TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3183567.2.1
(681 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 212 3e-056
gb|AC009999.2|T20M3 Sequence of BAC T20M3 from Arabidopsis ... 212 3e-056
gb|AF422179.1| Arabidopsis thaliana chitinase-like protein ... 212 3e-056
ref|NM_100466.3| Arabidopsis thaliana ELP (ECTOPIC DEPOSITI... 212 3e-056
emb|BX815076.1|CNS0ACXQ Arabidopsis thaliana Full-length cD... 214 3e-056
gb|AY034935.1| Arabidopsis thaliana putative class I chitin... 212 3e-056
gb|AF422178.1| Arabidopsis thaliana chitinase-like protein ... 212 3e-056
gb|AY113925.1| Arabidopsis thaliana putative class I chitin... 212 3e-056
gb|AF332458.1| Arabidopsis thaliana clone C00164 (e) putati... 212 3e-056
gb|BP563135.1|BP563135 BP563135 RAFL13 Arabidopsis thaliana... 212 3e-056
gb|AV785107.1|AV785107 AV785107 RAFL6 Arabidopsis thaliana ... 212 3e-056
gb|AV552515.1|AV552515 AV552515 Arabidopsis thaliana roots ... 212 3e-056
gb|AV545107.1|AV545107 AV545107 Arabidopsis thaliana roots ... 212 3e-056
gb|AV526991.1|AV526991 AV526991 Arabidopsis thaliana aboveg... 212 3e-056
gb|AV782956.1|AV782956 AV782956 RAFL5 Arabidopsis thaliana ... 208 4e-055
emb|BX816658.1|CNS0AEHE Arabidopsis thaliana Full-length cD... 209 7e-055
gb|AV520752.1|AV520752 AV520752 Arabidopsis thaliana aboveg... 205 3e-054
gb|AV539778.1|AV539778 AV539778 Arabidopsis thaliana roots ... 207 8e-054
gb|BX840204.1|BX840204 BX840204 Arabidopsis thaliana Hormon... 212 1e-053
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 212 1e-053
gb|AV555057.1|AV555057 AV555057 Arabidopsis thaliana green ... 194 5e-051
gb|AV561479.1|AV561479 AV561479 Arabidopsis thaliana green ... 194 5e-051
gb|AV545115.1|AV545115 AV545115 Arabidopsis thaliana roots ... 192 2e-050
gb|CB259194.1|CB259194 69-E9624-013-004-J17-T7R MPIZ-ADIS-0... 198 1e-049
gb|AV540567.1|AV540567 AV540567 Arabidopsis thaliana roots ... 188 4e-049
gb|AV562663.1|AV562663 AV562663 Arabidopsis thaliana green ... 183 9e-048
gb|AV562712.1|AV562712 AV562712 Arabidopsis thaliana green ... 175 4e-045
dbj|AB026636.1| Arabidopsis thaliana genomic DNA, chromosom... 152 3e-044
ref|NM_112568.3| Arabidopsis thaliana chitinase AT3G16920 m... 152 3e-044
gb|AF412071.1|AF412071 Arabidopsis thaliana AT3g16920/K14A1... 152 3e-044
gb|AY090261.1| Arabidopsis thaliana AT3g16920/K14A17_4 mRNA... 152 3e-044
gb|BE038005.1|BE038005 AA07F03 AA Arabidopsis thaliana cDNA... 152 3e-044
gb|AV783775.1|AV783775 AV783775 RAFL5 Arabidopsis thaliana ... 152 3e-044
gb|AV566514.1|AV566514 AV566514 Arabidopsis thaliana green ... 170 8e-044
gb|AV550792.1|AV550792 AV550792 Arabidopsis thaliana roots ... 170 3e-043
gb|AV439664.1|AV439664 AV439664 Arabidopsis thaliana above-... 168 3e-042
gb|AV560501.1|AV560501 AV560501 Arabidopsis thaliana green ... 144 7e-042
gb|N37676.1|N37676 18903 Lambda-PRL2 Arabidopsis thaliana c... 144 7e-042
gb|AV562373.1|AV562373 AV562373 Arabidopsis thaliana green ... 136 3e-039
gb|AV439686.2|AV439686 AV439686 Arabidopsis thaliana above-... 154 7e-039
gb|BP579684.1|BP579684 BP579684 RAFL14 Arabidopsis thaliana... 84 1e-036
gb|AV786222.1|AV786222 AV786222 RAFL6 Arabidopsis thaliana ... 145 3e-036
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 152 9e-036
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 152 9e-036
gb|AV562314.1|AV562314 AV562314 Arabidopsis thaliana green ... 142 2e-035
gb|AV561169.1|AV561169 AV561169 Arabidopsis thaliana green ... 142 2e-035
emb|AL954570.1| Arabidopsis thaliana transposon insertion S... 122 3e-034
gb|BP585980.1|BP585980 BP585980 RAFL15 Arabidopsis thaliana... 87 1e-033
gb|AV556920.1|AV556920 AV556920 Arabidopsis thaliana green ... 111 2e-031
gb|AV564773.1|AV564773 AV564773 Arabidopsis thaliana green ... 127 4e-031
gb|BP795384.1|BP795384 BP795384 RAFL7 Arabidopsis thaliana ... 123 1e-029
gb|AV564265.1|AV564265 AV564265 Arabidopsis thaliana green ... 122 1e-029
gb|AV557086.1|AV557086 AV557086 Arabidopsis thaliana green ... 122 1e-029
gb|AV563990.1|AV563990 AV563990 Arabidopsis thaliana green ... 122 1e-029
gb|AV815813.1|AV815813 AV815813 RAFL9 Arabidopsis thaliana ... 118 3e-029
gb|AV553078.1|AV553078 AV553078 Arabidopsis thaliana roots ... 121 5e-029
gb|AV564014.1|AV564014 AV564014 Arabidopsis thaliana green ... 121 5e-029
gb|AV563705.1|AV563705 AV563705 Arabidopsis thaliana green ... 121 5e-029
gb|BP585701.1|BP585701 BP585701 RAFL15 Arabidopsis thaliana... 118 2e-028
gb|BP589960.1|BP589960 BP589960 RAFL15 Arabidopsis thaliana... 118 3e-028
gb|AV807803.1|AV807803 AV807803 RAFL9 Arabidopsis thaliana ... 116 1e-027
gb|AV518319.1|AV518319 AV518319 Arabidopsis thaliana aboveg... 117 3e-027
gb|BP570348.1|BP570348 BP570348 RAFL14 Arabidopsis thaliana... 78 3e-027
gb|BP641839.1|BP641839 BP641839 RAFL19 Arabidopsis thaliana... 112 1e-026
gb|AA728545.1|AA728545 32954 Lambda-PRL2 Arabidopsis thalia... 98 4e-026
gb|BP581732.1|BP581732 BP581732 RAFL14 Arabidopsis thaliana... 110 6e-026
gb|BP594913.1|BP594913 BP594913 RAFL15 Arabidopsis thaliana... 110 6e-026
gb|AV566493.1|AV566493 AV566493 Arabidopsis thaliana green ... 110 6e-026
gb|BP795303.1|BP795303 BP795303 RAFL7 Arabidopsis thaliana ... 108 3e-025
gb|AV797054.1|AV797054 AV797054 RAFL9 Arabidopsis thaliana ... 108 3e-025
gb|BP590718.1|BP590718 BP590718 RAFL15 Arabidopsis thaliana... 71 1e-024
gb|AV562024.1|AV562024 AV562024 Arabidopsis thaliana green ... 86 2e-024
gb|BP568417.1|BP568417 BP568417 RAFL14 Arabidopsis thaliana... 103 2e-024
gb|AV566816.1|AV566816 AV566816 Arabidopsis thaliana green ... 105 3e-024
gb|AV522531.1|AV522531 AV522531 Arabidopsis thaliana aboveg... 105 3e-024
gb|BP589663.1|BP589663 BP589663 RAFL15 Arabidopsis thaliana... 106 3e-024
gb|BP565392.1|BP565392 BP565392 RAFL14 Arabidopsis thaliana... 100 6e-023
gb|BP566097.1|BP566097 BP566097 RAFL14 Arabidopsis thaliana... 100 6e-023
gb|BP608265.1|BP608265 BP608265 RAFL16 Arabidopsis thaliana... 100 6e-023
gb|BP634103.1|BP634103 BP634103 RAFL17 Arabidopsis thaliana... 100 6e-023
gb|BP569116.1|BP569116 BP569116 RAFL14 Arabidopsis thaliana... 65 2e-022
gb|AV786534.1|AV786534 AV786534 RAFL6 Arabidopsis thaliana ... 100 2e-022
gb|BP566904.1|BP566904 BP566904 RAFL14 Arabidopsis thaliana... 99 2e-022
gb|AV808417.1|AV808417 AV808417 RAFL9 Arabidopsis thaliana ... 107 3e-022
gb|BP581976.1|BP581976 BP581976 RAFL14 Arabidopsis thaliana... 79 3e-022
gb|AV563016.1|AV563016 AV563016 Arabidopsis thaliana green ... 98 4e-022
gb|AV805044.1|AV805044 AV805044 RAFL9 Arabidopsis thaliana ... 98 4e-022
gb|BP780040.1|BP780040 BP780040 RAFL7 Arabidopsis thaliana ... 98 4e-022
gb|BP583186.1|BP583186 BP583186 RAFL14 Arabidopsis thaliana... 76 1e-021
gb|BP574445.1|BP574445 BP574445 RAFL14 Arabidopsis thaliana... 95 3e-021
gb|AV797923.1|AV797923 AV797923 RAFL9 Arabidopsis thaliana ... 95 3e-021
gb|BP585494.1|BP585494 BP585494 RAFL15 Arabidopsis thaliana... 87 5e-021
gb|AV797523.1|AV797523 AV797523 RAFL9 Arabidopsis thaliana ... 58 6e-021
gb|AV788633.1|AV788633 AV788633 RAFL6 Arabidopsis thaliana ... 94 7e-021
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 212 bits (457), Expect(2) = 3e-056
Identities = 82/110 (74%), Positives = 94/110 (85%)
Frame = -2 / -2
Query: 674 AGGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSK 495
AG +KADLL PEY+EQNATLAF AA+WRWMTPIK++QPSAHD FVGNWKPTKNDTLSK
Sbjct: 1767107 AGEALKADLLNHPEYIEQNATLAFQAAIWRWMTPIKRAQPSAHDIFVGNWKPTKNDTLSK 1766928
Query: 494 RLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDN 345
R P FG+TMN+LYGE CG+G +D MN IISHY Y+LDLMG+GRE +G N
Sbjct: 1766927 RGPTFGSTMNVLYGEYTCGQGSIDPMNNIISHYLYFLDLMGIGREDAGPN 1766778
Score = 134 bits (287), Expect = 3e-030
Identities = 66/112 (58%), Positives = 70/112 (62%)
Frame = +1 / +1
Query: 340 SRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGRRLLSVSFLV 519
S P S P PMRSR Y *CEI+ F+ S P P + SP* FMV P G RL VSF V
Sbjct: 1766773 SSFGPASSLPIPMRSRKYK*CEIMLFIGSMEP*PHVYSP*RTFMVLPKVGPRLDKVSFFV 1766952
Query: 520 GFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSALIPPPA 675
GFQ PTK S A+G LIGVIH IAA NASVAFCS YSG RSA PA
Sbjct: 1766953 GFQFPTKMS*AEG*ALLIGVIHLQIAAWNASVAFCSMYSGWFKRSAFRASPA 1767108
Score = 29.0 bits (57), Expect(2) = 3e-056
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / -2
Query: 350 DNRDCAEQAPFNPSS 306
D CAEQ PFNPS+
Sbjct: 1766777 DELSCAEQKPFNPST 1766733
>gb|AC009999.2|T20M3 Sequence of BAC T20M3 from Arabidopsis thaliana chromosome 1, complete
sequence
Length = 79554
Score = 212 bits (457), Expect(2) = 3e-056
Identities = 82/110 (74%), Positives = 94/110 (85%)
Frame = -2 / -1
Query: 674 AGGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSK 495
AG +KADLL PEY+EQNATLAF AA+WRWMTPIK++QPSAHD FVGNWKPTKNDTLSK
Sbjct: 45732 AGEALKADLLNHPEYIEQNATLAFQAAIWRWMTPIKRAQPSAHDIFVGNWKPTKNDTLSK 45553
Query: 494 RLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDN 345
R P FG+TMN+LYGE CG+G +D MN IISHY Y+LDLMG+GRE +G N
Sbjct: 45552 RGPTFGSTMNVLYGEYTCGQGSIDPMNNIISHYLYFLDLMGIGREDAGPN 45403
Score = 134 bits (287), Expect(2) = 5e-031
Identities = 66/112 (58%), Positives = 70/112 (62%)
Frame = +1 / +2
Query: 340 SRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGRRLLSVSFLV 519
S P S P PMRSR Y *CEI+ F+ S P P + SP* FMV P G RL VSF V
Sbjct: 45398 SSFGPASSLPIPMRSRKYK*CEIMLFIGSMEP*PHVYSP*RTFMVLPKVGPRLDKVSFFV 45577
Query: 520 GFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSALIPPPA 675
GFQ PTK S A+G LIGVIH IAA NASVAFCS YSG RSA PA
Sbjct: 45578 GFQFPTKMS*AEG*ALLIGVIHLQIAAWNASVAFCSMYSGWFKRSAFRASPA 45733
Score = 29.0 bits (57), Expect(2) = 3e-056
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / -1
Query: 350 DNRDCAEQAPFNPSS 306
D CAEQ PFNPS+
Sbjct: 45402 DELSCAEQKPFNPST 45358
Score = 22.1 bits (42), Expect(2) = 5e-031
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / +2
Query: 307 LEGLNGACSAQ 339
+EGL G CSAQ
Sbjct: 45359 VEGLKGFCSAQ 45391
>gb|AF422179.1| Arabidopsis thaliana chitinase-like protein 1 (CTL1) gene, CTL1-ELP1
allele, complete cds
Length = 2570
Score = 212 bits (457), Expect(2) = 3e-056
Identities = 82/110 (74%), Positives = 94/110 (85%)
Frame = -2 / +3
Query: 674 AGGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSK 495
AG +KADLL PEY+EQNATLAF AA+WRWMTPIK++QPSAHD FVGNWKPTKNDTLSK
Sbjct: 1770 AGEALKADLLNHPEYIEQNATLAFQAAIWRWMTPIKRAQPSAHDIFVGNWKPTKNDTLSK 1949
Query: 494 RLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDN 345
R P FG+TMN+LYGE CG+G +D MN IISHY Y+LDLMG+GRE +G N
Sbjct: 1950 RGPTFGSTMNVLYGEYTCGQGSIDPMNNIISHYLYFLDLMGIGREDAGPN 2099
Score = 134 bits (287), Expect(2) = 6e-031
Identities = 66/112 (58%), Positives = 70/112 (62%)
Frame = +1 / -2
Query: 340 SRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGRRLLSVSFLV 519
S P S P PMRSR Y *CEI+ F+ S P P + SP* FMV P G RL VSF V
Sbjct: 2104 SSFGPASSLPIPMRSRKYK*CEIMLFIGSMEP*PHVYSP*RTFMVLPKVGPRLDKVSFFV 1925
Query: 520 GFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSALIPPPA 675
GFQ PTK S A+G LIGVIH IAA NASVAFCS YSG RSA PA
Sbjct: 1924 GFQFPTKMS*AEG*ALLIGVIHLQIAAWNASVAFCSMYSGWFKRSAFRASPA 1769
Score = 29.0 bits (57), Expect(2) = 3e-056
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / +3
Query: 350 DNRDCAEQAPFNPSS 306
D CAEQ PFNPS+
Sbjct: 2100 DELSCAEQKPFNPST 2144
Score = 22.1 bits (42), Expect(2) = 6e-031
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / -2
Query: 307 LEGLNGACSAQ 339
+EGL G CSAQ
Sbjct: 2143 VEGLKGFCSAQ 2111
>ref|NM_100466.3| Arabidopsis thaliana ELP (ECTOPIC DEPOSITION OF LIGNIN IN PITH);
chitinase AT1G05850 (ELP) mRNA, complete cds
Length = 1446
Score = 212 bits (457), Expect(2) = 3e-056
Identities = 82/110 (74%), Positives = 94/110 (85%)
Frame = -2 / +1
Query: 674 AGGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSK 495
AG +KADLL PEY+EQNATLAF AA+WRWMTPIK++QPSAHD FVGNWKPTKNDTLSK
Sbjct: 718 AGEALKADLLNHPEYIEQNATLAFQAAIWRWMTPIKRAQPSAHDIFVGNWKPTKNDTLSK 897
Query: 494 RLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDN 345
R P FG+TMN+LYGE CG+G +D MN IISHY Y+LDLMG+GRE +G N
Sbjct: 898 RGPTFGSTMNVLYGEYTCGQGSIDPMNNIISHYLYFLDLMGIGREDAGPN 1047
Score = 134 bits (287), Expect(2) = 6e-031
Identities = 66/112 (58%), Positives = 70/112 (62%)
Frame = +1 / -2
Query: 340 SRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGRRLLSVSFLV 519
S P S P PMRSR Y *CEI+ F+ S P P + SP* FMV P G RL VSF V
Sbjct: 1052 SSFGPASSLPIPMRSRKYK*CEIMLFIGSMEP*PHVYSP*RTFMVLPKVGPRLDKVSFFV 873
Query: 520 GFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSALIPPPA 675
GFQ PTK S A+G LIGVIH IAA NASVAFCS YSG RSA PA
Sbjct: 872 GFQFPTKMS*AEG*ALLIGVIHLQIAAWNASVAFCSMYSGWFKRSAFRASPA 717
Score = 29.0 bits (57), Expect(2) = 3e-056
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / +1
Query: 350 DNRDCAEQAPFNPSS 306
D CAEQ PFNPS+
Sbjct: 1048 DELSCAEQKPFNPST 1092
Score = 22.1 bits (42), Expect(2) = 6e-031
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / -2
Query: 307 LEGLNGACSAQ 339
+EGL G CSAQ
Sbjct: 1091 VEGLKGFCSAQ 1059
>emb|BX815076.1|CNS0ACXQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS30ZC09 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1344
Score = 214 bits (461), Expect(2) = 3e-056
Identities = 83/116 (71%), Positives = 97/116 (83%)
Frame = -2 / +1
Query: 674 AGGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSK 495
AG +KADLL PEY+EQNATLAF AA+WRWMTPIK++QPSAHD FVGNWKPTKNDTLSK
Sbjct: 697 AGEALKADLLNHPEYIEQNATLAFQAAIWRWMTPIKRAQPSAHDIFVGNWKPTKNDTLSK 876
Query: 494 RLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDNRDCAEQ 327
R P FG+TMN+LYGE CG+G +D MN IISHY Y+LDLMG+GRE +G N + + Q
Sbjct: 877 RGPTFGSTMNVLYGEYTCGQGSIDPMNNIISHYLYFLDLMGIGREDAGPNDELSAQ 1044
Score = 138 bits (296), Expect = 2e-031
Identities = 67/116 (57%), Positives = 72/116 (62%)
Frame = +1 / -2
Query: 328 CSAQSRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGRRLLSV 507
C+ S P S P PMRSR Y *CEI+ F+ S P P + SP* FMV P G RL V
Sbjct: 1043 CALSSSFGPASSLPIPMRSRKYK*CEIMLFIGSMEP*PHVYSP*RTFMVLPKVGPRLDKV 864
Query: 508 SFLVGFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSALIPPPA 675
SF VGFQ PTK S A+G LIGVIH IAA NASVAFCS YSG RSA PA
Sbjct: 863 SFFVGFQFPTKMS*AEG*ALLIGVIHLQIAAWNASVAFCSMYSGWFKRSAFRASPA 696
Score = 27.2 bits (53), Expect(2) = 3e-056
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -2 / +3
Query: 338 CAEQAPFNPSS 306
CAEQ PFNPS+
Sbjct: 1038 CAEQKPFNPST 1070
>gb|AY034935.1| Arabidopsis thaliana putative class I chitinase (At1g05850) mRNA,
complete cds
Length = 1322
Score = 212 bits (457), Expect(2) = 3e-056
Identities = 82/110 (74%), Positives = 94/110 (85%)
Frame = -2 / +1
Query: 674 AGGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSK 495
AG +KADLL PEY+EQNATLAF AA+WRWMTPIK++QPSAHD FVGNWKPTKNDTLSK
Sbjct: 718 AGEALKADLLNHPEYIEQNATLAFQAAIWRWMTPIKRAQPSAHDIFVGNWKPTKNDTLSK 897
Query: 494 RLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDN 345
R P FG+TMN+LYGE CG+G +D MN IISHY Y+LDLMG+GRE +G N
Sbjct: 898 RGPTFGSTMNVLYGEYTCGQGSIDPMNNIISHYLYFLDLMGIGREDAGPN 1047
Score = 134 bits (287), Expect(2) = 6e-031
Identities = 66/112 (58%), Positives = 70/112 (62%)
Frame = +1 / -1
Query: 340 SRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGRRLLSVSFLV 519
S P S P PMRSR Y *CEI+ F+ S P P + SP* FMV P G RL VSF V
Sbjct: 1052 SSFGPASSLPIPMRSRKYK*CEIMLFIGSMEP*PHVYSP*RTFMVLPKVGPRLDKVSFFV 873
Query: 520 GFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSALIPPPA 675
GFQ PTK S A+G LIGVIH IAA NASVAFCS YSG RSA PA
Sbjct: 872 GFQFPTKMS*AEG*ALLIGVIHLQIAAWNASVAFCSMYSGWFKRSAFRASPA 717
Score = 29.0 bits (57), Expect(2) = 3e-056
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / +1
Query: 350 DNRDCAEQAPFNPSS 306
D CAEQ PFNPS+
Sbjct: 1048 DELSCAEQKPFNPST 1092
Score = 22.1 bits (42), Expect(2) = 6e-031
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / -1
Query: 307 LEGLNGACSAQ 339
+EGL G CSAQ
Sbjct: 1091 VEGLKGFCSAQ 1059
>gb|AF422178.1| Arabidopsis thaliana chitinase-like protein 1 (CTL1) mRNA,
CTL1-ELP1 allele, complete cds
Length = 1193
Score = 212 bits (457), Expect(2) = 3e-056
Identities = 82/110 (74%), Positives = 94/110 (85%)
Frame = -2 / +2
Query: 674 AGGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSK 495
AG +KADLL PEY+EQNATLAF AA+WRWMTPIK++QPSAHD FVGNWKPTKNDTLSK
Sbjct: 602 AGEALKADLLNHPEYIEQNATLAFQAAIWRWMTPIKRAQPSAHDIFVGNWKPTKNDTLSK 781
Query: 494 RLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDN 345
R P FG+TMN+LYGE CG+G +D MN IISHY Y+LDLMG+GRE +G N
Sbjct: 782 RGPTFGSTMNVLYGEYTCGQGSIDPMNNIISHYLYFLDLMGIGREDAGPN 931
Score = 134 bits (287), Expect(2) = 6e-031
Identities = 66/112 (58%), Positives = 70/112 (62%)
Frame = +1 / -3
Query: 340 SRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGRRLLSVSFLV 519
S P S P PMRSR Y *CEI+ F+ S P P + SP* FMV P G RL VSF V
Sbjct: 936 SSFGPASSLPIPMRSRKYK*CEIMLFIGSMEP*PHVYSP*RTFMVLPKVGPRLDKVSFFV 757
Query: 520 GFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSALIPPPA 675
GFQ PTK S A+G LIGVIH IAA NASVAFCS YSG RSA PA
Sbjct: 756 GFQFPTKMS*AEG*ALLIGVIHLQIAAWNASVAFCSMYSGWFKRSAFRASPA 601
Score = 29.0 bits (57), Expect(2) = 3e-056
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / +2
Query: 350 DNRDCAEQAPFNPSS 306
D CAEQ PFNPS+
Sbjct: 932 DELSCAEQKPFNPST 976
Score = 22.1 bits (42), Expect(2) = 6e-031
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / -3
Query: 307 LEGLNGACSAQ 339
+EGL G CSAQ
Sbjct: 975 VEGLKGFCSAQ 943
>gb|AY113925.1| Arabidopsis thaliana putative class I chitinase (At1g05850) mRNA,
complete cds
Length = 997
Score = 212 bits (457), Expect(2) = 3e-056
Identities = 82/110 (74%), Positives = 94/110 (85%)
Frame = -2 / +1
Query: 674 AGGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSK 495
AG +KADLL PEY+EQNATLAF AA+WRWMTPIK++QPSAHD FVGNWKPTKNDTLSK
Sbjct: 568 AGEALKADLLNHPEYIEQNATLAFQAAIWRWMTPIKRAQPSAHDIFVGNWKPTKNDTLSK 747
Query: 494 RLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDN 345
R P FG+TMN+LYGE CG+G +D MN IISHY Y+LDLMG+GRE +G N
Sbjct: 748 RGPTFGSTMNVLYGEYTCGQGSIDPMNNIISHYLYFLDLMGIGREDAGPN 897
Score = 134 bits (287), Expect(2) = 6e-031
Identities = 66/112 (58%), Positives = 70/112 (62%)
Frame = +1 / -3
Query: 340 SRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGRRLLSVSFLV 519
S P S P PMRSR Y *CEI+ F+ S P P + SP* FMV P G RL VSF V
Sbjct: 902 SSFGPASSLPIPMRSRKYK*CEIMLFIGSMEP*PHVYSP*RTFMVLPKVGPRLDKVSFFV 723
Query: 520 GFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSALIPPPA 675
GFQ PTK S A+G LIGVIH IAA NASVAFCS YSG RSA PA
Sbjct: 722 GFQFPTKMS*AEG*ALLIGVIHLQIAAWNASVAFCSMYSGWFKRSAFRASPA 567
Score = 29.0 bits (57), Expect(2) = 3e-056
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / +1
Query: 350 DNRDCAEQAPFNPSS 306
D CAEQ PFNPS+
Sbjct: 898 DELSCAEQKPFNPST 942
Score = 22.1 bits (42), Expect(2) = 6e-031
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / -3
Query: 307 LEGLNGACSAQ 339
+EGL G CSAQ
Sbjct: 941 VEGLKGFCSAQ 909
>gb|AF332458.1| Arabidopsis thaliana clone C00164 (e) putative class I chitinase
(At1g05850) mRNA, complete cds
Length = 966
Score = 212 bits (457), Expect(2) = 3e-056
Identities = 82/110 (74%), Positives = 94/110 (85%)
Frame = -2 / +1
Query: 674 AGGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSK 495
AG +KADLL PEY+EQNATLAF AA+WRWMTPIK++QPSAHD FVGNWKPTKNDTLSK
Sbjct: 568 AGEALKADLLNHPEYIEQNATLAFQAAIWRWMTPIKRAQPSAHDIFVGNWKPTKNDTLSK 747
Query: 494 RLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDN 345
R P FG+TMN+LYGE CG+G +D MN IISHY Y+LDLMG+GRE +G N
Sbjct: 748 RGPTFGSTMNVLYGEYTCGQGSIDPMNNIISHYLYFLDLMGIGREDAGPN 897
Score = 134 bits (287), Expect(2) = 6e-031
Identities = 66/112 (58%), Positives = 70/112 (62%)
Frame = +1 / -2
Query: 340 SRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGRRLLSVSFLV 519
S P S P PMRSR Y *CEI+ F+ S P P + SP* FMV P G RL VSF V
Sbjct: 902 SSFGPASSLPIPMRSRKYK*CEIMLFIGSMEP*PHVYSP*RTFMVLPKVGPRLDKVSFFV 723
Query: 520 GFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSALIPPPA 675
GFQ PTK S A+G LIGVIH IAA NASVAFCS YSG RSA PA
Sbjct: 722 GFQFPTKMS*AEG*ALLIGVIHLQIAAWNASVAFCSMYSGWFKRSAFRASPA 567
Score = 29.0 bits (57), Expect(2) = 3e-056
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / +1
Query: 350 DNRDCAEQAPFNPSS 306
D CAEQ PFNPS+
Sbjct: 898 DELSCAEQKPFNPST 942
Score = 22.1 bits (42), Expect(2) = 6e-031
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / -2
Query: 307 LEGLNGACSAQ 339
+EGL G CSAQ
Sbjct: 941 VEGLKGFCSAQ 909
>gb|BP563135.1|BP563135 BP563135 RAFL13 Arabidopsis thaliana cDNA clone RAFL13-01-I01 3',
mRNA sequence
Length = 669
Score = 212 bits (457), Expect(2) = 3e-056
Identities = 82/110 (74%), Positives = 94/110 (85%)
Frame = -2 / -1
Query: 674 AGGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSK 495
AG +KADLL PEY+EQNATLAF AA+WRWMTPIK++QPSAHD FVGNWKPTKNDTLSK
Sbjct: 567 AGEALKADLLNHPEYIEQNATLAFQAAIWRWMTPIKRAQPSAHDIFVGNWKPTKNDTLSK 388
Query: 494 RLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDN 345
R P FG+TMN+LYGE CG+G +D MN IISHY Y+LDLMG+GRE +G N
Sbjct: 387 RGPTFGSTMNVLYGEYTCGQGSIDPMNNIISHYLYFLDLMGIGREDAGPN 238
Score = 134 bits (287), Expect(2) = 6e-031
Identities = 66/112 (58%), Positives = 70/112 (62%)
Frame = +1 / +2
Query: 340 SRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGRRLLSVSFLV 519
S P S P PMRSR Y *CEI+ F+ S P P + SP* FMV P G RL VSF V
Sbjct: 233 SSFGPASSLPIPMRSRKYK*CEIMLFIGSMEP*PHVYSP*RTFMVLPKVGPRLDKVSFFV 412
Query: 520 GFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSALIPPPA 675
GFQ PTK S A+G LIGVIH IAA NASVAFCS YSG RSA PA
Sbjct: 413 GFQFPTKMS*AEG*ALLIGVIHLQIAAWNASVAFCSMYSGWFKRSAFRASPA 568
Score = 29.0 bits (57), Expect(2) = 3e-056
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / -1
Query: 350 DNRDCAEQAPFNPSS 306
D CAEQ PFNPS+
Sbjct: 237 DELSCAEQKPFNPST 193
Score = 22.1 bits (42), Expect(2) = 6e-031
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / +2
Query: 307 LEGLNGACSAQ 339
+EGL G CSAQ
Sbjct: 194 VEGLKGFCSAQ 226
>gb|AV785107.1|AV785107 AV785107 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-11-M05 3',
mRNA sequence
Length = 653
Score = 212 bits (457), Expect(2) = 3e-056
Identities = 82/110 (74%), Positives = 94/110 (85%)
Frame = -2 / -2
Query: 674 AGGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSK 495
AG +KADLL PEY+EQNATLAF AA+WRWMTPIK++QPSAHD FVGNWKPTKNDTLSK
Sbjct: 589 AGEALKADLLNHPEYIEQNATLAFQAAIWRWMTPIKRAQPSAHDIFVGNWKPTKNDTLSK 410
Query: 494 RLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDN 345
R P FG+TMN+LYGE CG+G +D MN IISHY Y+LDLMG+GRE +G N
Sbjct: 409 RGPTFGSTMNVLYGEYTCGQGSIDPMNNIISHYLYFLDLMGIGREDAGPN 260
Score = 134 bits (287), Expect(2) = 6e-031
Identities = 66/112 (58%), Positives = 70/112 (62%)
Frame = +1 / +3
Query: 340 SRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGRRLLSVSFLV 519
S P S P PMRSR Y *CEI+ F+ S P P + SP* FMV P G RL VSF V
Sbjct: 255 SSFGPASSLPIPMRSRKYK*CEIMLFIGSMEP*PHVYSP*RTFMVLPKVGPRLDKVSFFV 434
Query: 520 GFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSALIPPPA 675
GFQ PTK S A+G LIGVIH IAA NASVAFCS YSG RSA PA
Sbjct: 435 GFQFPTKMS*AEG*ALLIGVIHLQIAAWNASVAFCSMYSGWFKRSAFRASPA 590
Score = 29.0 bits (57), Expect(2) = 3e-056
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / -2
Query: 350 DNRDCAEQAPFNPSS 306
D CAEQ PFNPS+
Sbjct: 259 DELSCAEQKPFNPST 215
Score = 22.1 bits (42), Expect(2) = 6e-031
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / +3
Query: 307 LEGLNGACSAQ 339
+EGL G CSAQ
Sbjct: 216 VEGLKGFCSAQ 248
>gb|AV552515.1|AV552515 AV552515 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ31g10R 5', mRNA sequence
Length = 573
Score = 212 bits (457), Expect(2) = 3e-056
Identities = 82/110 (74%), Positives = 94/110 (85%)
Frame = -2 / +2
Query: 674 AGGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSK 495
AG +KADLL PEY+EQNATLAF AA+WRWMTPIK++QPSAHD FVGNWKPTKNDTLSK
Sbjct: 179 AGEALKADLLNHPEYIEQNATLAFQAAIWRWMTPIKRAQPSAHDIFVGNWKPTKNDTLSK 358
Query: 494 RLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDN 345
R P FG+TMN+LYGE CG+G +D MN IISHY Y+LDLMG+GRE +G N
Sbjct: 359 RGPTFGSTMNVLYGEYTCGQGSIDPMNNIISHYLYFLDLMGIGREDAGPN 508
Score = 134 bits (287), Expect(2) = 6e-031
Identities = 66/112 (58%), Positives = 70/112 (62%)
Frame = +1 / -1
Query: 340 SRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGRRLLSVSFLV 519
S P S P PMRSR Y *CEI+ F+ S P P + SP* FMV P G RL VSF V
Sbjct: 513 SSFGPASSLPIPMRSRKYK*CEIMLFIGSMEP*PHVYSP*RTFMVLPKVGPRLDKVSFFV 334
Query: 520 GFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSALIPPPA 675
GFQ PTK S A+G LIGVIH IAA NASVAFCS YSG RSA PA
Sbjct: 333 GFQFPTKMS*AEG*ALLIGVIHLQIAAWNASVAFCSMYSGWFKRSAFRASPA 178
Score = 29.0 bits (57), Expect(2) = 3e-056
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / +2
Query: 350 DNRDCAEQAPFNPSS 306
D CAEQ PFNPS+
Sbjct: 509 DELSCAEQKPFNPST 553
Score = 22.1 bits (42), Expect(2) = 6e-031
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / -1
Query: 307 LEGLNGACSAQ 339
+EGL G CSAQ
Sbjct: 552 VEGLKGFCSAQ 520
>gb|AV545107.1|AV545107 AV545107 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ72a10F 3', mRNA sequence
Length = 552
Score = 212 bits (457), Expect(2) = 3e-056
Identities = 82/110 (74%), Positives = 94/110 (85%)
Frame = -2 / -1
Query: 674 AGGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSK 495
AG +KADLL PEY+EQNATLAF AA+WRWMTPIK++QPSAHD FVGNWKPTKNDTLSK
Sbjct: 432 AGEALKADLLNHPEYIEQNATLAFQAAIWRWMTPIKRAQPSAHDIFVGNWKPTKNDTLSK 253
Query: 494 RLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDN 345
R P FG+TMN+LYGE CG+G +D MN IISHY Y+LDLMG+GRE +G N
Sbjct: 252 RGPTFGSTMNVLYGEYTCGQGSIDPMNNIISHYLYFLDLMGIGREDAGPN 103
Score = 134 bits (287), Expect(2) = 6e-031
Identities = 66/112 (58%), Positives = 70/112 (62%)
Frame = +1 / +2
Query: 340 SRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGRRLLSVSFLV 519
S P S P PMRSR Y *CEI+ F+ S P P + SP* FMV P G RL VSF V
Sbjct: 98 SSFGPASSLPIPMRSRKYK*CEIMLFIGSMEP*PHVYSP*RTFMVLPKVGPRLDKVSFFV 277
Query: 520 GFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSALIPPPA 675
GFQ PTK S A+G LIGVIH IAA NASVAFCS YSG RSA PA
Sbjct: 278 GFQFPTKMS*AEG*ALLIGVIHLQIAAWNASVAFCSMYSGWFKRSAFRASPA 433
Score = 29.0 bits (57), Expect(2) = 3e-056
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / -1
Query: 350 DNRDCAEQAPFNPSS 306
D CAEQ PFNPS+
Sbjct: 102 DELSCAEQKPFNPST 58
Score = 22.1 bits (42), Expect(2) = 6e-031
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / +2
Query: 307 LEGLNGACSAQ 339
+EGL G CSAQ
Sbjct: 59 VEGLKGFCSAQ 91
>gb|AV526991.1|AV526991 AV526991 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZ25h11R 5', mRNA
sequence
Length = 510
Score = 212 bits (457), Expect(2) = 3e-056
Identities = 82/110 (74%), Positives = 94/110 (85%)
Frame = -2 / +3
Query: 674 AGGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSK 495
AG +KADLL PEY+EQNATLAF AA+WRWMTPIK++QPSAHD FVGNWKPTKNDTLSK
Sbjct: 57 AGEALKADLLNHPEYIEQNATLAFQAAIWRWMTPIKRAQPSAHDIFVGNWKPTKNDTLSK 236
Query: 494 RLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDN 345
R P FG+TMN+LYGE CG+G +D MN IISHY Y+LDLMG+GRE +G N
Sbjct: 237 RGPTFGSTMNVLYGEYTCGQGSIDPMNNIISHYLYFLDLMGIGREDAGPN 386
Score = 134 bits (287), Expect(2) = 6e-031
Identities = 66/112 (58%), Positives = 70/112 (62%)
Frame = +1 / -3
Query: 340 SRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGRRLLSVSFLV 519
S P S P PMRSR Y *CEI+ F+ S P P + SP* FMV P G RL VSF V
Sbjct: 391 SSFGPASSLPIPMRSRKYK*CEIMLFIGSMEP*PHVYSP*RTFMVLPKVGPRLDKVSFFV 212
Query: 520 GFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSALIPPPA 675
GFQ PTK S A+G LIGVIH IAA NASVAFCS YSG RSA PA
Sbjct: 211 GFQFPTKMS*AEG*ALLIGVIHLQIAAWNASVAFCSMYSGWFKRSAFRASPA 56
Score = 29.0 bits (57), Expect(2) = 3e-056
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / +3
Query: 350 DNRDCAEQAPFNPSS 306
D CAEQ PFNPS+
Sbjct: 387 DELSCAEQKPFNPST 431
Score = 22.1 bits (42), Expect(2) = 6e-031
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / -3
Query: 307 LEGLNGACSAQ 339
+EGL G CSAQ
Sbjct: 430 VEGLKGFCSAQ 398
>gb|AV782956.1|AV782956 AV782956 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-03-N08 3',
mRNA sequence
Length = 589
Score = 208 bits (449), Expect(2) = 4e-055
Identities = 80/106 (75%), Positives = 92/106 (86%)
Frame = -2 / -3
Query: 662 IKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSKRLPG 483
+KADLL PEY+EQNATLAF AA+WRWMTPIK++QPSAHD FVGNWKPTKNDTLSKR P
Sbjct: 584 LKADLLNHPEYIEQNATLAFQAAIWRWMTPIKRAQPSAHDIFVGNWKPTKNDTLSKRGPT 405
Query: 482 FGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDN 345
FG+TMN+LYGE CG+G +D MN IISHY Y+LDLMG+GRE +G N
Sbjct: 404 FGSTMNVLYGEYTCGQGSIDPMNNIISHYLYFLDLMGIGREDAGPN 267
Score = 131 bits (281), Expect(2) = 4e-030
Identities = 64/106 (60%), Positives = 68/106 (64%)
Frame = +1 / +1
Query: 340 SRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGRRLLSVSFLV 519
S P S P PMRSR Y *CEI+ F+ S P P + SP* FMV P G RL VSF V
Sbjct: 262 SSFGPASSLPIPMRSRKYK*CEIMLFIGSMEP*PHVYSP*RTFMVLPKVGPRLDKVSFFV 441
Query: 520 GFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSA 657
GFQ PTK S A+G LIGVIH IAA NASVAFCS YSG RSA
Sbjct: 442 GFQFPTKMS*AEG*ALLIGVIHLQIAAWNASVAFCSMYSGWFKRSA 579
Score = 29.0 bits (57), Expect(2) = 4e-055
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / -3
Query: 350 DNRDCAEQAPFNPSS 306
D CAEQ PFNPS+
Sbjct: 266 DELSCAEQKPFNPST 222
Score = 22.1 bits (42), Expect(2) = 4e-030
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / +1
Query: 307 LEGLNGACSAQ 339
+EGL G CSAQ
Sbjct: 223 VEGLKGFCSAQ 255
>emb|BX816658.1|CNS0AEHE Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH60ZG12 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1287
Score = 209 bits (451), Expect(2) = 7e-055
Identities = 81/115 (70%), Positives = 95/115 (82%)
Frame = -2 / +3
Query: 671 GGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSKR 492
G +KADLL PEY+EQNA LAF AA+WRWMTPIK++QPSAHD FVGNWKPTKNDTLSKR
Sbjct: 759 GSTLKADLLNHPEYIEQNAKLAFQAAIWRWMTPIKRAQPSAHDIFVGNWKPTKNDTLSKR 938
Query: 491 LPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDNRDCAEQ 327
P FG+TMN+LYGE CG+G +D MN IISHY Y+LDLMG+GRE +G N + + Q
Sbjct: 939 GPTFGSTMNVLYGEYTCGQGSIDPMNNIISHYLYFLDLMGIGREDAGPNDELSAQ 1103
Score = 133 bits (285), Expect = 6e-030
Identities = 64/110 (58%), Positives = 69/110 (62%)
Frame = +1 / -3
Query: 328 CSAQSRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGRRLLSV 507
C+ S P S P PMRSR Y *CEI+ F+ S P P + SP* FMV P G RL V
Sbjct: 1102 CALSSSFGPASSLPIPMRSRKYK*CEIMLFIGSMEP*PHVYSP*RTFMVLPKVGPRLDKV 923
Query: 508 SFLVGFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSA 657
SF VGFQ PTK S A+G LIGVIH IAA NAS AFCS YSG RSA
Sbjct: 922 SFFVGFQFPTKMS*AEG*ALLIGVIHLQIAAWNASFAFCSMYSGWFKRSA 773
Score = 27.2 bits (53), Expect(2) = 7e-055
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -2 / +2
Query: 338 CAEQAPFNPSS 306
CAEQ PFNPS+
Sbjct: 1097 CAEQKPFNPST 1129
>gb|AV520752.1|AV520752 AV520752 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZ31d08F 3', mRNA
sequence
Length = 587
Score = 205 bits (442), Expect(2) = 3e-054
Identities = 79/104 (75%), Positives = 90/104 (86%)
Frame = -2 / -3
Query: 656 ADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSKRLPGFG 477
ADLL PEY+EQNATLAF AA+WRWMTPIK++QPSAHD FVGNWKPTKNDTLSKR P FG
Sbjct: 585 ADLLNHPEYIEQNATLAFQAAIWRWMTPIKRAQPSAHDIFVGNWKPTKNDTLSKRGPTFG 406
Query: 476 ATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDN 345
+TMN+LYGE CG+G +D MN IISHY Y+LDLMG+GRE +G N
Sbjct: 405 STMNVLYGEYTCGQGSIDPMNNIISHYLYFLDLMGIGREDAGPN 274
Score = 131 bits (281), Expect(2) = 4e-030
Identities = 64/106 (60%), Positives = 68/106 (64%)
Frame = +1 / +2
Query: 340 SRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGRRLLSVSFLV 519
S P S P PMRSR Y *CEI+ F+ S P P + SP* FMV P G RL VSF V
Sbjct: 269 SSFGPASSLPIPMRSRKYK*CEIMLFIGSMEP*PHVYSP*RTFMVLPKVGPRLDKVSFFV 448
Query: 520 GFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSA 657
GFQ PTK S A+G LIGVIH IAA NASVAFCS YSG RSA
Sbjct: 449 GFQFPTKMS*AEG*ALLIGVIHLQIAAWNASVAFCSMYSGWFKRSA 586
Score = 29.0 bits (57), Expect(2) = 3e-054
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / -3
Query: 350 DNRDCAEQAPFNPSS 306
D CAEQ PFNPS+
Sbjct: 273 DELSCAEQKPFNPST 229
Score = 22.1 bits (42), Expect(2) = 4e-030
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / +2
Query: 307 LEGLNGACSAQ 339
+EGL G CSAQ
Sbjct: 230 VEGLKGFCSAQ 262
>gb|AV539778.1|AV539778 AV539778 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ139f05F 3', mRNA sequence
Length = 575
Score = 207 bits (447), Expect(2) = 8e-054
Identities = 80/105 (76%), Positives = 91/105 (86%)
Frame = -2 / -2
Query: 659 KADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSKRLPGF 480
KADLL PEY+EQNATLAF AA+WRWMTPIK++QPSAHD FVGNWKPTKNDTLSKR P F
Sbjct: 574 KADLLNHPEYIEQNATLAFQAAIWRWMTPIKRAQPSAHDIFVGNWKPTKNDTLSKRGPTF 395
Query: 479 GATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDN 345
G+TMN+LYGE CG+G +D MN IISHY Y+LDLMG+GRE +G N
Sbjct: 394 GSTMNVLYGEYTCGQGSIDPMNNIISHYLYFLDLMGIGREDAGPN 260
Score = 131 bits (281), Expect = 2e-029
Identities = 64/106 (60%), Positives = 68/106 (64%)
Frame = +1 / +3
Query: 340 SRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGRRLLSVSFLV 519
S P S P PMRSR Y *CEI+ F+ S P P + SP* FMV P G RL VSF V
Sbjct: 255 SSFGPASSLPIPMRSRKYK*CEIMLFIGSMEP*PHVYSP*RTFMVLPKVGPRLDKVSFFV 434
Query: 520 GFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSA 657
GFQ PTK S A+G LIGVIH IAA NASVAFCS YSG RSA
Sbjct: 435 GFQFPTKMS*AEG*ALLIGVIHLQIAAWNASVAFCSMYSGWFKRSA 572
Score = 25.4 bits (49), Expect(2) = 8e-054
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -2 / -2
Query: 350 DNRDCAEQAPFNPSS 306
D CAEQ FNPS+
Sbjct: 259 DELSCAEQKSFNPST 215
>gb|BX840204.1|BX840204 BX840204 Arabidopsis thaliana Hormone Treated Callus Col-0
Arabidopsis thaliana cDNA clone GSLTPGH46ZD05 5PRIM, mRNA
sequence
Length = 1039
Score = 212 bits (457), Expect = 1e-053
Identities = 82/110 (74%), Positives = 94/110 (85%)
Frame = -2 / +3
Query: 674 AGGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSK 495
AG +KADLL PEY+EQNATLAF AA+WRWMTPIK++QPSAHD FVGNWKPTKNDTLSK
Sbjct: 696 AGEALKADLLNHPEYIEQNATLAFQAAIWRWMTPIKRAQPSAHDIFVGNWKPTKNDTLSK 875
Query: 494 RLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDN 345
R P FG+TMN+LYGE CG+G +D MN IISHY Y+LDLMG+GRE +G N
Sbjct: 876 RGPTFGSTMNVLYGEYTCGQGSIDPMNNIISHYLYFLDLMGIGREDAGPN 1025
Score = 134 bits (287), Expect = 3e-030
Identities = 66/112 (58%), Positives = 70/112 (62%)
Frame = +1 / -1
Query: 340 SRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGRRLLSVSFLV 519
S P S P PMRSR Y *CEI+ F+ S P P + SP* FMV P G RL VSF V
Sbjct: 1030 SSFGPASSLPIPMRSRKYK*CEIMLFIGSMEP*PHVYSP*RTFMVLPKVGPRLDKVSFFV 851
Query: 520 GFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSALIPPPA 675
GFQ PTK S A+G LIGVIH IAA NASVAFCS YSG RSA PA
Sbjct: 850 GFQFPTKMS*AEG*ALLIGVIHLQIAAWNASVAFCSMYSGWFKRSAFRASPA 695
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 212 bits (457), Expect = 1e-053
Identities = 82/110 (74%), Positives = 94/110 (85%)
Frame = -2 / -1
Query: 674 AGGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSK 495
AG +KADLL PEY+EQNATLAF AA+WRWMTPIK++QPSAHD FVGNWKPTKNDTLSK
Sbjct: 1767230 AGEALKADLLNHPEYIEQNATLAFQAAIWRWMTPIKRAQPSAHDIFVGNWKPTKNDTLSK 1767051
Query: 494 RLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDN 345
R P FG+TMN+LYGE CG+G +D MN IISHY Y+LDLMG+GRE +G N
Sbjct: 1767050 RGPTFGSTMNVLYGEYTCGQGSIDPMNNIISHYLYFLDLMGIGREDAGPN 1766901
Score = 134 bits (287), Expect = 3e-030
Identities = 66/112 (58%), Positives = 70/112 (62%)
Frame = +1 / +1
Query: 340 SRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGRRLLSVSFLV 519
S P S P PMRSR Y *CEI+ F+ S P P + SP* FMV P G RL VSF V
Sbjct: 1766896 SSFGPASSLPIPMRSRKYK*CEIMLFIGSMEP*PHVYSP*RTFMVLPKVGPRLDKVSFFV 1767075
Query: 520 GFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSALIPPPA 675
GFQ PTK S A+G LIGVIH IAA NASVAFCS YSG RSA PA
Sbjct: 1767076 GFQFPTKMS*AEG*ALLIGVIHLQIAAWNASVAFCSMYSGWFKRSAFRASPA 1767231
>gb|AV555057.1|AV555057 AV555057 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ002h05F 3', mRNA sequence
Length = 551
Score = 194 bits (419), Expect(2) = 5e-051
Identities = 74/97 (76%), Positives = 85/97 (87%)
Frame = -2 / -2
Query: 635 EYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSKRLPGFGATMNILY 456
EY+EQNATLAF AA+WRWMTPIK++QPSAHD FVGNWKPTKNDTLSKR P FG+TMN+LY
Sbjct: 550 EYIEQNATLAFQAAIWRWMTPIKRAQPSAHDIFVGNWKPTKNDTLSKRGPTFGSTMNVLY 371
Query: 455 GESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDN 345
GE CG+G +D MN IISHY Y+LDLMG+GRE +G N
Sbjct: 370 GEYTCGQGSIDPMNNIISHYLYFLDLMGIGREDAGPN 260
Score = 124 bits (265), Expect(2) = 6e-028
Identities = 60/99 (60%), Positives = 64/99 (64%)
Frame = +1 / +3
Query: 340 SRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGRRLLSVSFLV 519
S P S P PMRSR Y *CEI+ F+ S P P + SP* FMV P G RL VSF V
Sbjct: 255 SSFGPASSLPIPMRSRKYK*CEIMLFIGSMEP*PHVYSP*RTFMVLPKVGPRLDKVSFFV 434
Query: 520 GFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYS 636
GFQ PTK S A+G LIGVIH IAA NASVAFCS YS
Sbjct: 435 GFQFPTKMS*AEG*ALLIGVIHLQIAAWNASVAFCSMYS 551
Score = 29.0 bits (57), Expect(2) = 5e-051
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / -2
Query: 350 DNRDCAEQAPFNPSS 306
D CAEQ PFNPS+
Sbjct: 259 DELSCAEQKPFNPST 215
Score = 22.1 bits (42), Expect(2) = 6e-028
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / +3
Query: 307 LEGLNGACSAQ 339
+EGL G CSAQ
Sbjct: 216 VEGLKGFCSAQ 248
>gb|AV561479.1|AV561479 AV561479 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ152c04F 3', mRNA sequence
Length = 529
Score = 194 bits (419), Expect(2) = 5e-051
Identities = 74/97 (76%), Positives = 85/97 (87%)
Frame = -2 / -2
Query: 635 EYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSKRLPGFGATMNILY 456
EY+EQNATLAF AA+WRWMTPIK++QPSAHD FVGNWKPTKNDTLSKR P FG+TMN+LY
Sbjct: 528 EYIEQNATLAFQAAIWRWMTPIKRAQPSAHDIFVGNWKPTKNDTLSKRGPTFGSTMNVLY 349
Query: 455 GESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDN 345
GE CG+G +D MN IISHY Y+LDLMG+GRE +G N
Sbjct: 348 GEYTCGQGSIDPMNNIISHYLYFLDLMGIGREDAGPN 238
Score = 124 bits (265), Expect(2) = 6e-028
Identities = 60/99 (60%), Positives = 64/99 (64%)
Frame = +1 / +2
Query: 340 SRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGRRLLSVSFLV 519
S P S P PMRSR Y *CEI+ F+ S P P + SP* FMV P G RL VSF V
Sbjct: 233 SSFGPASSLPIPMRSRKYK*CEIMLFIGSMEP*PHVYSP*RTFMVLPKVGPRLDKVSFFV 412
Query: 520 GFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYS 636
GFQ PTK S A+G LIGVIH IAA NASVAFCS YS
Sbjct: 413 GFQFPTKMS*AEG*ALLIGVIHLQIAAWNASVAFCSMYS 529
Score = 29.0 bits (57), Expect(2) = 5e-051
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / -2
Query: 350 DNRDCAEQAPFNPSS 306
D CAEQ PFNPS+
Sbjct: 237 DELSCAEQKPFNPST 193
Score = 22.1 bits (42), Expect(2) = 6e-028
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / +2
Query: 307 LEGLNGACSAQ 339
+EGL G CSAQ
Sbjct: 194 VEGLKGFCSAQ 226
>gb|AV545115.1|AV545115 AV545115 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ72d01F 3', mRNA sequence
Length = 440
Score = 192 bits (414), Expect(2) = 2e-050
Identities = 73/96 (76%), Positives = 84/96 (87%)
Frame = -2 / -3
Query: 632 YLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSKRLPGFGATMNILYG 453
Y+EQNATLAF AA+WRWMTPIK++QPSAHD FVGNWKPTKNDTLSKR P FG+TMN+LYG
Sbjct: 438 YIEQNATLAFQAAIWRWMTPIKRAQPSAHDIFVGNWKPTKNDTLSKRGPTFGSTMNVLYG 259
Query: 452 ESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDN 345
E CG+G +D MN IISHY Y+LDLMG+GRE +G N
Sbjct: 258 EYTCGQGSIDPMNNIISHYLYFLDLMGIGREDAGPN 151
Score = 122 bits (261), Expect(2) = 2e-027
Identities = 59/98 (60%), Positives = 63/98 (64%)
Frame = +1 / +2
Query: 340 SRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGRRLLSVSFLV 519
S P S P PMRSR Y *CEI+ F+ S P P + SP* FMV P G RL VSF V
Sbjct: 146 SSFGPASSLPIPMRSRKYK*CEIMLFIGSMEP*PHVYSP*RTFMVLPKVGPRLDKVSFFV 325
Query: 520 GFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRY 633
GFQ PTK S A+G LIGVIH IAA NASVAFCS Y
Sbjct: 326 GFQFPTKMS*AEG*ALLIGVIHLQIAAWNASVAFCSMY 439
Score = 29.0 bits (57), Expect(2) = 2e-050
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / -3
Query: 350 DNRDCAEQAPFNPSS 306
D CAEQ PFNPS+
Sbjct: 150 DELSCAEQKPFNPST 106
Score = 22.1 bits (42), Expect(2) = 2e-027
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / +2
Query: 307 LEGLNGACSAQ 339
+EGL G CSAQ
Sbjct: 107 VEGLKGFCSAQ 139
>gb|CB259194.1|CB259194 69-E9624-013-004-J17-T7R MPIZ-ADIS-013 Arabidopsis thaliana cDNA
clone MPIZp770J174Q 5-PRIME, mRNA sequence
Length = 622
Score = 198 bits (427), Expect = 1e-049
Identities = 77/101 (76%), Positives = 87/101 (86%)
Frame = -2 / +3
Query: 674 AGGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSK 495
AG +KADLL PEY+EQNATLAF AA+WRWMTPIK++QPSAHD FVGNWKPTKNDTLSK
Sbjct: 318 AGEALKADLLNHPEYIEQNATLAFQAAIWRWMTPIKRAQPSAHDIFVGNWKPTKNDTLSK 497
Query: 494 RLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMG 372
R P FG+TMN+LYGE CG+G +D MN IISHY Y+LDLMG
Sbjct: 498 RGPTFGSTMNVLYGEYTCGQGSIDPMNNIISHYLYFLDLMG 620
Score = 127 bits (271), Expect = 5e-028
Identities = 62/101 (61%), Positives = 66/101 (65%)
Frame = +1 / -1
Query: 373 PMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGRRLLSVSFLVGFQLPTKASCA 552
PMRSR Y *CEI+ F+ S P P + SP* FMV P G RL VSF VGFQ PTK S A
Sbjct: 619 PMRSRKYK*CEIMLFIGSMEP*PHVYSP*RTFMVLPKVGPRLDKVSFFVGFQFPTKMS*A 440
Query: 553 DGWLFLIGVIHRHIAAMNASVAFCSRYSGXXSRSALIPPPA 675
+G LIGVIH IAA NASVAFCS YSG RSA PA
Sbjct: 439 EG*ALLIGVIHLQIAAWNASVAFCSMYSGWFKRSAFRASPA 317
>gb|AV540567.1|AV540567 AV540567 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ151h08F 3', mRNA sequence
Length = 541
Score = 188 bits (405), Expect(2) = 4e-049
Identities = 72/94 (76%), Positives = 82/94 (87%)
Frame = -2 / -1
Query: 626 EQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSKRLPGFGATMNILYGES 447
EQNATLAF AA+WRWMTPIK++QPSAHD FVGNWKPTKNDTLSKR P FG+TMN+LYGE
Sbjct: 541 EQNATLAFQAAIWRWMTPIKRAQPSAHDIFVGNWKPTKNDTLSKRGPTFGSTMNVLYGEY 362
Query: 446 ICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDN 345
CG+G +D MN IISHY Y+LDLMG+GRE +G N
Sbjct: 361 TCGQGSIDPMNNIISHYLYFLDLMGIGREDAGPN 260
Score = 117 bits (251), Expect(2) = 5e-026
Identities = 57/95 (60%), Positives = 61/95 (64%)
Frame = +1 / +3
Query: 340 SRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGRRLLSVSFLV 519
S P S P PMRSR Y *CEI+ F+ S P P + SP* FMV P G RL VSF V
Sbjct: 255 SSFGPASSLPIPMRSRKYK*CEIMLFIGSMEP*PHVYSP*RTFMVLPKVGPRLDKVSFFV 434
Query: 520 GFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFC 624
GFQ PTK S A+G LIGVIH IAA NASVAFC
Sbjct: 435 GFQFPTKMS*AEG*ALLIGVIHLQIAAWNASVAFC 539
Score = 29.0 bits (57), Expect(2) = 4e-049
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / -1
Query: 350 DNRDCAEQAPFNPSS 306
D CAEQ PFNPS+
Sbjct: 259 DELSCAEQKPFNPST 215
Score = 22.1 bits (42), Expect(2) = 5e-026
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / +3
Query: 307 LEGLNGACSAQ 339
+EGL G CSAQ
Sbjct: 216 VEGLKGFCSAQ 248
>gb|AV562663.1|AV562663 AV562663 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ173g07F 3', mRNA sequence
Length = 506
Score = 183 bits (395), Expect(2) = 9e-048
Identities = 70/92 (76%), Positives = 80/92 (86%)
Frame = -2 / -2
Query: 620 NATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSKRLPGFGATMNILYGESIC 441
NATLAF AA+WRWMTPIK++QPSAHD FVGNWKPTKNDTLSKR P FG+TMN+LYGE C
Sbjct: 505 NATLAFQAAIWRWMTPIKRAQPSAHDIFVGNWKPTKNDTLSKRGPTFGSTMNVLYGEYTC 326
Query: 440 GKGYVDAMNVIISHYQYYLDLMGVGREHSGDN 345
G+G +D MN IISHY Y+LDLMG+GRE +G N
Sbjct: 325 GQGSIDPMNNIISHYLYFLDLMGIGREDAGPN 230
Score = 113 bits (242), Expect(2) = 8e-025
Identities = 56/94 (59%), Positives = 60/94 (63%)
Frame = +1 / +3
Query: 340 SRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGRRLLSVSFLV 519
S P S P PMRSR Y *CEI+ F+ S P P + SP* FMV P G RL VSF V
Sbjct: 225 SSFGPASSLPIPMRSRKYK*CEIMLFIGSMEP*PHVYSP*RTFMVLPKVGPRLDKVSFFV 404
Query: 520 GFQLPTKASCADGWLFLIGVIHRHIAAMNASVAF 621
GFQ PTK S A+G LIGVIH IAA NASVAF
Sbjct: 405 GFQFPTKMS*AEG*ALLIGVIHLQIAAWNASVAF 506
Score = 29.0 bits (57), Expect(2) = 9e-048
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / -2
Query: 350 DNRDCAEQAPFNPSS 306
D CAEQ PFNPS+
Sbjct: 229 DELSCAEQKPFNPST 185
Score = 22.1 bits (42), Expect(2) = 8e-025
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / +3
Query: 307 LEGLNGACSAQ 339
+EGL G CSAQ
Sbjct: 186 VEGLKGFCSAQ 218
>gb|AV562712.1|AV562712 AV562712 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ174g04F 3', mRNA sequence
Length = 525
Score = 175 bits (376), Expect(2) = 4e-045
Identities = 66/88 (75%), Positives = 76/88 (86%)
Frame = -2 / -1
Query: 608 AFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSKRLPGFGATMNILYGESICGKGY 429
AF AA+WRWMTPIK++QPSAHD FVGNWKPTKNDTLSKR P FG+TMN+LYGE CG+G
Sbjct: 525 AFQAAIWRWMTPIKRAQPSAHDIFVGNWKPTKNDTLSKRGPTFGSTMNVLYGEYTCGQGS 346
Query: 428 VDAMNVIISHYQYYLDLMGVGREHSGDN 345
+D MN IISHY Y+LDLMG+GRE +G N
Sbjct: 345 IDPMNNIISHYLYFLDLMGIGREDAGPN 262
Score = 103 bits (220), Expect(2) = 8e-022
Identities = 51/89 (57%), Positives = 55/89 (61%)
Frame = +1 / +2
Query: 340 SRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGRRLLSVSFLV 519
S P S P PMRSR Y *CEI+ F+ S P P + SP* FMV P G RL VSF V
Sbjct: 257 SSFGPASSLPIPMRSRKYK*CEIMLFIGSMEP*PHVYSP*RTFMVLPKVGPRLDKVSFFV 436
Query: 520 GFQLPTKASCADGWLFLIGVIHRHIAAMN 606
GFQ PTK S A+G LIGVIH IAA N
Sbjct: 437 GFQFPTKMS*AEG*ALLIGVIHLQIAAWN 523
Score = 29.0 bits (57), Expect(2) = 4e-045
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / -1
Query: 350 DNRDCAEQAPFNPSS 306
D CAEQ PFNPS+
Sbjct: 261 DELSCAEQKPFNPST 217
Score = 22.1 bits (42), Expect(2) = 8e-022
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / +2
Query: 307 LEGLNGACSAQ 339
+EGL G CSAQ
Sbjct: 218 VEGLKGFCSAQ 250
>dbj|AB026636.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K14A17
Length = 92620
Score = 152 bits (327), Expect(2) = 3e-044
Identities = 57/81 (70%), Positives = 64/81 (79%)
Frame = -2 / -3
Query: 671 GGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSKR 492
G +K DLL PEYLE NATLAF AA+WRWMTP KK PSAHD FVG WKPTKNDT +KR
Sbjct: 8870 GEALKVDLLSHPEYLENNATLAFQAAIWRWMTPPKKHLPSAHDVFVGKWKPTKNDTAAKR 8691
Query: 491 LPGFGATMNILYGESICGKGY 429
PGFGAT+N+LYG+ IC G+
Sbjct: 8690 TPGFGATINVLYGDQICNSGF 8628
Score = 109 bits (232), Expect(2) = 9e-027
Identities = 52/80 (65%), Positives = 54/80 (67%)
Frame = +1 / +1
Query: 433 PLPQIDSP*SMFMVAPNPGRRLLSVSFLVGFQLPTKASCADGWLFLIGVIHRHIAAMNAS 612
PL QI SP* FMVAPNPG R +VSF VGF PTK SCADG F GVIHR IAA NA+
Sbjct: 8632 PLLQI*SP*RTFMVAPNPGVRFAAVSFFVGFHFPTKTSCADGKCFFGGVIHRQIAA*NAN 8811
Query: 613 VAFCSRYSGXXSRSALIPPP 672
VA SRYSG SRS P
Sbjct: 8812 VALFSRYSG*LSRSTFKASP 8871
Score = 48.3 bits (99), Expect(2) = 3e-044
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = -2 / -3
Query: 425 DAMNVIISHYQYYLDLMGVGREHSG 351
D MN I+SHY YYLDL+GVGRE +G
Sbjct: 8621 DEMNNIVSHYLYYLDLIGVGREEAG 8547
Score = 33.1 bits (66), Expect(2) = 9e-027
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +1 / +1
Query: 352 PECSRPTPMRSR*YW*CEIITFMAS 426
P SRPTP+RSR*Y * E + F++S
Sbjct: 8548 PASSRPTPIRSR*YK**ETMLFISS 8622
>ref|NM_112568.3| Arabidopsis thaliana chitinase AT3G16920 mRNA, complete cds
Length = 1213
Score = 152 bits (327), Expect(2) = 3e-044
Identities = 57/81 (70%), Positives = 64/81 (79%)
Frame = -2 / +2
Query: 671 GGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSKR 492
G +K DLL PEYLE NATLAF AA+WRWMTP KK PSAHD FVG WKPTKNDT +KR
Sbjct: 629 GEALKVDLLSHPEYLENNATLAFQAAIWRWMTPPKKHLPSAHDVFVGKWKPTKNDTAAKR 808
Query: 491 LPGFGATMNILYGESICGKGY 429
PGFGAT+N+LYG+ IC G+
Sbjct: 809 TPGFGATINVLYGDQICNSGF 871
Score = 109 bits (232), Expect(2) = 9e-027
Identities = 52/80 (65%), Positives = 54/80 (67%)
Frame = +1 / -2
Query: 433 PLPQIDSP*SMFMVAPNPGRRLLSVSFLVGFQLPTKASCADGWLFLIGVIHRHIAAMNAS 612
PL QI SP* FMVAPNPG R +VSF VGF PTK SCADG F GVIHR IAA NA+
Sbjct: 867 PLLQI*SP*RTFMVAPNPGVRFAAVSFFVGFHFPTKTSCADGKCFFGGVIHRQIAA*NAN 688
Query: 613 VAFCSRYSGXXSRSALIPPP 672
VA SRYSG SRS P
Sbjct: 687 VALFSRYSG*LSRSTFKASP 628
Score = 48.3 bits (99), Expect(2) = 3e-044
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = -2 / +2
Query: 425 DAMNVIISHYQYYLDLMGVGREHSG 351
D MN I+SHY YYLDL+GVGRE +G
Sbjct: 878 DEMNNIVSHYLYYLDLIGVGREEAG 952
Score = 33.1 bits (66), Expect(2) = 9e-027
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +1 / -2
Query: 352 PECSRPTPMRSR*YW*CEIITFMAS 426
P SRPTP+RSR*Y * E + F++S
Sbjct: 951 PASSRPTPIRSR*YK**ETMLFISS 877
>gb|AF412071.1|AF412071 Arabidopsis thaliana AT3g16920/K14A17_4 mRNA, complete cds
Length = 1204
Score = 152 bits (327), Expect(2) = 3e-044
Identities = 57/81 (70%), Positives = 64/81 (79%)
Frame = -2 / +1
Query: 671 GGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSKR 492
G +K DLL PEYLE NATLAF AA+WRWMTP KK PSAHD FVG WKPTKNDT +KR
Sbjct: 625 GEALKVDLLSHPEYLENNATLAFQAAIWRWMTPPKKHLPSAHDVFVGKWKPTKNDTAAKR 804
Query: 491 LPGFGATMNILYGESICGKGY 429
PGFGAT+N+LYG+ IC G+
Sbjct: 805 TPGFGATINVLYGDQICNSGF 867
Score = 109 bits (232), Expect(2) = 9e-027
Identities = 52/80 (65%), Positives = 54/80 (67%)
Frame = +1 / -3
Query: 433 PLPQIDSP*SMFMVAPNPGRRLLSVSFLVGFQLPTKASCADGWLFLIGVIHRHIAAMNAS 612
PL QI SP* FMVAPNPG R +VSF VGF PTK SCADG F GVIHR IAA NA+
Sbjct: 863 PLLQI*SP*RTFMVAPNPGVRFAAVSFFVGFHFPTKTSCADGKCFFGGVIHRQIAA*NAN 684
Query: 613 VAFCSRYSGXXSRSALIPPP 672
VA SRYSG SRS P
Sbjct: 683 VALFSRYSG*LSRSTFKASP 624
Score = 48.3 bits (99), Expect(2) = 3e-044
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = -2 / +1
Query: 425 DAMNVIISHYQYYLDLMGVGREHSG 351
D MN I+SHY YYLDL+GVGRE +G
Sbjct: 874 DEMNNIVSHYLYYLDLIGVGREEAG 948
Score = 33.1 bits (66), Expect(2) = 9e-027
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +1 / -3
Query: 352 PECSRPTPMRSR*YW*CEIITFMAS 426
P SRPTP+RSR*Y * E + F++S
Sbjct: 947 PASSRPTPIRSR*YK**ETMLFISS 873
>gb|AY090261.1| Arabidopsis thaliana AT3g16920/K14A17_4 mRNA, complete cds
Length = 1002
Score = 152 bits (327), Expect(2) = 3e-044
Identities = 57/81 (70%), Positives = 64/81 (79%)
Frame = -2 / +1
Query: 671 GGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSKR 492
G +K DLL PEYLE NATLAF AA+WRWMTP KK PSAHD FVG WKPTKNDT +KR
Sbjct: 595 GEALKVDLLSHPEYLENNATLAFQAAIWRWMTPPKKHLPSAHDVFVGKWKPTKNDTAAKR 774
Query: 491 LPGFGATMNILYGESICGKGY 429
PGFGAT+N+LYG+ IC G+
Sbjct: 775 TPGFGATINVLYGDQICNSGF 837
Score = 109 bits (232), Expect(2) = 9e-027
Identities = 52/80 (65%), Positives = 54/80 (67%)
Frame = +1 / -2
Query: 433 PLPQIDSP*SMFMVAPNPGRRLLSVSFLVGFQLPTKASCADGWLFLIGVIHRHIAAMNAS 612
PL QI SP* FMVAPNPG R +VSF VGF PTK SCADG F GVIHR IAA NA+
Sbjct: 833 PLLQI*SP*RTFMVAPNPGVRFAAVSFFVGFHFPTKTSCADGKCFFGGVIHRQIAA*NAN 654
Query: 613 VAFCSRYSGXXSRSALIPPP 672
VA SRYSG SRS P
Sbjct: 653 VALFSRYSG*LSRSTFKASP 594
Score = 48.3 bits (99), Expect(2) = 3e-044
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = -2 / +1
Query: 425 DAMNVIISHYQYYLDLMGVGREHSG 351
D MN I+SHY YYLDL+GVGRE +G
Sbjct: 844 DEMNNIVSHYLYYLDLIGVGREEAG 918
Score = 33.1 bits (66), Expect(2) = 9e-027
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +1 / -2
Query: 352 PECSRPTPMRSR*YW*CEIITFMAS 426
P SRPTP+RSR*Y * E + F++S
Sbjct: 917 PASSRPTPIRSR*YK**ETMLFISS 843
>gb|BE038005.1|BE038005 AA07F03 AA Arabidopsis thaliana cDNA 5' similar to chitinase, mRNA
sequence
Length = 730
Score = 152 bits (327), Expect(2) = 3e-044
Identities = 57/81 (70%), Positives = 64/81 (79%)
Frame = -2 / -2
Query: 671 GGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSKR 492
G +K DLL PEYLE NATLAF AA+WRWMTP KK PSAHD FVG WKPTKNDT +KR
Sbjct: 582 GEALKVDLLSHPEYLENNATLAFQAAIWRWMTPPKKHLPSAHDVFVGKWKPTKNDTAAKR 403
Query: 491 LPGFGATMNILYGESICGKGY 429
PGFGAT+N+LYG+ IC G+
Sbjct: 402 TPGFGATINVLYGDQICNSGF 340
Score = 109 bits (232), Expect(2) = 9e-027
Identities = 52/80 (65%), Positives = 54/80 (67%)
Frame = +1 / +2
Query: 433 PLPQIDSP*SMFMVAPNPGRRLLSVSFLVGFQLPTKASCADGWLFLIGVIHRHIAAMNAS 612
PL QI SP* FMVAPNPG R +VSF VGF PTK SCADG F GVIHR IAA NA+
Sbjct: 344 PLLQI*SP*RTFMVAPNPGVRFAAVSFFVGFHFPTKTSCADGKCFFGGVIHRQIAA*NAN 523
Query: 613 VAFCSRYSGXXSRSALIPPP 672
VA SRYSG SRS P
Sbjct: 524 VALFSRYSG*LSRSTFKASP 583
Score = 48.3 bits (99), Expect(2) = 3e-044
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = -2 / -2
Query: 425 DAMNVIISHYQYYLDLMGVGREHSG 351
D MN I+SHY YYLDL+GVGRE +G
Sbjct: 333 DEMNNIVSHYLYYLDLIGVGREEAG 259
Score = 33.1 bits (66), Expect(2) = 9e-027
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +1 / +2
Query: 352 PECSRPTPMRSR*YW*CEIITFMAS 426
P SRPTP+RSR*Y * E + F++S
Sbjct: 260 PASSRPTPIRSR*YK**ETMLFISS 334
>gb|AV783775.1|AV783775 AV783775 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-13-A08 3',
mRNA sequence
Length = 702
Score = 152 bits (327), Expect(2) = 3e-044
Identities = 57/81 (70%), Positives = 64/81 (79%)
Frame = -2 / -3
Query: 671 GGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSKR 492
G +K DLL PEYLE NATLAF AA+WRWMTP KK PSAHD FVG WKPTKNDT +KR
Sbjct: 538 GEALKVDLLSHPEYLENNATLAFQAAIWRWMTPPKKHLPSAHDVFVGKWKPTKNDTAAKR 359
Query: 491 LPGFGATMNILYGESICGKGY 429
PGFGAT+N+LYG+ IC G+
Sbjct: 358 TPGFGATINVLYGDQICNSGF 296
Score = 109 bits (232), Expect(2) = 9e-027
Identities = 52/80 (65%), Positives = 54/80 (67%)
Frame = +1 / +3
Query: 433 PLPQIDSP*SMFMVAPNPGRRLLSVSFLVGFQLPTKASCADGWLFLIGVIHRHIAAMNAS 612
PL QI SP* FMVAPNPG R +VSF VGF PTK SCADG F GVIHR IAA NA+
Sbjct: 300 PLLQI*SP*RTFMVAPNPGVRFAAVSFFVGFHFPTKTSCADGKCFFGGVIHRQIAA*NAN 479
Query: 613 VAFCSRYSGXXSRSALIPPP 672
VA SRYSG SRS P
Sbjct: 480 VALFSRYSG*LSRSTFKASP 539
Score = 48.3 bits (99), Expect(2) = 3e-044
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = -2 / -3
Query: 425 DAMNVIISHYQYYLDLMGVGREHSG 351
D MN I+SHY YYLDL+GVGRE +G
Sbjct: 289 DEMNNIVSHYLYYLDLIGVGREEAG 215
Score = 33.1 bits (66), Expect(2) = 9e-027
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +1 / +3
Query: 352 PECSRPTPMRSR*YW*CEIITFMAS 426
P SRPTP+RSR*Y * E + F++S
Sbjct: 216 PASSRPTPIRSR*YK**ETMLFISS 290
>gb|AV566514.1|AV566514 AV566514 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ245a03F 3', mRNA sequence
Length = 532
Score = 170 bits (366), Expect(2) = 8e-044
Identities = 64/85 (75%), Positives = 74/85 (87%)
Frame = -2 / -2
Query: 599 AAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSKRLPGFGATMNILYGESICGKGYVDA 420
AA+WRWMTPIK++QPSAHD FVGNWKPTKNDTLSKR P FG+TMN+LYGE CG+G +D
Sbjct: 531 AAIWRWMTPIKRAQPSAHDIFVGNWKPTKNDTLSKRGPTFGSTMNVLYGEYTCGQGSIDP 352
Query: 419 MNVIISHYQYYLDLMGVGREHSGDN 345
MN IISHY Y+LDLMG+GRE +G N
Sbjct: 351 MNNIISHYLYFLDLMGIGREDAGPN 277
Score = 101 bits (215), Expect(2) = 4e-021
Identities = 50/87 (57%), Positives = 54/87 (62%)
Frame = +1 / +2
Query: 340 SRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGRRLLSVSFLV 519
S P S P PMRSR Y *CEI+ F+ S P P + SP* FMV P G RL VSF V
Sbjct: 272 SSFGPASSLPIPMRSRKYK*CEIMLFIGSMEP*PHVYSP*RTFMVLPKVGPRLDKVSFFV 451
Query: 520 GFQLPTKASCADGWLFLIGVIHRHIAA 600
GFQ PTK S A+G LIGVIH IAA
Sbjct: 452 GFQFPTKMS*AEG*ALLIGVIHLQIAA 532
Score = 29.0 bits (57), Expect(2) = 8e-044
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / -2
Query: 350 DNRDCAEQAPFNPSS 306
D CAEQ PFNPS+
Sbjct: 276 DELSCAEQKPFNPST 232
Score = 22.1 bits (42), Expect(2) = 4e-021
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / +2
Query: 307 LEGLNGACSAQ 339
+EGL G CSAQ
Sbjct: 233 VEGLKGFCSAQ 265
>gb|AV550792.1|AV550792 AV550792 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ117d02R 5', mRNA sequence
Length = 492
Score = 170 bits (366), Expect(2) = 3e-043
Identities = 64/90 (71%), Positives = 76/90 (84%)
Frame = -2 / -1
Query: 596 AMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSKRLPGFGATMNILYGESICGKGYVDAM 417
A+WRWMTPIK++QPSAHD FVGNWKPTKNDTLSKR P FG+TMN+LYGE CG+G +D M
Sbjct: 492 AIWRWMTPIKRAQPSAHDIFVGNWKPTKNDTLSKRGPTFGSTMNVLYGEYTCGQGSIDPM 313
Query: 416 NVIISHYQYYLDLMGVGREHSGDNRDCAEQ 327
N IISHY Y+LDLMG+GRE +G N + + Q
Sbjct: 312 NNIISHYLYFLDLMGIGREDAGPNDELSAQ 223
Score = 27.2 bits (53), Expect(2) = 3e-043
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -2 / -3
Query: 338 CAEQAPFNPSS 306
CAEQ PFNPS+
Sbjct: 229 CAEQKPFNPST 197
>gb|AV439664.1|AV439664 AV439664 Arabidopsis thaliana above-ground organ two to six-week
old Arabidopsis thaliana cDNA clone APD10a11_f 3', mRNA
sequence
Length = 602
Score = 168 bits (361), Expect(2) = 3e-042
Identities = 64/88 (72%), Positives = 75/88 (85%)
Frame = -2 / -1
Query: 614 TLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSKRLPGFGATMNILYGESICGK 435
TLAF AA+WRWMTPIK++QPSAHD FVG+WKPTK D LSKR P FG+TMN+LYGE CG+
Sbjct: 602 TLAFQAAIWRWMTPIKRAQPSAHDIFVGSWKPTKKDALSKRGPTFGSTMNVLYGEYACGQ 423
Query: 434 GYVDAMNVIISHYQYYLDLMGVGREHSG 351
G +DAMN IIS Y Y+LDLMG+GRE +G
Sbjct: 422 GSIDAMNNIISRYLYFLDLMGIGREDAG 339
Score = 103 bits (220), Expect(2) = 8e-022
Identities = 54/91 (59%), Positives = 57/91 (62%)
Frame = +1 / +1
Query: 340 SRLSPECSRPTPMRSR*YW*CEIITFMASTYPLPQIDSP*SMFMVAPNPGRRLLSVSFLV 519
S L P S P PMRSR Y * EI+ F+AS P P SP* FMV P G RL SF V
Sbjct: 328 SSLGPASSLPIPMRSRKYK*REIMLFIASMEP*PHAYSP*RTFMVLPKVGPRLDKASFFV 507
Query: 520 GFQLPTKASCADGWLFLIGVIHRHIAAMNAS 612
GFQLPTK S A+G LIGVIH IAA NAS
Sbjct: 508 GFQLPTKMS*AEG*ALLIGVIHLQIAAWNAS 600
Score = 26.3 bits (51), Expect(2) = 3e-042
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -2 / -1
Query: 350 DNRDCAEQAPFNPSS 306
D CAEQ PF PS+
Sbjct: 332 DELSCAEQKPFKPST 288
Score = 22.1 bits (42), Expect(2) = 8e-022
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / +1
Query: 307 LEGLNGACSAQ 339
+EGL G CSAQ
Sbjct: 289 VEGLKGFCSAQ 321
>gb|AV560501.1|AV560501 AV560501 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ135g02F 3', mRNA sequence
Length = 561
Score = 144 bits (310), Expect(2) = 7e-042
Identities = 54/74 (72%), Positives = 60/74 (81%)
Frame = -2 / -3
Query: 650 LLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSKRLPGFGAT 471
LL PEYLE NATLAF AA+WRWMTP KK PSAHD FVG WKPTKNDT +KR PGFGAT
Sbjct: 559 LLSHPEYLENNATLAFQAAIWRWMTPPKKHLPSAHDVFVGKWKPTKNDTAAKRTPGFGAT 380
Query: 470 MNILYGESICGKGY 429
+N+LYG+ IC G+
Sbjct: 379 INVLYGDQICNSGF 338
Score = 106 bits (226), Expect(2) = 6e-026
Identities = 50/73 (68%), Positives = 52/73 (71%)
Frame = +1 / +3
Query: 433 PLPQIDSP*SMFMVAPNPGRRLLSVSFLVGFQLPTKASCADGWLFLIGVIHRHIAAMNAS 612
PL QI SP* FMVAPNPG R +VSF VGF PTK SCADG F GVIHR IAA NA+
Sbjct: 342 PLLQI*SP*RTFMVAPNPGVRFAAVSFFVGFHFPTKTSCADGKCFFGGVIHRQIAA*NAN 521
Query: 613 VAFCSRYSGXXSR 651
VA SRYSG SR
Sbjct: 522 VALFSRYSG*LSR 560
Score = 48.3 bits (99), Expect(2) = 7e-042
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = -2 / -3
Query: 425 DAMNVIISHYQYYLDLMGVGREHSG 351
D MN I+SHY YYLDL+GVGRE +G
Sbjct: 331 DEMNNIVSHYLYYLDLIGVGREEAG 257
Score = 33.1 bits (66), Expect(2) = 6e-026
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +1 / +3
Query: 352 PECSRPTPMRSR*YW*CEIITFMAS 426
P SRPTP+RSR*Y * E + F++S
Sbjct: 258 PASSRPTPIRSR*YK**ETMLFISS 332
>gb|N37676.1|N37676 18903 Lambda-PRL2 Arabidopsis thaliana cDNA clone 208E21T7 3', mRNA
sequence
Length = 488
Score = 144 bits (310), Expect(2) = 7e-042
Identities = 54/74 (72%), Positives = 60/74 (81%)
Frame = -2 / +1
Query: 650 LLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSKRLPGFGAT 471
LL PEYLE NATLAF AA+WRWMTP KK PSAHD FVG WKPTKNDT +KR PGFGAT
Sbjct: 4 LLSHPEYLENNATLAFQAAIWRWMTPPKKHLPSAHDVFVGKWKPTKNDTAAKRTPGFGAT 183
Query: 470 MNILYGESICGKGY 429
+N+LYG+ IC G+
Sbjct: 184 INVLYGDQICNSGF 225
Score = 106 bits (226), Expect(2) = 6e-026
Identities = 50/73 (68%), Positives = 52/73 (71%)
Frame = +1 / -1
Query: 433 PLPQIDSP*SMFMVAPNPGRRLLSVSFLVGFQLPTKASCADGWLFLIGVIHRHIAAMNAS 612
PL QI SP* FMVAPNPG R +VSF VGF PTK SCADG F GVIHR IAA NA+
Sbjct: 221 PLLQI*SP*RTFMVAPNPGVRFAAVSFFVGFHFPTKTSCADGKCFFGGVIHRQIAA*NAN 42
Query: 613 VAFCSRYSGXXSR 651
VA SRYSG SR
Sbjct: 41 VALFSRYSG*LSR 3
Score = 48.3 bits (99), Expect(2) = 7e-042
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = -2 / +1
Query: 425 DAMNVIISHYQYYLDLMGVGREHSG 351
D MN I+SHY YYLDL+GVGRE +G
Sbjct: 232 DEMNNIVSHYLYYLDLIGVGREEAG 306
Score = 33.1 bits (66), Expect(2) = 6e-026
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +1 / -1
Query: 352 PECSRPTPMRSR*YW*CEIITFMAS 426
P SRPTP+RSR*Y * E + F++S
Sbjct: 305 PASSRPTPIRSR*YK**ETMLFISS 231
>gb|AV562373.1|AV562373 AV562373 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ169b01F 3', mRNA sequence
Length = 506
Score = 136 bits (291), Expect(2) = 3e-039
Identities = 50/68 (73%), Positives = 56/68 (82%)
Frame = -2 / -2
Query: 632 YLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSKRLPGFGATMNILYG 453
YLE NATLAF AA+WRWMTP KK PSAHD FVG WKPTKNDT +KR PGFGAT+N+LYG
Sbjct: 505 YLENNATLAFQAAIWRWMTPPKKHLPSAHDVFVGKWKPTKNDTAAKRTPGFGATINVLYG 326
Query: 452 ESICGKGY 429
+ IC G+
Sbjct: 325 DQICNSGF 302
Score = 100 bits (212), Expect(2) = 5e-024
Identities = 46/67 (68%), Positives = 48/67 (71%)
Frame = +1 / +3
Query: 433 PLPQIDSP*SMFMVAPNPGRRLLSVSFLVGFQLPTKASCADGWLFLIGVIHRHIAAMNAS 612
PL QI SP* FMVAPNPG R +VSF VGF PTK SCADG F GVIHR IAA NA+
Sbjct: 306 PLLQI*SP*RTFMVAPNPGVRFAAVSFFVGFHFPTKTSCADGKCFFGGVIHRQIAA*NAN 485
Query: 613 VAFCSRY 633
VA SRY
Sbjct: 486 VALFSRY 506
Score = 48.3 bits (99), Expect(2) = 3e-039
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = -2 / -2
Query: 425 DAMNVIISHYQYYLDLMGVGREHSG 351
D MN I+SHY YYLDL+GVGRE +G
Sbjct: 295 DEMNNIVSHYLYYLDLIGVGREEAG 221
Score = 33.1 bits (66), Expect(2) = 5e-024
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +1 / +3
Query: 352 PECSRPTPMRSR*YW*CEIITFMAS 426
P SRPTP+RSR*Y * E + F++S
Sbjct: 222 PASSRPTPIRSR*YK**ETMLFISS 296
>gb|AV439686.2|AV439686 AV439686 Arabidopsis thaliana above-ground organ two to six-week
old Arabidopsis thaliana cDNA clone APD11f05_f 3', mRNA
sequence
Length = 537
Score = 154 bits (330), Expect(2) = 7e-039
Identities = 59/79 (74%), Positives = 68/79 (86%)
Frame = -2 / -2
Query: 581 MTPIKKSQPSAHDAFVGNWKPTKNDTLSKRLPGFGATMNILYGESICGKGYVDAMNVIIS 402
MTPIK++QPSAHD FVGNWKPTKNDTLSKR P FG+TMN+LYGE CG+G +D MN IIS
Sbjct: 536 MTPIKRAQPSAHDIFVGNWKPTKNDTLSKRGPTFGSTMNVLYGEYTCGQGSIDPMNNIIS 357
Query: 401 HYQYYLDLMGVGREHSGDN 345
HY Y+LDLMG+GRE +G N
Sbjct: 356 HYLYFLDLMGIGREDAGPN 300
Score = 29.0 bits (57), Expect(2) = 7e-039
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / -2
Query: 350 DNRDCAEQAPFNPSS 306
D CAEQ PFNPS+
Sbjct: 299 DELSCAEQKPFNPST 255
>gb|BP579684.1|BP579684 BP579684 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-23-L10 3',
mRNA sequence
Length = 499
Score = 83.5 bits (176), Expect(4) = 1e-036
Identities = 30/37 (81%), Positives = 35/37 (94%)
Frame = -2 / -1
Query: 638 PEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGN 528
P+Y+EQNATLAF AA+WRWMTPIK++QPSAHD FVGN
Sbjct: 499 PDYVEQNATLAFQAAIWRWMTPIKRAQPSAHDIFVGN 389
Score = 59.3 bits (123), Expect(4) = 1e-036
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = -2 / -1
Query: 455 GESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDNR 342
GE C +G +D MN IISHY Y+LDLMG+GRE G R
Sbjct: 316 GEYTCVQGSIDPMNNIISHYLYFLDLMGIGREERGTKR 203
Score = 39.6 bits (80), Expect(4) = 1e-036
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = -2 / -3
Query: 524 KPTKNDTLSKRLPGFGATMNIL 459
KPTKNDTLSK P F +TMN+L
Sbjct: 386 KPTKNDTLSKLGPTFASTMNLL 321
Score = 29.0 bits (57), Expect(4) = 1e-036
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / -2
Query: 350 DNRDCAEQAPFNPSS 306
D CAEQ PFNPS+
Sbjct: 204 DELSCAEQKPFNPST 160
>gb|AV786222.1|AV786222 AV786222 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-70-E24 3',
mRNA sequence
Length = 437
Score = 145 bits (311), Expect(2) = 3e-036
Identities = 56/77 (72%), Positives = 65/77 (84%)
Frame = -2 / -1
Query: 575 PIKKSQPSAHDAFVGNWKPTKNDTLSKRLPGFGATMNILYGESICGKGYVDAMNVIISHY 396
PIK++QPSAHD FVGNWKPTKNDTLSKR P FG+TMN+LYGE CG+ +D MN IISHY
Sbjct: 437 PIKRAQPSAHDIFVGNWKPTKNDTLSKRGPTFGSTMNVLYGEYTCGQVSIDPMNNIISHY 258
Query: 395 QYYLDLMGVGREHSGDN 345
Y+LDLMG+GRE +G N
Sbjct: 257 LYFLDLMGIGREDAGPN 207
Score = 29.0 bits (57), Expect(2) = 3e-036
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / -1
Query: 350 DNRDCAEQAPFNPSS 306
D CAEQ PFNPS+
Sbjct: 206 DELSCAEQKPFNPST 162
>dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complete sequence
Length = 23403063
Score = 152 bits (327), Expect = 9e-036
Identities = 57/81 (70%), Positives = 64/81 (79%)
Frame = -2 / -2
Query: 671 GGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSKR 492
G +K DLL PEYLE NATLAF AA+WRWMTP KK PSAHD FVG WKPTKNDT +KR
Sbjct: 5754320 GEALKVDLLSHPEYLENNATLAFQAAIWRWMTPPKKHLPSAHDVFVGKWKPTKNDTAAKR 5754141
Query: 491 LPGFGATMNILYGESICGKGY 429
PGFGAT+N+LYG+ IC G+
Sbjct: 5754140 TPGFGATINVLYGDQICNSGF 5754078
Score = 109 bits (232), Expect = 1e-022
Identities = 52/80 (65%), Positives = 54/80 (67%)
Frame = +1 / +1
Query: 433 PLPQIDSP*SMFMVAPNPGRRLLSVSFLVGFQLPTKASCADGWLFLIGVIHRHIAAMNAS 612
PL QI SP* FMVAPNPG R +VSF VGF PTK SCADG F GVIHR IAA NA+
Sbjct: 5754082 PLLQI*SP*RTFMVAPNPGVRFAAVSFFVGFHFPTKTSCADGKCFFGGVIHRQIAA*NAN 5754261
Query: 613 VAFCSRYSGXXSRSALIPPP 672
VA SRYSG SRS P
Sbjct: 5754262 VALFSRYSG*LSRSTFKASP 5754321
>ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complete sequence
Length = 23470805
Score = 152 bits (327), Expect = 9e-036
Identities = 57/81 (70%), Positives = 64/81 (79%)
Frame = -2 / -3
Query: 671 GGGIKADLLXXPEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSKR 492
G +K DLL PEYLE NATLAF AA+WRWMTP KK PSAHD FVG WKPTKNDT +KR
Sbjct: 5777076 GEALKVDLLSHPEYLENNATLAFQAAIWRWMTPPKKHLPSAHDVFVGKWKPTKNDTAAKR 5776897
Query: 491 LPGFGATMNILYGESICGKGY 429
PGFGAT+N+LYG+ IC G+
Sbjct: 5776896 TPGFGATINVLYGDQICNSGF 5776834
Score = 109 bits (232), Expect = 1e-022
Identities = 52/80 (65%), Positives = 54/80 (67%)
Frame = +1 / +2
Query: 433 PLPQIDSP*SMFMVAPNPGRRLLSVSFLVGFQLPTKASCADGWLFLIGVIHRHIAAMNAS 612
PL QI SP* FMVAPNPG R +VSF VGF PTK SCADG F GVIHR IAA NA+
Sbjct: 5776838 PLLQI*SP*RTFMVAPNPGVRFAAVSFFVGFHFPTKTSCADGKCFFGGVIHRQIAA*NAN 5777017
Query: 613 VAFCSRYSGXXSRSALIPPP 672
VA SRYSG SRS P
Sbjct: 5777018 VALFSRYSG*LSRSTFKASP 5777077
>gb|AV562314.1|AV562314 AV562314 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ168b01F 3', mRNA sequence
Length = 487
Score = 142 bits (304), Expect(2) = 2e-035
Identities = 54/74 (72%), Positives = 63/74 (85%)
Frame = -2 / -2
Query: 566 KSQPSAHDAFVGNWKPTKNDTLSKRLPGFGATMNILYGESICGKGYVDAMNVIISHYQYY 387
++QPSAHD FVGNWKPTKNDTLSKR P FG+TMN+LYGE CG+G +D MN IISHY Y+
Sbjct: 486 RAQPSAHDIFVGNWKPTKNDTLSKRGPTFGSTMNVLYGEYTCGQGSIDPMNNIISHYLYF 307
Query: 386 LDLMGVGREHSGDN 345
LDLMG+GRE +G N
Sbjct: 306 LDLMGIGREDAGPN 265
Score = 29.0 bits (57), Expect(2) = 2e-035
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / -2
Query: 350 DNRDCAEQAPFNPSS 306
D CAEQ PFNPS+
Sbjct: 264 DELSCAEQKPFNPST 220
>gb|AV561169.1|AV561169 AV561169 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ146h05F 3', mRNA sequence
Length = 394
Score = 142 bits (304), Expect(2) = 2e-035
Identities = 54/74 (72%), Positives = 63/74 (85%)
Frame = -2 / -2
Query: 566 KSQPSAHDAFVGNWKPTKNDTLSKRLPGFGATMNILYGESICGKGYVDAMNVIISHYQYY 387
++QPSAHD FVGNWKPTKNDTLSKR P FG+TMN+LYGE CG+G +D MN IISHY Y+
Sbjct: 393 RAQPSAHDIFVGNWKPTKNDTLSKRGPTFGSTMNVLYGEYTCGQGSIDPMNNIISHYLYF 214
Query: 386 LDLMGVGREHSGDN 345
LDLMG+GRE +G N
Sbjct: 213 LDLMGIGREDAGPN 172
Score = 29.0 bits (57), Expect(2) = 2e-035
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / -2
Query: 350 DNRDCAEQAPFNPSS 306
D CAEQ PFNPS+
Sbjct: 171 DELSCAEQKPFNPST 127
>emb|AL954570.1| Arabidopsis thaliana transposon insertion STS GT_3.655, sequence
tagged site
Length = 338
Score = 122 bits (262), Expect(3) = 3e-034
Identities = 46/59 (77%), Positives = 50/59 (84%)
Frame = -2 / +3
Query: 638 PEYLEQNATLAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSKRLPGFGATMNI 462
PEYLE NATLAF AA+WRWMTP KK PSAHD FVG WKPTKNDT +KR PGFGAT+N+
Sbjct: 3 PEYLENNATLAFQAAIWRWMTPPKKHLPSAHDVFVGKWKPTKNDTAAKRTPGFGATINV 179
Score = 94.1 bits (199), Expect(3) = 2e-021
Identities = 41/58 (70%), Positives = 43/58 (74%)
Frame = +1 / -2
Query: 466 FMVAPNPGRRLLSVSFLVGFQLPTKASCADGWLFLIGVIHRHIAAMNASVAFCSRYSG 639
FMVAPNPG R +VSF VGF PTK SCADG F GVIHR IAA NA+VA SRYSG
Sbjct: 175 FMVAPNPGVRFAAVSFFVGFHFPTKTSCADGKCFFGGVIHRQIAA*NANVALFSRYSG 2
Score = 43.7 bits (89), Expect(3) = 3e-034
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = -2 / +3
Query: 425 DAMNVIISHYQYYLDLMGVGREHSG 351
D MN I+SHY YLDL+GVGRE +G
Sbjct: 222 DEMNNIVSHYLDYLDLIGVGREEAG 296
Score = 29.0 bits (57), Expect(3) = 2e-021
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +1 / -2
Query: 352 PECSRPTPMRSR*YW*CEIITFMAS 426
P SRPTP+RSR* * E + F++S
Sbjct: 295 PASSRPTPIRSR*SK**ETMLFISS 221
Score = 18.0 bits (33), Expect(3) = 3e-034
Identities = 5/8 (62%), Positives = 7/8 (87%)
Frame = -2 / +3
Query: 338 CAEQAPFN 315
CA+Q PF+
Sbjct: 315 CADQEPFS 338
Score = 18.0 bits (33), Expect(3) = 2e-021
Identities = 5/7 (71%), Positives = 7/7 (100%)
Frame = +3 / -1
Query: 3 KRFLVCS 23
KRFL+C+
Sbjct: 335 KRFLICA 315
>gb|BP585980.1|BP585980 BP585980 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-04-J19 3',
mRNA sequence
Length = 451
Score = 86.8 bits (183), Expect(3) = 1e-033
Identities = 33/51 (64%), Positives = 40/51 (78%)
Frame = -2 / -3
Query: 497 KRLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVGREHSGDN 345
+R P FG TMN+LYGE CG+G +D MN IISHY Y+LDLMG+GRE +G N
Sbjct: 359 QRGPTFGTTMNVLYGEYTCGQGSIDPMNNIISHYLYFLDLMGIGREDAGPN 207
Score = 67.5 bits (141), Expect(3) = 1e-033
Identities = 25/28 (89%), Positives = 26/28 (92%)
Frame = -2 / -1
Query: 581 MTPIKKSQPSAHDAFVGNWKPTKNDTLS 498
MTPIK+ QPSAHD FVGNWKPTKNDTLS
Sbjct: 442 MTPIKRGQPSAHDIFVGNWKPTKNDTLS 359
Score = 29.0 bits (57), Expect(3) = 1e-033
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / -3
Query: 350 DNRDCAEQAPFNPSS 306
D CAEQ PFNPS+
Sbjct: 206 DELSCAEQKPFNPST 162
>gb|AV556920.1|AV556920 AV556920 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ056c12F 3', mRNA sequence
Length = 543
Score = 111 bits (236), Expect(2) = 2e-031
Identities = 41/61 (67%), Positives = 48/61 (78%)
Frame = -2 / -3
Query: 611 LAFMAAMWRWMTPIKKSQPSAHDAFVGNWKPTKNDTLSKRLPGFGATMNILYGESICGKG 432
LAF AA+WRW+TP KK PSA D FVG WKPTKND +KR PGFGAT+N+LYG+ IC G
Sbjct: 541 LAFQAAIWRWITPQKKHLPSALDVFVGKWKPTKNDIAAKRTPGFGATINVLYGDQICNIG 362
Query: 431 Y 429
+
Sbjct: 361 F 359
Score = 47.3 bits (97), Expect(2) = 2e-031
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = -2 / -3
Query: 425 DAMNVIISHYQYYLDLMGVGREHSG 351
D MN I+SHY YYLD++GVGRE +G
Sbjct: 352 DEMNDIVSHYLYYLDIIGVGREEAG 278
>gb|AV564773.1|AV564773 AV564773 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ210e07F 3', mRNA sequence
Length = 531
Score = 127 bits (273), Expect(2) = 4e-031
Identities = 49/67 (73%), Positives = 56/67 (83%)
Frame = -2 / -3
Query: 545 DAFVGNWKPTKNDTLSKRLPGFGATMNILYGESICGKGYVDAMNVIISHYQYYLDLMGVG 366
D FVGNWKPTKNDTLSKR P FG+TMN+LYGE CG+G +D MN IISHY Y+LDLMG+G
Sbjct: 529 DIFVGNWKPTKNDTLSKRGPTFGSTMNVLYGEYTCGQGSIDPMNNIISHYLYFLDLMGIG 350
Query: 365 REHSGDN 345
RE +G N
Sbjct: 349 REDAGPN 329
Score = 29.0 bits (57), Expect(2) = 4e-031
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / -3
Query: 350 DNRDCAEQAPFNPSS 306
D CAEQ PFNPS+
Sbjct: 328 DELSCAEQKPFNPST 284
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,239,687,283
Number of Sequences: 1013581
Number of extensions: 15061213
Number of successful extensions: 138381
Number of sequences better than 1.0e-020: 101
length of database: 302,980,290
effective HSP length: 55
effective length of database: 247,233,335
effective search space used: 42276900285
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)