TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3115208.2.3
(672 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AY056409.1| Arabidopsis thaliana AT3g13400/MRP15_3 mRNA,... 234 2e-060
gb|AY072225.1| Arabidopsis thaliana putative pollen specifi... 234 2e-060
gb|AY096473.1| Arabidopsis thaliana putative pollen-specifi... 234 2e-060
ref|NM_112185.2| Arabidopsis thaliana SKS13; copper ion bin... 234 2e-060
gb|BT005910.1| Arabidopsis thaliana At1g55560 gene, complet... 229 8e-059
dbj|AK118598.1| Arabidopsis thaliana At1g55560 mRNA for unk... 229 8e-059
emb|AJ249211.1|ATH249211 Arabidopsis thaliana mRNA for BNH ... 229 8e-059
ref|NM_104432.2| Arabidopsis thaliana SKS14; copper ion bin... 229 8e-059
gb|BT003958.1| Arabidopsis thaliana clone RAFL15-11-H21 (R2... 226 5e-058
gb|BT005058.1| Arabidopsis thaliana clone U20780 putative p... 226 5e-058
ref|NM_112184.2| Arabidopsis thaliana SKS11; copper ion bin... 226 5e-058
dbj|AP000603.1| Arabidopsis thaliana genomic DNA, chromosom... 172 2e-055
gb|AF367325.1| Arabidopsis thaliana At1g55570/T5A14_1 mRNA,... 217 3e-055
gb|AY133602.1| Arabidopsis thaliana At1g55570/T5A14_1 mRNA,... 217 3e-055
ref|NM_104433.2| Arabidopsis thaliana SKS12; copper ion bin... 217 3e-055
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 168 2e-054
gb|AC005223.1| Arabidopsis thaliana chromosome I BAC T5A14,... 168 2e-054
gb|AI995603.1|AI995603 701675059 A. thaliana, Columbia Col-... 210 4e-053
gb|AI999238.1|AI999238 701555127 A. thaliana, Columbia Col-... 169 1e-052
gb|CD533976.1|CD533976 34M4 Arabidopsis Leaf Senescence Lib... 195 9e-049
gb|CD530123.1|CD530123 39L4 Arabidopsis Leaf Senescence Lib... 193 5e-048
ref|NM_102033.1| Arabidopsis thaliana SKS8; copper ion bind... 193 5e-048
ref|NM_102034.1| Arabidopsis thaliana SKS7; copper ion bind... 193 6e-048
gb|BX836294.1|BX836294 BX836294 Arabidopsis thaliana Hormon... 188 2e-046
gb|CK118224.1|CK118224 217n04.p1 AtM1 Arabidopsis thaliana ... 188 2e-046
gb|AY057492.1| Arabidopsis thaliana At1g76160/T23E18_10 mRN... 188 2e-046
ref|NM_106265.2| Arabidopsis thaliana SKS5; copper ion bind... 188 2e-046
gb|AV537619.1|AV537619 AV537619 Arabidopsis thaliana roots ... 186 7e-046
gb|CK118777.1|CK118777 216b24.p1 AtM1 Arabidopsis thaliana ... 186 7e-046
gb|AY136404.1| Arabidopsis thaliana pectinesterase, putativ... 185 1e-045
gb|BT000227.1| Arabidopsis thaliana pectinesterase, putativ... 185 1e-045
gb|AV537452.1|AV537452 AV537452 Arabidopsis thaliana roots ... 181 2e-044
gb|AY094401.1| Arabidopsis thaliana AT5g66920/MUD21_18 mRNA... 181 2e-044
gb|BT000862.1| Arabidopsis thaliana At5g66920/MUD21_18 mRNA... 181 2e-044
emb|BX831134.1|CNS09ZEQ Arabidopsis thaliana Full-length cD... 181 2e-044
ref|NM_126091.2| Arabidopsis thaliana SKS17; copper ion bin... 181 2e-044
gb|AY081335.1| Arabidopsis thaliana pectinesterase-like pro... 181 2e-044
emb|AX507059.1| Sequence 1754 from Patent WO0216655 181 2e-044
gb|AY084759.1| Arabidopsis thaliana clone 116979 mRNA, comp... 181 2e-044
gb|BT008899.1| Arabidopsis thaliana At4g22010 mRNA, complet... 181 2e-044
ref|NM_118322.3| Arabidopsis thaliana SKS4; copper ion bind... 181 2e-044
gb|AV544145.1|AV544145 AV544145 Arabidopsis thaliana roots ... 179 6e-044
gb|AV549603.1|AV549603 AV549603 Arabidopsis thaliana roots ... 177 4e-043
gb|AV558425.1|AV558425 AV558425 Arabidopsis thaliana green ... 174 2e-042
gb|CB261040.1|CB261040 39-E9570-012-004-M09-T7R MPIZ-ADIS-0... 174 3e-042
gb|CD530290.1|CD530290 05J01 Arabidopsis Leaf Senescence Li... 174 3e-042
gb|AV546963.1|AV546963 AV546963 Arabidopsis thaliana roots ... 174 3e-042
gb|CK117520.1|CK117520 218e09.p1 AtM1 Arabidopsis thaliana ... 174 3e-042
gb|AY059814.1| Arabidopsis thaliana Unknown protein mRNA, c... 174 3e-042
gb|AY128725.1| Arabidopsis thaliana unknown protein (At1g41... 174 3e-042
gb|AY072215.1| Arabidopsis thaliana putative pectinesterase... 174 3e-042
gb|AY096593.1| Arabidopsis thaliana putative pectinesterase... 174 3e-042
emb|AX507015.1| Sequence 1710 from Patent WO0216655 174 3e-042
emb|CQ805442.1| Sequence 1853 from Patent WO2004035798 174 3e-042
ref|NM_103408.1| Arabidopsis thaliana SKS6; pectinesterase ... 174 3e-042
ref|NM_120004.3| Arabidopsis thaliana SKS9; copper ion bind... 174 3e-042
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 172 1e-041
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 172 1e-041
gb|CB254770.1|CB254770 60-E012994-019-004-H15-SP6r MPIZ-ADI... 171 2e-041
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 168 1e-040
gb|BP640292.1|BP640292 BP640292 RAFL19 Arabidopsis thaliana... 78 1e-040
gb|AI994271.1|AI994271 701502007 A. thaliana, Ohio State cl... 168 2e-040
gb|AV546304.1|AV546304 AV546304 Arabidopsis thaliana roots ... 168 2e-040
gb|AV547447.1|AV547447 AV547447 Arabidopsis thaliana roots ... 168 2e-040
emb|BX817191.1|CNS0AE02 Arabidopsis thaliana Full-length cD... 168 2e-040
ref|NM_118949.1| Arabidopsis thaliana SKS10; copper ion bin... 168 2e-040
ref|NM_119879.2| Arabidopsis thaliana SKS15; copper ion bin... 168 2e-040
gb|AV539026.1|AV539026 AV539026 Arabidopsis thaliana roots ... 167 3e-040
gb|AV540166.1|AV540166 AV540166 Arabidopsis thaliana roots ... 164 3e-039
gb|BP643869.1|BP643869 BP643869 RAFL19 Arabidopsis thaliana... 164 3e-039
emb|BX829416.1|CNS0A1XP Arabidopsis thaliana Full-length cD... 163 4e-039
gb|BP594696.1|BP594696 BP594696 RAFL15 Arabidopsis thaliana... 129 7e-039
gb|AC009978.3|AC009978 Genomic sequence for Arabidopsis tha... 105 2e-038
gb|AI998955.1|AI998955 701547724 A. thaliana, Columbia Col-... 161 2e-038
gb|BP659146.1|BP659146 BP659146 RAFL19 Arabidopsis thaliana... 160 4e-038
gb|AV548867.1|AV548867 AV548867 Arabidopsis thaliana roots ... 159 7e-038
gb|AC013482.2|AC013482 Genomic sequence for Arabidopsis tha... 112 5e-037
gb|BP653921.1|BP653921 BP653921 RAFL19 Arabidopsis thaliana... 104 6e-037
gb|AA042225.1|AA042225 24546 CD4-13 Arabidopsis thaliana cD... 156 7e-037
emb|AL022140.1|ATF1N20 Arabidopsis thaliana DNA chromosome ... 131 7e-037
emb|AL161556.2|ATCHRIV56 Arabidopsis thaliana DNA chromosom... 131 1e-036
gb|BP646385.1|BP646385 BP646385 RAFL19 Arabidopsis thaliana... 97 2e-036
gb|AV552616.1|AV552616 AV552616 Arabidopsis thaliana roots ... 154 2e-036
dbj|AB010700.1| Arabidopsis thaliana genomic DNA, chromosom... 101 3e-036
gb|BP640164.1|BP640164 BP640164 RAFL19 Arabidopsis thaliana... 151 2e-035
gb|AY074379.1| Arabidopsis thaliana putative Pollen-specifi... 151 2e-035
gb|AY091230.1| Arabidopsis thaliana putative pollen-specifi... 151 2e-035
emb|AX507345.1| Sequence 2040 from Patent WO0216655 151 2e-035
ref|NM_118656.3| Arabidopsis thaliana SKS1 (SKU5 SIMILAR 1)... 151 2e-035
gb|CB074550.1|CB074550 EST01327 Avirulent Peronospora paras... 151 2e-035
gb|AV532213.1|AV532213 AV532213 Arabidopsis thaliana flower... 151 2e-035
gb|AC008046.4|AC008046 Arabidopsis thaliana chromosome I BA... 97 4e-035
gb|AC022456.5|AC022456 Arabidopsis thaliana chromosome 1 BA... 97 4e-035
dbj|AB062093.1| Arabidopsis thaliana DNA, chromosome 1 cent... 97 4e-035
emb|AX059475.1| Sequence 208 from Patent WO0055325 97 4e-035
emb|AX059467.1| Sequence 200 from Patent WO0055325 97 4e-035
gb|AC007727.2|F8K7 Arabidopsis thaliana chromosome 1 BAC F8... 112 4e-035
gb|BP639377.1|BP639377 BP639377 RAFL19 Arabidopsis thaliana... 149 6e-035
emb|BX820822.1|CNS0A83H Arabidopsis thaliana Full-length cD... 149 6e-035
ref|NM_127927.2| Arabidopsis thaliana SKS16; copper ion bin... 149 6e-035
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 131 9e-035
gb|AF439406.1| Arabidopsis thaliana multi-copper oxidase-re... 149 1e-034
emb|AX506931.1| Sequence 1626 from Patent WO0216655 149 1e-034
ref|NM_117312.2| Arabidopsis thaliana SKU5; copper ion bind... 149 1e-034
gb|BP648595.1|BP648595 BP648595 RAFL19 Arabidopsis thaliana... 148 2e-034
gb|AI996542.1|AI996542 701667381 A. thaliana, Columbia Col-... 147 3e-034
gb|AV815329.1|AV815329 AV815329 RAFL9 Arabidopsis thaliana ... 146 7e-034
emb|AL161593.2|ATCHRIV89 Arabidopsis thaliana DNA chromosom... 101 9e-034
gb|AC069558.5|AC069558 Genomic Sequence For Arabidopsis tha... 101 9e-034
emb|AL035539.1|ATF22I13 Arabidopsis thaliana DNA chromosome... 101 9e-034
gb|BP642092.1|BP642092 BP642092 RAFL19 Arabidopsis thaliana... 112 1e-033
gb|BP639469.1|BP639469 BP639469 RAFL19 Arabidopsis thaliana... 144 3e-033
gb|BP637078.1|BP637078 BP637078 RAFL19 Arabidopsis thaliana... 135 4e-033
gb|AY088897.1| Arabidopsis thaliana clone 99023 mRNA, compl... 134 5e-033
ref|NM_106229.1| Arabidopsis thaliana SKS18; copper ion bin... 134 5e-033
emb|BX814551.1|CNS0ADPL Arabidopsis thaliana Full-length cD... 134 5e-033
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 112 1e-032
gb|W43071.1|W43071 22662 Lambda-PRL2 Arabidopsis thaliana c... 141 2e-032
gb|BP655818.1|BP655818 BP655818 RAFL19 Arabidopsis thaliana... 141 2e-032
gb|BP657564.1|BP657564 BP657564 RAFL19 Arabidopsis thaliana... 140 3e-032
emb|BX830464.1|CNS0A1MM Arabidopsis thaliana Full-length cD... 140 3e-032
gb|BP640624.1|BP640624 BP640624 RAFL19 Arabidopsis thaliana... 109 5e-032
gb|BP653520.1|BP653520 BP653520 RAFL19 Arabidopsis thaliana... 99 6e-032
gb|AU230778.1|AU230778 AU230778 RAFL19 Arabidopsis thaliana... 137 6e-032
emb|Z99707.1|ATAP21 Arabidopsis thaliana DNA chromosome 4, ... 82 7e-032
emb|AL161590.2|ATCHRIV86 Arabidopsis thaliana DNA chromosom... 82 7e-032
emb|AL161572.2|ATCHRIV68 Arabidopsis thaliana DNA chromosom... 97 2e-031
emb|AL035524.1|ATT13J8 Arabidopsis thaliana DNA chromosome ... 97 2e-031
gb|BT004129.1| Arabidopsis thaliana clone RAFL15-06-D22 (R2... 138 2e-031
gb|BT004990.1| Arabidopsis thaliana clone U20700 unknown pr... 138 2e-031
ref|NM_124527.3| Arabidopsis thaliana copper ion binding AT... 138 2e-031
gb|AI992516.1|AI992516 701558085 A. thaliana, Ohio State cl... 111 3e-031
gb|AV541870.1|AV541870 AV541870 Arabidopsis thaliana roots ... 136 8e-031
gb|BP647934.1|BP647934 BP647934 RAFL19 Arabidopsis thaliana... 101 1e-030
gb|AQ967962.1|AQ967962 LERIW71TR LERG Arabidopsis thaliana ... 91 1e-030
ref|NM_124220.1| Arabidopsis thaliana SKS3; copper ion bind... 133 7e-030
gb|BP650173.1|BP650173 BP650173 RAFL19 Arabidopsis thaliana... 110 8e-030
gb|BP790305.1|BP790305 BP790305 RAFL7 Arabidopsis thaliana ... 132 1e-029
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 131 2e-029
gb|AV802568.1|AV802568 AV802568 RAFL9 Arabidopsis thaliana ... 77 7e-029
gb|BP650649.1|BP650649 BP650649 RAFL19 Arabidopsis thaliana... 61 1e-028
gb|BP654705.1|BP654705 BP654705 RAFL19 Arabidopsis thaliana... 102 2e-028
gb|AI994449.1|AI994449 701498347 A. thaliana, Ohio State cl... 127 3e-028
gb|BP638345.1|BP638345 BP638345 RAFL19 Arabidopsis thaliana... 125 2e-027
gb|BP790694.1|BP790694 BP790694 RAFL7 Arabidopsis thaliana ... 124 3e-027
gb|AV813039.1|AV813039 AV813039 RAFL9 Arabidopsis thaliana ... 90 4e-027
gb|BP649850.1|BP649850 BP649850 RAFL19 Arabidopsis thaliana... 70 6e-027
gb|B30214.1|B30214 T30D18TRC TAMU Arabidopsis thaliana geno... 83 7e-027
gb|AV544367.1|AV544367 AV544367 Arabidopsis thaliana roots ... 122 8e-027
gb|AC006434.5|AC006434 Genomic sequence for Arabidopsis tha... 60 9e-027
gb|AC007396.6|AC007396 Genomic sequence for Arabidopsis tha... 60 9e-027
gb|AV793898.1|AV793898 AV793898 RAFL8 Arabidopsis thaliana ... 122 1e-026
gb|AV541839.1|AV541839 AV541839 Arabidopsis thaliana roots ... 122 1e-026
gb|BP598501.1|BP598501 BP598501 RAFL16 Arabidopsis thaliana... 122 1e-026
gb|BP643391.1|BP643391 BP643391 RAFL19 Arabidopsis thaliana... 60 1e-026
emb|AL161563.2|ATCHRIV63 Arabidopsis thaliana DNA chromosom... 75 1e-026
emb|AL035396.1|ATF24A6 Arabidopsis thaliana DNA chromosome ... 75 1e-026
gb|BP642279.1|BP642279 BP642279 RAFL19 Arabidopsis thaliana... 109 3e-026
gb|BP586841.1|BP586841 BP586841 RAFL15 Arabidopsis thaliana... 120 4e-026
emb|AL161534.2|ATCHRIV34 Arabidopsis thaliana DNA chromosom... 75 6e-026
emb|AL049730.2|ATT1P17 Arabidopsis thaliana DNA chromosome ... 75 6e-026
emb|AL080318.1|ATT4C9 Arabidopsis thaliana DNA chromosome 4... 75 6e-026
gb|T21473.1|T21473 3481 Lambda-PRL2 Arabidopsis thaliana cD... 116 9e-026
gb|B28124.1|B28124 T30H8TRB TAMU Arabidopsis thaliana genom... 83 1e-025
gb|BP619415.1|BP619415 BP619415 RAFL16 Arabidopsis thaliana... 118 1e-025
gb|BP638635.1|BP638635 BP638635 RAFL19 Arabidopsis thaliana... 73 2e-025
gb|AV439987.1|AV439987 AV439987 Arabidopsis thaliana above-... 116 7e-025
gb|BP641591.1|BP641591 BP641591 RAFL19 Arabidopsis thaliana... 60 1e-024
gb|AV558633.1|AV558633 AV558633 Arabidopsis thaliana green ... 115 2e-024
gb|AV557988.1|AV557988 AV557988 Arabidopsis thaliana green ... 114 2e-024
gb|BP604333.1|BP604333 BP604333 RAFL16 Arabidopsis thaliana... 114 2e-024
gb|AQ249742.1|AQ249742 T30H8-Sp6.1 TAMU Arabidopsis thalian... 73 5e-024
dbj|AB018109.1| Arabidopsis thaliana genomic DNA, chromosom... 74 8e-024
gb|AQ964230.1|AQ964230 LERGU67TF LERG Arabidopsis thaliana ... 60 3e-023
gb|AQ964231.1|AQ964231 LERGU67TR LERG Arabidopsis thaliana ... 60 3e-023
gb|CB263805.1|CB263805 08-E8879-008-014-O02-pBl2 MPIZ-ADIS-... 110 6e-023
emb|AL082756.1|CNS00O4M Arabidopsis thaliana genome survey ... 97 8e-023
gb|B11798.1|B11798 T30C23-Sp6 TAMU Arabidopsis thaliana gen... 58 1e-022
dbj|AB020745.1| Arabidopsis thaliana genomic DNA, chromosom... 63 2e-022
gb|AV807347.1|AV807347 AV807347 RAFL9 Arabidopsis thaliana ... 107 3e-022
gb|AV794098.1|AV794098 AV794098 RAFL8 Arabidopsis thaliana ... 107 4e-022
gb|AV791536.1|AV791536 AV791536 RAFL7 Arabidopsis thaliana ... 82 4e-022
gb|BP605456.1|BP605456 BP605456 RAFL16 Arabidopsis thaliana... 106 5e-022
gb|BP640216.1|BP640216 BP640216 RAFL19 Arabidopsis thaliana... 106 5e-022
gb|BP789378.1|BP789378 BP789378 RAFL7 Arabidopsis thaliana ... 104 3e-021
gb|BP783865.1|BP783865 BP783865 RAFL7 Arabidopsis thaliana ... 104 4e-021
>gb|AY056409.1| Arabidopsis thaliana AT3g13400/MRP15_3 mRNA, complete cds
Length = 1879
Score = 234 bits (505), Expect = 2e-060
Identities = 91/145 (62%), Positives = 110/145 (75%)
Frame = +2 / +3
Query: 5 PPAVNGPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRK 184
P A L V PNV+ FRTF+E+VFEN EKS+ S H+DGY+FF V PG+W+PE R
Sbjct: 1332 PAAKITTLTVEPNVLNITFRTFVEVVFENHEKSMQSFHLDGYSFFAVASEPGRWTPEKRN 1511
Query: 185 TYNLLDTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSL 364
YNLLD VSRHT+QVYP+SW+AI+LTFDNAGMW++ S WER YLG+Q Y+SV+SP +SL
Sbjct: 1512 NYNLLDAVSRHTVQVYPKSWSAILLTFDNAGMWNIRSENWERRYLGQQLYVSVLSPEKSL 1691
Query: 365 RDEYNMPDNALRCGKVVGLPLPPSY 439
RDEYN+P N CG V GLPLP Y
Sbjct: 1692 RDEYNIPLNTNLCGIVKGLPLPTPY 1766
Score = 152 bits (326), Expect = 1e-035
Identities = 73/137 (53%), Positives = 86/137 (62%)
Frame = -1 / -1
Query: 411 TLPQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDRG 232
T+PQR LSGMLYSS SD +G+ TL NC P+ SQ + H+PALSNV +A D G
Sbjct: 1738 TMPQRLVLSGMLYSSLSDFSGDRTLTYNCWPKYLLSQFSDLMFHIPALSNVKRMADQDLG 1559
Query: 231 YTWIVCRLTVSSRLYVFLTSGDHFPGPIPTPKKA*PSTWRESMLFSGFSKTISMKVRNSA 52
YT VC LT SS+L +FL SG H PG T KK *PS W++ MLFS FSKT S KVR
Sbjct: 1558 YTCTVCLLTASSKL*LFLFSGVHLPGSEATAKKE*PSKWKDCMLFSWFSKTTSTKVRKVM 1379
Query: 51 VMTLGMTWRGPFTAGGT 1
+ TLG T A G+
Sbjct: 1378 LRTLGSTVSVVILAAGS 1328
>gb|AY072225.1| Arabidopsis thaliana putative pollen specific protein (At3g13400)
mRNA, complete cds
Length = 1895
Score = 234 bits (505), Expect = 2e-060
Identities = 91/145 (62%), Positives = 110/145 (75%)
Frame = +2 / +3
Query: 5 PPAVNGPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRK 184
P A L V PNV+ FRTF+E+VFEN EKS+ S H+DGY+FF V PG+W+PE R
Sbjct: 1332 PAAKITTLTVEPNVLNITFRTFVEVVFENHEKSMQSFHLDGYSFFAVASEPGRWTPEKRN 1511
Query: 185 TYNLLDTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSL 364
YNLLD VSRHT+QVYP+SW+AI+LTFDNAGMW++ S WER YLG+Q Y+SV+SP +SL
Sbjct: 1512 NYNLLDAVSRHTVQVYPKSWSAILLTFDNAGMWNIRSENWERRYLGQQLYVSVLSPEKSL 1691
Query: 365 RDEYNMPDNALRCGKVVGLPLPPSY 439
RDEYN+P N CG V GLPLP Y
Sbjct: 1692 RDEYNIPLNTNLCGIVKGLPLPTPY 1766
Score = 152 bits (326), Expect = 1e-035
Identities = 73/137 (53%), Positives = 86/137 (62%)
Frame = -1 / -2
Query: 411 TLPQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDRG 232
T+PQR LSGMLYSS SD +G+ TL NC P+ SQ + H+PALSNV +A D G
Sbjct: 1738 TMPQRLVLSGMLYSSLSDFSGDRTLTYNCWPKYLLSQFSDLMFHIPALSNVKRMADQDLG 1559
Query: 231 YTWIVCRLTVSSRLYVFLTSGDHFPGPIPTPKKA*PSTWRESMLFSGFSKTISMKVRNSA 52
YT VC LT SS+L +FL SG H PG T KK *PS W++ MLFS FSKT S KVR
Sbjct: 1558 YTCTVCLLTASSKL*LFLFSGVHLPGSEATAKKE*PSKWKDCMLFSWFSKTTSTKVRKVM 1379
Query: 51 VMTLGMTWRGPFTAGGT 1
+ TLG T A G+
Sbjct: 1378 LRTLGSTVSVVILAAGS 1328
>gb|AY096473.1| Arabidopsis thaliana putative pollen-specific protein (At3g13400)
mRNA, complete cds
Length = 1687
Score = 234 bits (505), Expect = 2e-060
Identities = 91/145 (62%), Positives = 110/145 (75%)
Frame = +2 / +1
Query: 5 PPAVNGPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRK 184
P A L V PNV+ FRTF+E+VFEN EKS+ S H+DGY+FF V PG+W+PE R
Sbjct: 1213 PAAKITTLTVEPNVLNITFRTFVEVVFENHEKSMQSFHLDGYSFFAVASEPGRWTPEKRN 1392
Query: 185 TYNLLDTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSL 364
YNLLD VSRHT+QVYP+SW+AI+LTFDNAGMW++ S WER YLG+Q Y+SV+SP +SL
Sbjct: 1393 NYNLLDAVSRHTVQVYPKSWSAILLTFDNAGMWNIRSENWERRYLGQQLYVSVLSPEKSL 1572
Query: 365 RDEYNMPDNALRCGKVVGLPLPPSY 439
RDEYN+P N CG V GLPLP Y
Sbjct: 1573 RDEYNIPLNTNLCGIVKGLPLPTPY 1647
Score = 152 bits (326), Expect = 1e-035
Identities = 73/137 (53%), Positives = 86/137 (62%)
Frame = -1 / -3
Query: 411 TLPQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDRG 232
T+PQR LSGMLYSS SD +G+ TL NC P+ SQ + H+PALSNV +A D G
Sbjct: 1619 TMPQRLVLSGMLYSSLSDFSGDRTLTYNCWPKYLLSQFSDLMFHIPALSNVKRMADQDLG 1440
Query: 231 YTWIVCRLTVSSRLYVFLTSGDHFPGPIPTPKKA*PSTWRESMLFSGFSKTISMKVRNSA 52
YT VC LT SS+L +FL SG H PG T KK *PS W++ MLFS FSKT S KVR
Sbjct: 1439 YTCTVCLLTASSKL*LFLFSGVHLPGSEATAKKE*PSKWKDCMLFSWFSKTTSTKVRKVM 1260
Query: 51 VMTLGMTWRGPFTAGGT 1
+ TLG T A G+
Sbjct: 1259 LRTLGSTVSVVILAAGS 1209
>ref|NM_112185.2| Arabidopsis thaliana SKS13; copper ion binding AT3G13400 (SKS13)
mRNA, complete cds
Length = 1898
Score = 234 bits (505), Expect = 2e-060
Identities = 91/145 (62%), Positives = 110/145 (75%)
Frame = +2 / +3
Query: 5 PPAVNGPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRK 184
P A L V PNV+ FRTF+E+VFEN EKS+ S H+DGY+FF V PG+W+PE R
Sbjct: 1332 PAAKITTLTVEPNVLNITFRTFVEVVFENHEKSMQSFHLDGYSFFAVASEPGRWTPEKRN 1511
Query: 185 TYNLLDTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSL 364
YNLLD VSRHT+QVYP+SW+AI+LTFDNAGMW++ S WER YLG+Q Y+SV+SP +SL
Sbjct: 1512 NYNLLDAVSRHTVQVYPKSWSAILLTFDNAGMWNIRSENWERRYLGQQLYVSVLSPEKSL 1691
Query: 365 RDEYNMPDNALRCGKVVGLPLPPSY 439
RDEYN+P N CG V GLPLP Y
Sbjct: 1692 RDEYNIPLNTNLCGIVKGLPLPTPY 1766
Score = 152 bits (326), Expect = 1e-035
Identities = 73/137 (53%), Positives = 86/137 (62%)
Frame = -1 / -2
Query: 411 TLPQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDRG 232
T+PQR LSGMLYSS SD +G+ TL NC P+ SQ + H+PALSNV +A D G
Sbjct: 1738 TMPQRLVLSGMLYSSLSDFSGDRTLTYNCWPKYLLSQFSDLMFHIPALSNVKRMADQDLG 1559
Query: 231 YTWIVCRLTVSSRLYVFLTSGDHFPGPIPTPKKA*PSTWRESMLFSGFSKTISMKVRNSA 52
YT VC LT SS+L +FL SG H PG T KK *PS W++ MLFS FSKT S KVR
Sbjct: 1558 YTCTVCLLTASSKL*LFLFSGVHLPGSEATAKKE*PSKWKDCMLFSWFSKTTSTKVRKVM 1379
Query: 51 VMTLGMTWRGPFTAGGT 1
+ TLG T A G+
Sbjct: 1378 LRTLGSTVSVVILAAGS 1328
>gb|BT005910.1| Arabidopsis thaliana At1g55560 gene, complete cds
Length = 1650
Score = 229 bits (494), Expect = 8e-059
Identities = 90/146 (61%), Positives = 111/146 (76%)
Frame = +2 / +1
Query: 5 PPAVNGPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRK 184
P A L V PNV+ FRTF+EI+FEN EK++ S H+DGY+FF V PG+W+PE R+
Sbjct: 1210 PAAKITALTVQPNVLNITFRTFVEIIFENHEKTMQSFHLDGYSFFAVASEPGRWTPEKRE 1389
Query: 185 TYNLLDTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSL 364
YNLLD VSRHT+QVYP+SW+AI+LTFDNAGMW++ S ER YLGEQ Y+SV+SP +SL
Sbjct: 1390 NYNLLDAVSRHTVQVYPKSWSAILLTFDNAGMWNIRSENLERKYLGEQLYVSVLSPEKSL 1569
Query: 365 RDEYNMPDNALRCGKVVGLPLPPSYA 442
RDEYN+P N CG V GLPLP Y+
Sbjct: 1570 RDEYNIPLNTNLCGIVKGLPLPAHYS 1647
Score = 138 bits (295), Expect = 2e-031
Identities = 70/137 (51%), Positives = 82/137 (59%)
Frame = -1 / -2
Query: 411 TLPQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDRG 232
T+PQR L GMLYSS SD +G+ TL NCSPR + S+ + H+PALSNV IA D G
Sbjct: 1616 TMPQRFVLRGMLYSSLSDFSGDRTLTYNCSPRYFLSKFSDLMFHIPALSNVKRIADQDLG 1437
Query: 231 YTWIVCRLTVSSRLYVFLTSGDHFPGPIPTPKKA*PSTWRESMLFSGFSKTISMKVRNSA 52
T VC LT SS+L L SG H PG T KK *PS + M+FS FSK IS KVR
Sbjct: 1436 *TCTVCLLTASSKL*FSLFSGVHLPGSEATAKKE*PSK*NDCMVFSWFSKMISTKVRKVM 1257
Query: 51 VMTLGMTWRGPFTAGGT 1
+ TLG T A G+
Sbjct: 1256 LRTLGCTVNAVILAAGS 1206
>dbj|AK118598.1| Arabidopsis thaliana At1g55560 mRNA for unknown protein, complete
cds, clone: RAFL19-84-I12
Length = 1881
Score = 229 bits (494), Expect = 8e-059
Identities = 90/146 (61%), Positives = 111/146 (76%)
Frame = +2 / +2
Query: 5 PPAVNGPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRK 184
P A L V PNV+ FRTF+EI+FEN EK++ S H+DGY+FF V PG+W+PE R+
Sbjct: 1319 PAAKITALTVQPNVLNITFRTFVEIIFENHEKTMQSFHLDGYSFFAVASEPGRWTPEKRE 1498
Query: 185 TYNLLDTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSL 364
YNLLD VSRHT+QVYP+SW+AI+LTFDNAGMW++ S ER YLGEQ Y+SV+SP +SL
Sbjct: 1499 NYNLLDAVSRHTVQVYPKSWSAILLTFDNAGMWNIRSENLERKYLGEQLYVSVLSPEKSL 1678
Query: 365 RDEYNMPDNALRCGKVVGLPLPPSYA 442
RDEYN+P N CG V GLPLP Y+
Sbjct: 1679 RDEYNIPLNTNLCGIVKGLPLPAHYS 1756
Score = 138 bits (295), Expect = 2e-031
Identities = 70/137 (51%), Positives = 82/137 (59%)
Frame = -1 / -1
Query: 411 TLPQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDRG 232
T+PQR L GMLYSS SD +G+ TL NCSPR + S+ + H+PALSNV IA D G
Sbjct: 1725 TMPQRFVLRGMLYSSLSDFSGDRTLTYNCSPRYFLSKFSDLMFHIPALSNVKRIADQDLG 1546
Query: 231 YTWIVCRLTVSSRLYVFLTSGDHFPGPIPTPKKA*PSTWRESMLFSGFSKTISMKVRNSA 52
T VC LT SS+L L SG H PG T KK *PS + M+FS FSK IS KVR
Sbjct: 1545 *TCTVCLLTASSKL*FSLFSGVHLPGSEATAKKE*PSK*NDCMVFSWFSKMISTKVRKVM 1366
Query: 51 VMTLGMTWRGPFTAGGT 1
+ TLG T A G+
Sbjct: 1365 LRTLGCTVNAVILAAGS 1315
>emb|AJ249211.1|ATH249211 Arabidopsis thaliana mRNA for BNH protein (T5A14.2 gene)
Length = 1954
Score = 229 bits (494), Expect = 8e-059
Identities = 90/146 (61%), Positives = 111/146 (76%)
Frame = +2 / +1
Query: 5 PPAVNGPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRK 184
P A L V PNV+ FRTF+EI+FEN EK++ S H+DGY+FF V PG+W+PE R+
Sbjct: 1345 PAAKITALTVQPNVLNITFRTFVEIIFENHEKTMQSFHLDGYSFFAVASEPGRWTPEKRE 1524
Query: 185 TYNLLDTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSL 364
YNLLD VSRHT+QVYP+SW+AI+LTFDNAGMW++ S ER YLGEQ Y+SV+SP +SL
Sbjct: 1525 NYNLLDAVSRHTVQVYPKSWSAILLTFDNAGMWNIRSENLERKYLGEQLYVSVLSPEKSL 1704
Query: 365 RDEYNMPDNALRCGKVVGLPLPPSYA 442
RDEYN+P N CG V GLPLP Y+
Sbjct: 1705 RDEYNIPLNTNLCGIVKGLPLPAHYS 1782
Score = 144 bits (310), Expect = 2e-033
Identities = 71/137 (51%), Positives = 83/137 (60%)
Frame = -1 / -3
Query: 411 TLPQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDRG 232
T+PQR L GMLYSS SD +G+ TL NCSPR + S+ + H+PALSNV IA D G
Sbjct: 1751 TMPQRFVLRGMLYSSLSDFSGDRTLTYNCSPRYFLSKFSDLMFHIPALSNVKRIADQDLG 1572
Query: 231 YTWIVCRLTVSSRLYVFLTSGDHFPGPIPTPKKA*PSTWRESMLFSGFSKTISMKVRNSA 52
T VC LT SS+L L SG H PG T KK *PS W + M+FS FSK IS KVR
Sbjct: 1571 *TCTVCLLTASSKL*FSLFSGVHLPGSEATAKKE*PSKWNDCMVFSWFSKMISTKVRKVM 1392
Query: 51 VMTLGMTWRGPFTAGGT 1
+ TLG T A G+
Sbjct: 1391 LRTLGCTVNAVILAAGS 1341
>ref|NM_104432.2| Arabidopsis thaliana SKS14; copper ion binding AT1G55560 (SKS14)
mRNA, complete cds
Length = 1928
Score = 229 bits (494), Expect = 8e-059
Identities = 90/146 (61%), Positives = 111/146 (76%)
Frame = +2 / +2
Query: 5 PPAVNGPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRK 184
P A L V PNV+ FRTF+EI+FEN EK++ S H+DGY+FF V PG+W+PE R+
Sbjct: 1337 PAAKITALTVQPNVLNITFRTFVEIIFENHEKTMQSFHLDGYSFFAVASEPGRWTPEKRE 1516
Query: 185 TYNLLDTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSL 364
YNLLD VSRHT+QVYP+SW+AI+LTFDNAGMW++ S ER YLGEQ Y+SV+SP +SL
Sbjct: 1517 NYNLLDAVSRHTVQVYPKSWSAILLTFDNAGMWNIRSENLERKYLGEQLYVSVLSPEKSL 1696
Query: 365 RDEYNMPDNALRCGKVVGLPLPPSYA 442
RDEYN+P N CG V GLPLP Y+
Sbjct: 1697 RDEYNIPLNTNLCGIVKGLPLPAHYS 1774
Score = 138 bits (295), Expect = 2e-031
Identities = 70/137 (51%), Positives = 82/137 (59%)
Frame = -1 / -3
Query: 411 TLPQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDRG 232
T+PQR L GMLYSS SD +G+ TL NCSPR + S+ + H+PALSNV IA D G
Sbjct: 1743 TMPQRFVLRGMLYSSLSDFSGDRTLTYNCSPRYFLSKFSDLMFHIPALSNVKRIADQDLG 1564
Query: 231 YTWIVCRLTVSSRLYVFLTSGDHFPGPIPTPKKA*PSTWRESMLFSGFSKTISMKVRNSA 52
T VC LT SS+L L SG H PG T KK *PS + M+FS FSK IS KVR
Sbjct: 1563 *TCTVCLLTASSKL*FSLFSGVHLPGSEATAKKE*PSK*NDCMVFSWFSKMISTKVRKVM 1384
Query: 51 VMTLGMTWRGPFTAGGT 1
+ TLG T A G+
Sbjct: 1383 LRTLGCTVNAVILAAGS 1333
>gb|BT003958.1| Arabidopsis thaliana clone RAFL15-11-H21 (R20780) putative
pectinesterase (pectin methylesterase) family protein
(At3g13390) mRNA, complete cds
Length = 2083
Score = 226 bits (488), Expect = 5e-058
Identities = 87/141 (61%), Positives = 107/141 (75%)
Frame = +2 / +2
Query: 26 LHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDT 205
+ ++PNV+ RTFIE+VFEN EKS+ S H+DGY+FF V + PG W+PE RK YNLLD
Sbjct: 1286 IKIVPNVLNITHRTFIEVVFENHEKSVQSWHLDGYSFFAVAVEPGTWTPEKRKNYNLLDA 1465
Query: 206 VSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMP 385
VSRHT+QVYP+ W AI+LTFDN GMW+V S ER YLG+Q Y SV+SP +SLRDEYNMP
Sbjct: 1466 VSRHTVQVYPKCWAAILLTFDNCGMWNVRSENSERRYLGQQLYASVLSPEKSLRDEYNMP 1645
Query: 386 DNALRCGKVVGLPLPPSYAPA 448
+ +L+CG V G P P YA A
Sbjct: 1646 ETSLQCGLVKGTPKPNPYAGA 1708
Score = 129 bits (276), Expect = 9e-029
Identities = 66/125 (52%), Positives = 76/125 (60%)
Frame = -1 / -2
Query: 411 TLPQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDRG 232
T P R +SGMLYSS SD +G+ TL *+C P+* S+ + T H+P LSNVS IA G
Sbjct: 1671 TRPHWRLVSGMLYSSLSDFSGDKTLA*SCCPK*RLSEFSDRTFHIPQLSNVSKIAAQHFG 1492
Query: 231 YTWIVCRLTVSSRLYVFLTSGDHFPGPIPTPKKA*PSTWRESMLFSGFSKTISMKVRNSA 52
TW VC LT SSRL FL SG PG T KK *PS + LFS FS T SMKVR
Sbjct: 1491 *TWTVCLLTASSRL*FFLFSGVQVPGSTATAKKE*PSKCHD*TLFSWFSNTTSMKVR*VM 1312
Query: 51 VMTLG 37
+ T G
Sbjct: 1311 LRTFG 1297
>gb|BT005058.1| Arabidopsis thaliana clone U20780 putative pectinesterase (pectin
methylesterase) family protein (At3g13390) mRNA, complete
cds
Length = 1696
Score = 226 bits (488), Expect = 5e-058
Identities = 87/141 (61%), Positives = 107/141 (75%)
Frame = +2 / +1
Query: 26 LHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDT 205
+ ++PNV+ RTFIE+VFEN EKS+ S H+DGY+FF V + PG W+PE RK YNLLD
Sbjct: 1240 IKIVPNVLNITHRTFIEVVFENHEKSVQSWHLDGYSFFAVAVEPGTWTPEKRKNYNLLDA 1419
Query: 206 VSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMP 385
VSRHT+QVYP+ W AI+LTFDN GMW+V S ER YLG+Q Y SV+SP +SLRDEYNMP
Sbjct: 1420 VSRHTVQVYPKCWAAILLTFDNCGMWNVRSENSERRYLGQQLYASVLSPEKSLRDEYNMP 1599
Query: 386 DNALRCGKVVGLPLPPSYAPA 448
+ +L+CG V G P P YA A
Sbjct: 1600 ETSLQCGLVKGTPKPNPYAGA 1662
Score = 129 bits (276), Expect = 9e-029
Identities = 66/125 (52%), Positives = 76/125 (60%)
Frame = -1 / -3
Query: 411 TLPQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDRG 232
T P R +SGMLYSS SD +G+ TL *+C P+* S+ + T H+P LSNVS IA G
Sbjct: 1625 TRPHWRLVSGMLYSSLSDFSGDKTLA*SCCPK*RLSEFSDRTFHIPQLSNVSKIAAQHFG 1446
Query: 231 YTWIVCRLTVSSRLYVFLTSGDHFPGPIPTPKKA*PSTWRESMLFSGFSKTISMKVRNSA 52
TW VC LT SSRL FL SG PG T KK *PS + LFS FS T SMKVR
Sbjct: 1445 *TWTVCLLTASSRL*FFLFSGVQVPGSTATAKKE*PSKCHD*TLFSWFSNTTSMKVR*VM 1266
Query: 51 VMTLG 37
+ T G
Sbjct: 1265 LRTFG 1251
>ref|NM_112184.2| Arabidopsis thaliana SKS11; copper ion binding AT3G13390 (SKS11)
mRNA, complete cds
Length = 2067
Score = 226 bits (488), Expect = 5e-058
Identities = 87/141 (61%), Positives = 107/141 (75%)
Frame = +2 / +2
Query: 26 LHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDT 205
+ ++PNV+ RTFIE+VFEN EKS+ S H+DGY+FF V + PG W+PE RK YNLLD
Sbjct: 1286 IKIVPNVLNITHRTFIEVVFENHEKSVQSWHLDGYSFFAVAVEPGTWTPEKRKNYNLLDA 1465
Query: 206 VSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMP 385
VSRHT+QVYP+ W AI+LTFDN GMW+V S ER YLG+Q Y SV+SP +SLRDEYNMP
Sbjct: 1466 VSRHTVQVYPKCWAAILLTFDNCGMWNVRSENSERRYLGQQLYASVLSPEKSLRDEYNMP 1645
Query: 386 DNALRCGKVVGLPLPPSYAPA 448
+ +L+CG V G P P YA A
Sbjct: 1646 ETSLQCGLVKGTPKPNPYAGA 1708
Score = 129 bits (276), Expect = 9e-029
Identities = 66/125 (52%), Positives = 76/125 (60%)
Frame = -1 / -1
Query: 411 TLPQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDRG 232
T P R +SGMLYSS SD +G+ TL *+C P+* S+ + T H+P LSNVS IA G
Sbjct: 1671 TRPHWRLVSGMLYSSLSDFSGDKTLA*SCCPK*RLSEFSDRTFHIPQLSNVSKIAAQHFG 1492
Query: 231 YTWIVCRLTVSSRLYVFLTSGDHFPGPIPTPKKA*PSTWRESMLFSGFSKTISMKVRNSA 52
TW VC LT SSRL FL SG PG T KK *PS + LFS FS T SMKVR
Sbjct: 1491 *TWTVCLLTASSRL*FFLFSGVQVPGSTATAKKE*PSKCHD*TLFSWFSNTTSMKVR*VM 1312
Query: 51 VMTLG 37
+ T G
Sbjct: 1311 LRTFG 1297
>dbj|AP000603.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MRP15
Length = 83287
Score = 172 bits (370), Expect(2) = 2e-055
Identities = 64/95 (67%), Positives = 77/95 (81%)
Frame = +2 / +1
Query: 155 PGKWSPEVRKTYNLLDTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFY 334
PG+W+PE R YNLLD VSRHT+QVYP+SW+AI+LTFDNAGMW++ S WER YLG+Q Y
Sbjct: 10942 PGRWTPEKRNNYNLLDAVSRHTVQVYPKSWSAILLTFDNAGMWNIRSENWERRYLGQQLY 11121
Query: 335 ISVVSPARSLRDEYNMPDNALRCGKVVGLPLPPSY 439
+SV+SP +SLRDEYN+P N CG V GLPLP Y
Sbjct: 11122 VSVLSPEKSLRDEYNIPLNTNLCGIVKGLPLPTPY 11226
Score = 165 bits (355), Expect(2) = 3e-050
Identities = 64/98 (65%), Positives = 75/98 (76%)
Frame = +2 / -3
Query: 155 PGKWSPEVRKTYNLLDTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFY 334
PG W+PE RK YNLLD VSRHT+QVYP+ W AI+LTFDN GMW+V S ER YLG+Q Y
Sbjct: 5627 PGTWTPEKRKNYNLLDAVSRHTVQVYPKCWAAILLTFDNCGMWNVRSENSERRYLGQQLY 5448
Query: 335 ISVVSPARSLRDEYNMPDNALRCGKVVGLPLPPSYAPA 448
SV+SP +SLRDEYNMP+ +L+CG V G P P YA A
Sbjct: 5447 ASVLSPEKSLRDEYNMPETSLQCGLVKGTPKPNPYAGA 5334
Score = 105 bits (223), Expect(2) = 3e-031
Identities = 48/86 (55%), Positives = 57/86 (66%)
Frame = -1 / -3
Query: 411 TLPQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDRG 232
T+PQR LSGMLYSS SD +G+ TL NC P+ SQ + H+PALSNV +A D G
Sbjct: 11198 TMPQRLVLSGMLYSSLSDFSGDRTLTYNCWPKYLLSQFSDLMFHIPALSNVKRMADQDLG 11019
Query: 231 YTWIVCRLTVSSRLYVFLTSGDHFPG 154
YT VC LT SS+L +FL SG H PG
Sbjct: 11018 YTCTVCLLTASSKL*LFLFSGVHLPG 10941
Score = 97.7 bits (207), Expect(2) = 1e-021
Identities = 47/86 (54%), Positives = 55/86 (63%)
Frame = -1 / +1
Query: 411 TLPQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDRG 232
T P R +SGMLYSS SD +G+ TL *+C P+* S+ + T H+P LSNVS IA G
Sbjct: 5371 TRPHWRLVSGMLYSSLSDFSGDKTLA*SCCPK*RLSEFSDRTFHIPQLSNVSKIAAQHFG 5550
Query: 231 YTWIVCRLTVSSRLYVFLTSGDHFPG 154
TW VC LT SSRL FL SG PG
Sbjct: 5551 *TWTVCLLTASSRL*FFLFSGVQVPG 5628
Score = 66.1 bits (138), Expect(2) = 2e-055
Identities = 27/47 (57%), Positives = 33/47 (70%)
Frame = +2 / +1
Query: 5 PPAVNGPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGV 145
P A L V PNV+ FRTF+E+VFEN EKS+ S H+DGY+FF V
Sbjct: 10681 PAAKITTLTVEPNVLNITFRTFVEVVFENHEKSMQSFHLDGYSFFAV 10821
Score = 64.3 bits (134), Expect(2) = 3e-050
Identities = 23/40 (57%), Positives = 31/40 (77%)
Frame = +2 / -2
Query: 26 LHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGV 145
+ ++PNV+ RTFIE+VFEN EKS+ S H+DGY+FF V
Sbjct: 5892 IKIVPNVLNITHRTFIEVVFENHEKSVQSWHLDGYSFFAV 5773
Score = 52.4 bits (108), Expect(2) = 3e-031
Identities = 25/48 (52%), Positives = 29/48 (60%)
Frame = -1 / -3
Query: 144 TPKKA*PSTWRESMLFSGFSKTISMKVRNSAVMTLGMTWRGPFTAGGT 1
T KK *PS W++ MLFS FSKT S KVR + TLG T A G+
Sbjct: 10820 TAKKE*PSKWKDCMLFSWFSKTTSTKVRKVMLRTLGSTVSVVILAAGS 10677
Score = 35.9 bits (72), Expect(2) = 1e-021
Identities = 19/36 (52%), Positives = 21/36 (58%)
Frame = -1 / +2
Query: 144 TPKKA*PSTWRESMLFSGFSKTISMKVRNSAVMTLG 37
T KK *PS + LFS FS T SMKVR + T G
Sbjct: 5774 TAKKE*PSKCHD*TLFSWFSNTTSMKVR*VMLRTFG 5881
>gb|AF367325.1| Arabidopsis thaliana At1g55570/T5A14_1 mRNA, complete cds
Length = 2088
Score = 217 bits (468), Expect = 3e-055
Identities = 84/141 (59%), Positives = 105/141 (74%)
Frame = +2 / +2
Query: 26 LHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDT 205
+ + PNV+ RTFIE+VFEN E+S+ S H+DGY+FF V + PG W+PE RK YNLLD
Sbjct: 1358 IKIEPNVLNITHRTFIEVVFENHERSVQSWHLDGYSFFAVAVEPGTWTPEKRKNYNLLDA 1537
Query: 206 VSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMP 385
VSRHT+QVYP+ W AI+LTFDN GMW++ S ER YLG+Q Y SV+SP +SLRDEYNMP
Sbjct: 1538 VSRHTVQVYPKCWAAILLTFDNCGMWNIRSENAERRYLGQQLYASVLSPEKSLRDEYNMP 1717
Query: 386 DNALRCGKVVGLPLPPSYAPA 448
+ +L+CG V G P YA A
Sbjct: 1718 ETSLQCGLVKGKPKVNPYAGA 1780
Score = 129 bits (276), Expect = 9e-029
Identities = 65/125 (52%), Positives = 75/125 (60%)
Frame = -1 / -1
Query: 411 TLPQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDRG 232
T P R +SGMLYSSR D +G+ TL +C P+* S + H+P LSNVS IA G
Sbjct: 1743 TRPH*RLVSGMLYSSRRDFSGDKTLAYSCCPK*RLSAFSDLMFHIPQLSNVSKIAAQHLG 1564
Query: 231 YTWIVCRLTVSSRLYVFLTSGDHFPGPIPTPKKA*PSTWRESMLFSGFSKTISMKVRNSA 52
TW VCRLT S RL FL SG H PG T KK *PS ++ L S FS T SMKVR
Sbjct: 1563 *TWTVCRLTASRRL*FFLFSGVHVPGSTATAKKE*PSKCQDWTLLSWFSNTTSMKVR*VM 1384
Query: 51 VMTLG 37
+ TLG
Sbjct: 1383 LRTLG 1369
>gb|AY133602.1| Arabidopsis thaliana At1g55570/T5A14_1 mRNA, complete cds
Length = 1668
Score = 217 bits (468), Expect = 3e-055
Identities = 84/141 (59%), Positives = 105/141 (74%)
Frame = +2 / +1
Query: 26 LHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDT 205
+ + PNV+ RTFIE+VFEN E+S+ S H+DGY+FF V + PG W+PE RK YNLLD
Sbjct: 1243 IKIEPNVLNITHRTFIEVVFENHERSVQSWHLDGYSFFAVAVEPGTWTPEKRKNYNLLDA 1422
Query: 206 VSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMP 385
VSRHT+QVYP+ W AI+LTFDN GMW++ S ER YLG+Q Y SV+SP +SLRDEYNMP
Sbjct: 1423 VSRHTVQVYPKCWAAILLTFDNCGMWNIRSENAERRYLGQQLYASVLSPEKSLRDEYNMP 1602
Query: 386 DNALRCGKVVGLPLPPSYAPA 448
+ +L+CG V G P YA A
Sbjct: 1603 ETSLQCGLVKGKPKVNPYAGA 1665
Score = 129 bits (276), Expect = 9e-029
Identities = 65/125 (52%), Positives = 75/125 (60%)
Frame = -1 / -2
Query: 411 TLPQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDRG 232
T P R +SGMLYSSR D +G+ TL +C P+* S + H+P LSNVS IA G
Sbjct: 1628 TRPH*RLVSGMLYSSRRDFSGDKTLAYSCCPK*RLSAFSDLMFHIPQLSNVSKIAAQHLG 1449
Query: 231 YTWIVCRLTVSSRLYVFLTSGDHFPGPIPTPKKA*PSTWRESMLFSGFSKTISMKVRNSA 52
TW VCRLT S RL FL SG H PG T KK *PS ++ L S FS T SMKVR
Sbjct: 1448 *TWTVCRLTASRRL*FFLFSGVHVPGSTATAKKE*PSKCQDWTLLSWFSNTTSMKVR*VM 1269
Query: 51 VMTLG 37
+ TLG
Sbjct: 1268 LRTLG 1254
>ref|NM_104433.2| Arabidopsis thaliana SKS12; copper ion binding AT1G55570 (SKS12)
mRNA, complete cds
Length = 2083
Score = 217 bits (468), Expect = 3e-055
Identities = 84/141 (59%), Positives = 105/141 (74%)
Frame = +2 / +3
Query: 26 LHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDT 205
+ + PNV+ RTFIE+VFEN E+S+ S H+DGY+FF V + PG W+PE RK YNLLD
Sbjct: 1353 IKIEPNVLNITHRTFIEVVFENHERSVQSWHLDGYSFFAVAVEPGTWTPEKRKNYNLLDA 1532
Query: 206 VSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMP 385
VSRHT+QVYP+ W AI+LTFDN GMW++ S ER YLG+Q Y SV+SP +SLRDEYNMP
Sbjct: 1533 VSRHTVQVYPKCWAAILLTFDNCGMWNIRSENAERRYLGQQLYASVLSPEKSLRDEYNMP 1712
Query: 386 DNALRCGKVVGLPLPPSYAPA 448
+ +L+CG V G P YA A
Sbjct: 1713 ETSLQCGLVKGKPKVNPYAGA 1775
Score = 129 bits (276), Expect = 9e-029
Identities = 65/125 (52%), Positives = 75/125 (60%)
Frame = -1 / -1
Query: 411 TLPQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDRG 232
T P R +SGMLYSSR D +G+ TL +C P+* S + H+P LSNVS IA G
Sbjct: 1738 TRPH*RLVSGMLYSSRRDFSGDKTLAYSCCPK*RLSAFSDLMFHIPQLSNVSKIAAQHLG 1559
Query: 231 YTWIVCRLTVSSRLYVFLTSGDHFPGPIPTPKKA*PSTWRESMLFSGFSKTISMKVRNSA 52
TW VCRLT S RL FL SG H PG T KK *PS ++ L S FS T SMKVR
Sbjct: 1558 *TWTVCRLTASRRL*FFLFSGVHVPGSTATAKKE*PSKCQDWTLLSWFSNTTSMKVR*VM 1379
Query: 51 VMTLG 37
+ TLG
Sbjct: 1378 LRTLG 1364
>gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom arm complete sequence
Length = 14668883
Score = 168 bits (362), Expect(2) = 2e-054
Identities = 64/96 (66%), Positives = 78/96 (81%)
Frame = +2 / -3
Query: 155 PGKWSPEVRKTYNLLDTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFY 334
PG+W+PE R+ YNLLD VSRHT+QVYP+SW+AI+LTFDNAGMW++ S ER YLGEQ Y
Sbjct: 5114196 PGRWTPEKRENYNLLDAVSRHTVQVYPKSWSAILLTFDNAGMWNIRSENLERKYLGEQLY 5114017
Query: 335 ISVVSPARSLRDEYNMPDNALRCGKVVGLPLPPSYA 442
+SV+SP +SLRDEYN+P N CG V GLPLP Y+
Sbjct: 5114016 VSVLSPEKSLRDEYNIPLNTNLCGIVKGLPLPAHYS 5113909
Score = 160 bits (344), Expect(2) = 4e-050
Identities = 62/98 (63%), Positives = 74/98 (75%)
Frame = +2 / +1
Query: 155 PGKWSPEVRKTYNLLDTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFY 334
PG W+PE RK YNLLD VSRHT+QVYP+ W AI+LTFDN GMW++ S ER YLG+Q Y
Sbjct: 5118907 PGTWTPEKRKNYNLLDAVSRHTVQVYPKCWAAILLTFDNCGMWNIRSENAERRYLGQQLY 5119086
Query: 335 ISVVSPARSLRDEYNMPDNALRCGKVVGLPLPPSYAPA 448
SV+SP +SLRDEYNMP+ +L+CG V G P YA A
Sbjct: 5119087 ASVLSPEKSLRDEYNMPETSLQCGLVKGKPKVNPYAGA 5119200
Score = 105 bits (225), Expect(3) = 2e-038
Identities = 39/71 (54%), Positives = 49/71 (69%)
Frame = +2 / -2
Query: 221 IQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMPDNALR 400
IQVYP SWTAI++ DN GMW++ S W R YLG+Q Y+ V +P+ SLRDEY +P NAL
Sbjct: 12819643 IQVYPSSWTAILIALDNVGMWNLRSEFWARQYLGQQLYLRVYTPSTSLRDEYPIPKNALL 12819464
Query: 401 CGKVVGLPLPP 433
CG+ G P
Sbjct: 12819463 CGRASGRSTRP 12819431
Score = 98.7 bits (209), Expect(2) = 2e-027
Identities = 47/86 (54%), Positives = 55/86 (63%)
Frame = -1 / +2
Query: 411 TLPQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDRG 232
T+PQR L GMLYSS SD +G+ TL NCSPR + S+ + H+PALSNV IA D G
Sbjct: 5113940 TMPQRFVLRGMLYSSLSDFSGDRTLTYNCSPRYFLSKFSDLMFHIPALSNVKRIADQDLG 5114119
Query: 231 YTWIVCRLTVSSRLYVFLTSGDHFPG 154
T VC LT SS+L L SG H PG
Sbjct: 5114120 *TCTVCLLTASSKL*FSLFSGVHLPG 5114197
Score = 97.7 bits (207), Expect(2) = 3e-024
Identities = 46/86 (53%), Positives = 53/86 (61%)
Frame = -1 / -1
Query: 411 TLPQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDRG 232
T P R +SGMLYSSR D +G+ TL +C P+* S + H+P LSNVS IA G
Sbjct: 5119163 TRPH*RLVSGMLYSSRRDFSGDKTLAYSCCPK*RLSAFSDLMFHIPQLSNVSKIAAQHLG 5118984
Query: 231 YTWIVCRLTVSSRLYVFLTSGDHFPG 154
TW VCRLT S RL FL SG H PG
Sbjct: 5118983 *TWTVCRLTASRRL*FFLFSGVHVPG 5118906
Score = 97.3 bits (206), Expect(3) = 4e-035
Identities = 35/66 (53%), Positives = 46/66 (69%)
Frame = +2 / -3
Query: 221 IQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMPDNALR 400
IQVYP+SWTAI + DN GMW++ S W R YLG+Q Y+ V + + SLRDEY +P N+
Sbjct: 90441 IQVYPKSWTAIYIALDNVGMWNLRSEFWARQYLGQQLYLRVFTSSTSLRDEYPIPKNSRL 90262
Query: 401 CGKVVG 418
CG+ G
Sbjct: 90261 CGRARG 90244
Score = 66.1 bits (138), Expect(2) = 2e-054
Identities = 27/51 (52%), Positives = 34/51 (66%)
Frame = +2 / -3
Query: 5 PPAVNGPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGP 157
P A L V PNV+ FRTF+EI+FEN EK++ S H+DGY+FF V P
Sbjct: 5114433 PAAKITALTVQPNVLNITFRTFVEIIFENHEKTMQSFHLDGYSFFAVA*AP 5114281
Score = 60.2 bits (125), Expect(2) = 4e-050
Identities = 22/40 (55%), Positives = 30/40 (75%)
Frame = +2 / +3
Query: 26 LHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGV 145
+ + PNV+ RTFIE+VFEN E+S+ S H+DGY+FF V
Sbjct: 5118690 IKIEPNVLNITHRTFIEVVFENHERSVQSWHLDGYSFFAV 5118809
Score = 59.7 bits (124), Expect(4) = 8e-027
Identities = 21/39 (53%), Positives = 29/39 (74%)
Frame = +2 / -2
Query: 227 VYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISV 343
VYP SWTAI++ DN GMW+V S E++YLG++ Y+ V
Sbjct: 12696508 VYPYSWTAILIAMDNQGMWNVRSQKAEQWYLGQELYMRV 12696392
Score = 54.7 bits (113), Expect(3) = 4e-035
Identities = 21/43 (48%), Positives = 32/43 (74%)
Frame = +2 / -2
Query: 20 GPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVG 148
G L++ +V+ ++RTFIEIVFEN E + S H++GY+F+ VG
Sbjct: 90826 GGLYLDTSVLQVDYRTFIEIVFENQEDIVQSYHLNGYSFWVVG 90698
Score = 54.2 bits (112), Expect(3) = 2e-038
Identities = 19/43 (44%), Positives = 32/43 (74%)
Frame = +2 / -2
Query: 20 GPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVG 148
G +++ +V+ ++RTF+EI+FEN E + S H+DGY+F+ VG
Sbjct: 12820021 GGIYLDTSVMQVDYRTFVEIIFENSEDIVQSWHLDGYSFWVVG 12819893
Score = 47.3 bits (97), Expect(4) = 8e-027
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = +2 / -3
Query: 41 NVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVG 148
+V+ ++ FI IVF+NP ++S H+DGY FF VG
Sbjct: 12696855 SVVDIHYKDFIHIVFQNPLFGLESYHIDGYNFFVVG 12696748
Score = 46.0 bits (94), Expect(2) = 2e-027
Identities = 24/52 (46%), Positives = 28/52 (53%)
Frame = -1 / +2
Query: 156 GPIPTPKKA*PSTWRESMLFSGFSKTISMKVRNSAVMTLGMTWRGPFTAGGT 1
G T KK *PS + M+FS FSK IS KVR + TLG T A G+
Sbjct: 5114282 GAYATAKKE*PSK*NDCMVFSWFSKMISTKVRKVMLRTLGCTVNAVILAAGS 5114437
Score = 40.9 bits (83), Expect(4) = 8e-027
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = +2 / -1
Query: 137 FGVGMGPGKWSPEVRKTYNLLDTVSRHTIQVYP 235
F V G G WS + YNL+D VSR T+QV P
Sbjct: 12696677 FNVRYGFGAWSESKKAGYNLVDAVSRSTVQVKP 12696579
Score = 39.6 bits (80), Expect(3) = 2e-038
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +2 / -2
Query: 149 MGPGKWSPEVRKTYNLLDTVSRHTIQV 229
M G+WSP+ R YNL D V+R T+QV
Sbjct: 12819805 MDGGQWSPDSRNEYNLRDAVARCTVQV 12819725
Score = 36.3 bits (73), Expect(3) = 4e-035
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +2 / -3
Query: 149 MGPGKWSPEVRKTYNLLDTVSRHTIQVYP 235
M G+W R YNL D VSR T+QV P
Sbjct: 90606 MDGGQWKTGSRNGYNLRDAVSRSTVQVSP 90520
Score = 35.9 bits (72), Expect(2) = 3e-024
Identities = 19/36 (52%), Positives = 22/36 (61%)
Frame = -1 / -2
Query: 144 TPKKA*PSTWRESMLFSGFSKTISMKVRNSAVMTLG 37
T KK *PS ++ L S FS T SMKVR + TLG
Sbjct: 5118808 TAKKE*PSKCQDWTLLSWFSNTTSMKVR*VMLRTLG 5118701
Score = 29.0 bits (57), Expect(4) = 8e-027
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2 / -2
Query: 362 LRDEYNMPDNALRCGKV 412
+RDE +P N +RCGKV
Sbjct: 12696355 VRDENPIPGNVIRCGKV 12696305
>gb|AC005223.1| Arabidopsis thaliana chromosome I BAC T5A14, complete sequence
Length = 87967
Score = 168 bits (362), Expect(2) = 2e-054
Identities = 64/96 (66%), Positives = 78/96 (81%)
Frame = +2 / +2
Query: 155 PGKWSPEVRKTYNLLDTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFY 334
PG+W+PE R+ YNLLD VSRHT+QVYP+SW+AI+LTFDNAGMW++ S ER YLGEQ Y
Sbjct: 16172 PGRWTPEKRENYNLLDAVSRHTVQVYPKSWSAILLTFDNAGMWNIRSENLERKYLGEQLY 16351
Query: 335 ISVVSPARSLRDEYNMPDNALRCGKVVGLPLPPSYA 442
+SV+SP +SLRDEYN+P N CG V GLPLP Y+
Sbjct: 16352 VSVLSPEKSLRDEYNIPLNTNLCGIVKGLPLPAHYS 16459
Score = 160 bits (344), Expect(2) = 4e-050
Identities = 62/98 (63%), Positives = 74/98 (75%)
Frame = +2 / -1
Query: 155 PGKWSPEVRKTYNLLDTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFY 334
PG W+PE RK YNLLD VSRHT+QVYP+ W AI+LTFDN GMW++ S ER YLG+Q Y
Sbjct: 11461 PGTWTPEKRKNYNLLDAVSRHTVQVYPKCWAAILLTFDNCGMWNIRSENAERRYLGQQLY 11282
Query: 335 ISVVSPARSLRDEYNMPDNALRCGKVVGLPLPPSYAPA 448
SV+SP +SLRDEYNMP+ +L+CG V G P YA A
Sbjct: 11281 ASVLSPEKSLRDEYNMPETSLQCGLVKGKPKVNPYAGA 11168
Score = 98.7 bits (209), Expect(2) = 2e-027
Identities = 47/86 (54%), Positives = 55/86 (63%)
Frame = -1 / -2
Query: 411 TLPQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDRG 232
T+PQR L GMLYSS SD +G+ TL NCSPR + S+ + H+PALSNV IA D G
Sbjct: 16428 TMPQRFVLRGMLYSSLSDFSGDRTLTYNCSPRYFLSKFSDLMFHIPALSNVKRIADQDLG 16249
Query: 231 YTWIVCRLTVSSRLYVFLTSGDHFPG 154
T VC LT SS+L L SG H PG
Sbjct: 16248 *TCTVCLLTASSKL*FSLFSGVHLPG 16171
Score = 97.7 bits (207), Expect(2) = 3e-024
Identities = 46/86 (53%), Positives = 53/86 (61%)
Frame = -1 / +3
Query: 411 TLPQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDRG 232
T P R +SGMLYSSR D +G+ TL +C P+* S + H+P LSNVS IA G
Sbjct: 11205 TRPH*RLVSGMLYSSRRDFSGDKTLAYSCCPK*RLSAFSDLMFHIPQLSNVSKIAAQHLG 11384
Query: 231 YTWIVCRLTVSSRLYVFLTSGDHFPG 154
TW VCRLT S RL FL SG H PG
Sbjct: 11385 *TWTVCRLTASRRL*FFLFSGVHVPG 11462
Score = 66.1 bits (138), Expect(2) = 2e-054
Identities = 27/51 (52%), Positives = 34/51 (66%)
Frame = +2 / +2
Query: 5 PPAVNGPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGP 157
P A L V PNV+ FRTF+EI+FEN EK++ S H+DGY+FF V P
Sbjct: 15935 PAAKITALTVQPNVLNITFRTFVEIIFENHEKTMQSFHLDGYSFFAVA*AP 16087
Score = 60.2 bits (125), Expect(2) = 4e-050
Identities = 22/40 (55%), Positives = 30/40 (75%)
Frame = +2 / -3
Query: 26 LHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGV 145
+ + PNV+ RTFIE+VFEN E+S+ S H+DGY+FF V
Sbjct: 11678 IKIEPNVLNITHRTFIEVVFENHERSVQSWHLDGYSFFAV 11559
Score = 46.0 bits (94), Expect(2) = 2e-027
Identities = 24/52 (46%), Positives = 28/52 (53%)
Frame = -1 / -2
Query: 156 GPIPTPKKA*PSTWRESMLFSGFSKTISMKVRNSAVMTLGMTWRGPFTAGGT 1
G T KK *PS + M+FS FSK IS KVR + TLG T A G+
Sbjct: 16086 GAYATAKKE*PSK*NDCMVFSWFSKMISTKVRKVMLRTLGCTVNAVILAAGS 15931
Score = 35.9 bits (72), Expect(2) = 3e-024
Identities = 19/36 (52%), Positives = 22/36 (61%)
Frame = -1 / +1
Query: 144 TPKKA*PSTWRESMLFSGFSKTISMKVRNSAVMTLG 37
T KK *PS ++ L S FS T SMKVR + TLG
Sbjct: 11560 TAKKE*PSKCQDWTLLSWFSNTTSMKVR*VMLRTLG 11667
>gb|AI995603.1|AI995603 701675059 A. thaliana, Columbia Col-0, inflorescence-1 Arabidopsis
thaliana cDNA clone 701675059, mRNA sequence
Length = 562
Score = 210 bits (453), Expect = 4e-053
Identities = 80/127 (62%), Positives = 98/127 (77%)
Frame = +2 / -2
Query: 59 FRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDTVSRHTIQVYPR 238
FRTF+E+VFEN EKS+ S H+DGY+F V PG+W+PE R YNLLD VSRHT+QVYP+
Sbjct: 492 FRTFVEVVFENHEKSMQSFHLDGYSFSPVASEPGRWTPEKRNNYNLLDAVSRHTVQVYPK 313
Query: 239 SWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMPDNALRCGKVVG 418
SW+AI+LTFDNAGMW++ S WER YLG+Q Y+SV+ +SLRDEYN+P N CG V G
Sbjct: 312 SWSAILLTFDNAGMWNIRSENWERRYLGQQLYVSVLYXEKSLRDEYNIPLNTNLCGIVKG 133
Query: 419 LPLPPSY 439
PLP Y
Sbjct: 132 XPLPTPY 112
Score = 137 bits (294), Expect = 3e-031
Identities = 66/126 (52%), Positives = 79/126 (62%)
Frame = -1 / +2
Query: 411 TLPQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDRG 232
T+PQR LSGMLYSS SD + TL NC P+ SQ + H+PALSNV +A D G
Sbjct: 140 TMPQRLVLSGMLYSSLSDFSXYRTLTYNCWPKYLLSQFSDLMFHIPALSNVKRMADQDLG 319
Query: 231 YTWIVCRLTVSSRLYVFLTSGDHFPGPIPTPKKA*PSTWRESMLFSGFSKTISMKVRNSA 52
YT VC LT SS+L +FL SG H PG T +K *PS W++ MLFS FSKT S KVR
Sbjct: 320 YTCTVCLLTASSKL*LFLFSGVHLPGSEATGEKE*PSKWKDCMLFSWFSKTTSTKVRKVI 499
Query: 51 VMTLGM 34
+G+
Sbjct: 500 NEDIGL 517
>gb|AI999238.1|AI999238 701555127 A. thaliana, Columbia Col-0, rosette-3 Arabidopsis
thaliana cDNA clone 701555127, mRNA sequence
Length = 607
Score = 169 bits (363), Expect(2) = 1e-052
Identities = 65/100 (65%), Positives = 79/100 (79%)
Frame = +2 / -3
Query: 143 VGMGPGKWSPEVRKTYNLLDTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLG 322
V PG+W+PE R+ YNLLD VSRHT+QVYP+SW+AI+LTFDNAGMW++ S ER YLG
Sbjct: 410 VASEPGRWTPEKRENYNLLDAVSRHTVQVYPKSWSAILLTFDNAGMWNIRSENLERKYLG 231
Query: 323 EQFYISVVSPARSLRDEYNMPDNALRCGKVVGLPLPPSYA 442
EQ Y+SV+SP +SLRDEYN+P N CG V GLPLP Y+
Sbjct: 230 EQLYVSVLSPEKSLRDEYNIPLNTNLCGIVKGLPLPAHYS 111
Score = 100 bits (212), Expect(2) = 2e-025
Identities = 48/94 (51%), Positives = 59/94 (62%)
Frame = -1 / +1
Query: 411 TLPQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDRG 232
T+PQR L GMLYSS SD +G+ TL NCSPR + S+ + H+PALSNV IA D G
Sbjct: 142 TMPQRFVLRGMLYSSLSDFSGDRTLTYNCSPRYFLSKFSDLMFHIPALSNVKRIADQDLG 321
Query: 231 YTWIVCRLTVSSRLYVFLTSGDHFPGPIPTPKKA 130
T VC LT SS+L L SG H PG T +++
Sbjct: 322 *TCTVCLLTASSKL*FSLFSGVHLPGSEATGRRS 423
Score = 60.2 bits (125), Expect(2) = 1e-052
Identities = 23/45 (51%), Positives = 32/45 (71%)
Frame = +2 / -1
Query: 5 PPAVNGPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFF 139
P A L V PNV+ FRTF+EI+FEN +K++ S H+DGY+F+
Sbjct: 547 PAAXITALTVQPNVLNITFRTFVEIIFENHKKTMQSFHLDGYSFY 413
Score = 38.2 bits (77), Expect(2) = 2e-025
Identities = 20/45 (44%), Positives = 24/45 (53%)
Frame = -1 / +3
Query: 135 KA*PSTWRESMLFSGFSKTISMKVRNSAVMTLGMTWRGPFTAGGT 1
K *PS + M+F FSK IS KVR + TLG T A G+
Sbjct: 417 KE*PSK*NDCMVFLWFSKMISTKVRKVMLRTLGCTVNAVIXAAGS 551
>gb|CD533976.1|CD533976 34M4 Arabidopsis Leaf Senescence Library Arabidopsis thaliana cDNA
3', mRNA sequence
Length = 483
Score = 195 bits (421), Expect = 9e-049
Identities = 74/114 (64%), Positives = 89/114 (78%)
Frame = +2 / -2
Query: 98 KSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDTVSRHTIQVYPRSWTAIMLTFDNAG 277
KS+ S H DGY+FF V PG+W+PE R YNLLD VSRHT+QVYP+SW+AI+LTFDNAG
Sbjct: 455 KSMQSFHWDGYSFFXVASEPGRWTPEKRNNYNLLDAVSRHTVQVYPKSWSAILLTFDNAG 276
Query: 278 MWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMPDNALRCGKVVGLPLPPSY 439
MW++ S WER YLG+Q Y+SV+SP +SLRDEYN+P N CG V GLPLP Y
Sbjct: 275 MWNIRSENWERRYLGQQLYVSVLSPEKSLRDEYNIPLNTNLCGIVKGLPLPTPY 114
Score = 126 bits (270), Expect = 6e-028
Identities = 58/105 (55%), Positives = 69/105 (65%)
Frame = -1 / +1
Query: 411 TLPQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDRG 232
T+PQR LSGMLYSS SD +G+ TL NC P+ SQ + H+PALSNV +A D G
Sbjct: 142 TMPQRLVLSGMLYSSLSDFSGDRTLTYNCWPKYLLSQFSDLMFHIPALSNVKRMADQDLG 321
Query: 231 YTWIVCRLTVSSRLYVFLTSGDHFPGPIPTPKKA*PSTWRESMLF 97
YT VC LT SS+L +FL SG H PG T KK *PS W++ MLF
Sbjct: 322 YTCTVCLLTASSKL*LFLFSGVHLPGSEATXKKE*PSQWKDCMLF 456
>gb|CD530123.1|CD530123 39L4 Arabidopsis Leaf Senescence Library Arabidopsis thaliana cDNA
3', mRNA sequence
Length = 449
Score = 193 bits (416), Expect = 5e-048
Identities = 72/110 (65%), Positives = 87/110 (79%)
Frame = +2 / -3
Query: 110 SLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDTVSRHTIQVYPRSWTAIMLTFDNAGMWSV 289
S H+DGY+FF V PG+W+PE R YNLLD VSRHT+QVYP+SW+AI+LTFDNAGMW++
Sbjct: 444 SFHLDGYSFFAVASEPGRWTPEKRNNYNLLDAVSRHTVQVYPKSWSAILLTFDNAGMWNI 265
Query: 290 HSNIWERYYLGEQFYISVVSPARSLRDEYNMPDNALRCGKVVGLPLPPSY 439
S WER YLG+Q Y+SV+SP +SLRDEYN+P N CG V GLPLP Y
Sbjct: 264 RSENWERRYLGQQLYVSVLSPEKSLRDEYNIPLNTNLCGIVKGLPLPTPY 115
Score = 120 bits (257), Expect = 4e-026
Identities = 55/101 (54%), Positives = 66/101 (65%)
Frame = -1 / +2
Query: 411 TLPQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDRG 232
T+PQR LSGMLYSS SD +G+ TL NC P+ SQ + H+PALSNV +A D G
Sbjct: 143 TMPQRLVLSGMLYSSLSDFSGDRTLTYNCWPKYLLSQFSDLMFHIPALSNVKRMADQDLG 322
Query: 231 YTWIVCRLTVSSRLYVFLTSGDHFPGPIPTPKKA*PSTWRE 109
YT VC LT SS+L +FL SG H PG T KK *PS W++
Sbjct: 323 YTCTVCLLTASSKL*LFLFSGVHLPGSEATAKKE*PSKWKD 445
>ref|NM_102033.1| Arabidopsis thaliana SKS8; copper ion binding AT1G21850 (SKS8) mRNA,
complete cds
Length = 1656
Score = 193 bits (416), Expect = 5e-048
Identities = 73/134 (54%), Positives = 99/134 (73%)
Frame = +2 / +1
Query: 17 NGPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNL 196
+G ++ + +V+ +++ F+EIVFEN E + + H+DGY+FF VGM GKWS RK YNL
Sbjct: 1204 HGAIYPVTSVMQTDYKAFVEIVFENWEDIVQTWHLDGYSFFVVGMELGKWSAASRKVYNL 1383
Query: 197 LDTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEY 376
D VSR T+QVYPRSWTAI ++ DN GMW++ S +WER YLG+QFY+ V +P+ SLRDEY
Sbjct: 1384 NDAVSRCTVQVYPRSWTAIYVSLDNVGMWNLRSELWERQYLGQQFYMRVYTPSTSLRDEY 1563
Query: 377 NMPDNALRCGKVVG 418
+P NAL CG+ G
Sbjct: 1564 LIPKNALLCGRATG 1605
Score = 109 bits (232), Expect = 1e-022
Identities = 59/122 (48%), Positives = 70/122 (57%)
Frame = -1 / -2
Query: 408 LPQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDRGY 229
LPQRRA G+ YSS + G T M*NC PR S + H+P LS+ + +AVHD GY
Sbjct: 1595 LPQRRAFFGIKYSSLREVEGV*TRM*NCCPRYCLSHNSDLRFHIPTLSSDTYMAVHDLGY 1416
Query: 228 TWIVCRLTVSSRLYVFLTSGDHFPGPIPTPKKA*PSTWRESMLFSGFSKTISMKVRNSAV 49
T V R T S RL FL + HFP IPT KK *PS + + S FSKTIS K S
Sbjct: 1415 T*TVHRETASFRL*TFLLAALHFPSSIPTTKKE*PSRCQVWTISSQFSKTISTKAL*SVC 1236
Query: 48 MT 43
+T
Sbjct: 1235 IT 1230
>ref|NM_102034.1| Arabidopsis thaliana SKS7; copper ion binding AT1G21860 (SKS7) mRNA,
complete cds
Length = 1617
Score = 193 bits (415), Expect = 6e-048
Identities = 74/131 (56%), Positives = 95/131 (72%)
Frame = +2 / +1
Query: 17 NGPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNL 196
NG + +V+ A+FR F+E++FEN E + S H+DGY+F+ VGM GKWSP RK YNL
Sbjct: 1204 NGAIFPTTSVMQADFRAFVEVIFENSEDIVQSWHLDGYSFYVVGMELGKWSPASRKVYNL 1383
Query: 197 LDTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEY 376
D + R TIQVYPRSWTAI + DN GMW++ S IWER YLG+QFY+ V + + SLRDEY
Sbjct: 1384 NDAILRCTIQVYPRSWTAIYIALDNVGMWNMRSEIWERQYLGQQFYMRVYTTSTSLRDEY 1563
Query: 377 NMPDNALRCGK 409
+P NAL CG+
Sbjct: 1564 LIPKNALLCGR 1596
>gb|BX836294.1|BX836294 BX836294 Arabidopsis thaliana Hormone Treated Callus Col-0
Arabidopsis thaliana cDNA clone GSLTPGH72ZB11 3PRIM,
mRNA sequence
Length = 814
Score = 188 bits (404), Expect = 2e-046
Identities = 70/138 (50%), Positives = 97/138 (70%)
Frame = +2 / -1
Query: 20 GPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLL 199
G +++ +V+ ++RTF+EI+FEN E + S H+DGY+F+ VGM G+WSP+ R YNL
Sbjct: 574 GGIYLDTSVMQVDYRTFVEIIFENSEDIVQSWHLDGYSFWVVGMDGGQWSPDSRNEYNLR 395
Query: 200 DTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYN 379
D V+R T+QVYP SWTAI++ DN GMW++ S W R YLG+Q Y+ V +P+ SLRDEY
Sbjct: 394 DAVNRCTVQVYPSSWTAILIALDNVGMWNLRSEFWARQYLGQQLYLRVYTPSTSLRDEYP 215
Query: 380 MPDNALRCGKVVGLPLPP 433
+P NAL CG+ G P
Sbjct: 214 IPKNALLCGRASGRSTRP 161
Score = 105 bits (223), Expect = 2e-021
Identities = 57/122 (46%), Positives = 69/122 (56%)
Frame = -1 / +3
Query: 408 LPQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDRGY 229
LPQRRA G+ YSS + G T NC P+ +Q + H+P LS+ IAVH+ GY
Sbjct: 186 LPQRRAFLGIGYSSLREVEGVYTRKYNCCPKYCLAQNSDLRFHIPTLSSAINIAVHELGY 365
Query: 228 TWIVCRLTVSSRLYVFLTSGDHFPGPIPTPKKA*PSTWRESMLFSGFSKTISMKVRNSAV 49
T V R T S RLY FL SG H P IPT +K *PS + + S FSK IS KV S
Sbjct: 366 T*TVQRFTASRRLYSFLLSGLHCPPSIPTTQKE*PSRCQLWTISSEFSKIISTKVL*STC 545
Query: 48 MT 43
+T
Sbjct: 546 IT 551
>gb|CK118224.1|CK118224 217n04.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011N04217
5-PRIME, mRNA sequence
Length = 558
Score = 188 bits (404), Expect = 2e-046
Identities = 70/138 (50%), Positives = 97/138 (70%)
Frame = +2 / +3
Query: 20 GPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLL 199
G +++ +V+ ++RTF+EI+FEN E + S H+DGY+F+ VGM G+WSP+ R YNL
Sbjct: 30 GGIYLDTSVMQVDYRTFVEIIFENSEDIVQSWHLDGYSFWVVGMDGGQWSPDSRNEYNLR 209
Query: 200 DTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYN 379
D V+R T+QVYP SWTAI++ DN GMW++ S W R YLG+Q Y+ V +P+ SLRDEY
Sbjct: 210 DAVARCTVQVYPSSWTAILIALDNVGMWNLRSEFWARQYLGQQLYLRVYTPSTSLRDEYP 389
Query: 380 MPDNALRCGKVVGLPLPP 433
+P NAL CG+ G P
Sbjct: 390 IPKNALLCGRASGRSTRP 443
Score = 104 bits (222), Expect = 3e-021
Identities = 57/122 (46%), Positives = 69/122 (56%)
Frame = -1 / -3
Query: 408 LPQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDRGY 229
LPQRRA G+ YSS + G T NC P+ +Q + H+P LS+ IAVH+ GY
Sbjct: 418 LPQRRAFLGIGYSSLREVEGVYTRKYNCCPKYCLAQNSDLRFHIPTLSSAINIAVHELGY 239
Query: 228 TWIVCRLTVSSRLYVFLTSGDHFPGPIPTPKKA*PSTWRESMLFSGFSKTISMKVRNSAV 49
T V R T S RLY FL SG H P IPT +K *PS + + S FSK IS KV S
Sbjct: 238 T*TVQRATASRRLYSFLLSGLHCPPSIPTTQKE*PSRCQLWTISSEFSKIISTKVL*STC 59
Query: 48 MT 43
+T
Sbjct: 58 IT 53
>gb|AY057492.1| Arabidopsis thaliana At1g76160/T23E18_10 mRNA, complete cds
Length = 1934
Score = 188 bits (404), Expect = 2e-046
Identities = 70/138 (50%), Positives = 97/138 (70%)
Frame = +2 / +1
Query: 20 GPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLL 199
G +++ +V+ ++RTF+EI+FEN E + S H+DGY+F+ VGM G+WSP+ R YNL
Sbjct: 1273 GGIYLDTSVMQVDYRTFVEIIFENSEDIVQSWHLDGYSFWVVGMDGGQWSPDSRNEYNLR 1452
Query: 200 DTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYN 379
D V+R T+QVYP SWTAI++ DN GMW++ S W R YLG+Q Y+ V +P+ SLRDEY
Sbjct: 1453 DAVARCTVQVYPSSWTAILIALDNVGMWNLRSEFWARQYLGQQLYLRVYTPSTSLRDEYP 1632
Query: 380 MPDNALRCGKVVGLPLPP 433
+P NAL CG+ G P
Sbjct: 1633 IPKNALLCGRASGRSTRP 1686
Score = 104 bits (222), Expect = 3e-021
Identities = 57/122 (46%), Positives = 69/122 (56%)
Frame = -1 / -1
Query: 408 LPQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDRGY 229
LPQRRA G+ YSS + G T NC P+ +Q + H+P LS+ IAVH+ GY
Sbjct: 1661 LPQRRAFLGIGYSSLREVEGVYTRKYNCCPKYCLAQNSDLRFHIPTLSSAINIAVHELGY 1482
Query: 228 TWIVCRLTVSSRLYVFLTSGDHFPGPIPTPKKA*PSTWRESMLFSGFSKTISMKVRNSAV 49
T V R T S RLY FL SG H P IPT +K *PS + + S FSK IS KV S
Sbjct: 1481 T*TVQRATASRRLYSFLLSGLHCPPSIPTTQKE*PSRCQLWTISSEFSKIISTKVL*STC 1302
Query: 48 MT 43
+T
Sbjct: 1301 IT 1296
>ref|NM_106265.2| Arabidopsis thaliana SKS5; copper ion binding AT1G76160 (SKS5) mRNA,
complete cds
Length = 1987
Score = 188 bits (404), Expect = 2e-046
Identities = 70/138 (50%), Positives = 97/138 (70%)
Frame = +2 / +3
Query: 20 GPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLL 199
G +++ +V+ ++RTF+EI+FEN E + S H+DGY+F+ VGM G+WSP+ R YNL
Sbjct: 1299 GGIYLDTSVMQVDYRTFVEIIFENSEDIVQSWHLDGYSFWVVGMDGGQWSPDSRNEYNLR 1478
Query: 200 DTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYN 379
D V+R T+QVYP SWTAI++ DN GMW++ S W R YLG+Q Y+ V +P+ SLRDEY
Sbjct: 1479 DAVARCTVQVYPSSWTAILIALDNVGMWNLRSEFWARQYLGQQLYLRVYTPSTSLRDEYP 1658
Query: 380 MPDNALRCGKVVGLPLPP 433
+P NAL CG+ G P
Sbjct: 1659 IPKNALLCGRASGRSTRP 1712
Score = 104 bits (222), Expect = 3e-021
Identities = 57/122 (46%), Positives = 69/122 (56%)
Frame = -1 / -1
Query: 408 LPQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDRGY 229
LPQRRA G+ YSS + G T NC P+ +Q + H+P LS+ IAVH+ GY
Sbjct: 1687 LPQRRAFLGIGYSSLREVEGVYTRKYNCCPKYCLAQNSDLRFHIPTLSSAINIAVHELGY 1508
Query: 228 TWIVCRLTVSSRLYVFLTSGDHFPGPIPTPKKA*PSTWRESMLFSGFSKTISMKVRNSAV 49
T V R T S RLY FL SG H P IPT +K *PS + + S FSK IS KV S
Sbjct: 1507 T*TVQRATASRRLYSFLLSGLHCPPSIPTTQKE*PSRCQLWTISSEFSKIISTKVL*STC 1328
Query: 48 MT 43
+T
Sbjct: 1327 IT 1322
>gb|AV537619.1|AV537619 AV537619 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ09h05F 3', mRNA sequence
Length = 602
Score = 186 bits (400), Expect = 7e-046
Identities = 69/136 (50%), Positives = 96/136 (70%)
Frame = +2 / -1
Query: 26 LHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDT 205
+++ +V+ ++RTF+EI+FEN E + S H+DGY+F+ VGM G+WSP+ R YNL D
Sbjct: 602 IYLDTSVMQVDYRTFVEIIFENSEDIVQSWHLDGYSFWVVGMDGGQWSPDSRNEYNLRDA 423
Query: 206 VSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMP 385
V+R T+QVYP SWTAI++ DN GMW++ S W R YLG+Q Y+ V +P+ SLRDEY +P
Sbjct: 422 VARCTVQVYPSSWTAILIALDNVGMWNLRSEFWARQYLGQQLYLRVYTPSTSLRDEYPIP 243
Query: 386 DNALRCGKVVGLPLPP 433
NAL CG+ G P
Sbjct: 242 KNALLCGRASGRSTRP 195
Score = 104 bits (222), Expect = 3e-021
Identities = 57/122 (46%), Positives = 69/122 (56%)
Frame = -1 / +1
Query: 408 LPQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDRGY 229
LPQRRA G+ YSS + G T NC P+ +Q + H+P LS+ IAVH+ GY
Sbjct: 220 LPQRRAFLGIGYSSLREVEGVYTRKYNCCPKYCLAQNSDLRFHIPTLSSAINIAVHELGY 399
Query: 228 TWIVCRLTVSSRLYVFLTSGDHFPGPIPTPKKA*PSTWRESMLFSGFSKTISMKVRNSAV 49
T V R T S RLY FL SG H P IPT +K *PS + + S FSK IS KV S
Sbjct: 400 T*TVQRATASRRLYSFLLSGLHCPPSIPTTQKE*PSRCQLWTISSEFSKIISTKVL*STC 579
Query: 48 MT 43
+T
Sbjct: 580 IT 585
>gb|CK118777.1|CK118777 216b24.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011B24216
5-PRIME, mRNA sequence
Length = 673
Score = 186 bits (400), Expect = 7e-046
Identities = 69/136 (50%), Positives = 96/136 (70%)
Frame = +2 / +3
Query: 26 LHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDT 205
+++ +V+ ++RTF+EI+FEN E + S H+DGY+F+ VGM G+WSP+ R YNL D
Sbjct: 6 IYLDTSVMQVDYRTFVEIIFENSEDIVQSWHLDGYSFWVVGMDGGQWSPDSRNEYNLRDA 185
Query: 206 VSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMP 385
V+R T+QVYP SWTAI++ DN GMW++ S W R YLG+Q Y+ V +P+ SLRDEY +P
Sbjct: 186 VARCTVQVYPSSWTAILIALDNVGMWNLRSEFWARQYLGQQLYLRVYTPSTSLRDEYPIP 365
Query: 386 DNALRCGKVVGLPLPP 433
NAL CG+ G P
Sbjct: 366 KNALLCGRASGRSTRP 413
Score = 104 bits (222), Expect = 3e-021
Identities = 57/122 (46%), Positives = 69/122 (56%)
Frame = -1 / -1
Query: 408 LPQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDRGY 229
LPQRRA G+ YSS + G T NC P+ +Q + H+P LS+ IAVH+ GY
Sbjct: 388 LPQRRAFLGIGYSSLREVEGVYTRKYNCCPKYCLAQNSDLRFHIPTLSSAINIAVHELGY 209
Query: 228 TWIVCRLTVSSRLYVFLTSGDHFPGPIPTPKKA*PSTWRESMLFSGFSKTISMKVRNSAV 49
T V R T S RLY FL SG H P IPT +K *PS + + S FSK IS KV S
Sbjct: 208 T*TVQRATASRRLYSFLLSGLHCPPSIPTTQKE*PSRCQLWTISSEFSKIISTKVL*STC 29
Query: 48 MT 43
+T
Sbjct: 28 IT 23
>gb|AY136404.1| Arabidopsis thaliana pectinesterase, putative (At1g76160) mRNA,
complete cds
Length = 1914
Score = 185 bits (399), Expect = 1e-045
Identities = 69/138 (50%), Positives = 96/138 (69%)
Frame = +2 / +1
Query: 20 GPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLL 199
G +++ +V+ ++RTF+EI+FEN E + S H+DGY+F+ VGM G+WSP+ R YNL
Sbjct: 1255 GGIYLDTSVMQVDYRTFVEIIFENSEDIVQSWHLDGYSFWVVGMDGGQWSPDSRNEYNLR 1434
Query: 200 DTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYN 379
D V+R T+QVYP SWTAI++ DN GMW++ W R YLG+Q Y+ V +P+ SLRDEY
Sbjct: 1435 DAVARCTVQVYPSSWTAILIALDNVGMWNLRPEFWARQYLGQQLYLRVYTPSTSLRDEYP 1614
Query: 380 MPDNALRCGKVVGLPLPP 433
+P NAL CG+ G P
Sbjct: 1615 IPKNALLCGRASGRSTRP 1668
Score = 102 bits (218), Expect = 9e-021
Identities = 57/122 (46%), Positives = 68/122 (55%)
Frame = -1 / -2
Query: 408 LPQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDRGY 229
LPQRRA G+ YSS + G T NC P+ +Q H+P LS+ IAVH+ GY
Sbjct: 1643 LPQRRAFLGIGYSSLREVEGVYTRKYNCCPKYCLAQNSGLRFHIPTLSSAINIAVHELGY 1464
Query: 228 TWIVCRLTVSSRLYVFLTSGDHFPGPIPTPKKA*PSTWRESMLFSGFSKTISMKVRNSAV 49
T V R T S RLY FL SG H P IPT +K *PS + + S FSK IS KV S
Sbjct: 1463 T*TVQRATASRRLYSFLLSGLHCPPSIPTTQKE*PSRCQLWTISSEFSKIISTKVL*STC 1284
Query: 48 MT 43
+T
Sbjct: 1283 IT 1278
>gb|BT000227.1| Arabidopsis thaliana pectinesterase, putative (At1g76160) mRNA,
complete cds
Length = 1662
Score = 185 bits (399), Expect = 1e-045
Identities = 69/138 (50%), Positives = 96/138 (69%)
Frame = +2 / +1
Query: 20 GPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLL 199
G +++ +V+ ++RTF+EI+FEN E + S H+DGY+F+ VGM G+WSP+ R YNL
Sbjct: 1207 GGIYLDTSVMQVDYRTFVEIIFENSEDIVQSWHLDGYSFWVVGMDGGQWSPDSRNEYNLR 1386
Query: 200 DTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYN 379
D V+R T+QVYP SWTAI++ DN GMW++ W R YLG+Q Y+ V +P+ SLRDEY
Sbjct: 1387 DAVARCTVQVYPSSWTAILIALDNVGMWNLRPEFWARQYLGQQLYLRVYTPSTSLRDEYP 1566
Query: 380 MPDNALRCGKVVGLPLPP 433
+P NAL CG+ G P
Sbjct: 1567 IPKNALLCGRASGRSTRP 1620
Score = 102 bits (218), Expect = 9e-021
Identities = 57/122 (46%), Positives = 68/122 (55%)
Frame = -1 / -2
Query: 408 LPQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDRGY 229
LPQRRA G+ YSS + G T NC P+ +Q H+P LS+ IAVH+ GY
Sbjct: 1595 LPQRRAFLGIGYSSLREVEGVYTRKYNCCPKYCLAQNSGLRFHIPTLSSAINIAVHELGY 1416
Query: 228 TWIVCRLTVSSRLYVFLTSGDHFPGPIPTPKKA*PSTWRESMLFSGFSKTISMKVRNSAV 49
T V R T S RLY FL SG H P IPT +K *PS + + S FSK IS KV S
Sbjct: 1415 T*TVQRATASRRLYSFLLSGLHCPPSIPTTQKE*PSRCQLWTISSEFSKIISTKVL*STC 1236
Query: 48 MT 43
+T
Sbjct: 1235 IT 1230
>gb|AV537452.1|AV537452 AV537452 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ06c11F 3', mRNA sequence
Length = 617
Score = 181 bits (390), Expect = 2e-044
Identities = 69/134 (51%), Positives = 92/134 (68%)
Frame = +2 / -2
Query: 17 NGPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNL 196
N P V +V+ F+EIVF+N EKS+ S H+DGY F+ VG G G+W+P R +NL
Sbjct: 616 NSPPTVATSVVQTSHHDFLEIVFQNNEKSMQSWHLDGYDFWVVGFGSGQWTPAKRSLHNL 437
Query: 197 LDTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEY 376
+D ++RHT QVYP SWT I+++ DN GMW++ S IWER Y G+QFY+ V + +SL +EY
Sbjct: 436 VDALTRHTTQVYPESWTTILVSLDNQGMWNMRSAIWERQYSGQQFYLKVWNSVQSLANEY 257
Query: 377 NMPDNALRCGKVVG 418
N PDN CGK VG
Sbjct: 256 NPPDNLQLCGKAVG 215
>gb|AY094401.1| Arabidopsis thaliana AT5g66920/MUD21_18 mRNA, complete cds
Length = 2010
Score = 181 bits (390), Expect = 2e-044
Identities = 69/134 (51%), Positives = 92/134 (68%)
Frame = +2 / +3
Query: 17 NGPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNL 196
N P V +V+ F+EIVF+N EKS+ S H+DGY F+ VG G G+W+P R +NL
Sbjct: 1341 NSPPTVATSVVQTSHHDFLEIVFQNNEKSMQSWHLDGYDFWVVGFGSGQWTPAKRSLHNL 1520
Query: 197 LDTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEY 376
+D ++RHT QVYP SWT I+++ DN GMW++ S IWER Y G+QFY+ V + +SL +EY
Sbjct: 1521 VDALTRHTTQVYPESWTTILVSLDNQGMWNMRSAIWERQYSGQQFYLKVWNSVQSLANEY 1700
Query: 377 NMPDNALRCGKVVG 418
N PDN CGK VG
Sbjct: 1701 NPPDNLQLCGKAVG 1742
>gb|BT000862.1| Arabidopsis thaliana At5g66920/MUD21_18 mRNA, complete cds
Length = 1641
Score = 181 bits (390), Expect = 2e-044
Identities = 69/134 (51%), Positives = 92/134 (68%)
Frame = +2 / +1
Query: 17 NGPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNL 196
N P V +V+ F+EIVF+N EKS+ S H+DGY F+ VG G G+W+P R +NL
Sbjct: 1228 NSPPTVATSVVQTSHHDFLEIVFQNNEKSMQSWHLDGYDFWVVGFGSGQWTPAKRSLHNL 1407
Query: 197 LDTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEY 376
+D ++RHT QVYP SWT I+++ DN GMW++ S IWER Y G+QFY+ V + +SL +EY
Sbjct: 1408 VDALTRHTTQVYPESWTTILVSLDNQGMWNMRSAIWERQYSGQQFYLKVWNSVQSLANEY 1587
Query: 377 NMPDNALRCGKVVG 418
N PDN CGK VG
Sbjct: 1588 NPPDNLQLCGKAVG 1629
>emb|BX831134.1|CNS09ZEQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS5ZH03 of Adult vegetative tissue of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1832
Score = 181 bits (390), Expect = 2e-044
Identities = 69/134 (51%), Positives = 92/134 (68%)
Frame = +2 / +2
Query: 17 NGPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNL 196
N P V +V+ F+EIVF+N EKS+ S H+DGY F+ VG G G+W+P R +NL
Sbjct: 1286 NSPPTVATSVVQTSHHDFLEIVFQNNEKSMQSWHLDGYDFWVVGFGSGQWTPAKRSLHNL 1465
Query: 197 LDTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEY 376
+D ++RHT QVYP SWT I+++ DN GMW++ S IWER Y G+QFY+ V + +SL +EY
Sbjct: 1466 VDALTRHTTQVYPESWTTILVSLDNQGMWNMRSAIWERQYSGQQFYLKVWNSVQSLANEY 1645
Query: 377 NMPDNALRCGKVVG 418
N PDN CGK VG
Sbjct: 1646 NPPDNLQLCGKAVG 1687
>ref|NM_126091.2| Arabidopsis thaliana SKS17; copper ion binding AT5G66920 (SKS17)
mRNA, complete cds
Length = 2010
Score = 181 bits (390), Expect = 2e-044
Identities = 69/134 (51%), Positives = 92/134 (68%)
Frame = +2 / +3
Query: 17 NGPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNL 196
N P V +V+ F+EIVF+N EKS+ S H+DGY F+ VG G G+W+P R +NL
Sbjct: 1341 NSPPTVATSVVQTSHHDFLEIVFQNNEKSMQSWHLDGYDFWVVGFGSGQWTPAKRSLHNL 1520
Query: 197 LDTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEY 376
+D ++RHT QVYP SWT I+++ DN GMW++ S IWER Y G+QFY+ V + +SL +EY
Sbjct: 1521 VDALTRHTTQVYPESWTTILVSLDNQGMWNMRSAIWERQYSGQQFYLKVWNSVQSLANEY 1700
Query: 377 NMPDNALRCGKVVG 418
N PDN CGK VG
Sbjct: 1701 NPPDNLQLCGKAVG 1742
>gb|AY081335.1| Arabidopsis thaliana pectinesterase-like protein (At4g22010) mRNA,
complete cds
Length = 1980
Score = 181 bits (389), Expect = 2e-044
Identities = 70/126 (55%), Positives = 88/126 (69%)
Frame = +2 / +1
Query: 41 NVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDTVSRHT 220
+V+ A FR FIE+VF+N E S+ S HV GY+FF VGM G+W+P R YNL D VSR T
Sbjct: 1333 SVMAANFREFIEVVFQNWENSVQSWHVSGYSFFVVGMDGGQWTPGSRAKYNLRDAVSRST 1512
Query: 221 IQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMPDNALR 400
+QVYPR+WTAI + DN GMW++ S W R YLG+QFY+ V + + S RDEY P NAL
Sbjct: 1513 VQVYPRAWTAIYIALDNVGMWNIRSENWARQYLGQQFYLRVYTSSTSYRDEYPPPKNALM 1692
Query: 401 CGKVVG 418
CG+ G
Sbjct: 1693 CGRAKG 1710
>emb|AX507059.1| Sequence 1754 from Patent WO0216655
Length = 1626
Score = 181 bits (389), Expect = 2e-044
Identities = 70/126 (55%), Positives = 88/126 (69%)
Frame = +2 / +1
Query: 41 NVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDTVSRHT 220
+V+ A FR FIE+VF+N E S+ S HV GY+FF VGM G+W+P R YNL D VSR T
Sbjct: 1228 SVMAANFREFIEVVFQNWENSVQSWHVSGYSFFVVGMDGGQWTPGSRAKYNLRDAVSRST 1407
Query: 221 IQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMPDNALR 400
+QVYPR+WTAI + DN GMW++ S W R YLG+QFY+ V + + S RDEY P NAL
Sbjct: 1408 VQVYPRAWTAIYIALDNVGMWNIRSENWARQYLGQQFYLRVYTSSTSYRDEYPPPKNALM 1587
Query: 401 CGKVVG 418
CG+ G
Sbjct: 1588 CGRAKG 1605
>gb|AY084759.1| Arabidopsis thaliana clone 116979 mRNA, complete sequence
Length = 1930
Score = 181 bits (389), Expect = 2e-044
Identities = 68/134 (50%), Positives = 92/134 (68%)
Frame = +2 / +3
Query: 17 NGPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNL 196
N P V +++ F+EIVF+N EKS+ S H+DGY F+ VG G G+W+P R +NL
Sbjct: 1299 NSPPTVATSIVQTSHHDFLEIVFQNNEKSMQSWHLDGYDFWVVGFGSGQWTPTKRSLHNL 1478
Query: 197 LDTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEY 376
+D ++RHT QVYP SWT I+++ DN GMW++ S IWER Y G+QFY+ V + +SL +EY
Sbjct: 1479 VDALTRHTTQVYPESWTTILVSLDNQGMWNMRSAIWERQYSGQQFYLKVWNSVQSLANEY 1658
Query: 377 NMPDNALRCGKVVG 418
N PDN CGK VG
Sbjct: 1659 NPPDNLQLCGKAVG 1700
>gb|BT008899.1| Arabidopsis thaliana At4g22010 mRNA, complete cds
Length = 1626
Score = 181 bits (389), Expect = 2e-044
Identities = 70/126 (55%), Positives = 88/126 (69%)
Frame = +2 / +1
Query: 41 NVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDTVSRHT 220
+V+ A FR FIE+VF+N E S+ S HV GY+FF VGM G+W+P R YNL D VSR T
Sbjct: 1228 SVMAANFREFIEVVFQNWENSVQSWHVSGYSFFVVGMDGGQWTPGSRAKYNLRDAVSRST 1407
Query: 221 IQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMPDNALR 400
+QVYPR+WTAI + DN GMW++ S W R YLG+QFY+ V + + S RDEY P NAL
Sbjct: 1408 VQVYPRAWTAIYIALDNVGMWNIRSENWARQYLGQQFYLRVYTSSTSYRDEYPPPKNALM 1587
Query: 401 CGKVVG 418
CG+ G
Sbjct: 1588 CGRAKG 1605
>ref|NM_118322.3| Arabidopsis thaliana SKS4; copper ion binding AT4G22010 (SKS4) mRNA,
complete cds
Length = 1983
Score = 181 bits (389), Expect = 2e-044
Identities = 70/126 (55%), Positives = 88/126 (69%)
Frame = +2 / +1
Query: 41 NVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDTVSRHT 220
+V+ A FR FIE+VF+N E S+ S HV GY+FF VGM G+W+P R YNL D VSR T
Sbjct: 1333 SVMAANFREFIEVVFQNWENSVQSWHVSGYSFFVVGMDGGQWTPGSRAKYNLRDAVSRST 1512
Query: 221 IQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMPDNALR 400
+QVYPR+WTAI + DN GMW++ S W R YLG+QFY+ V + + S RDEY P NAL
Sbjct: 1513 VQVYPRAWTAIYIALDNVGMWNIRSENWARQYLGQQFYLRVYTSSTSYRDEYPPPKNALM 1692
Query: 401 CGKVVG 418
CG+ G
Sbjct: 1693 CGRAKG 1710
>gb|AV544145.1|AV544145 AV544145 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ34e12F 3', mRNA sequence
Length = 619
Score = 179 bits (386), Expect = 6e-044
Identities = 70/126 (55%), Positives = 88/126 (69%)
Frame = +2 / -3
Query: 41 NVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDTVSRHT 220
+V+ A FR FIE+VF+N E S+ S HV GY+FF VGM G+W+P R YNL D VSR T
Sbjct: 482 SVMAANFREFIEVVFQNWENSVQSWHVSGYSFFVVGMDGGQWTPGSRAKYNLRDAVSRST 303
Query: 221 IQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMPDNALR 400
+QVYPR+WTAI + DN GMW++ S W R YLG+QFY+ V + + S RDEY P NAL
Sbjct: 302 VQVYPRAWTAIYIALDNVGMWNIRSENWARQYLGQQFYLRVYTSSTSDRDEYPPPKNALM 123
Query: 401 CGKVVG 418
CG+ G
Sbjct: 122 CGRAKG 105
>gb|AV549603.1|AV549603 AV549603 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ09h05R 5', mRNA sequence
Length = 539
Score = 177 bits (380), Expect = 4e-043
Identities = 65/125 (52%), Positives = 91/125 (72%)
Frame = +2 / +1
Query: 20 GPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLL 199
G +++ +V+ ++RTF+EI+FEN E + S H+DGY+F+ VGM G+WSP+ R YNL
Sbjct: 163 GGIYLDTSVMQVDYRTFVEIIFENSEDIVQSWHLDGYSFWVVGMDGGQWSPDSRNEYNLR 342
Query: 200 DTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYN 379
D V+R T+QVYP SWTAI++ DN GMW++ S W R YLG+Q Y+ V +P+ SLRDEY
Sbjct: 343 DAVARCTVQVYPSSWTAILIALDNVGMWNLRSEFWARQYLGQQLYLRVYTPSTSLRDEYP 522
Query: 380 MPDNA 394
+P NA
Sbjct: 523 IPKNA 537
>gb|AV558425.1|AV558425 AV558425 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ098d11F 3', mRNA sequence
Length = 581
Score = 174 bits (375), Expect = 2e-042
Identities = 65/117 (55%), Positives = 86/117 (73%)
Frame = +2 / -1
Query: 68 FIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDTVSRHTIQVYPRSWT 247
F+EIVF+N EKS+ S H+DGY F+ VG G G+W+P R +NL+D ++RHT QVYP SWT
Sbjct: 575 FLEIVFQNNEKSMQSWHLDGYDFWVVGFGSGQWTPAKRSLHNLVDALTRHTTQVYPESWT 396
Query: 248 AIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMPDNALRCGKVVG 418
I+++ DN GMW++ S IWER Y G+QFY+ V + +SL +EYN PDN CGK VG
Sbjct: 395 TILVSLDNQGMWNMRSAIWERQYSGQQFYLKVWNSVQSLANEYNPPDNLQLCGKAVG 225
>gb|CB261040.1|CB261040 39-E9570-012-004-M09-T7R MPIZ-ADIS-012 Arabidopsis thaliana cDNA
clone MPIZp769M094Q 5-PRIME, mRNA sequence
Length = 702
Score = 174 bits (374), Expect = 3e-042
Identities = 67/133 (50%), Positives = 91/133 (68%)
Frame = +2 / +1
Query: 20 GPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLL 199
G L++ +V+ ++RTFIEIVFEN E + S H++GY+F+ VGM G+W R YNL
Sbjct: 139 GGLYLDTSVLQVDYRTFIEIVFENQEDIVQSYHLNGYSFWVVGMDGGQWKTGSRNGYNLR 318
Query: 200 DTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYN 379
D VSR T+QVYP+SWTAI + DN GMW++ S W R YLG+Q Y+ V + + SLRDEY
Sbjct: 319 DAVSRSTVQVYPKSWTAIYIALDNVGMWNLRSEFWARQYLGQQLYLRVFTSSTSLRDEYP 498
Query: 380 MPDNALRCGKVVG 418
+P N+ CG+ G
Sbjct: 499 IPKNSRLCGRARG 537
>gb|CD530290.1|CD530290 05J01 Arabidopsis Leaf Senescence Library Arabidopsis thaliana cDNA
3', mRNA sequence
Length = 538
Score = 174 bits (374), Expect = 3e-042
Identities = 66/123 (53%), Positives = 85/123 (69%)
Frame = +2 / +3
Query: 41 NVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDTVSRHT 220
+V+ A R F+EI+F+N EK + S H+DGY+F+ VG G WS R+ YNL D +SR T
Sbjct: 21 SVMGAHHRDFLEIIFQNREKIVQSYHLDGYSFWVVGTDRGTWSKASRREYNLRDAISRST 200
Query: 221 IQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMPDNALR 400
QVYP SWTA+ + DN GMW++ S W R YLG+QFY+ V SP SLRDEY +P NAL
Sbjct: 201 TQVYPESWTAVYVALDNVGMWNLRSEYWARQYLGQQFYLRVYSPTHSLRDEYLLPKNALL 380
Query: 401 CGK 409
CG+
Sbjct: 381 CGR 389
>gb|AV546963.1|AV546963 AV546963 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZL22e02F 3', mRNA sequence
Length = 594
Score = 174 bits (374), Expect = 3e-042
Identities = 66/123 (53%), Positives = 85/123 (69%)
Frame = +2 / -1
Query: 41 NVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDTVSRHT 220
+V+ A R F+EI+F+N EK + S H+DGY+F+ VG G WS R+ YNL D +SR T
Sbjct: 579 SVMGAHHRDFLEIIFQNREKIVQSYHLDGYSFWVVGTDRGTWSKASRREYNLRDAISRST 400
Query: 221 IQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMPDNALR 400
QVYP SWTA+ + DN GMW++ S W R YLG+QFY+ V SP SLRDEY +P NAL
Sbjct: 399 TQVYPESWTAVYVALDNVGMWNLRSEYWARQYLGQQFYLRVYSPTHSLRDEYLLPKNALL 220
Query: 401 CGK 409
CG+
Sbjct: 219 CGR 211
>gb|CK117520.1|CK117520 218e09.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011E09218
5-PRIME, mRNA sequence
Length = 770
Score = 174 bits (374), Expect = 3e-042
Identities = 67/133 (50%), Positives = 91/133 (68%)
Frame = +2 / +3
Query: 20 GPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLL 199
G L++ +V+ ++RTFIEIVFEN E + S H++GY+F+ VGM G+W R YNL
Sbjct: 363 GGLYLDTSVLQVDYRTFIEIVFENQEDIVQSYHLNGYSFWVVGMDGGQWKTGSRNGYNLR 542
Query: 200 DTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYN 379
D VSR T+QVYP+SWTAI + DN GMW++ S W R YLG+Q Y+ V + + SLRDEY
Sbjct: 543 DAVSRSTVQVYPKSWTAIYIALDNVGMWNLRSEFWARQYLGQQLYLRVFTSSTSLRDEYP 722
Query: 380 MPDNALRCGKVVG 418
+P N+ CG+ G
Sbjct: 723 IPKNSRLCGRARG 761
>gb|AY059814.1| Arabidopsis thaliana Unknown protein mRNA, complete cds
Length = 1963
Score = 174 bits (374), Expect = 3e-042
Identities = 67/133 (50%), Positives = 91/133 (68%)
Frame = +2 / +3
Query: 20 GPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLL 199
G L++ +V+ ++RTFIEIVFEN E + S H++GY+F+ VGM G+W R YNL
Sbjct: 1269 GGLYLDTSVLQVDYRTFIEIVFENQEDIVQSYHLNGYSFWVVGMDGGQWETGSRNGYNLR 1448
Query: 200 DTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYN 379
D VSR T+QVYP+SWTAI + DN GMW++ S W R YLG+Q Y+ V + + SLRDEY
Sbjct: 1449 DAVSRSTVQVYPKSWTAIYIALDNVGMWNLRSEFWARQYLGQQLYLRVFTSSTSLRDEYP 1628
Query: 380 MPDNALRCGKVVG 418
+P N+ CG+ G
Sbjct: 1629 IPKNSRLCGRARG 1667
>gb|AY128725.1| Arabidopsis thaliana unknown protein (At1g41830) mRNA, complete cds
Length = 1666
Score = 174 bits (374), Expect = 3e-042
Identities = 67/133 (50%), Positives = 91/133 (68%)
Frame = +2 / +1
Query: 20 GPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLL 199
G L++ +V+ ++RTFIEIVFEN E + S H++GY+F+ VGM G+W R YNL
Sbjct: 1210 GGLYLDTSVLQVDYRTFIEIVFENQEDIVQSYHLNGYSFWVVGMDGGQWETGSRNGYNLR 1389
Query: 200 DTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYN 379
D VSR T+QVYP+SWTAI + DN GMW++ S W R YLG+Q Y+ V + + SLRDEY
Sbjct: 1390 DAVSRSTVQVYPKSWTAIYIALDNVGMWNLRSEFWARQYLGQQLYLRVFTSSTSLRDEYP 1569
Query: 380 MPDNALRCGKVVG 418
+P N+ CG+ G
Sbjct: 1570 IPKNSRLCGRARG 1608
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,151,075,648
Number of Sequences: 1013581
Number of extensions: 14396823
Number of successful extensions: 151281
Number of sequences better than 1.0e-020: 209
length of database: 302,980,290
effective HSP length: 55
effective length of database: 247,233,335
effective search space used: 41535200280
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)