PC V LID+N++ G
Sbjct: 1021 NIYGTSKNKVAVNLQCSKIFPCKNVELIDINIKQNG 1128
>ref|NM_127106.1| Arabidopsis thaliana polygalacturonase AT2G15460 mRNA, complete cds
Length = 1209
Score = 245 bits (529), Expect = 2e-063
Identities = 98/216 (45%), Positives = 139/216 (64%)
Frame = +1 / +1
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
N I I LNSK H N + + V ITAP D NTDG+ +G SN++I+++ IG
Sbjct: 481 NSNIKDITSLNSKMGHFNFFSVHHFNITGVTITAPGDSPNTDGIKMGSCSNIQISDTNIG 660
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVR 369
TGDDC++I G+ + ++N+ CGPG GISVG LG+ KDEKDV D+ VRD + T++G+R
Sbjct: 661 TGDDCIAILSGTTNLNISNVNCGPGHGISVGSLGKSKDEKDVKDLIVRDVIFNGTSDGIR 840
Query: 370 IKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVCPGKRSNSSHVSIKDVTFR 549
IK++E + S + S+ +ENI+M +V PI IDQ +CP C +R SHV I+++ +
Sbjct: 841 IKTWESSASKILVSNFVYENIQMIDVGKPINIDQKYCPHPPCEHERKGESHVQIQNLKLK 1020
Query: 550 NISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAG 657
NI GTS AV+L CS+ PC V LID+N++ G
Sbjct: 1021 NIYGTSKNKVAVNLQCSKIFPCKNVELIDINIKQNG 1128
>gb|AY056173.1| Arabidopsis thaliana putative exopolygalacturonase (At3g07850) mRNA,
complete cds
Length = 1705
Score = 169 bits (364), Expect(3) = 5e-063
Identities = 66/125 (52%), Positives = 90/125 (72%)
Frame = +1 / +3
Query: 7 TNGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTI 186
TN I+ I NSK FH+NI K+IT+ D+ I AP + NTDG+H+G S+ V + + I
Sbjct: 681 TNSKINSITSTNSKLFHMNILNCKNITLSDIGIDAPPESLNTDGIHIGRSNGVNLIGAKI 860
Query: 187 GTGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGV 366
TGDDCVSIG G++ ++V N+ CGPG GIS+G LGRY +E+ V VTVR C+++NT NGV
Sbjct: 861 KTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGV 1040
Query: 367 RIKSY 381
RIK++
Sbjct: 1041 RIKTW 1055
Score = 99.6 bits (211), Expect(2) = 5e-022
Identities = 49/110 (44%), Positives = 57/110 (51%)
Frame = -1 / -1
Query: 374 LMRTPLVVFLSTQXXXXXXXXXXXXXXRPRQPTLMPCPGPQVMLFTMTPSLPGPMETQSS 195
LMRTPL VFL PR P +PCPGP TM S+P PMETQSS
Sbjct: 1048 LMRTPLSVFLMRHFLTVTPFTGCSLGYLPRLPMEIPCPGPHSTFSTMRFSVPSPMETQSS 869
Query: 194 PVPMVELVMRTLEDPPTWTPSVFSTSAGAVMFTSFTVMSLEVSMLMWKNL 45
PV + + T D P W PSV S GA + S VM L++ M MWK+L
Sbjct: 868 PVLIFAPIKLTPLDLPMWIPSVLRLSGGASIPISERVMFLQLRMFMWKSL 719
Score = 73.5 bits (154), Expect(3) = 5e-063
Identities = 29/72 (40%), Positives = 42/72 (58%)
Frame = +1 / +3
Query: 517 SHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNAK 696
S V + DVT + I GTS+T AV L+CS+ PC+ ++L D+N+ + GK ++ CSN K
Sbjct: 1182 SQVKLSDVTIKGIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIK 1361
Query: 697 GTAKGSLQALDC 732
G L C
Sbjct: 1362 PILSGKLVPAAC 1397
Score = 40.0 bits (81), Expect(3) = 5e-063
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +1 / +3
Query: 406 ASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
AS++ FE+I M+ V+ P++IDQ +CP C
Sbjct: 1077 ASNILFEDITMDNVSLPVLIDQEYCPYGHC 1166
Score = 31.3 bits (62), Expect(2) = 5e-022
Identities = 23/72 (31%), Positives = 30/72 (41%)
Frame = -1 / -1
Query: 731 QSRAWRLPLAVPLALLHTAMVLLFLPAYSTLTSMSETPLHGCVSEQSRLTASGVDDVPEM 552
Q+ PL + L L H LP ++ L S + G TA+ V DVP M
Sbjct: 1396 QAAGTNFPLRIGLMLEHAETAGPSLPLWTKLMSERAILVQGTPLLHISFTATFVADVPLM 1217
Query: 551 LRKVTSLMETCE 516
VTS TC+
Sbjct: 1216 PLIVTSDNFTCD 1181
>ref|NM_111664.1| Arabidopsis thaliana polygalacturonase AT3G07850 mRNA, complete cds
Length = 1690
Score = 169 bits (364), Expect(3) = 5e-063
Identities = 66/125 (52%), Positives = 90/125 (72%)
Frame = +1 / +3
Query: 7 TNGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTI 186
TN I+ I NSK FH+NI K+IT+ D+ I AP + NTDG+H+G S+ V + + I
Sbjct: 681 TNSKINSITSTNSKLFHMNILNCKNITLSDIGIDAPPESLNTDGIHIGRSNGVNLIGAKI 860
Query: 187 GTGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGV 366
TGDDCVSIG G++ ++V N+ CGPG GIS+G LGRY +E+ V VTVR C+++NT NGV
Sbjct: 861 KTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGV 1040
Query: 367 RIKSY 381
RIK++
Sbjct: 1041 RIKTW 1055
Score = 99.6 bits (211), Expect(2) = 5e-022
Identities = 49/110 (44%), Positives = 57/110 (51%)
Frame = -1 / -1
Query: 374 LMRTPLVVFLSTQXXXXXXXXXXXXXXRPRQPTLMPCPGPQVMLFTMTPSLPGPMETQSS 195
LMRTPL VFL PR P +PCPGP TM S+P PMETQSS
Sbjct: 1048 LMRTPLSVFLMRHFLTVTPFTGCSLGYLPRLPMEIPCPGPHSTFSTMRFSVPSPMETQSS 869
Query: 194 PVPMVELVMRTLEDPPTWTPSVFSTSAGAVMFTSFTVMSLEVSMLMWKNL 45
PV + + T D P W PSV S GA + S VM L++ M MWK+L
Sbjct: 868 PVLIFAPIKLTPLDLPMWIPSVLRLSGGASIPISERVMFLQLRMFMWKSL 719
Score = 73.5 bits (154), Expect(3) = 5e-063
Identities = 29/72 (40%), Positives = 42/72 (58%)
Frame = +1 / +3
Query: 517 SHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNAK 696
S V + DVT + I GTS+T AV L+CS+ PC+ ++L D+N+ + GK ++ CSN K
Sbjct: 1182 SQVKLSDVTIKGIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIK 1361
Query: 697 GTAKGSLQALDC 732
G L C
Sbjct: 1362 PILSGKLVPAAC 1397
Score = 40.0 bits (81), Expect(3) = 5e-063
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +1 / +3
Query: 406 ASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
AS++ FE+I M+ V+ P++IDQ +CP C
Sbjct: 1077 ASNILFEDITMDNVSLPVLIDQEYCPYGHC 1166
Score = 31.3 bits (62), Expect(2) = 5e-022
Identities = 23/72 (31%), Positives = 30/72 (41%)
Frame = -1 / -1
Query: 731 QSRAWRLPLAVPLALLHTAMVLLFLPAYSTLTSMSETPLHGCVSEQSRLTASGVDDVPEM 552
Q+ PL + L L H LP ++ L S + G TA+ V DVP M
Sbjct: 1396 QAAGTNFPLRIGLMLEHAETAGPSLPLWTKLMSERAILVQGTPLLHISFTATFVADVPLM 1217
Query: 551 LRKVTSLMETCE 516
VTS TC+
Sbjct: 1216 PLIVTSDNFTCD 1181
>emb|X72292.1|ATEXOPB A.thaliana (clone GBGa483) mRNA for exopolygalacturonase
Length = 1652
Score = 169 bits (364), Expect(3) = 5e-063
Identities = 66/125 (52%), Positives = 90/125 (72%)
Frame = +1 / +2
Query: 7 TNGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTI 186
TN I+ I NSK FH+NI K+IT+ D+ I AP + NTDG+H+G S+ V + + I
Sbjct: 644 TNSKINSITSTNSKLFHMNILNCKNITLSDIGIDAPPESLNTDGIHIGRSNGVNLIGAKI 823
Query: 187 GTGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGV 366
TGDDCVSIG G++ ++V N+ CGPG GIS+G LGRY +E+ V VTVR C+++NT NGV
Sbjct: 824 KTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGV 1003
Query: 367 RIKSY 381
RIK++
Sbjct: 1004 RIKTW 1018
Score = 99.6 bits (211), Expect(2) = 4e-022
Identities = 49/110 (44%), Positives = 57/110 (51%)
Frame = -1 / -3
Query: 374 LMRTPLVVFLSTQXXXXXXXXXXXXXXRPRQPTLMPCPGPQVMLFTMTPSLPGPMETQSS 195
LMRTPL VFL PR P +PCPGP TM S+P PMETQSS
Sbjct: 1011 LMRTPLSVFLMRHFLTVTPFTGCSLGYLPRLPMEIPCPGPHSTFSTMRFSVPSPMETQSS 832
Query: 194 PVPMVELVMRTLEDPPTWTPSVFSTSAGAVMFTSFTVMSLEVSMLMWKNL 45
PV + + T D P W PSV S GA + S VM L++ M MWK+L
Sbjct: 831 PVLIFAPIKLTPLDLPMWIPSVLRLSGGASIPISERVMFLQLRMFMWKSL 682
Score = 73.5 bits (154), Expect(3) = 5e-063
Identities = 29/72 (40%), Positives = 42/72 (58%)
Frame = +1 / +2
Query: 517 SHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNAK 696
S V + DVT + I GTS+T AV L+CS+ PC+ ++L D+N+ + GK ++ CSN K
Sbjct: 1145 SQVKLSDVTIKGIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIK 1324
Query: 697 GTAKGSLQALDC 732
G L C
Sbjct: 1325 PILSGKLVPAAC 1360
Score = 40.0 bits (81), Expect(3) = 5e-063
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +1 / +2
Query: 406 ASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
AS++ FE+I M+ V+ P++IDQ +CP C
Sbjct: 1040 ASNILFEDITMDNVSLPVLIDQEYCPYGHC 1129
Score = 31.3 bits (62), Expect(2) = 4e-022
Identities = 23/72 (31%), Positives = 30/72 (41%)
Frame = -1 / -3
Query: 731 QSRAWRLPLAVPLALLHTAMVLLFLPAYSTLTSMSETPLHGCVSEQSRLTASGVDDVPEM 552
Q+ PL + L L H LP ++ L S + G TA+ V DVP M
Sbjct: 1359 QAAGTNFPLRIGLMLEHAETAGPSLPLWTKLMSERAILVQGTPLLHISFTATFVADVPLM 1180
Query: 551 LRKVTSLMETCE 516
VTS TC+
Sbjct: 1179 PLIVTSDNFTCD 1144
>gb|AY091200.1| Arabidopsis thaliana putative exopolygalacturonase (At3g07850)
mRNA, complete cds
Length = 1366
Score = 169 bits (364), Expect(3) = 5e-063
Identities = 66/125 (52%), Positives = 90/125 (72%)
Frame = +1 / +1
Query: 7 TNGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTI 186
TN I+ I NSK FH+NI K+IT+ D+ I AP + NTDG+H+G S+ V + + I
Sbjct: 592 TNSKINSITSTNSKLFHMNILNCKNITLSDIGIDAPPESLNTDGIHIGRSNGVNLIGAKI 771
Query: 187 GTGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGV 366
TGDDCVSIG G++ ++V N+ CGPG GIS+G LGRY +E+ V VTVR C+++NT NGV
Sbjct: 772 KTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGV 951
Query: 367 RIKSY 381
RIK++
Sbjct: 952 RIKTW 966
Score = 99.6 bits (211), Expect(2) = 4e-022
Identities = 49/110 (44%), Positives = 57/110 (51%)
Frame = -1 / -3
Query: 374 LMRTPLVVFLSTQXXXXXXXXXXXXXXRPRQPTLMPCPGPQVMLFTMTPSLPGPMETQSS 195
LMRTPL VFL PR P +PCPGP TM S+P PMETQSS
Sbjct: 959 LMRTPLSVFLMRHFLTVTPFTGCSLGYLPRLPMEIPCPGPHSTFSTMRFSVPSPMETQSS 780
Query: 194 PVPMVELVMRTLEDPPTWTPSVFSTSAGAVMFTSFTVMSLEVSMLMWKNL 45
PV + + T D P W PSV S GA + S VM L++ M MWK+L
Sbjct: 779 PVLIFAPIKLTPLDLPMWIPSVLRLSGGASIPISERVMFLQLRMFMWKSL 630
Score = 73.5 bits (154), Expect(3) = 5e-063
Identities = 29/72 (40%), Positives = 42/72 (58%)
Frame = +1 / +1
Query: 517 SHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNAK 696
S V + DVT + I GTS+T AV L+CS+ PC+ ++L D+N+ + GK ++ CSN K
Sbjct: 1093 SQVKLSDVTIKGIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIK 1272
Query: 697 GTAKGSLQALDC 732
G L C
Sbjct: 1273 PILSGKLVPAAC 1308
Score = 40.0 bits (81), Expect(3) = 5e-063
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +1 / +1
Query: 406 ASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
AS++ FE+I M+ V+ P++IDQ +CP C
Sbjct: 988 ASNILFEDITMDNVSLPVLIDQEYCPYGHC 1077
Score = 31.3 bits (62), Expect(2) = 4e-022
Identities = 23/72 (31%), Positives = 30/72 (41%)
Frame = -1 / -3
Query: 731 QSRAWRLPLAVPLALLHTAMVLLFLPAYSTLTSMSETPLHGCVSEQSRLTASGVDDVPEM 552
Q+ PL + L L H LP ++ L S + G TA+ V DVP M
Sbjct: 1307 QAAGTNFPLRIGLMLEHAETAGPSLPLWTKLMSERAILVQGTPLLHISFTATFVADVPLM 1128
Query: 551 LRKVTSLMETCE 516
VTS TC+
Sbjct: 1127 PLIVTSDNFTCD 1092
>ref|NM_129589.1| Arabidopsis thaliana polygalacturonase AT2G40310 mRNA, complete cds
Length = 1215
Score = 243 bits (525), Expect = 6e-063
Identities = 97/221 (43%), Positives = 141/221 (63%)
Frame = +1 / +1
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
N I I LNSK H N + + V ITA D NTDG+ +G SN+ I+N+ IG
Sbjct: 481 NSNIKDITSLNSKMGHFNFFSVHHFNITGVTITASGDSPNTDGIKMGSCSNMHISNTNIG 660
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVR 369
TGDDC++I G+ + ++N+ CGPG GISVG LG+ KDEKDV ++TVRD + T++G+R
Sbjct: 661 TGDDCIAILSGTTNLDISNVKCGPGHGISVGSLGKNKDEKDVKNLTVRDVIFNGTSDGIR 840
Query: 370 IKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVCPGKRSNSSHVSIKDVTFR 549
IK++E + S + S+ +ENI+M +V PI IDQ +CP C ++ SHV I+D+ +
Sbjct: 841 IKTWESSASKILVSNFVYENIQMIDVGKPINIDQKYCPHPPCEHEQKGESHVQIQDLKLK 1020
Query: 550 NISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKT 672
NI GTS A++L CS++ PC + LID+N++ G N +
Sbjct: 1021 NIYGTSKNKVAMNLQCSKSFPCKNIELIDINIKSNGLENSS 1143
>dbj|AB023039.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MIF21
Length = 59372
Score = 210 bits (453), Expect(2) = 7e-063
Identities = 82/163 (50%), Positives = 114/163 (69%)
Frame = +1 / -2
Query: 7 TNGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTI 186
T+ I GI L++K FHIN+ +K++T +DV I APA+ NTDG+HVG S ++I NS I
Sbjct: 11422 TDAKIRGITSLDAKHFHINVIGAKNVTFEDVKIIAPAESPNTDGIHVGRSDGIKIINSFI 11243
Query: 187 GTGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGV 366
TGDDCVS+G G ++V +TCGPG GIS+G LGRY E++VS + + +C L+ T NG+
Sbjct: 11242 STGDDCVSVGDGMKNLLVERVTCGPGHGISIGSLGRYSHEENVSGIKIINCTLQETDNGL 11063
Query: 367 RIKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
RIK++ A TAS + FENI ++ V+NPI+IDQ +CP C
Sbjct: 11062 RIKTWPSAACTTTASDIHFENILLKNVSNPILIDQEYCPWNQC 10934
Score = 120 bits (256), Expect = 8e-026
Identities = 65/162 (40%), Positives = 79/162 (48%)
Frame = -1 / +3
Query: 488 FWGQKYWSMMMGLATSSILMFSKVRWDAVSTDSASSYDLMRTPLVVFLSTQXXXXXXXXX 309
F GQ WSM MGL T MFSK +AV +A + L+ PL V Q
Sbjct: 10941 FHGQYSWSMRMGLLTFLRRMFSKWISEAVVVQAAEGHVLILRPLSVSWRVQLMILMPLTF 11120
Query: 308 XXXXXRPRQPTLMPCPGPQVMLFTMTPSLPGPMETQSSPVPMVELVMRTLEDPPTWTPSV 129
PR P L+PCPGP V L T +P P ETQSSPV + EL++ PTW PSV
Sbjct: 11121 SSWLYLPRLPILIPCPGPHVTLSTRRFFIPSPTETQSSPVEINELMILIPSLLPTWIPSV 11300
Query: 128 FSTSAGAVMFTSFTVMSLEVSMLMWKNLELSSLIPEIVPLVS 3
SAGA++ TS V LMWK ++P I V+
Sbjct: 11301 LGLSAGAMILTSSNVTFFAPMTLMWKCFASKEVMPLIFASVT 11426
Score = 62.5 bits (130), Expect(2) = 7e-063
Identities = 24/66 (36%), Positives = 37/66 (56%)
Frame = +1 / -3
Query: 517 SHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNAK 696
S + + +++F+ I GTS +AV LLCS+ PC V + DVN++Y G + CSN
Sbjct: 10767 STIKLANISFKKIRGTSGNKDAVKLLCSKGYPCQNVEVGDVNIQYTGADGPATFQCSNVS 10588
Query: 697 GTAKGS 714
G+
Sbjct: 10587 PKLVGT 10570
>gb|AY065239.1| Arabidopsis thaliana putative polygalacturonase(PGA3 (At3g07820)
mRNA, complete cds
Length = 1401
Score = 199 bits (429), Expect(2) = 8e-063
Identities = 79/169 (46%), Positives = 116/169 (68%)
Frame = +1 / +2
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
N I I +++K FHIN+ +K++T+ ++ I AP D NTDG+H+G S V+I NS I
Sbjct: 509 NSEIRDISSIDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGVKILNSFIS 688
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVR 369
TGDDC+S+G G + V +TCGPG GISVG LGRY E+DVS + V +C L+ T NG+R
Sbjct: 689 TGDDCISVGDGMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTLQETDNGLR 868
Query: 370 IKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVCPGKRSNS 516
IK++ A TAS + FE+I +++V+NPI+IDQ +CP C +++++
Sbjct: 869 IKTWPSAACSTTASDIHFEDIILKDVSNPILIDQEYCPWNQCNKQKAST 1015
Score = 87.7 bits (185), Expect(3) = 1e-023
Identities = 41/82 (50%), Positives = 47/82 (57%)
Frame = -1 / -1
Query: 290 PRQPTLMPCPGPQVMLFTMTPSLPGPMETQSSPVPMVELVMRTLEDPPTWTPSVFSTSAG 111
PR PTL+PCPGP V T +P P E QSSPV M EL + T P W PSV S+G
Sbjct: 789 PRLPTLIPCPGPHVTFST*RFFIPSPTEIQSSPVEMKELRILTPSLLPKWIPSVLGLSSG 610
Query: 110 AVMFTSFTVMSLEVSMLMWKNL 45
A + F VM L + LMWK L
Sbjct: 609 ATILMLFMVMFLAPNTLMWKFL 544
Score = 64.3 bits (134), Expect(2) = 8e-063
Identities = 25/76 (32%), Positives = 41/76 (53%)
Frame = +1 / +2
Query: 505 RSNSSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVC 684
+ +S + + +++F+NI GTS +AV LLCS+ PC V + D++++Y G + C
Sbjct: 998 KQKASTIKLVNISFKNIRGTSGNKDAVKLLCSKGYPCQNVEIGDIDIKYNGADGPATFHC 1177
Query: 685 SNAKGTAKGSLQALDC 732
SN GS C
Sbjct: 1178 SNVSPKILGSQSPKAC 1225
Score = 37.3 bits (75), Expect(3) = 1e-023
Identities = 20/46 (43%), Positives = 26/46 (56%)
Frame = -1 / -1
Query: 488 FWGQKYWSMMMGLATSSILMFSKVRWDAVSTDSASSYDLMRTPLVV 351
F GQ WSM +GL TS ++ SK DAV +A + L+ PL V
Sbjct: 987 FQGQYSWSMRIGLLTSLRIISSK*ISDAVVEQAAEGHVLILNPLSV 850
Score = 25.4 bits (49), Expect(3) = 1e-023
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = -1 / -1
Query: 656 PAYSTLTSMSETPLHGCVSEQSRLTASGVDDVPEMLRKV 540
P Y S T HG QS TAS DVP M K+
Sbjct: 1149 PLYLISMSPISTFWHGYPLLQSSFTASLFPDVPLMFLKL 1033
>ref|NM_111661.2| Arabidopsis thaliana polygalacturonase AT3G07820 mRNA, complete cds
Length = 1400
Score = 199 bits (429), Expect(2) = 8e-063
Identities = 79/169 (46%), Positives = 116/169 (68%)
Frame = +1 / +2
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
N I I +++K FHIN+ +K++T+ ++ I AP D NTDG+H+G S V+I NS I
Sbjct: 509 NSEIRDISSIDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGVKILNSFIS 688
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVR 369
TGDDC+S+G G + V +TCGPG GISVG LGRY E+DVS + V +C L+ T NG+R
Sbjct: 689 TGDDCISVGDGMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTLQETDNGLR 868
Query: 370 IKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVCPGKRSNS 516
IK++ A TAS + FE+I +++V+NPI+IDQ +CP C +++++
Sbjct: 869 IKTWPSAACSTTASDIHFEDIILKDVSNPILIDQEYCPWNQCNKQKAST 1015
Score = 87.7 bits (185), Expect(3) = 1e-023
Identities = 41/82 (50%), Positives = 47/82 (57%)
Frame = -1 / -3
Query: 290 PRQPTLMPCPGPQVMLFTMTPSLPGPMETQSSPVPMVELVMRTLEDPPTWTPSVFSTSAG 111
PR PTL+PCPGP V T +P P E QSSPV M EL + T P W PSV S+G
Sbjct: 789 PRLPTLIPCPGPHVTFST*RFFIPSPTEIQSSPVEMKELRILTPSLLPKWIPSVLGLSSG 610
Query: 110 AVMFTSFTVMSLEVSMLMWKNL 45
A + F VM L + LMWK L
Sbjct: 609 ATILMLFMVMFLAPNTLMWKFL 544
Score = 64.3 bits (134), Expect(2) = 8e-063
Identities = 25/76 (32%), Positives = 41/76 (53%)
Frame = +1 / +2
Query: 505 RSNSSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVC 684
+ +S + + +++F+NI GTS +AV LLCS+ PC V + D++++Y G + C
Sbjct: 998 KQKASTIKLVNISFKNIRGTSGNKDAVKLLCSKGYPCQNVEIGDIDIKYNGADGPATFHC 1177
Query: 685 SNAKGTAKGSLQALDC 732
SN GS C
Sbjct: 1178 SNVSPKILGSQSPKAC 1225
Score = 37.3 bits (75), Expect(3) = 1e-023
Identities = 20/46 (43%), Positives = 26/46 (56%)
Frame = -1 / -3
Query: 488 FWGQKYWSMMMGLATSSILMFSKVRWDAVSTDSASSYDLMRTPLVV 351
F GQ WSM +GL TS ++ SK DAV +A + L+ PL V
Sbjct: 987 FQGQYSWSMRIGLLTSLRIISSK*ISDAVVEQAAEGHVLILNPLSV 850
Score = 25.4 bits (49), Expect(3) = 1e-023
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = -1 / -3
Query: 656 PAYSTLTSMSETPLHGCVSEQSRLTASGVDDVPEMLRKV 540
P Y S T HG QS TAS DVP M K+
Sbjct: 1149 PLYLISMSPISTFWHGYPLLQSSFTASLFPDVPLMFLKL 1033
>gb|AY087578.1| Arabidopsis thaliana clone 36765 mRNA, complete sequence
Length = 1385
Score = 199 bits (429), Expect(2) = 8e-063
Identities = 79/169 (46%), Positives = 116/169 (68%)
Frame = +1 / +2
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
N I I +++K FHIN+ +K++T+ ++ I AP D NTDG+H+G S V+I NS I
Sbjct: 509 NSEIRDISSIDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGVKILNSFIS 688
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVR 369
TGDDC+S+G G + V +TCGPG GISVG LGRY E+DVS + V +C L+ T NG+R
Sbjct: 689 TGDDCISVGDGMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTLQETDNGLR 868
Query: 370 IKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVCPGKRSNS 516
IK++ A TAS + FE+I +++V+NPI+IDQ +CP C +++++
Sbjct: 869 IKTWPSAACSTTASDIHFEDIILKDVSNPILIDQEYCPWNQCNKQKAST 1015
Score = 87.7 bits (185), Expect(3) = 1e-023
Identities = 41/82 (50%), Positives = 47/82 (57%)
Frame = -1 / -3
Query: 290 PRQPTLMPCPGPQVMLFTMTPSLPGPMETQSSPVPMVELVMRTLEDPPTWTPSVFSTSAG 111
PR PTL+PCPGP V T +P P E QSSPV M EL + T P W PSV S+G
Sbjct: 789 PRLPTLIPCPGPHVTFST*RFFIPSPTEIQSSPVEMKELRILTPSLLPKWIPSVLGLSSG 610
Query: 110 AVMFTSFTVMSLEVSMLMWKNL 45
A + F VM L + LMWK L
Sbjct: 609 ATILMLFMVMFLAPNTLMWKFL 544
Score = 64.3 bits (134), Expect(2) = 8e-063
Identities = 25/76 (32%), Positives = 41/76 (53%)
Frame = +1 / +2
Query: 505 RSNSSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVC 684
+ +S + + +++F+NI GTS +AV LLCS+ PC V + D++++Y G + C
Sbjct: 998 KQKASTIKLVNISFKNIRGTSGNKDAVKLLCSKGYPCQNVEIGDIDIKYNGADGPATFHC 1177
Query: 685 SNAKGTAKGSLQALDC 732
SN GS C
Sbjct: 1178 SNVSPKILGSQSPKAC 1225
Score = 37.3 bits (75), Expect(3) = 1e-023
Identities = 20/46 (43%), Positives = 26/46 (56%)
Frame = -1 / -3
Query: 488 FWGQKYWSMMMGLATSSILMFSKVRWDAVSTDSASSYDLMRTPLVV 351
F GQ WSM +GL TS ++ SK DAV +A + L+ PL V
Sbjct: 987 FQGQYSWSMRIGLLTSLRIISSK*ISDAVVEQAAEGHVLILNPLSV 850
Score = 25.4 bits (49), Expect(3) = 1e-023
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = -1 / -3
Query: 656 PAYSTLTSMSETPLHGCVSEQSRLTASGVDDVPEMLRKV 540
P Y S T HG QS TAS DVP M K+
Sbjct: 1149 PLYLISMSPISTFWHGYPLLQSSFTASLFPDVPLMFLKL 1033
>gb|AY096534.1| Arabidopsis thaliana putative polygalacturonase (PGA3) (At3g07820)
mRNA, complete cds
Length = 1207
Score = 199 bits (429), Expect(2) = 8e-063
Identities = 79/169 (46%), Positives = 116/169 (68%)
Frame = +1 / +1
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
N I I +++K FHIN+ +K++T+ ++ I AP D NTDG+H+G S V+I NS I
Sbjct: 442 NSEIRDISSIDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGVKILNSFIS 621
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVR 369
TGDDC+S+G G + V +TCGPG GISVG LGRY E+DVS + V +C L+ T NG+R
Sbjct: 622 TGDDCISVGDGMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTLQETDNGLR 801
Query: 370 IKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVCPGKRSNS 516
IK++ A TAS + FE+I +++V+NPI+IDQ +CP C +++++
Sbjct: 802 IKTWPSAACSTTASDIHFEDIILKDVSNPILIDQEYCPWNQCNKQKAST 948
Score = 87.7 bits (185), Expect(3) = 1e-023
Identities = 41/82 (50%), Positives = 47/82 (57%)
Frame = -1 / -3
Query: 290 PRQPTLMPCPGPQVMLFTMTPSLPGPMETQSSPVPMVELVMRTLEDPPTWTPSVFSTSAG 111
PR PTL+PCPGP V T +P P E QSSPV M EL + T P W PSV S+G
Sbjct: 722 PRLPTLIPCPGPHVTFST*RFFIPSPTEIQSSPVEMKELRILTPSLLPKWIPSVLGLSSG 543
Query: 110 AVMFTSFTVMSLEVSMLMWKNL 45
A + F VM L + LMWK L
Sbjct: 542 ATILMLFMVMFLAPNTLMWKFL 477
Score = 64.3 bits (134), Expect(2) = 8e-063
Identities = 25/76 (32%), Positives = 41/76 (53%)
Frame = +1 / +1
Query: 505 RSNSSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVC 684
+ +S + + +++F+NI GTS +AV LLCS+ PC V + D++++Y G + C
Sbjct: 931 KQKASTIKLVNISFKNIRGTSGNKDAVKLLCSKGYPCQNVEIGDIDIKYNGADGPATFHC 1110
Query: 685 SNAKGTAKGSLQALDC 732
SN GS C
Sbjct: 1111 SNVSPKILGSQSPKAC 1158
Score = 37.3 bits (75), Expect(3) = 1e-023
Identities = 20/46 (43%), Positives = 26/46 (56%)
Frame = -1 / -3
Query: 488 FWGQKYWSMMMGLATSSILMFSKVRWDAVSTDSASSYDLMRTPLVV 351
F GQ WSM +GL TS ++ SK DAV +A + L+ PL V
Sbjct: 920 FQGQYSWSMRIGLLTSLRIISSK*ISDAVVEQAAEGHVLILNPLSV 783
Score = 25.4 bits (49), Expect(3) = 1e-023
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = -1 / -3
Query: 656 PAYSTLTSMSETPLHGCVSEQSRLTASGVDDVPEMLRKV 540
P Y S T HG QS TAS DVP M K+
Sbjct: 1082 PLYLISMSPISTFWHGYPLLQSSFTASLFPDVPLMFLKL 966
>emb|AJ005584.1|ATH005584 Arabidopsis thaliana mRNA for polygalacturonase
Length = 1350
Score = 199 bits (428), Expect(2) = 1e-062
Identities = 78/169 (46%), Positives = 116/169 (68%)
Frame = +1 / +2
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
N I I +++K FHIN+ +K++T+ ++ I AP D NTDG+H+G S ++I NS I
Sbjct: 467 NSEIRDISSIDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGIKILNSFIS 646
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVR 369
TGDDC+S+G G + V +TCGPG GISVG LGRY E+DVS + V +C L+ T NG+R
Sbjct: 647 TGDDCISVGDGMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTLQETDNGLR 826
Query: 370 IKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVCPGKRSNS 516
IK++ A TAS + FE+I +++V+NPI+IDQ +CP C +++++
Sbjct: 827 IKTWPSAACSTTASDIHFEDIILKDVSNPILIDQEYCPWNQCNKQKAST 973
Score = 84.9 bits (179), Expect(3) = 6e-023
Identities = 40/82 (48%), Positives = 46/82 (56%)
Frame = -1 / -1
Query: 290 PRQPTLMPCPGPQVMLFTMTPSLPGPMETQSSPVPMVELVMRTLEDPPTWTPSVFSTSAG 111
PR PTL+PCPGP V T +P P E QSSPV M EL + P W PSV S+G
Sbjct: 747 PRLPTLIPCPGPHVTFST*RFFIPSPTEIQSSPVEMKELRILIPSLLPKWIPSVLGLSSG 568
Query: 110 AVMFTSFTVMSLEVSMLMWKNL 45
A + F VM L + LMWK L
Sbjct: 567 ATILMLFMVMFLAPNTLMWKFL 502
Score = 64.3 bits (134), Expect(2) = 1e-062
Identities = 25/76 (32%), Positives = 41/76 (53%)
Frame = +1 / +2
Query: 505 RSNSSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVC 684
+ +S + + +++F+NI GTS +AV LLCS+ PC V + D++++Y G + C
Sbjct: 956 KQKASTIKLVNISFKNIRGTSGNKDAVKLLCSKGYPCQNVEIGDIDIKYNGADGPATFHC 1135
Query: 685 SNAKGTAKGSLQALDC 732
SN GS C
Sbjct: 1136 SNVSPKILGSQSPKAC 1183
Score = 37.3 bits (75), Expect(3) = 6e-023
Identities = 20/46 (43%), Positives = 26/46 (56%)
Frame = -1 / -1
Query: 488 FWGQKYWSMMMGLATSSILMFSKVRWDAVSTDSASSYDLMRTPLVV 351
F GQ WSM +GL TS ++ SK DAV +A + L+ PL V
Sbjct: 945 FQGQYSWSMRIGLLTSLRIISSK*ISDAVVEQAAEGHVLILNPLSV 808
Score = 25.4 bits (49), Expect(3) = 6e-023
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = -1 / -1
Query: 656 PAYSTLTSMSETPLHGCVSEQSRLTASGVDDVPEMLRKV 540
P Y S T HG QS TAS DVP M K+
Sbjct: 1107 PLYLISMSPISTFWHGYPLLQSSFTASLFPDVPLMFLKL 991
>ref|NM_117450.1| Arabidopsis thaliana polygalacturonase AT4G13760 mRNA, complete cds
Length = 1128
Score = 242 bits (523), Expect = 1e-062
Identities = 96/216 (44%), Positives = 138/216 (63%)
Frame = +1 / +1
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
N I I LNSK H N + + V ITAP + NTDG+ +G SN+ I+N+ IG
Sbjct: 394 NSNIKDITSLNSKMGHFNFFSVHHFNITGVTITAPGNSPNTDGIKMGSCSNIHISNTNIG 573
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVR 369
TGDDC++I G+ + ++N+ CGPG GISVG LG+ KDEKDV D+T+RD + T++G+R
Sbjct: 574 TGDDCIAILSGTTNLDISNVNCGPGHGISVGSLGKNKDEKDVKDLTIRDVIFNGTSDGIR 753
Query: 370 IKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVCPGKRSNSSHVSIKDVTFR 549
IK++E + S + S+ +ENI+M +V PI IDQ +CP C ++ SHV I+++ +
Sbjct: 754 IKTWESSASKILVSNFLYENIQMIDVGKPINIDQKYCPHPPCEHEQKGESHVQIQNLKLK 933
Query: 550 NISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAG 657
NI GTS AV+L CS+ PC + LID+N+ G
Sbjct: 934 NIYGTSKNKVAVNLQCSKRFPCKNIELIDINITNNG 1041
>ref|NM_127107.2| Arabidopsis thaliana polygalacturonase AT2G15470 mRNA, complete cds
Length = 1215
Score = 242 bits (522), Expect = 2e-062
Identities = 96/216 (44%), Positives = 138/216 (63%)
Frame = +1 / +1
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
N I I LNSK H N + + V ITAP D NTDG+ +G SN++I+++ IG
Sbjct: 481 NSNIKDITSLNSKMGHFNFFSVHHFNITGVTITAPGDSPNTDGIKMGSCSNIQISDTNIG 660
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVR 369
TGDDC++I G+ + ++N+ CGPG GISVG LG+ KDEKD D+ VRD + T++G+R
Sbjct: 661 TGDDCIAILSGTTNLNISNVNCGPGHGISVGSLGKNKDEKDAKDLIVRDVIFNGTSDGIR 840
Query: 370 IKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVCPGKRSNSSHVSIKDVTFR 549
IK++E + S + S+ +ENI+M +V PI IDQ +CP C +R SHV I+++ +
Sbjct: 841 IKTWESSASKILVSNFVYENIQMIDVGKPINIDQKYCPHPPCEHERKGESHVQIQNLKLK 1020
Query: 550 NISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAG 657
NI GTS A++L CS+ PC V LID+N++ G
Sbjct: 1021 NIYGTSKNKVAMNLQCSKIFPCKNVELIDINIKQNG 1128
>gb|AC013483.7|ATAC013483 Arabidopsis thaliana chromosome III BAC F17A17 genomic sequence,
complete sequence
Length = 121054
Score = 202 bits (435), Expect(2) = 9e-062
Identities = 83/163 (50%), Positives = 111/163 (68%)
Frame = +1 / -3
Query: 7 TNGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTI 186
TN I I +++K FHIN+ +K++T +V I APA+ NTDG+H+G S V I NS I
Sbjct: 51359 TNAEIRDISSIDAKNFHINVIGAKNMTFDNVKIMAPAESPNTDGIHLGRSVGVSIINSRI 51180
Query: 187 GTGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGV 366
TGDDCVS+G G ++V N+ CGPG GISVG LGRY E+DVS + V +C L+ T NG+
Sbjct: 51179 STGDDCVSVGDGMVNLLVKNVVCGPGHGISVGSLGRYGHEQDVSGIRVINCTLQETDNGL 51000
Query: 367 RIKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
RIK++ A TAS++ FENI + V+NPI+IDQ +CP C
Sbjct: 50999 RIKTWPSAACSTTASNIHFENIILRNVSNPILIDQEYCPWNQC 50871
Score = 200 bits (431), Expect(2) = 2e-061
Identities = 80/162 (49%), Positives = 110/162 (67%)
Frame = +1 / -1
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
N I I +++K FHIN+ +K++T +V + APA+ NTDG+H+G S V+I NS I
Sbjct: 53887 NAEIRDISSIDAKNFHINVLGAKNMTFDNVKVIAPAESPNTDGIHLGRSEGVKILNSKIA 53708
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVR 369
TGDDC+S+G G + V N+ CGPG GISVG LGRY E+DV+ +TV +C L+ T NG+R
Sbjct: 53707 TGDDCISVGDGMKNLHVENVMCGPGHGISVGSLGRYVHEQDVTGITVVNCTLQGTDNGLR 53528
Query: 370 IKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
IK++ A TAS + FENI + V+NPI+IDQ +CP C
Sbjct: 53527 IKTWPSAACATTASGIHFENIILNNVSNPILIDQEYCPWNQC 53402
Score = 198 bits (427), Expect(2) = 3e-062
Identities = 79/162 (48%), Positives = 111/162 (68%)
Frame = +1 / -3
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
N I I +++K FHIN+ +K++T+ ++ I AP D NTDG+H+G S V+I NS I
Sbjct: 48446 NSEIRDISSIDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGVKILNSFIS 48267
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVR 369
TGDDC+S+G G + V +TCGPG GISVG LGRY E+DVS + V +C L+ T NG+R
Sbjct: 48266 TGDDCISVGDGMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTLQETDNGLR 48087
Query: 370 IKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
IK++ A TAS + FE+I +++V+NPI+IDQ +CP C
Sbjct: 48086 IKTWPSAACSTTASDIHFEDIILKDVSNPILIDQEYCPWNQC 47961
Score = 169 bits (364), Expect(3) = 2e-057
Identities = 66/125 (52%), Positives = 90/125 (72%)
Frame = +1 / -2
Query: 7 TNGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTI 186
TN I+ I NSK FH+NI K+IT+ D+ I AP + NTDG+H+G S+ V + + I
Sbjct: 57693 TNSKINSITSTNSKLFHMNILNCKNITLSDIGIDAPPESLNTDGIHIGRSNGVNLIGAKI 57514
Query: 187 GTGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGV 366
TGDDCVSIG G++ ++V N+ CGPG GIS+G LGRY +E+ V VTVR C+++NT NGV
Sbjct: 57513 KTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGV 57334
Query: 367 RIKSY 381
RIK++
Sbjct: 57333 RIKTW 57319
Score = 114 bits (244), Expect = 4e-024
Identities = 61/148 (41%), Positives = 75/148 (50%)
Frame = -1 / +1
Query: 488 FWGQKYWSMMMGLATSSILMFSKVRWDAVSTDSASSYDLMRTPLVVFLSTQXXXXXXXXX 309
F GQ WSM +GL T ++FSK +AV +A L+ PL V Q
Sbjct: 50878 FQGQYSWSMRIGLLTFLRMIFSK*ILEAVVEQAAEGQVLILRPLSVSWRVQLMTLMPLTS 51057
Query: 308 XXXXXRPRQPTLMPCPGPQVMLFTMTPSLPGPMETQSSPVPMVELVMRTLEDPPTWTPSV 129
PR PTL+PCPGP T ++P P ETQSSPV ++EL+M T P W PSV
Sbjct: 51058 CSCPYLPRLPTLIPCPGPHTTFLTRRFTIPSPTETQSSPVEILELIMETPTLLPKWIPSV 51237
Query: 128 FSTSAGAVMFTSFTVMSLEVSMLMWKNL 45
SAGA++ T VM L LM K L
Sbjct: 51238 LGLSAGAMILTLSKVMFLAPITLM*KFL 51321
Score = 99.6 bits (211), Expect(3) = 1e-023
Identities = 49/110 (44%), Positives = 57/110 (51%)
Frame = -1 / +2
Query: 374 LMRTPLVVFLSTQXXXXXXXXXXXXXXRPRQPTLMPCPGPQVMLFTMTPSLPGPMETQSS 195
LMRTPL VFL PR P +PCPGP TM S+P PMETQSS
Sbjct: 57326 LMRTPLSVFLMRHFLTVTPFTGCSLGYLPRLPMEIPCPGPHSTFSTMRFSVPSPMETQSS 57505
Query: 194 PVPMVELVMRTLEDPPTWTPSVFSTSAGAVMFTSFTVMSLEVSMLMWKNL 45
PV + + T D P W PSV S GA + S VM L++ M MWK+L
Sbjct: 57506 PVLIFAPIKLTPLDLPMWIPSVLRLSGGASIPISERVMFLQLRMFMWKSL 57655
Score = 87.7 bits (185), Expect(2) = 2e-021
Identities = 41/82 (50%), Positives = 47/82 (57%)
Frame = -1 / +1
Query: 290 PRQPTLMPCPGPQVMLFTMTPSLPGPMETQSSPVPMVELVMRTLEDPPTWTPSVFSTSAG 111
PR PTL+PCPGP V T +P P E QSSPV M EL + T P W PSV S+G
Sbjct: 48166 PRLPTLIPCPGPHVTFST*RFFIPSPTEIQSSPVEMKELRILTPSLLPKWIPSVLGLSSG 48345
Query: 110 AVMFTSFTVMSLEVSMLMWKNL 45
A + F VM L + LMWK L
Sbjct: 48346 ATILMLFMVMFLAPNTLMWKFL 48411
Score = 73.5 bits (154), Expect(3) = 2e-057
Identities = 29/72 (40%), Positives = 42/72 (58%)
Frame = +1 / -1
Query: 517 SHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNAK 696
S V + DVT + I GTS+T AV L+CS+ PC+ ++L D+N+ + GK ++ CSN K
Sbjct: 57085 SQVKLSDVTIKGIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIK 56906
Query: 697 GTAKGSLQALDC 732
G L C
Sbjct: 56905 PILSGKLVPAAC 56870
Score = 68.4 bits (143), Expect(2) = 2e-061
Identities = 26/72 (36%), Positives = 41/72 (56%)
Frame = +1 / -3
Query: 517 SHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNAK 696
S + + D++F+NI GTS +AV LLCS+ PC+ V + ++N+EY G + +CSN
Sbjct: 53183 STIKLVDISFKNIRGTSGNKDAVKLLCSKAHPCANVEIGNINLEYKGADGPPTFMCSNVS 53004
Query: 697 GTAKGSLQALDC 732
G+ C
Sbjct: 53003 PKLVGTQNPKAC 52968
Score = 68.0 bits (142), Expect(2) = 9e-062
Identities = 25/67 (37%), Positives = 40/67 (59%)
Frame = +1 / -3
Query: 514 SSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNA 693
SS + + +++FR I GTS +AV LLCS+ PC V + D+N++Y G + +CSN
Sbjct: 50735 SSSIKLANISFRRIRGTSGNKDAVKLLCSKGYPCENVQVGDINIQYTGADGPATFMCSNV 50556
Query: 694 KGTAKGS 714
+ G+
Sbjct: 50555 RPKLVGT 50535
Score = 63.4 bits (132), Expect(2) = 3e-062
Identities = 25/73 (34%), Positives = 40/73 (54%)
Frame = +1 / -1
Query: 514 SSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNA 693
+S + + +++F+NI GTS +AV LLCS+ PC V + D++++Y G + CSN
Sbjct: 47863 ASTIKLVNISFKNIRGTSGNKDAVKLLCSKGYPCQNVEIGDIDIKYNGADGPATFHCSNV 47684
Query: 694 KGTAKGSLQALDC 732
GS C
Sbjct: 47683 SPKILGSQSPKAC 47645
Score = 62.0 bits (129), Expect(5) = 3e-031
Identities = 26/70 (37%), Positives = 42/70 (60%)
Frame = +1 / +3
Query: 517 SHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNAK 696
S V + +V ++NI GTSS P AV +CS+ PC G+S+ +V + + + + A CSN K
Sbjct: 94182 SAVQVSNVLYKNIQGTSSRPIAVKFVCSKNIPCRGISMQNVKLVDQTQQDVSKASCSNVK 94361
Query: 697 GTAKGSLQAL 726
+G++ L
Sbjct: 94362 LDTRGNVSPL 94391
Score = 61.6 bits (128), Expect(5) = 3e-031
Identities = 23/62 (37%), Positives = 39/62 (62%)
Frame = +1 / +3
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
N +S I+L N++ H+ K++ ++ +T+PAD NTDG+HV G+ N+ I +S +
Sbjct: 93018 NLRVSNIRLENAQQMHLTFQDCKNVKALNLMVTSPADSPNTDGIHVSGTQNILIQDSIVR 93197
Query: 190 TG 195
TG
Sbjct: 93198 TG 93203
Score = 46.9 bits (96), Expect(5) = 3e-031
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = +1 / +1
Query: 193 GDDCVSIGPGSDGVMVNNITCGPGQGI 273
GDDC+SI GS+ V ITCGPG GI
Sbjct: 93343 GDDCISIVSGSENVRATGITCGPGHGI 93423
Score = 40.5 bits (82), Expect(5) = 3e-031
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +1 / +3
Query: 274 SVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVRIKSYE 384
S+G LG E VS+V V L TTNGVRIK+++
Sbjct: 93756 SIGSLGEDNSEAYVSNVVVNKATLIGTTNGVRIKTWQ 93866
Score = 40.0 bits (81), Expect(3) = 2e-057
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +1 / -2
Query: 406 ASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
AS++ FE+I M+ V+ P++IDQ +CP C
Sbjct: 57297 ASNILFEDITMDNVSLPVLIDQEYCPYGHC 57208
Score = 38.6 bits (78), Expect(3) = 1e-023
Identities = 20/46 (43%), Positives = 27/46 (58%)
Frame = -1 / +3
Query: 488 FWGQKYWSMMMGLATSSILMFSKVRWDAVSTDSASSYDLMRTPLVV 351
F GQ WSM +GL T +MFSK +AV +A + L+ +PL V
Sbjct: 53409 FQGQYSWSMRIGLLTLLRMMFSK*IPEAVVAQAADGHVLILSPLSV 53546
Score = 37.3 bits (75), Expect(2) = 2e-021
Identities = 20/46 (43%), Positives = 26/46 (56%)
Frame = -1 / +1
Query: 488 FWGQKYWSMMMGLATSSILMFSKVRWDAVSTDSASSYDLMRTPLVV 351
F GQ WSM +GL TS ++ SK DAV +A + L+ PL V
Sbjct: 47968 FQGQYSWSMRIGLLTSLRIISSK*ISDAVVEQAAEGHVLILNPLSV 48105
Score = 33.1 bits (66), Expect(5) = 3e-031
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +1 / +1
Query: 406 ASHLTFENIRMEEVANPIIIDQYFC 480
A ++ F++I M+ V NPIII+Q +C
Sbjct: 93973 AKNIIFQDIIMKNVTNPIIINQDYC 94047
Score = 30.4 bits (60), Expect(3) = 1e-023
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = -1 / +1
Query: 656 PAYSTLTSMSETPLHGCVSEQSRLTASGVDDVPEMLRKVTS 534
P YS L T HGC + TAS DVP + K+ S
Sbjct: 53044 PLYSRLMFPISTFAHGCALLHNSFTASLFPDVPLIFLKLMS 53166
>emb|AJ003135.1|ATAJ3135 Arabidopsis thaliana PGA5 gene, complete CDS
Length = 2556
Score = 198 bits (426), Expect(2) = 4e-062
Identities = 78/162 (48%), Positives = 111/162 (68%)
Frame = +1 / +3
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
N I I +++K FHIN+ +K++T+ ++ I AP D NTDG+H+G S ++I NS I
Sbjct: 1572 NSEIRDISSIDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGIKILNSFIS 1751
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVR 369
TGDDC+S+G G + V +TCGPG GISVG LGRY E+DVS + V +C L+ T NG+R
Sbjct: 1752 TGDDCISVGDGMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTLQETDNGLR 1931
Query: 370 IKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
IK++ A TAS + FE+I +++V+NPI+IDQ +CP C
Sbjct: 1932 IKTWPSAACSTTASDIHFEDIILKDVSNPILIDQEYCPWNQC 2057
Score = 63.4 bits (132), Expect(2) = 4e-062
Identities = 25/73 (34%), Positives = 40/73 (54%)
Frame = +1 / +1
Query: 514 SSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNA 693
+S + + +++F+NI GTS +AV LLCS+ PC V + D++++Y G + CSN
Sbjct: 2155 ASTIKLVNISFKNIRGTSGNKDAVKLLCSKGYPCQNVEIGDIDIKYNGADGPATFHCSNV 2334
Query: 694 KGTAKGSLQALDC 732
GS C
Sbjct: 2335 SPKILGSQSPKAC 2373
>emb|BX823174.1|CNS0A74O Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB95ZD09 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1329
Score = 199 bits (429), Expect(2) = 4e-062
Identities = 79/169 (46%), Positives = 116/169 (68%)
Frame = +1 / +2
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
N I I +++K FHIN+ +K++T+ ++ I AP D NTDG+H+G S V+I NS I
Sbjct: 494 NSEIRDISSIDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGVKILNSFIS 673
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVR 369
TGDDC+S+G G + V +TCGPG GISVG LGRY E+DVS + V +C L+ T NG+R
Sbjct: 674 TGDDCISVGDGMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTLQETDNGLR 853
Query: 370 IKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVCPGKRSNS 516
IK++ A TAS + FE+I +++V+NPI+IDQ +CP C +++++
Sbjct: 854 IKTWPSAACSTTASDIHFEDIILKDVSNPILIDQEYCPWNQCNKQKAST 1000
Score = 87.7 bits (185), Expect(3) = 9e-023
Identities = 41/82 (50%), Positives = 47/82 (57%)
Frame = -1 / -1
Query: 290 PRQPTLMPCPGPQVMLFTMTPSLPGPMETQSSPVPMVELVMRTLEDPPTWTPSVFSTSAG 111
PR PTL+PCPGP V T +P P E QSSPV M EL + T P W PSV S+G
Sbjct: 774 PRLPTLIPCPGPHVTFST*RFFIPSPTEIQSSPVEMKELRILTPSLLPKWIPSVLGLSSG 595
Query: 110 AVMFTSFTVMSLEVSMLMWKNL 45
A + F VM L + LMWK L
Sbjct: 594 ATILMLFMVMFLAPNTLMWKFL 529
Score = 62.0 bits (129), Expect(2) = 4e-062
Identities = 24/76 (31%), Positives = 40/76 (52%)
Frame = +1 / +2
Query: 505 RSNSSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVC 684
+ +S + + +++F+NI GT +AV LLCS+ PC V + D++++Y G + C
Sbjct: 983 KQKASTIKLVNISFKNIRGTPGNKDAVKLLCSKGYPCQNVEIGDIDIKYNGADGPATFHC 1162
Query: 685 SNAKGTAKGSLQALDC 732
SN GS C
Sbjct: 1163 SNVSPKILGSQSPKAC 1210
Score = 37.3 bits (75), Expect(3) = 9e-023
Identities = 20/46 (43%), Positives = 26/46 (56%)
Frame = -1 / -1
Query: 488 FWGQKYWSMMMGLATSSILMFSKVRWDAVSTDSASSYDLMRTPLVV 351
F GQ WSM +GL TS ++ SK DAV +A + L+ PL V
Sbjct: 972 FQGQYSWSMRIGLLTSLRIISSK*ISDAVVEQAAEGHVLILNPLSV 835
Score = 22.1 bits (42), Expect(3) = 9e-023
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = -1 / -1
Query: 656 PAYSTLTSMSETPLHGCVSEQSRLTASGVDDVPEMLRKV 540
P Y S T HG QS TAS VP M K+
Sbjct: 1134 PLYLISMSPISTFWHGYPLLQSSFTASLFPGVPLMFLKL 1018
>emb|BX822574.1|CNS0A73L Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB4ZD01 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1339
Score = 202 bits (435), Expect(2) = 1e-061
Identities = 84/170 (49%), Positives = 115/170 (67%)
Frame = +1 / +3
Query: 7 TNGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTI 186
TN I I +++K FHIN+ +K++T +V I APA+ NTDG+H+G S V I NS I
Sbjct: 507 TNAEIRDISSIDAKNFHINVIGAKNMTFDNVKIMAPAESPNTDGIHLGRSVGVSIINSRI 686
Query: 187 GTGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGV 366
TGDDCVS+G G ++V N+ CGPG GISVG LGRY E+DVS + V +C + T NG+
Sbjct: 687 STGDDCVSVGDGMVNLLVKNVVCGPGHGISVGSLGRYGHEQDVSGIRVINCTPQETDNGL 866
Query: 367 RIKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVCPGKRSNS 516
RIK++ A TAS++ FENI + V+NPI+IDQ +CP C ++S+S
Sbjct: 867 RIKTWPSAACSTTASNIHFENIILRNVSNPILIDQEYCPWNQCYKQKSSS 1016
Score = 115 bits (245), Expect(2) = 3e-026
Identities = 61/148 (41%), Positives = 75/148 (50%)
Frame = -1 / -1
Query: 488 FWGQKYWSMMMGLATSSILMFSKVRWDAVSTDSASSYDLMRTPLVVFLSTQXXXXXXXXX 309
F GQ WSM +GL T ++FSK +AV +A L+ PL V Q
Sbjct: 988 FQGQYSWSMRIGLLTFLRMIFSK*ILEAVVEQAAEGQVLILRPLSVSWGVQLMTLMPLTS 809
Query: 308 XXXXXRPRQPTLMPCPGPQVMLFTMTPSLPGPMETQSSPVPMVELVMRTLEDPPTWTPSV 129
PR PTL+PCPGP T ++P P ETQSSPV ++EL+M T P W PSV
Sbjct: 808 CSCPYLPRLPTLIPCPGPHTTFLTRRFTIPSPTETQSSPVEILELIMETPTLLPKWIPSV 629
Query: 128 FSTSAGAVMFTSFTVMSLEVSMLMWKNL 45
SAGA++ T VM L LM K L
Sbjct: 628 LGLSAGAMILTLSKVMFLAPITLM*KFL 545
Score = 57.4 bits (119), Expect(2) = 1e-061
Identities = 23/70 (32%), Positives = 37/70 (52%)
Frame = +1 / +3
Query: 505 RSNSSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVC 684
+ SS + + D+ FR I GTS +AV LLC + PC V + D+N++ G + +
Sbjct: 999 KQKSSSIKLADICFRRIRGTSGKKDAVKLLCGKGYPCENVQVGDINIQ*IGADGPATFMW 1178
Query: 685 SNAKGTAKGS 714
SN + G+
Sbjct: 1179 SNVRPKLVGT 1208
Score = 26.3 bits (51), Expect(2) = 3e-026
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = -1 / -1
Query: 713 LPLAVPLALLHTAMVLLFLPAYSTLTSMSETPLHGCVSEQSRLTASGVDDVPEMLRK 543
+P ++ L H + P Y L S + T HG + TAS DVP +L K
Sbjct: 1207 VPTSLGLTFDHMKVAGPSAPIY*ILMSPT*TFSHGYPLPHNNFTASFFPDVPLILLK 1037
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 177 bits (382), Expect(2) = 1e-060
Identities = 72/162 (44%), Positives = 108/162 (66%)
Frame = +1 / +2
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
N +++GI LNSK H N + ++ VNI AP++ NTDG+ + SSN++I+N+ I
Sbjct: 5866499 NSSMNGITSLNSKAGHFNFLSVDHFSITRVNIIAPSNSPNTDGIKIALSSNMQISNTHIS 5866678
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVR 369
TGDDC+++ G+ + N+ CGPG GIS+G LG+ KDEK+V+ + VR+ V TTNG+R
Sbjct: 5866679 TGDDCIAMLSGNTNFDIYNVKCGPGHGISIGSLGKNKDEKNVNGLMVRNSVFTGTTNGIR 5866858
Query: 370 IKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
IK++E + S + +L +EN++M V NPI IDQ +CP C
Sbjct: 5866859 IKTWESSASTIRIINLVYENLQMINVENPIGIDQKYCPYPPC 5866984
Score = 159 bits (341), Expect(3) = 2e-056
Identities = 59/124 (47%), Positives = 91/124 (73%)
Frame = +1 / -2
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
N I+GI +N+K FH+ + ++++ ++++ +TAPA+ NTDG+H+ + NV I +STI
Sbjct: 611564 NVEINGISSVNAKAFHMFLVKTENVNIQNIKLTAPAESPNTDGIHLSNADNVSILDSTIA 611385
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVR 369
TGDDCVS+G GS+ V V + CGPG G+SVG LG+YK+E+DVS + V +C + T NG+R
Sbjct: 611384 TGDDCVSVGRGSNNVTVERVICGPGHGLSVGSLGKYKNEEDVSGIHVNNCTMIETDNGLR 611205
Query: 370 IKSY 381
IK++
Sbjct: 611204 IKTW 611193
Score = 104 bits (221), Expect(4) = 7e-031
Identities = 37/85 (43%), Positives = 58/85 (68%)
Frame = +1 / -2
Query: 19 ISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIGTGD 198
ISG+K +NS+ H+ ++ ++ V++V + AP + NTDG HV S+ V T ST+ TGD
Sbjct: 1695128 ISGVKSMNSQVTHMTLNGCTNVVVRNVKLVAPGNSPNTDGFHVQHSTGVTFTGSTVQTGD 1694949
Query: 199 DCVSIGPGSDGVMVNNITCGPGQGI 273
DCV+IGPG+ +++ + CGPG G+
Sbjct: 1694948 DCVAIGPGTRNLLITKLACGPGHGV 1694874
Score = 97.7 bits (207), Expect(3) = 2e-026
Identities = 35/85 (41%), Positives = 57/85 (67%)
Frame = +1 / -2
Query: 19 ISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIGTGD 198
ISG+K +NS+ H+ ++ ++ V+++ + AP D NTDG V S+ V +T ST+ TGD
Sbjct: 1691111 ISGVKSMNSQVSHMTLNGCTNVAVRNIRLVAPGDSPNTDGFTVQFSTGVTLTGSTVQTGD 1690932
Query: 199 DCVSIGPGSDGVMVNNITCGPGQGI 273
DCV+IG G+ +++ + CGPG G+
Sbjct: 1690931 DCVAIGQGTRNFLISKLACGPGHGV 1690857
Score = 87.2 bits (184), Expect(4) = 3e-030
Identities = 33/64 (51%), Positives = 45/64 (70%)
Frame = +1 / -1
Query: 193 GDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVRI 372
GDDC+SI G V V+N+ CGPG GIS+G LG+ + VS++TVRD + NT GVRI
Sbjct: 3515883 GDDCISIQTGCSNVFVHNVNCGPGHGISIGSLGKEGTKACVSNITVRDVAMHNTMTGVRI 3515704
Query: 373 KSYE 384
K+++
Sbjct: 3515703 KTWQ 3515692
Score = 78.5 bits (165), Expect(2) = 1e-060
Identities = 33/76 (43%), Positives = 45/76 (59%)
Frame = +1 / +3
Query: 517 SHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNAK 696
SH+ I++VT +NI GTS AV CS+T PC V LID+N+ + G + A+C N
Sbjct: 5867088 SHIQIRNVTLKNIWGTSKNKVAVKFQCSKTFPCKDVQLIDINLTHHGVDGPASALCENVD 5867267
Query: 697 GTAKGSLQALDCLV*S 744
G+A G + CL *S
Sbjct: 5867268 GSATGKMVPPHCLS*S 5867315
Score = 68.4 bits (143), Expect(3) = 2e-056
Identities = 23/48 (47%), Positives = 37/48 (77%)
Frame = +1 / -2
Query: 517 SHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGK 660
S V+I D+ F+NI GT+ T + V ++CS++ PC GV+++DVN++Y GK
Sbjct: 610991 SQVAISDILFKNIRGTTITKDVVQIMCSKSVPCQGVNVVDVNLDYVGK 610848
Score = 61.6 bits (128), Expect(4) = 3e-030
Identities = 22/45 (48%), Positives = 34/45 (75%)
Frame = +1 / -3
Query: 517 SHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEY 651
S V I VT++NI GTS+T EA+ L+CS++ PC+G++L D+ + Y
Sbjct: 1694386 SGVKISQVTYKNIQGTSATQEAMKLVCSKSSPCTGITLQDIKLTY 1694252
Score = 61.1 bits (127), Expect(4) = 7e-031
Identities = 22/45 (48%), Positives = 34/45 (75%)
Frame = +1 / -2
Query: 517 SHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEY 651
S V I VT++NI GTS+T EA+ L+CS++ PC+G++L D+ + Y
Sbjct: 1690364 SGVKITQVTYKNIQGTSATQEAMKLVCSKSNPCTGITLQDIKLTY 1690230
Score = 57.9 bits (120), Expect(4) = 3e-028
Identities = 23/59 (38%), Positives = 37/59 (62%)
Frame = +1 / +2
Query: 19 ISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIGTG 195
+SG+ + NS+ + I S + V V +++P D NTDG+H+ GS+NV + + IGTG
Sbjct: 8328245 VSGLTIQNSQQMNFIIARSDSVRVSKVMVSSPGDSPNTDGIHITGSTNVILQDCKIGTG 8328421
Score = 53.3 bits (110), Expect(4) = 3e-030
Identities = 19/60 (31%), Positives = 36/60 (60%)
Frame = +1 / -1
Query: 19 ISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIGTGD 198
++GI + NS H+ D + V D+ +++P D NTDG+H+ + +V I ++T+ G+
Sbjct: 3516135 VTGITIQNSPQCHLKFDDCVGVVVHDIAVSSPGDSPNTDGIHLQNTKDVLIHSTTLACGN 3515956
Score = 49.2 bits (101), Expect(3) = 2e-026
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +1 / -2
Query: 403 TASHLTFENIRMEEVANPIIIDQYFCPQKVCPGKRS 510
+ S +TF NI ++ V NPIIIDQY+C K C K S
Sbjct: 505346 SVSGVTFNNIHVDSVRNPIIIDQYYCMTKDCANKTS 505239
Score = 45.1 bits (92), Expect(3) = 2e-026
Identities = 17/37 (45%), Positives = 27/37 (72%)
Frame = +1 / -2
Query: 274 SVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVRIKSYE 384
S+G LG + VS++TVRD V++ + NGVRIK+++
Sbjct: 505469 SIGSLGNHNSRACVSNITVRDSVIKYSDNGVRIKTWQ 505359
Score = 45.1 bits (92), Expect(4) = 3e-028
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = +1 / +3
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGI 273
TGDDCVSI S + + NI CGPG GI
Sbjct: 8328507 TGDDCVSIVNASSNIKMKNIYCGPGHGI 8328590
Score = 40.0 bits (81), Expect(4) = 3e-028
Identities = 12/22 (54%), Positives = 19/22 (86%)
Frame = +1 / +2
Query: 415 LTFENIRMEEVANPIIIDQYFC 480
+ F N+ M++VANPI+IDQ++C
Sbjct: 8328887 IRFTNVEMQDVANPILIDQFYC 8328952
Score = 39.6 bits (80), Expect(4) = 3e-028
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +1 / +2
Query: 262 GQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVRIKSYE 384
G S+G LG+ V+ V + +LR TTNG+RIK+Y+
Sbjct: 8328647 GISCSIGSLGKDNTTGIVTQVVLDTALLRETTNGLRIKTYQ 8328769
Score = 36.8 bits (74), Expect(4) = 7e-031
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +1 / -3
Query: 421 FENIRMEEVANPIIIDQYFCP 483
F+N+ M V NPIIIDQ +CP
Sbjct: 1690564 FQNLIMRNVQNPIIIDQNYCP 1690502
Score = 36.8 bits (74), Expect(4) = 7e-031
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +1 / -3
Query: 274 SVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVRIKSY 381
S+G L + +E V +VTV V + NGVRIKS+
Sbjct: 1690708 SIGSLAKQLNEDGVENVTVSSSVFTGSQNGVRIKSW 1690601
Score = 35.0 bits (70), Expect(4) = 3e-030
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +1 / -2
Query: 421 FENIRMEEVANPIIIDQYFCP 483
F+++ M+ V NPIIIDQ +CP
Sbjct: 1694582 FQDLVMKNVENPIIIDQNYCP 1694520
Score = 33.6 bits (67), Expect(3) = 2e-056
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +1 / -2
Query: 406 ASHLTFENIRMEEVANPIIIDQYF 477
A + FENI M+ V NPIIIDQ +
Sbjct: 611171 AVDIKFENIIMQSVKNPIIIDQNY 611100
>gb|AC007651.2| Arabidopsis thaliana chromosome I BAC F20D23 genomic sequence, complete
sequence
Length = 114935
Score = 177 bits (382), Expect(2) = 1e-060
Identities = 72/162 (44%), Positives = 108/162 (66%)
Frame = +1 / -2
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
N +++GI LNSK H N + ++ VNI AP++ NTDG+ + SSN++I+N+ I
Sbjct: 56755 NSSMNGITSLNSKAGHFNFLSVDHFSITRVNIIAPSNSPNTDGIKIALSSNMQISNTHIS 56576
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVR 369
TGDDC+++ G+ + N+ CGPG GIS+G LG+ KDEK+V+ + VR+ V TTNG+R
Sbjct: 56575 TGDDCIAMLSGNTNFDIYNVKCGPGHGISIGSLGKNKDEKNVNGLMVRNSVFTGTTNGIR 56396
Query: 370 IKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
IK++E + S + +L +EN++M V NPI IDQ +CP C
Sbjct: 56395 IKTWESSASTIRIINLVYENLQMINVENPIGIDQKYCPYPPC 56270
Score = 78.5 bits (165), Expect(2) = 1e-060
Identities = 33/76 (43%), Positives = 45/76 (59%)
Frame = +1 / -3
Query: 517 SHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNAK 696
SH+ I++VT +NI GTS AV CS+T PC V LID+N+ + G + A+C N
Sbjct: 56166 SHIQIRNVTLKNIWGTSKNKVAVKFQCSKTFPCKDVQLIDINLTHHGVDGPASALCENVD 55987
Query: 697 GTAKGSLQALDCLV*S 744
G+A G + CL *S
Sbjct: 55986 GSATGKMVPPHCLS*S 55939
>ref|NM_101576.1| Arabidopsis thaliana polygalacturonase AT1G17150 mRNA, complete cds
Length = 1209
Score = 177 bits (382), Expect(2) = 1e-060
Identities = 72/162 (44%), Positives = 108/162 (66%)
Frame = +1 / +1
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
N +++GI LNSK H N + ++ VNI AP++ NTDG+ + SSN++I+N+ I
Sbjct: 484 NSSMNGITSLNSKAGHFNFLSVDHFSITRVNIIAPSNSPNTDGIKIALSSNMQISNTHIS 663
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVR 369
TGDDC+++ G+ + N+ CGPG GIS+G LG+ KDEK+V+ + VR+ V TTNG+R
Sbjct: 664 TGDDCIAMLSGNTNFDIYNVKCGPGHGISIGSLGKNKDEKNVNGLMVRNSVFTGTTNGIR 843
Query: 370 IKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
IK++E + S + +L +EN++M V NPI IDQ +CP C
Sbjct: 844 IKTWESSASTIRIINLVYENLQMINVENPIGIDQKYCPYPPC 969
Score = 78.5 bits (165), Expect(2) = 1e-060
Identities = 32/80 (40%), Positives = 44/80 (55%)
Frame = +1 / +1
Query: 496 PGKRSNSSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTM 675
P SH+ I++VT +NI GTS AV CS+T PC V LID+N+ + G +
Sbjct: 964 PCSNMGDSHIQIRNVTLKNIWGTSKNKVAVKFQCSKTFPCKDVQLIDINLTHHGVDGPAS 1143
Query: 676 AVCSNAKGTAKGSLQALDCL 735
A+C N G+A G + CL
Sbjct: 1144 ALCENVDGSATGKMVPPHCL 1203
>ref|NM_128219.1| Arabidopsis thaliana polygalacturonase AT2G26620 mRNA, complete cds
Length = 1209
Score = 193 bits (416), Expect(2) = 4e-060
Identities = 78/168 (46%), Positives = 109/168 (64%)
Frame = +1 / +1
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
N I I LNSK H N + V ITAP+D NTDG+ +G SN++I+N+ IG
Sbjct: 481 NSNIKDITSLNSKMGHFNFFFVHHFNITGVTITAPSDSPNTDGIKMGSCSNIQISNTNIG 660
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVR 369
TGDDC++I G+ + ++NI CGPG GISVG LG+ KDEKDV D+ VRD + T++G+R
Sbjct: 661 TGDDCIAILSGTTKLNISNINCGPGHGISVGSLGKNKDEKDVKDLFVRDVIFNGTSDGIR 840
Query: 370 IKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVCPGKRSN 513
IK++E + S + S+ +ENI+M +V PI IDQ +CP C +R +
Sbjct: 841 IKTWESSASKILVSNFVYENIQMIDVGKPINIDQKYCPHPPCEHERKS 984
Score = 61.1 bits (127), Expect(2) = 4e-060
Identities = 24/54 (44%), Positives = 34/54 (62%)
Frame = +1 / +1
Query: 496 PGKRSNSSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAG 657
P + SHV I+D+ +NI GTS AV+L CS++ PC V LID+N++ G
Sbjct: 961 PCEHERKSHVQIQDLKLKNIYGTSKNKVAVNLQCSKSFPCKNVELIDINIKQNG 1122
>gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom arm complete sequence
Length = 14668883
Score = 192 bits (413), Expect(2) = 1e-059
Identities = 78/162 (48%), Positives = 105/162 (64%)
Frame = +1 / -2
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
N I I LNSK H N + + V ITAP D NTDG+ +G SN+ I+N+ IG
Sbjct: 704473 NSRIKDITSLNSKMGHFNFFSVHRFNITGVTITAPGDSPNTDGIKMGSCSNIHISNTNIG 704294
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVR 369
TGDDC++I G+ + ++N+ CGPG GISVG LG+ KDEKDV +TVRD V T++G+R
Sbjct: 704293 TGDDCIAILSGTTNLDISNVKCGPGHGISVGSLGKNKDEKDVKHLTVRDTVFNGTSDGIR 704114
Query: 370 IKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
IK++E + S L S+ +ENI+M +V PI IDQ +CP C
Sbjct: 704113 IKTWESSASKLVVSNFIYENIQMIDVGKPINIDQKYCPHPPC 703988
Score = 192 bits (413), Expect(2) = 1e-059
Identities = 78/162 (48%), Positives = 105/162 (64%)
Frame = +1 / -1
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
N I I LNSK H N + + V ITAP D NTDG+ +G SN+ I+N+ IG
Sbjct: 707795 NSRIKDITSLNSKMGHFNFFSVHRFNITGVTITAPGDSPNTDGIKMGSCSNIHISNTNIG 707616
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVR 369
TGDDC++I G+ + ++N+ CGPG GISVG LG+ KDEKDV +TVRD V T++G+R
Sbjct: 707615 TGDDCIAILSGTTNLDISNVKCGPGHGISVGSLGKNKDEKDVKHLTVRDTVFNGTSDGIR 707436
Query: 370 IKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
IK++E + S L S+ +ENI+M +V PI IDQ +CP C
Sbjct: 707435 IKTWESSASKLVVSNFIYENIQMIDVGKPINIDQKYCPHPPC 707310
Score = 191 bits (412), Expect(2) = 2e-059
Identities = 78/162 (48%), Positives = 105/162 (64%)
Frame = +1 / -3
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
N I I LNSK H N + + V ITAP D NTDG+ +G SN+ I+N+ IG
Sbjct: 701151 NSRIKDITSLNSKMGHFNFFSVHRFNITGVTITAPGDSPNTDGIKMGSCSNIHISNTNIG 700972
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVR 369
TGDDC++I G+ + ++NI CGPG GISVG LG+ KDEKDV +TVRD V T++G+R
Sbjct: 700971 TGDDCIAILSGTTNLDISNIKCGPGHGISVGSLGKNKDEKDVKHLTVRDTVFNGTSDGIR 700792
Query: 370 IKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
IK++E + S + S+ +ENI+M +V PI IDQ +CP C
Sbjct: 700791 IKTWESSASKIVVSNFIYENIQMIDVGKPINIDQKYCPHPPC 700666
Score = 188 bits (406), Expect(2) = 2e-053
Identities = 76/162 (46%), Positives = 105/162 (64%)
Frame = +1 / -2
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
N + I LNSK H N + + V ITAP D NTDG+ +G SN+ I+N+ IG
Sbjct: 711136 NSRMKDITSLNSKMGHFNFFSVHRFNITGVTITAPGDSPNTDGIKMGSCSNIHISNTNIG 710957
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVR 369
TGDDC++I G+ + ++N+ CGPG GISVG LG+ KDEKDV +TVRD V T++G+R
Sbjct: 710956 TGDDCIAILSGTTNLDISNVKCGPGHGISVGRLGKNKDEKDVKHLTVRDTVFNGTSDGIR 710777
Query: 370 IKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
IK++E + S + S+ +ENI+M +V PI IDQ +CP C
Sbjct: 710776 IKTWESSASKIVVSNFIYENIQMIDVGKPINIDQKYCPHPPC 710651
Score = 165 bits (354), Expect(2) = 1e-055
Identities = 66/159 (41%), Positives = 101/159 (63%)
Frame = +1 / -1
Query: 19 ISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIGTGD 198
++ IK +NSK H+N + + + VNI AP D NTDG+ +G S++++I + I TGD
Sbjct: 13740284 LTRIKSINSKMGHLNFFSVQHFDITRVNIKAPGDSPNTDGIKIGSSNHMKIHHVDIATGD 13740105
Query: 199 DCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVRIKS 378
DC++I G+ + +N + CGPG GISVG LG++K EK V + VR+ + T+NGVRIK+
Sbjct: 13740104 DCIAILSGTFNLDINKVNCGPGHGISVGSLGKFKGEKSVQGLIVRNSIFNGTSNGVRIKT 13739925
Query: 379 YEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
+ S+ F+N++M +V +PI IDQ +CP C
Sbjct: 13739924 WPSPGEPNLVSNFLFKNLQMIDVQSPINIDQRYCPNPPC 13739808
Score = 152 bits (327), Expect(3) = 3e-041
Identities = 60/124 (48%), Positives = 89/124 (71%)
Frame = +1 / -1
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
N I G+ LNS+ FHI I+ ++I ++DV I AP + NTDG+H+ S+++ + N++I
Sbjct: 8616335 NVKIKGVLSLNSQLFHIAINRCRNIKIEDVRIIAPDESPNTDGIHIQLSTDIEVRNASIK 8616156
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVR 369
TGDDC+SIGPG+ +MV+ ITCGPG GIS+G L + +E+ V +VTV++ V T NG+R
Sbjct: 8616155 TGDDCISIGPGTKNLMVDGITCGPGHGISIGSLAKSIEEQGVENVTVKNAVFVRTDNGLR 8615976
Query: 370 IKSY 381
IKS+
Sbjct: 8615975 IKSW 8615964
Score = 150 bits (322), Expect(2) = 5e-037
Identities = 58/126 (46%), Positives = 85/126 (67%)
Frame = +1 / -3
Query: 118 DVENTDGVHVGGSSNVRITNSTIGTGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRY 297
D NTD + +G SN+ I+N+ IGT DDC+ I G+ + ++N+ CG GISVG LG+
Sbjct: 672885 DSPNTDSIKMGSCSNIHISNTNIGTRDDCIVILSGTTNLDISNVKCGSVHGISVGSLGKN 672706
Query: 298 KDEKDVSDVTVRDCVLRNTTNGVRIKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYF 477
KDEKDV +TVRD V T++G+RIK++E + S++ ++ +ENI+M +V PI IDQ +
Sbjct: 672705 KDEKDVKHLTVRDTVFNGTSDGIRIKTWESSASIIVVTNFIYENIQMIDVGKPINIDQKY 672526
Query: 478 CPQKVC 495
CP C
Sbjct: 672525 CPHPPC 672508
Score = 89.0 bits (188), Expect(3) = 6e-034
Identities = 34/64 (53%), Positives = 46/64 (71%)
Frame = +1 / -1
Query: 193 GDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVRI 372
GDDC+SI G V V+N+ CGPG GIS+G LG+ + VS++TVRD V+ NT GVRI
Sbjct: 6556415 GDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDSTKACVSNITVRDVVMHNTMTGVRI 6556236
Query: 373 KSYE 384
K+++
Sbjct: 6556235 KTWQ 6556224
Score = 74.4 bits (156), Expect(2) = 1e-055
Identities = 30/76 (39%), Positives = 44/76 (57%)
Frame = +1 / -1
Query: 517 SHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNAK 696
S + I+DV F+NI GTS+ EAV L CS+ PC V L ++N+ + G++ +VC N
Sbjct: 13739717 SKIQIRDVKFQNIWGTSTAKEAVKLQCSKNVPCKNVQLFNINIVHRGRDGPATSVCENVG 13739538
Query: 697 GTAKGSLQALDCLV*S 744
G G + C+ *S
Sbjct: 13739537 GWIGGKISPPSCIR*S 13739490
Score = 68.0 bits (142), Expect(5) = 6e-044
Identities = 25/85 (29%), Positives = 53/85 (62%)
Frame = +1 / -3
Query: 481 PQKVCPGKRSNSSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGK 660
P+K+ ++ +S +SI++++F ++ GTS++ EA+ + CS++ PC + L D+++E +
Sbjct: 14395176 PEKLSKTQKLQTSAISIENISFVHVRGTSASKEAIKISCSDSSPCRNILLQDIDLEPSNG 14394997
Query: 661 NNKTMAVCSNAKGTAKGSLQALDCL 735
+ T + C A G++ G + CL
Sbjct: 14394996 DGFTESFCWEAYGSSSGQVYPPPCL 14394922
Score = 67.0 bits (140), Expect(5) = 5e-022
Identities = 27/59 (45%), Positives = 34/59 (57%)
Frame = +1 / -3
Query: 19 ISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIGTG 195
I GI +NS FH+ D D+ V V I APA NTDG+H+ + NV+I NS I G
Sbjct: 5618622 IQGINFMNSAQFHVRFDNCSDVVVDSVIIKAPASSPNTDGIHIENTHNVQIRNSMISNG 5618446
Score = 60.6 bits (126), Expect(2) = 2e-059
Identities = 23/47 (48%), Positives = 34/47 (72%)
Frame = +1 / -2
Query: 517 SHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAG 657
SHV I+D+ +NI GTS+ AV+L CS++ PC V LID+N+++ G
Sbjct: 700552 SHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCKNVELIDINLKHTG 700412
Score = 60.6 bits (126), Expect(2) = 1e-059
Identities = 23/47 (48%), Positives = 34/47 (72%)
Frame = +1 / -1
Query: 517 SHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAG 657
SHV I+D+ +NI GTS+ AV+L CS++ PC V LID+N+++ G
Sbjct: 703874 SHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCKNVELIDINLKHTG 703734
Score = 60.6 bits (126), Expect(2) = 1e-059
Identities = 23/47 (48%), Positives = 34/47 (72%)
Frame = +1 / -3
Query: 517 SHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAG 657
SHV I+D+ +NI GTS+ AV+L CS++ PC V LID+N+++ G
Sbjct: 707196 SHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCKNVELIDINLKHTG 707056
Score = 60.2 bits (125), Expect(2) = 2e-053
Identities = 23/47 (48%), Positives = 33/47 (70%)
Frame = +1 / -1
Query: 517 SHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAG 657
SHV I+D+ +NI GTS AV+L CS++ PC V LID+N+++ G
Sbjct: 672395 SHVQIQDIKLKNIYGTSKNIMAVNLQCSKSFPCKNVELIDINLKHTG 672255
Score = 58.8 bits (122), Expect(3) = 6e-034
Identities = 22/60 (36%), Positives = 36/60 (60%)
Frame = +1 / -2
Query: 16 TISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIGTG 195
T++GI + NS H+ D + V DVN+++P D NTDG+H+ + +V I +T+ G
Sbjct: 6556678 TVTGITIQNSPQCHLKFDNCVKVLVHDVNVSSPGDSPNTDGIHLQNTRDVMIHTTTLACG 6556499
Score = 57.0 bits (118), Expect(5) = 6e-037
Identities = 22/63 (34%), Positives = 38/63 (60%)
Frame = +1 / -3
Query: 7 TNGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTI 186
+N + G+ + NS+ H+ I S + + V +T+P D NTDG+H+ S++V + +S I
Sbjct: 10809045 SNVYVRGLTIRNSQQMHLIIQRSTTVRISRVMVTSPGDSPNTDGIHITASTDVVVQDSKI 10808866
Query: 187 GTG 195
TG
Sbjct: 10808865 STG 10808857
Score = 55.6 bits (115), Expect(4) = 6e-022
Identities = 22/62 (35%), Positives = 37/62 (59%)
Frame = +1 / +2
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
N T+ ++ NS H+ + S+++ + D+ IT+P NTDG+H+ S+ V I +S I
Sbjct: 14388440 NVTLKSLRFRNSAQTHVLVMGSQNVYIDDIKITSPEASPNTDGIHITSSTAVSINHSDIA 14388619
Query: 190 TG 195
TG
Sbjct: 14388620 TG 14388625
Score = 55.1 bits (114), Expect(5) = 6e-044
Identities = 19/62 (30%), Positives = 37/62 (59%)
Frame = +1 / -2
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
N + + +++S+ HI + + + +T+ + + APA NTDG+H+ S + I N+T+
Sbjct: 14395936 NMRVENLNVIDSQQMHIALTSCRRVTISGLKVIAPATSPNTDGIHISVSRGIVIDNTTVS 14395757
Query: 190 TG 195
TG
Sbjct: 14395756 TG 14395751
Score = 49.2 bits (101), Expect(5) = 6e-037
Identities = 17/45 (37%), Positives = 32/45 (71%)
Frame = +1 / -3
Query: 514 SSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVE 648
+S V I ++ +RNI+GT+ + +A++ CS+ PCS + L ++N+E
Sbjct: 10808211 TSAVHISEIMYRNITGTTKSSKAINFKCSDAVPCSHIVLNNINLE 10808077
Score = 48.7 bits (100), Expect(5) = 5e-022
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = +1 / -1
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGI 273
TGDDC+SIG G V + N+TCGP GI
Sbjct: 5618366 TGDDCISIGAGCFNVDIKNVTCGPSHGI 5618283
Score = 47.3 bits (97), Expect(3) = 3e-041
Identities = 18/37 (48%), Positives = 27/37 (72%)
Frame = +1 / -3
Query: 547 RNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAG 657
+NI GTS+ AV+L CS++ PC V LID+N+++ G
Sbjct: 710508 KNIYGTSNNIVAVNLQCSKSFPCKNVELIDINLKHTG 710398
Score = 44.1 bits (90), Expect(5) = 6e-044
Identities = 16/37 (43%), Positives = 27/37 (72%)
Frame = +1 / -1
Query: 274 SVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVRIKSYE 384
S+G LG+ K ++V D+TV ++ +T NGVRIK+++
Sbjct: 14395532 SIGSLGKSKSWEEVRDITVDTAIISDTANGVRIKTWQ 14395422
Score = 43.2 bits (88), Expect(5) = 6e-037
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = +1 / -2
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGI 273
TGDDCVSI GS + + I CGPG GI
Sbjct: 10808764 TGDDCVSIVNGSAKIKMKRIYCGPGHGI 10808681
Score = 43.2 bits (88), Expect(5) = 6e-044
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +1 / -3
Query: 409 SHLTFENIRMEEVANPIIIDQYFCPQK 489
S + F NI+M V+NPIIIDQY+C +
Sbjct: 14395320 SKIIFRNIKMNNVSNPIIIDQYYCDSR 14395240
Score = 43.2 bits (88), Expect(5) = 6e-044
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +1 / -2
Query: 193 GDDCVSIGPGSDGVMVNNITCGPGQGI 273
GDDC+SI S + ++NI CGPG GI
Sbjct: 14395678 GDDCISIVKNSTQISISNIICGPGHGI 14395598
Score = 42.8 bits (87), Expect(5) = 5e-022
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +1 / -2
Query: 547 RNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEY 651
+NI GTS+ V+L CS++ PC V LID+N+++
Sbjct: 713845 KNIYGTSNNIVTVNLQCSKSFPCKNVELIDINLKH 713741
Score = 42.3 bits (86), Expect(3) = 3e-041
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +1 / -1
Query: 403 TASHLTFENIRMEEVANPIIIDQYFCPQKVCPGKRS 510
+ S + F NI M V NPI+IDQY+C C + S
Sbjct: 5617997 SVSRIVFSNILMVNVRNPIMIDQYYCQTNNCANQTS 5617890
Score = 41.8 bits (85), Expect(5) = 6e-037
Identities = 14/20 (70%), Positives = 19/20 (95%)
Frame = +1 / -1
Query: 421 FENIRMEEVANPIIIDQYFC 480
FEN+ M++VANPIIIDQ++C
Sbjct: 10808381 FENVVMQDVANPIIIDQFYC 10808322
Score = 41.4 bits (84), Expect(4) = 6e-022
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +1 / +3
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGI 273
TGDDCVSIG + + V + CGPG G+
Sbjct: 14388699 TGDDCVSIGDQVNNLNVTFMNCGPGHGV 14388782
Score = 41.4 bits (84), Expect(5) = 5e-022
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1 / -1
Query: 376 SYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
S+E + S + S+ +ENI+M +V PI IDQ +C C
Sbjct: 714107 SWESSASKIVVSNFIYENIQMIDVGKPINIDQKYCSHPPC 713988
Score = 39.1 bits (79), Expect(5) = 5e-022
Identities = 15/37 (40%), Positives = 26/37 (70%)
Frame = +1 / -1
Query: 274 SVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVRIKSYE 384
S+G LG + + VS++TV + + N+ NGVRIK+++
Sbjct: 5618120 SIGSLGVHNSQAYVSNITVTNSTIWNSDNGVRIKTWQ 5618010
Score = 38.2 bits (77), Expect(5) = 6e-037
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = +1 / -3
Query: 274 SVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVRIKSYE 384
S+G LG+ + V+ V + L+NTTNG+RIK+++
Sbjct: 10808604 SIGSLGQGHSKGTVTAVVLETAFLKNTTNGLRIKTWQ 10808494
Score = 36.8 bits (74), Expect(3) = 6e-034
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1 / -3
Query: 415 LTFENIRMEEVANPIIIDQYFCPQKVC 495
+ F NI++ EV PI+IDQ++C C
Sbjct: 6556113 ILFSNIQLTEVQLPIVIDQFYCDHSKC 6556033
Score = 33.1 bits (66), Expect(4) = 6e-022
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +1 / +1
Query: 274 SVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVRIKSY 381
S+G LGR E V ++ V TTNG RIK++
Sbjct: 14388865 SIGSLGRGGTEVTVENIRVSHVNFTGTTNGARIKTW 14388972
Score = 30.4 bits (60), Expect(4) = 6e-022
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1 / +1
Query: 415 LTFENIRMEEVANPIIIDQYFCPQKVC 495
+ F +IR V NPIIIDQ++ C
Sbjct: 14389000 IEFFDIRFSSVQNPIIIDQFYGCAPTC 14389080
Score = 26.7 bits (52), Expect(2) = 5e-037
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +1 / -1
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAP 114
N I I LNSK + N + + V ITAP
Sbjct: 672992 NSRIKDITSLNSKMGYFNFFSVHHFNITGVTITAP 672888
>gb|AC026757.12|AC026757 Arabidopsis thaliana chromosome 1 BAC F2H10 genomic sequence, complete
sequence
Length = 95870
Score = 192 bits (413), Expect(2) = 2e-059
Identities = 78/162 (48%), Positives = 105/162 (64%)
Frame = +1 / -2
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
N I I LNSK H N + + V ITAP D NTDG+ +G SN+ I+N+ IG
Sbjct: 81019 NSRIKDITSLNSKMGHFNFFSVHRFNITGVTITAPGDSPNTDGIKMGSCSNIHISNTNIG 80840
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVR 369
TGDDC++I G+ + ++N+ CGPG GISVG LG+ KDEKDV +TVRD V T++G+R
Sbjct: 80839 TGDDCIAILSGTTNLDISNVKCGPGHGISVGSLGKNKDEKDVKHLTVRDTVFNGTSDGIR 80660
Query: 370 IKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
IK++E + S L S+ +ENI+M +V PI IDQ +CP C
Sbjct: 80659 IKTWESSASKLVVSNFIYENIQMIDVGKPINIDQKYCPHPPC 80534
Score = 192 bits (413), Expect(2) = 2e-059
Identities = 78/162 (48%), Positives = 105/162 (64%)
Frame = +1 / -1
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
N I I LNSK H N + + V ITAP D NTDG+ +G SN+ I+N+ IG
Sbjct: 84341 NSRIKDITSLNSKMGHFNFFSVHRFNITGVTITAPGDSPNTDGIKMGSCSNIHISNTNIG 84162
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVR 369
TGDDC++I G+ + ++N+ CGPG GISVG LG+ KDEKDV +TVRD V T++G+R
Sbjct: 84161 TGDDCIAILSGTTNLDISNVKCGPGHGISVGSLGKNKDEKDVKHLTVRDTVFNGTSDGIR 83982
Query: 370 IKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
IK++E + S L S+ +ENI+M +V PI IDQ +CP C
Sbjct: 83981 IKTWESSASKLVVSNFIYENIQMIDVGKPINIDQKYCPHPPC 83856
Score = 191 bits (412), Expect(2) = 2e-059
Identities = 78/162 (48%), Positives = 105/162 (64%)
Frame = +1 / -3
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
N I I LNSK H N + + V ITAP D NTDG+ +G SN+ I+N+ IG
Sbjct: 77697 NSRIKDITSLNSKMGHFNFFSVHRFNITGVTITAPGDSPNTDGIKMGSCSNIHISNTNIG 77518
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVR 369
TGDDC++I G+ + ++NI CGPG GISVG LG+ KDEKDV +TVRD V T++G+R
Sbjct: 77517 TGDDCIAILSGTTNLDISNIKCGPGHGISVGSLGKNKDEKDVKHLTVRDTVFNGTSDGIR 77338
Query: 370 IKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
IK++E + S + S+ +ENI+M +V PI IDQ +CP C
Sbjct: 77337 IKTWESSASKIVVSNFIYENIQMIDVGKPINIDQKYCPHPPC 77212
Score = 188 bits (406), Expect(2) = 1e-055
Identities = 76/162 (46%), Positives = 105/162 (64%)
Frame = +1 / -2
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
N + I LNSK H N + + V ITAP D NTDG+ +G SN+ I+N+ IG
Sbjct: 87682 NSRMKDITSLNSKMGHFNFFSVHRFNITGVTITAPGDSPNTDGIKMGSCSNIHISNTNIG 87503
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVR 369
TGDDC++I G+ + ++N+ CGPG GISVG LG+ KDEKDV +TVRD V T++G+R
Sbjct: 87502 TGDDCIAILSGTTNLDISNVKCGPGHGISVGRLGKNKDEKDVKHLTVRDTVFNGTSDGIR 87323
Query: 370 IKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
IK++E + S + S+ +ENI+M +V PI IDQ +CP C
Sbjct: 87322 IKTWESSASKIVVSNFIYENIQMIDVGKPINIDQKYCPHPPC 87197
Score = 150 bits (322), Expect(2) = 6e-037
Identities = 58/126 (46%), Positives = 85/126 (67%)
Frame = +1 / -3
Query: 118 DVENTDGVHVGGSSNVRITNSTIGTGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRY 297
D NTD + +G SN+ I+N+ IGT DDC+ I G+ + ++N+ CG GISVG LG+
Sbjct: 49431 DSPNTDSIKMGSCSNIHISNTNIGTRDDCIVILSGTTNLDISNVKCGSVHGISVGSLGKN 49252
Query: 298 KDEKDVSDVTVRDCVLRNTTNGVRIKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYF 477
KDEKDV +TVRD V T++G+RIK++E + S++ ++ +ENI+M +V PI IDQ +
Sbjct: 49251 KDEKDVKHLTVRDTVFNGTSDGIRIKTWESSASIIVVTNFIYENIQMIDVGKPINIDQKY 49072
Query: 478 CPQKVC 495
CP C
Sbjct: 49071 CPHPPC 49054
Score = 60.6 bits (126), Expect(2) = 2e-059
Identities = 23/47 (48%), Positives = 34/47 (72%)
Frame = +1 / -2
Query: 517 SHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAG 657
SHV I+D+ +NI GTS+ AV+L CS++ PC V LID+N+++ G
Sbjct: 77098 SHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCKNVELIDINLKHTG 76958
Score = 60.6 bits (126), Expect(2) = 2e-059
Identities = 23/47 (48%), Positives = 34/47 (72%)
Frame = +1 / -1
Query: 517 SHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAG 657
SHV I+D+ +NI GTS+ AV+L CS++ PC V LID+N+++ G
Sbjct: 80420 SHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCKNVELIDINLKHTG 80280
Score = 60.6 bits (126), Expect(2) = 2e-059
Identities = 23/47 (48%), Positives = 34/47 (72%)
Frame = +1 / -3
Query: 517 SHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAG 657
SHV I+D+ +NI GTS+ AV+L CS++ PC V LID+N+++ G
Sbjct: 83742 SHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCKNVELIDINLKHTG 83602
Score = 60.2 bits (125), Expect(2) = 1e-055
Identities = 23/47 (48%), Positives = 33/47 (70%)
Frame = +1 / -1
Query: 517 SHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAG 657
SHV I+D+ +NI GTS AV+L CS++ PC V LID+N+++ G
Sbjct: 48941 SHVQIQDIKLKNIYGTSKNIMAVNLQCSKSFPCKNVELIDINLKHTG 48801
Score = 26.7 bits (52), Expect(2) = 6e-037
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +1 / -1
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAP 114
N I I LNSK + N + + V ITAP
Sbjct: 49538 NSRIKDITSLNSKMGYFNFFSVHHFNITGVTITAP 49434
>gb|AU238792.1|AU238792 AU238792 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-14-E02 5',
mRNA sequence
Length = 635
Score = 205 bits (443), Expect(2) = 2e-059
Identities = 85/170 (50%), Positives = 116/170 (68%)
Frame = +1 / +2
Query: 7 TNGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTI 186
TN I I +++K FHIN+ +K++T +V I APA+ NTDG+H+G S V I NS I
Sbjct: 14 TNAEIRDISSIDAKNFHINVIGAKNMTFDNVKIMAPAESPNTDGIHLGRSVGVSIINSRI 193
Query: 187 GTGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGV 366
TGDDCVS+G G ++V N+ CGPG GISVG LGRY E+DVS + V +C L+ T NG+
Sbjct: 194 STGDDCVSVGDGMVNLLVKNVVCGPGHGISVGSLGRYGHEQDVSGIRVINCTLQETDNGL 373
Query: 367 RIKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVCPGKRSNS 516
RIK++ A TAS++ FENI + V+NPI+IDQ +CP C ++S+S
Sbjct: 374 RIKTWPSAACSTTASNIHFENIILRNVSNPILIDQEYCPWNQCNKQKSSS 523
Score = 114 bits (244), Expect = 4e-024
Identities = 61/148 (41%), Positives = 75/148 (50%)
Frame = -1 / -3
Query: 488 FWGQKYWSMMMGLATSSILMFSKVRWDAVSTDSASSYDLMRTPLVVFLSTQXXXXXXXXX 309
F GQ WSM +GL T ++FSK +AV +A L+ PL V Q
Sbjct: 495 FQGQYSWSMRIGLLTFLRMIFSK*ILEAVVEQAAEGQVLILRPLSVSWRVQLMTLMPLTS 316
Query: 308 XXXXXRPRQPTLMPCPGPQVMLFTMTPSLPGPMETQSSPVPMVELVMRTLEDPPTWTPSV 129
PR PTL+PCPGP T ++P P ETQSSPV ++EL+M T P W PSV
Sbjct: 315 CSCPYLPRLPTLIPCPGPHTTFLTRRFTIPSPTETQSSPVEILELIMETPTLLPKWIPSV 136
Query: 128 FSTSAGAVMFTSFTVMSLEVSMLMWKNL 45
SAGA++ T VM L LM K L
Sbjct: 135 LGLSAGAMILTLSKVMFLAPITLM*KFL 52
Score = 46.9 bits (96), Expect(2) = 2e-059
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +1 / +2
Query: 505 RSNSSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSL 630
+ SS + + +++FR I GTS +AV LLCS+ PC V +
Sbjct: 506 KQKSSSIKLANISFRRIRGTSGNKDAVKLLCSKGYPCENVQV 631
>gb|BT005245.1| Arabidopsis thaliana At3g07830 mRNA, complete cds
Length = 678
Score = 183 bits (394), Expect(2) = 2e-059
Identities = 75/145 (51%), Positives = 100/145 (68%)
Frame = +1 / +1
Query: 82 ITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIGTGDDCVSIGPGSDGVMVNNITCGP 261
+T +V I APA+ NTDG+H+G S V I NS I TGDDCVS+G G ++V N+ CGP
Sbjct: 1 MTFDNVKIMAPAESPNTDGIHLGRSVGVSIINSRISTGDDCVSVGDGMVNLLVKNVVCGP 180
Query: 262 GQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVRIKSYEDAESVLTASHLTFENIRME 441
G GISVG LGRY E+DVS + V +C L+ T NG+RIK++ A TAS++ FENI +
Sbjct: 181 GHGISVGSLGRYGHEQDVSGIRVINCTLQETDNGLRIKTWPSAACSTTASNIHFENIILR 360
Query: 442 EVANPIIIDQYFCPQKVCPGKRSNS 516
V+NPI+IDQ +CP C ++S+S
Sbjct: 361 NVSNPILIDQEYCPWNQCNKQKSSS 435
Score = 109 bits (233), Expect(2) = 2e-024
Identities = 54/131 (41%), Positives = 68/131 (51%)
Frame = -1 / -2
Query: 488 FWGQKYWSMMMGLATSSILMFSKVRWDAVSTDSASSYDLMRTPLVVFLSTQXXXXXXXXX 309
F GQ WSM +GL T ++FSK +AV +A L+ PL V Q
Sbjct: 407 FQGQYSWSMRIGLLTFLRMIFSK*ILEAVVEQAAEGQVLILRPLSVSWRVQLMTLMPLTS 228
Query: 308 XXXXXRPRQPTLMPCPGPQVMLFTMTPSLPGPMETQSSPVPMVELVMRTLEDPPTWTPSV 129
PR PTL+PCPGP T ++P P ETQSSPV ++EL+M T P W PSV
Sbjct: 227 CSCPYLPRLPTLIPCPGPHTTFLTRRFTIPSPTETQSSPVEILELIMETPTLLPKWIPSV 48
Query: 128 FSTSAGAVMFT 96
SAGA++ T
Sbjct: 47 LGLSAGAMILT 15
Score = 68.9 bits (144), Expect(2) = 2e-059
Identities = 25/70 (35%), Positives = 41/70 (58%)
Frame = +1 / +1
Query: 505 RSNSSHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVC 684
+ SS + + +++FR I GTS +AV LLCS+ PC V + D+N++Y G + +C
Sbjct: 418 KQKSSSIKLANISFRRIRGTSGNKDAVKLLCSKGYPCENVQVGDINIQYTGADGPATFMC 597
Query: 685 SNAKGTAKGS 714
SN + G+
Sbjct: 598 SNVRPKLVGT 627
Score = 25.8 bits (50), Expect(2) = 2e-024
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = -1 / -2
Query: 713 LPLAVPLALLHTAMVLLFLPAYSTLTSMSETPLHGCVSEQSRLTASGVDDVPEMLRKV 540
+P ++ L H + P Y L S + T HG + TAS DVP +L K+
Sbjct: 626 VPTSLGLTFEHMKVAGPSAPVY*ILMSPT*TFSHGYPLLHNSFTASLFPDVPLILLKL 453
>gb|AC002505.3| Arabidopsis thaliana chromosome 2 clone T9J22 map B68, complete sequence
Length = 115851
Score = 193 bits (415), Expect(2) = 3e-059
Identities = 78/166 (46%), Positives = 108/166 (65%)
Frame = +1 / -1
Query: 10 NGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIG 189
N I I LNSK H N + V ITAP+D NTDG+ +G SN++I+N+ IG
Sbjct: 111651 NSNIKDITSLNSKMGHFNFFFVHHFNITGVTITAPSDSPNTDGIKMGSCSNIQISNTNIG 111472
Query: 190 TGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVR 369
TGDDC++I G+ + ++NI CGPG GISVG LG+ KDEKDV D+ VRD + T++G+R
Sbjct: 111471 TGDDCIAILSGTTKLNISNINCGPGHGISVGSLGKNKDEKDVKDLFVRDVIFNGTSDGIR 111292
Query: 370 IKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVCPGKR 507
IK++E + S + S+ +ENI+M +V PI IDQ +CP C +R
Sbjct: 111291 IKTWESSASKILVSNFVYENIQMIDVGKPINIDQKYCPHPPCEHER 111154
Score = 58.8 bits (122), Expect(2) = 3e-059
Identities = 23/47 (48%), Positives = 32/47 (68%)
Frame = +1 / -3
Query: 517 SHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAG 657
SHV I+D+ +NI GTS AV+L CS++ PC V LID+N++ G
Sbjct: 111055 SHVQIQDLKLKNIYGTSKNKVAVNLQCSKSFPCKNVELIDINIKQNG 110915
>ref|NM_117928.1| Arabidopsis thaliana polygalacturonase AT4G18180 mRNA, complete cds
Length = 1245
Score = 204 bits (440), Expect(2) = 2e-058
Identities = 82/156 (52%), Positives = 109/156 (69%)
Frame = +1 / +1
Query: 28 IKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNSTIGTGDDCV 207
I +NSKFFHI + +D +NITAP+D NTDG+H+ SSNV + S I TGDDCV
Sbjct: 508 ISSVNSKFFHIALVECRDFKGTRLNITAPSDSPNTDGIHIERSSNVYFSRSHIATGDDCV 687
Query: 208 SIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTNGVRIKSYED 387
SIG G+ + + +I CGPG GISVG LGRY +EKDV+ + V+DC + TTNG+RIK++ +
Sbjct: 688 SIGQGNSQITITSIKCGPGHGISVGSLGRYPNEKDVNGLVVKDCKISGTTNGIRIKTWAN 867
Query: 388 AESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVC 495
+ + A+++TFENI M V NPIIIDQ +CP C
Sbjct: 868 SPGLSAATNMTFENIIMNNVTNPIIIDQSYCPFSSC 975
Score = 100 bits (213), Expect(2) = 6e-023
Identities = 56/147 (38%), Positives = 73/147 (49%)
Frame = -1 / -2
Query: 467 SMMMGLATSSILMFSKVRWDAVSTDSASSYDLMRTPLVVFLSTQXXXXXXXXXXXXXXRP 288
SMM+GL T I++FSKV A + L+ P VV L Q P
Sbjct: 947 SMMIGLVTLFIIIFSKVMLVAALRPGELAQVLILIPFVVPLILQSFTTSPLTSFSFGYLP 768
Query: 287 RQPTLMPCPGPQVMLFTMTPSLPGPMETQSSPVPMVELVMRTLEDPPTWTPSVFSTSAGA 108
+ PTL+PCPGP ++L + P P+ETQSSPV + E T E PSVF S GA
Sbjct: 767 KLPTLIPCPGPHLILVIVI*EFPCPIETQSSPVAICEREKYTFELRSICIPSVFGLSEGA 588
Query: 107 VMFTSFTVMSLEVSMLMWKNLELSSLI 27
VM + + SL + + KNL + LI
Sbjct: 587 VMLSLVPLKSLHSTNAI*KNLLFTELI 507
Score = 44.6 bits (91), Expect(2) = 2e-058
Identities = 19/49 (38%), Positives = 30/49 (61%)
Frame = +1 / +1
Query: 517 SHVSIKDVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKN 663
S V + ++ F+NI GTSS+ AV L CS PC V L +V+++ + +
Sbjct: 991 SKVELSEIYFKNIRGTSSSLVAVQLHCSRGMPCKKVYLENVHLDLSSSD 1137
Score = 29.5 bits (58), Expect(2) = 6e-023
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = -1 / -2
Query: 623 TPLHGCVSEQSRLTASGVDDVPEMLRKVTSLMETCE 516
T LHG Q TA+ DDVP + K SL T E
Sbjct: 1097 TFLHGIPLLQCSCTATSEDDVPLIFLKYISLSSTFE 990
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,248,155,303
Number of Sequences: 1013581
Number of extensions: 13807510
Number of successful extensions: 107474
Number of sequences better than 1.0e-020: 243
length of database: 302,980,290
effective HSP length: 56
effective length of database: 246,219,754
effective search space used: 61801158254
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)