TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3115184.2.3
(1548 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AY065239.1| Arabidopsis thaliana putative polygalacturon... 381 e-104
gb|AY096534.1| Arabidopsis thaliana putative polygalacturon... 381 e-104
gb|AY087578.1| Arabidopsis thaliana clone 36765 mRNA, compl... 381 e-104
ref|NM_111661.2| Arabidopsis thaliana polygalacturonase AT3... 381 e-104
emb|AJ005584.1|ATH005584 Arabidopsis thaliana mRNA for poly... 380 e-104
emb|BX823174.1|CNS0A74O Arabidopsis thaliana Full-length cD... 378 e-103
ref|NM_111663.2| Arabidopsis thaliana polygalacturonase AT3... 374 e-102
ref|NM_111662.2| Arabidopsis thaliana polygalacturonase AT3... 369 e-100
ref|NM_106487.2| Arabidopsis thaliana polygalacturonase AT1... 298 7e-097
emb|BX822574.1|CNS0A73L Arabidopsis thaliana Full-length cD... 355 2e-096
dbj|AK118684.1| Arabidopsis thaliana At5g48140 mRNA for put... 322 1e-095
ref|NM_124188.2| Arabidopsis thaliana polygalacturonase AT5... 322 1e-095
gb|BT009687.1| Arabidopsis thaliana At5g48140 mRNA, complet... 322 1e-095
gb|AY089015.1| Arabidopsis thaliana clone 16377 mRNA, compl... 321 3e-095
ref|NM_101576.1| Arabidopsis thaliana polygalacturonase AT1... 297 3e-095
gb|AC013483.7|ATAC013483 Arabidopsis thaliana chromosome II... 221 2e-094
emb|AJ003135.1|ATAJ3135 Arabidopsis thaliana PGA5 gene, com... 210 3e-094
ref|NM_128219.1| Arabidopsis thaliana polygalacturonase AT2... 310 2e-093
ref|NM_103464.1| Arabidopsis thaliana polygalacturonase AT1... 262 2e-092
gb|DQ056483.1| Arabidopsis thaliana glycoside hydrolase fam... 261 6e-092
ref|NM_103463.1| Arabidopsis thaliana polygalacturonase AT1... 261 6e-092
ref|NM_103465.1| Arabidopsis thaliana polygalacturonase AT1... 262 7e-091
ref|NM_127105.1| Arabidopsis thaliana polygalacturonase AT2... 260 5e-090
ref|NM_127106.1| Arabidopsis thaliana polygalacturonase AT2... 260 5e-090
ref|NM_117928.1| Arabidopsis thaliana polygalacturonase AT4... 316 8e-090
ref|NM_128875.1| Arabidopsis thaliana polygalacturonase AT2... 264 9e-090
emb|X73222.1|ATEGP A.thaliana mRNA for exopolygalacturonase 193 1e-089
ref|NM_129589.1| Arabidopsis thaliana polygalacturonase AT2... 257 2e-089
ref|NM_112258.2| Arabidopsis thaliana polygalacturonase AT3... 192 3e-089
ref|NM_117450.1| Arabidopsis thaliana polygalacturonase AT4... 258 3e-089
ref|NM_127107.2| Arabidopsis thaliana polygalacturonase AT2... 259 7e-088
emb|X72292.1|ATEXOPB A.thaliana (clone GBGa483) mRNA for ex... 193 1e-087
gb|AY062447.1| Arabidopsis thaliana polygalacturonase; pect... 192 2e-087
gb|AY114635.1| Arabidopsis thaliana polygalacturonase; pect... 192 2e-087
gb|AY056173.1| Arabidopsis thaliana putative exopolygalactu... 193 7e-087
ref|NM_111664.1| Arabidopsis thaliana polygalacturonase AT3... 193 7e-087
gb|AY091200.1| Arabidopsis thaliana putative exopolygalactu... 193 7e-087
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 230 5e-086
emb|AX652128.1| Sequence 1979 from Patent WO03000898 230 5e-086
gb|AC013430.5|AC013430 Genomic sequence for Arabidopsis tha... 230 5e-086
emb|BX823616.1|CNS0A4Y3 Arabidopsis thaliana Full-length cD... 165 2e-084
emb|BX819999.1|CNS0AA2M Arabidopsis thaliana Full-length cD... 261 6e-084
dbj|AB023039.1| Arabidopsis thaliana genomic DNA, chromosom... 222 3e-079
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 221 4e-078
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 221 4e-078
gb|AC026757.12|AC026757 Arabidopsis thaliana chromosome 1 B... 214 8e-076
gb|AC002334.3| Arabidopsis thaliana chromosome 2 clone F25I... 143 3e-075
dbj|AB019229.1| Arabidopsis thaliana genomic DNA, chromosom... 165 4e-075
emb|AJ223189.1|ATAJ3189 Arabidopsis thaliana PGA2 gene 165 4e-075
gb|AC006920.11| Arabidopsis thaliana chromosome 2 clone F26... 213 4e-074
gb|AC007020.5| Arabidopsis thaliana chromosome 2 clone T3G2... 208 8e-074
gb|AF085279.1|AF085279 Arabidopsis thaliana ABA-regulated g... 208 1e-073
gb|AC002505.3| Arabidopsis thaliana chromosome 2 clone T9J2... 210 3e-073
emb|AL035528.2|ATF18A5 Arabidopsis thaliana DNA chromosome ... 211 3e-072
gb|DQ056578.1| Arabidopsis thaliana putative polygalacturon... 156 4e-072
ref|NM_129951.1| Arabidopsis thaliana polygalacturonase AT2... 156 4e-072
gb|AC007651.2| Arabidopsis thaliana chromosome I BAC F20D23... 199 7e-072
emb|AL161537.2|ATCHRIV37 Arabidopsis thaliana DNA chromosom... 211 1e-071
gb|AC006248.4| Arabidopsis thaliana chromosome 2 clone F9O1... 213 1e-071
dbj|AK117953.1| Arabidopsis thaliana At3g07830 mRNA for put... 270 8e-071
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 211 1e-070
emb|AL161548.2|ATCHRIV48 Arabidopsis thaliana DNA chromosom... 119 1e-070
emb|AL021713.1|ATT9A21 Arabidopsis thaliana DNA chromosome ... 119 1e-070
emb|AL110123.1|ATF15J5 Arabidopsis thaliana DNA chromosome ... 119 1e-070
emb|AX507825.1| Sequence 2520 from Patent WO0216655 147 6e-070
ref|NM_100446.1| Arabidopsis thaliana polygalacturonase AT1... 147 6e-070
ref|NM_129950.1| Arabidopsis thaliana polygalacturonase AT2... 155 1e-069
ref|NM_115611.2| Arabidopsis thaliana ADPG1; polygalacturon... 152 6e-069
dbj|AK117942.1| Arabidopsis thaliana At3g57510 mRNA for put... 152 6e-069
emb|AX412563.1| Sequence 327 from Patent WO0222675 152 6e-069
gb|BT005376.1| Arabidopsis thaliana At3g57510 mRNA, complet... 152 6e-069
emb|AX651724.1| Sequence 557 from Patent WO03000898 152 6e-069
ref|NM_106666.2| Arabidopsis thaliana polygalacturonase AT1... 149 1e-068
gb|AY046002.1| Arabidopsis thaliana putative polygalacturon... 149 1e-068
gb|AY142668.1| Arabidopsis thaliana putative polygalacturon... 149 1e-068
ref|NM_111676.3| Arabidopsis thaliana polygalacturonase AT3... 150 7e-068
ref|NM_105718.1| Arabidopsis thaliana polygalacturonase AT1... 149 2e-067
gb|AF428425.1|AF428425 Arabidopsis thaliana At1g02790/T14P4... 210 3e-066
ref|NM_100158.1| Arabidopsis thaliana PGA4 (POLYGALACTURONA... 210 3e-066
gb|AY065210.1| Arabidopsis thaliana putative polygalacturon... 210 3e-066
emb|X72291.1|ATEXOPA A.thaliana (clone GBGe184) mRNA for ex... 210 3e-066
gb|AY133812.1| Arabidopsis thaliana clone U18487 putative p... 210 3e-066
ref|NM_180028.1| Arabidopsis thaliana polygalacturonase AT2... 151 3e-066
emb|BX813348.1|CNS0AE3X Arabidopsis thaliana Full-length cD... 147 4e-066
emb|AX651722.1| Sequence 554 from Patent WO03000898 148 2e-065
ref|NM_100445.1| Arabidopsis thaliana polygalacturonase AT1... 141 2e-065
gb|AY078936.1| Arabidopsis thaliana At2g41850/T11A7.5 mRNA,... 152 5e-065
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 199 6e-065
gb|AU238792.1|AU238792 AU238792 RAFL19 Arabidopsis thaliana... 250 1e-064
gb|AC022521.4|AC022521 Arabidopsis thaliana chromosome I BA... 170 4e-064
gb|AC009525.3| Arabidopsis thaliana chromosome I BAC F22D16... 170 4e-064
emb|Y16230.1|ATPGA3GE Arabidopsis thaliana PGA3 gene 170 4e-064
emb|BX822956.1|CNS0A7SM Arabidopsis thaliana Full-length cD... 101 8e-064
gb|AC004005.3| Arabidopsis thaliana chromosome 2 clone F6E1... 118 6e-063
gb|BT020180.1| Arabidopsis thaliana At3g59850 mRNA, complet... 164 9e-063
gb|BT015766.1| Arabidopsis thaliana At3g59850 mRNA, complet... 164 1e-062
emb|BX823105.1|CNS0A4UN Arabidopsis thaliana Full-length cD... 164 1e-062
ref|NM_115848.3| Arabidopsis thaliana polygalacturonase AT3... 164 2e-062
emb|BX824927.1|CNS0A4TY Arabidopsis thaliana Full-length cD... 164 2e-062
gb|CK118633.1|CK118633 216g11.p1 AtM1 Arabidopsis thaliana ... 241 6e-062
emb|BX822380.1|CNS0A76T Arabidopsis thaliana Full-length cD... 164 1e-061
ref|NM_105231.1| Arabidopsis thaliana polygalacturonase AT1... 165 4e-061
ref|NM_112442.1| Arabidopsis thaliana polygalacturonase AT3... 153 5e-061
gb|DQ056577.1| Arabidopsis thaliana putative polygalacturon... 168 8e-061
ref|NM_129948.1| Arabidopsis thaliana polygalacturonase AT2... 168 8e-061
ref|NM_102195.1| Arabidopsis thaliana polygalacturonase AT1... 150 1e-060
gb|AY089177.1| Arabidopsis thaliana clone 6 mRNA, complete ... 149 8e-060
gb|BT005245.1| Arabidopsis thaliana At3g07830 mRNA, complet... 233 9e-060
emb|AX651258.1| Sequence 42 from Patent WO03000898 161 1e-059
ref|NM_129949.1| Arabidopsis thaliana polygalacturonase AT2... 161 1e-059
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 230 8e-059
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 213 2e-058
ref|NM_123852.1| Arabidopsis thaliana polygalacturonase AT5... 164 9e-058
emb|BX813651.1|CNS0AEBF Arabidopsis thaliana Full-length cD... 149 9e-057
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 222 3e-056
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 222 3e-056
ref|NM_122635.2| Arabidopsis thaliana polygalacturonase AT5... 149 3e-056
emb|BX813953.1|CNS0AEHM Arabidopsis thaliana Full-length cD... 148 1e-055
emb|BX825672.1|CNS0A7UV Arabidopsis thaliana Full-length cD... 131 6e-054
ref|NM_104742.3| Arabidopsis thaliana polygalacturonase AT1... 146 7e-054
gb|AY060568.1| Arabidopsis thaliana At1g60590/F8A5_12 mRNA,... 146 7e-054
gb|BT000611.1| Arabidopsis thaliana putative polygalacturon... 146 7e-054
ref|NM_123851.1| Arabidopsis thaliana polygalacturonase AT5... 160 9e-054
ref|NM_119732.2| Arabidopsis thaliana polygalacturonase AT4... 158 2e-053
ref|NM_121726.1| Arabidopsis thaliana polygalacturonase AT5... 137 2e-053
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 211 4e-053
dbj|AK117620.1| Arabidopsis thaliana At3g26610 mRNA for put... 143 3e-052
ref|NM_113570.2| Arabidopsis thaliana polygalacturonase AT3... 143 3e-052
emb|BX824469.1|CNS0A6Z5 Arabidopsis thaliana Full-length cD... 144 5e-052
emb|BX821033.1|CNS0AACW Arabidopsis thaliana Full-length cD... 103 8e-052
emb|BX815901.1|CNS0AEH8 Arabidopsis thaliana Full-length cD... 92 2e-051
ref|NM_148391.1| Arabidopsis thaliana polygalacturonase AT4... 178 2e-051
gb|BT005780.1| Arabidopsis thaliana clone RAFL14-98-K19 (R2... 147 7e-050
gb|AC001229.1|F5I14 Sequence of BAC F5I14 from Arabidopsis ... 161 1e-049
emb|BX814728.1|CNS0AAT1 Arabidopsis thaliana Full-length cD... 146 1e-049
ref|NM_121469.3| Arabidopsis thaliana polygalacturonase AT5... 147 1e-049
emb|BX831614.1|CNS09YP6 Arabidopsis thaliana Full-length cD... 147 1e-049
gb|AC002333.3| Arabidopsis thaliana chromosome 2 clone F18O... 121 6e-049
gb|AC007153.2| Arabidopsis thaliana chromosome I BAC F3F20 ... 110 1e-048
ref|NM_123354.1| Arabidopsis thaliana polygalacturonase AT5... 165 1e-048
ref|NM_104548.2| Arabidopsis thaliana polygalacturonase AT1... 150 2e-048
emb|BX816284.1|CNS0AD4M Arabidopsis thaliana Full-length cD... 150 2e-048
emb|AL772721.1| Arabidopsis thaliana transposon insertion S... 196 2e-048
gb|AF037367.1| Arabidopsis thaliana endo-polygalacturonase ... 74 9e-048
emb|BX814380.1|CNS0AC2P Arabidopsis thaliana Full-length cD... 143 1e-047
gb|BX836604.1|BX836604 BX836604 Arabidopsis thaliana Flower... 98 1e-047
ref|NM_103706.2| Arabidopsis thaliana polygalacturonase AT1... 142 2e-047
gb|AF410319.1|AF410319 Arabidopsis thaliana At1g48100/F21D1... 142 2e-047
gb|AY050798.1| Arabidopsis thaliana putative polygalacturon... 142 2e-047
gb|AY096360.1| Arabidopsis thaliana putative polygalacturon... 142 2e-047
emb|AJ002532.1|ATAJ2532 Arabidopsis thaliana ADPG1 gene 74 4e-047
emb|X97828.1|ATORF06 A.thaliana mRNA (orf06) from chromosom... 143 2e-046
emb|AL138647.1|ATF24G16 Arabidopsis thaliana DNA chromosome... 123 4e-045
emb|BX816708.1|CNS0AD6H Arabidopsis thaliana Full-length cD... 138 7e-045
ref|NM_119390.2| Arabidopsis thaliana polygalacturonase AT4... 134 1e-043
gb|AI994651.1|AI994651 701499138 A. thaliana, Ohio State cl... 121 3e-043
emb|AX461137.1| Sequence 66 from Patent WO0198480 67 2e-041
emb|AX461255.1| Sequence 184 from Patent WO0198480 67 2e-041
gb|AY039852.1| Arabidopsis thaliana At1g10640/F20B24_8 mRNA... 148 5e-041
gb|AC009322.1|AC009322 Arabidopsis thaliana chromosome I BA... 63 5e-041
ref|NM_100940.3| Arabidopsis thaliana polygalacturonase AT1... 148 5e-041
gb|AY143959.1| Arabidopsis thaliana At1g10640/F20B24_8 mRNA... 148 8e-039
emb|CQ805350.1| Sequence 1761 from Patent WO2004035798 148 8e-039
gb|AC002339.3| Arabidopsis thaliana chromosome 2 clone T11A... 67 1e-038
ref|NM_116419.2| Arabidopsis thaliana polygalacturonase AT4... 97 4e-038
emb|AL133248.1|ATT8H10 Arabidopsis thaliana DNA chromosome ... 74 6e-038
gb|AQ010492.1|AQ010492 F23M1TFB IGF Arabidopsis thaliana ge... 128 1e-036
gb|BT023462.1| Arabidopsis thaliana At1g02460 gene, complet... 97 1e-035
ref|NM_100127.2| Arabidopsis thaliana polygalacturonase AT1... 97 1e-035
dbj|AB010077.1| Arabidopsis thaliana genomic DNA, chromosom... 67 4e-035
gb|AC002292.1|AC002292 Arabidopsis thaliana BAC F8A5, compl... 76 1e-034
ref|NM_106663.1| Arabidopsis thaliana polygalacturonase AT1... 134 1e-033
dbj|AB017071.1| Arabidopsis thaliana genomic DNA, chromosom... 68 2e-033
emb|AL089539.1|CNS00TD1 Arabidopsis thaliana genome survey ... 92 3e-033
dbj|AB005238.1| Arabidopsis thaliana genomic DNA, chromosom... 91 9e-033
gb|AI995224.1|AI995224 701502760 A. thaliana, Ohio State cl... 140 1e-031
gb|AC002342.1|ATAC002342 Arabidopsis thaliana chromosome V ... 76 1e-031
emb|AL034567.1|ATF8B4 Arabidopsis thaliana DNA chromosome 4... 66 2e-031
dbj|AB010693.1| Arabidopsis thaliana genomic DNA, chromosom... 76 6e-031
gb|AV782140.1|AV782140 AV782140 RAFL4 Arabidopsis thaliana ... 87 3e-030
gb|AC007123.1|AC007123 Arabidopsis thaliana BAC F21A20 from... 66 3e-030
gb|AC007478.1|AC007478 Arabidopsis thaliana BAC F15A18 from... 66 3e-030
emb|AL163792.1|ATT15N1 Arabidopsis thaliana DNA chromosome ... 84 6e-030
gb|B28793.1|B28793 T19O12TR TAMU Arabidopsis thaliana genom... 92 6e-030
emb|AL161581.2|ATCHRIV77 Arabidopsis thaliana DNA chromosom... 66 7e-030
dbj|AB016874.1| Arabidopsis thaliana genomic DNA, chromosom... 72 1e-029
gb|AC009398.6|AC009398 Genomic sequence for Arabidopsis tha... 79 1e-029
emb|AL031135.1|ATF8D20 Arabidopsis thaliana DNA chromosome ... 66 4e-029
ref|NM_119389.2| Arabidopsis thaliana polygalacturonase AT4... 69 5e-029
gb|AQ964056.1|AQ964056 LERGU38TF LERG Arabidopsis thaliana ... 99 5e-029
gb|AQ964057.1|AQ964057 LERGU38TR LERG Arabidopsis thaliana ... 99 5e-029
gb|AQ961164.1|AQ961164 LERFJ55TF LERA Arabidopsis thaliana ... 54 6e-029
gb|AW004489.1|AW004489 701931827 A. thaliana, mixed source ... 121 6e-029
emb|X98130.1|AT81KBGEN Arabidopsis thaliana 81kb genomic se... 64 8e-029
dbj|AB028611.1| Arabidopsis thaliana genomic DNA, chromosom... 64 9e-029
emb|BX813497.1|CNS0ADHO Arabidopsis thaliana Full-length cD... 99 4e-028
emb|AL161587.2|ATCHRIV83 Arabidopsis thaliana DNA chromosom... 66 7e-028
gb|AC010796.7|AC010796 Arabidopsis thaliana chromosome 1 BA... 72 8e-028
gb|R29820.1|R29820 12425 Lambda-PRL2 Arabidopsis thaliana c... 127 9e-028
emb|AL091488.1|CNS00UV6 Arabidopsis thaliana genome survey ... 76 2e-027
gb|AC009323.4|AC009323 Arabidopsis thaliana chromosome I BA... 74 3e-027
gb|AV532721.1|AV532721 AV532721 Arabidopsis thaliana flower... 125 4e-027
emb|AJ552539.1|ATH552539 Arabidopsis thaliana T-DNA flankin... 74 5e-027
gb|BP815552.1|BP815552 BP815552 RAFL19 Arabidopsis thaliana... 124 8e-027
gb|BH792479.1|BH792479 SALK_064312.54.50.x Arabidopsis thal... 123 2e-026
gb|BZ666496.1|BZ666496 SGT6366-3-3 Arabidopsis thaliana Ds ... 123 2e-026
emb|CR357101.1| Arabidopsis thaliana T-DNA flanking sequenc... 123 2e-026
gb|AC005990.1|F5O8 Arabidopsis thaliana chromosome 1 BAC F5... 70 2e-026
gb|AC007945.3|AC007945 Genomic sequence for Arabidopsis tha... 70 2e-026
gb|AI993509.1|AI993509 701496530 A. thaliana, Ohio State cl... 79 2e-026
gb|AV829226.1|AV829226 AV829226 RAFL9 Arabidopsis thaliana ... 122 4e-026
gb|B09328.1|B09328 F2P23-T7 IGF Arabidopsis thaliana genomi... 73 5e-026
gb|CD531316.1|CD531316 10F09 Arabidopsis Leaf Senescence Li... 95 1e-024
gb|B09753.1|B09753 F24F5-Sp6 IGF Arabidopsis thaliana genom... 116 2e-024
gb|B29424.1|B29424 F18O19TRE IGF Arabidopsis thaliana genom... 116 2e-024
gb|AC023673.3|AC023673 Genomic sequence for Arabidopsis tha... 67 2e-024
gb|BH613065.1|BH613065 SALK_033719 Arabidopsis thaliana TDN... 116 3e-024
gb|BH613074.1|BH613074 SALK_033729 Arabidopsis thaliana TDN... 116 3e-024
emb|BX322204.1| Arabidopsis thaliana transposon insertion S... 73 5e-024
gb|B09652.1|B09652 T25H4-T7 TAMU Arabidopsis thaliana genom... 49 1e-023
gb|B12788.1|B12788 F7K19-T7 IGF Arabidopsis thaliana genomi... 70 1e-023
gb|BP815506.1|BP815506 BP815506 RAFL19 Arabidopsis thaliana... 88 2e-023
gb|B26350.1|B26350 F24F5TR IGF Arabidopsis thaliana genomic... 112 2e-023
gb|CL504361.1|CL504361 SAIL_736_A05.v1 SAIL Collection Arab... 68 5e-023
emb|BX894310.1| Arabidopsis thaliana T-DNA flanking sequenc... 85 9e-023
gb|AV535049.1|AV535049 AV535049 Arabidopsis thaliana flower... 109 3e-022
gb|AV822112.1|AV822112 AV822112 RAFL5 Arabidopsis thaliana ... 95 6e-022
gb|CD533820.1|CD533820 33P11 Arabidopsis Leaf Senescence Li... 57 9e-021
>gb|AY065239.1| Arabidopsis thaliana putative polygalacturonase(PGA3 (At3g07820)
mRNA, complete cds
Length = 1401
Score = 381 bits (826), Expect = e-104
Identities = 151/354 (42%), Positives = 219/354 (61%)
Frame = -3 / +2
Query: 1330 SDSTPMILKAWKNACEATGVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNLLGTGDLS 1151
SD T +LKA+ +AC+++ K+VIP G + G +E++GPCK+ I + L G + G+
Sbjct: 164 SDITQALLKAFTSACQSSSPSKVVIPKGEFKLGEIEMRGPCKAPIEVTLQGTVKADGNAI 343
Query: 1150 AYQRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILPNSLVLDFVTNVQIR 971
+ W+ N++ +NG G DG+G W N C ++ CK LP S+ DF+ N +IR
Sbjct: 344 QGKEKWVVFGNIDGFKLNGGGAFDGEGNAAWRVNNCHKTFECKKLPISIRFDFILNSEIR 523
Query: 970 GITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVGDDC 791
I+ +++K FH+N+ KN+ ++ + + AP DSPNTDGIH+G S V I ++ I GDDC
Sbjct: 524 DISSIDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGVKILNSFISTGDDC 703
Query: 790 ISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYE 611
IS+G G K + + V CGPGHGISVGSLGRY E+DV ++V CT+ T NGLRIK++
Sbjct: 704 ISVGDGMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTLQETDNGLRIKTWP 883
Query: 610 DSKSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSN 431
+ S AS +E I + +VS PI+IDQ+YCP N C K AS + + ++ FKNI GTS
Sbjct: 884 SAACSTTASDIHFEDIILKDVSNPILIDQEYCPWNQCNKQKASTIKLVNISFKNIRGTSG 1063
Query: 430 TPEAITLNCANNLPCQGVQLVNVDIKYNGSGNKTMAVCKNAIGKSIGLAKELAC 269
+A+ L C+ PCQ V++ ++DIKYNG+ C N K +G AC
Sbjct: 1064 NKDAVKLLCSKGYPCQNVEIGDIDIKYNGADGPATFHCSNVSPKILGSQSPKAC 1225
>gb|AY096534.1| Arabidopsis thaliana putative polygalacturonase (PGA3) (At3g07820)
mRNA, complete cds
Length = 1207
Score = 381 bits (826), Expect = e-104
Identities = 151/354 (42%), Positives = 219/354 (61%)
Frame = -3 / +1
Query: 1330 SDSTPMILKAWKNACEATGVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNLLGTGDLS 1151
SD T +LKA+ +AC+++ K+VIP G + G +E++GPCK+ I + L G + G+
Sbjct: 97 SDITQALLKAFTSACQSSSPSKVVIPKGEFKLGEIEMRGPCKAPIEVTLQGTVKADGNAI 276
Query: 1150 AYQRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILPNSLVLDFVTNVQIR 971
+ W+ N++ +NG G DG+G W N C ++ CK LP S+ DF+ N +IR
Sbjct: 277 QGKEKWVVFGNIDGFKLNGGGAFDGEGNAAWRVNNCHKTFECKKLPISIRFDFILNSEIR 456
Query: 970 GITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVGDDC 791
I+ +++K FH+N+ KN+ ++ + + AP DSPNTDGIH+G S V I ++ I GDDC
Sbjct: 457 DISSIDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGVKILNSFISTGDDC 636
Query: 790 ISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYE 611
IS+G G K + + V CGPGHGISVGSLGRY E+DV ++V CT+ T NGLRIK++
Sbjct: 637 ISVGDGMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTLQETDNGLRIKTWP 816
Query: 610 DSKSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSN 431
+ S AS +E I + +VS PI+IDQ+YCP N C K AS + + ++ FKNI GTS
Sbjct: 817 SAACSTTASDIHFEDIILKDVSNPILIDQEYCPWNQCNKQKASTIKLVNISFKNIRGTSG 996
Query: 430 TPEAITLNCANNLPCQGVQLVNVDIKYNGSGNKTMAVCKNAIGKSIGLAKELAC 269
+A+ L C+ PCQ V++ ++DIKYNG+ C N K +G AC
Sbjct: 997 NKDAVKLLCSKGYPCQNVEIGDIDIKYNGADGPATFHCSNVSPKILGSQSPKAC 1158
>gb|AY087578.1| Arabidopsis thaliana clone 36765 mRNA, complete sequence
Length = 1385
Score = 381 bits (826), Expect = e-104
Identities = 151/354 (42%), Positives = 219/354 (61%)
Frame = -3 / +2
Query: 1330 SDSTPMILKAWKNACEATGVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNLLGTGDLS 1151
SD T +LKA+ +AC+++ K+VIP G + G +E++GPCK+ I + L G + G+
Sbjct: 164 SDITQALLKAFTSACQSSSPSKVVIPKGEFKLGEIEMRGPCKAPIEVTLQGTVKADGNAI 343
Query: 1150 AYQRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILPNSLVLDFVTNVQIR 971
+ W+ N++ +NG G DG+G W N C ++ CK LP S+ DF+ N +IR
Sbjct: 344 QGKEKWVVFGNIDGFKLNGGGAFDGEGNAAWRVNNCHKTFECKKLPISIRFDFILNSEIR 523
Query: 970 GITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVGDDC 791
I+ +++K FH+N+ KN+ ++ + + AP DSPNTDGIH+G S V I ++ I GDDC
Sbjct: 524 DISSIDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGVKILNSFISTGDDC 703
Query: 790 ISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYE 611
IS+G G K + + V CGPGHGISVGSLGRY E+DV ++V CT+ T NGLRIK++
Sbjct: 704 ISVGDGMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTLQETDNGLRIKTWP 883
Query: 610 DSKSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSN 431
+ S AS +E I + +VS PI+IDQ+YCP N C K AS + + ++ FKNI GTS
Sbjct: 884 SAACSTTASDIHFEDIILKDVSNPILIDQEYCPWNQCNKQKASTIKLVNISFKNIRGTSG 1063
Query: 430 TPEAITLNCANNLPCQGVQLVNVDIKYNGSGNKTMAVCKNAIGKSIGLAKELAC 269
+A+ L C+ PCQ V++ ++DIKYNG+ C N K +G AC
Sbjct: 1064 NKDAVKLLCSKGYPCQNVEIGDIDIKYNGADGPATFHCSNVSPKILGSQSPKAC 1225
>ref|NM_111661.2| Arabidopsis thaliana polygalacturonase AT3G07820 mRNA, complete cds
Length = 1400
Score = 381 bits (826), Expect = e-104
Identities = 151/354 (42%), Positives = 219/354 (61%)
Frame = -3 / +2
Query: 1330 SDSTPMILKAWKNACEATGVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNLLGTGDLS 1151
SD T +LKA+ +AC+++ K+VIP G + G +E++GPCK+ I + L G + G+
Sbjct: 164 SDITQALLKAFTSACQSSSPSKVVIPKGEFKLGEIEMRGPCKAPIEVTLQGTVKADGNAI 343
Query: 1150 AYQRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILPNSLVLDFVTNVQIR 971
+ W+ N++ +NG G DG+G W N C ++ CK LP S+ DF+ N +IR
Sbjct: 344 QGKEKWVVFGNIDGFKLNGGGAFDGEGNAAWRVNNCHKTFECKKLPISIRFDFILNSEIR 523
Query: 970 GITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVGDDC 791
I+ +++K FH+N+ KN+ ++ + + AP DSPNTDGIH+G S V I ++ I GDDC
Sbjct: 524 DISSIDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGVKILNSFISTGDDC 703
Query: 790 ISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYE 611
IS+G G K + + V CGPGHGISVGSLGRY E+DV ++V CT+ T NGLRIK++
Sbjct: 704 ISVGDGMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTLQETDNGLRIKTWP 883
Query: 610 DSKSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSN 431
+ S AS +E I + +VS PI+IDQ+YCP N C K AS + + ++ FKNI GTS
Sbjct: 884 SAACSTTASDIHFEDIILKDVSNPILIDQEYCPWNQCNKQKASTIKLVNISFKNIRGTSG 1063
Query: 430 TPEAITLNCANNLPCQGVQLVNVDIKYNGSGNKTMAVCKNAIGKSIGLAKELAC 269
+A+ L C+ PCQ V++ ++DIKYNG+ C N K +G AC
Sbjct: 1064 NKDAVKLLCSKGYPCQNVEIGDIDIKYNGADGPATFHCSNVSPKILGSQSPKAC 1225
>emb|AJ005584.1|ATH005584 Arabidopsis thaliana mRNA for polygalacturonase
Length = 1350
Score = 380 bits (825), Expect = e-104
Identities = 150/354 (42%), Positives = 219/354 (61%)
Frame = -3 / +2
Query: 1330 SDSTPMILKAWKNACEATGVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNLLGTGDLS 1151
SD T +LKA+ +AC+++ K+VIP G + G +E++GPCK+ I + L G + G+
Sbjct: 122 SDITQALLKAFTSACQSSSPSKVVIPKGEFKLGEIEMRGPCKAPIEVTLQGTVKADGNAI 301
Query: 1150 AYQRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILPNSLVLDFVTNVQIR 971
+ W+ N++ +NG G DG+G W N C ++ CK LP S+ DF+ N +IR
Sbjct: 302 QGKEKWVVFGNIDGFKLNGGGAFDGEGNAAWRVNNCHKTFECKKLPISIRFDFILNSEIR 481
Query: 970 GITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVGDDC 791
I+ +++K FH+N+ KN+ ++ + + AP DSPNTDGIH+G S + I ++ I GDDC
Sbjct: 482 DISSIDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGIKILNSFISTGDDC 661
Query: 790 ISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYE 611
IS+G G K + + V CGPGHGISVGSLGRY E+DV ++V CT+ T NGLRIK++
Sbjct: 662 ISVGDGMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTLQETDNGLRIKTWP 841
Query: 610 DSKSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSN 431
+ S AS +E I + +VS PI+IDQ+YCP N C K AS + + ++ FKNI GTS
Sbjct: 842 SAACSTTASDIHFEDIILKDVSNPILIDQEYCPWNQCNKQKASTIKLVNISFKNIRGTSG 1021
Query: 430 TPEAITLNCANNLPCQGVQLVNVDIKYNGSGNKTMAVCKNAIGKSIGLAKELAC 269
+A+ L C+ PCQ V++ ++DIKYNG+ C N K +G AC
Sbjct: 1022 NKDAVKLLCSKGYPCQNVEIGDIDIKYNGADGPATFHCSNVSPKILGSQSPKAC 1183
>emb|BX823174.1|CNS0A74O Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB95ZD09 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1329
Score = 378 bits (819), Expect = e-103
Identities = 150/354 (42%), Positives = 217/354 (61%)
Frame = -3 / +2
Query: 1330 SDSTPMILKAWKNACEATGVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNLLGTGDLS 1151
SD T +LKA+ +AC+++ K+VIP G + G +E++GPCK+ I + L G + G+
Sbjct: 149 SDITQALLKAFTSACQSSSPSKVVIPKGEFKLGEIEMRGPCKAPIEVTLQGTVKADGNAI 328
Query: 1150 AYQRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILPNSLVLDFVTNVQIR 971
+ W+ N+ +NG G DG+G W N C ++ CK LP S+ DF+ N +IR
Sbjct: 329 QGKEKWVVFGNINGFKLNGGGAFDGEGNAAWRVNNCHKTFECKKLPISIRFDFILNSEIR 508
Query: 970 GITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVGDDC 791
I+ +++K FH+N+ KN+ ++ + + AP DSPNTDGIH+G S V I ++ I GDDC
Sbjct: 509 DISSIDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGVKILNSFISTGDDC 688
Query: 790 ISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYE 611
IS+G G K + + V CGPGHGISVGSLGRY E+DV ++V CT+ T NGLRIK++
Sbjct: 689 ISVGDGMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTLQETDNGLRIKTWP 868
Query: 610 DSKSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSN 431
+ S AS +E I + +VS PI+IDQ+YCP N C K AS + + ++ FKNI GT
Sbjct: 869 SAACSTTASDIHFEDIILKDVSNPILIDQEYCPWNQCNKQKASTIKLVNISFKNIRGTPG 1048
Query: 430 TPEAITLNCANNLPCQGVQLVNVDIKYNGSGNKTMAVCKNAIGKSIGLAKELAC 269
+A+ L C+ PCQ V++ ++DIKYNG+ C N K +G AC
Sbjct: 1049 NKDAVKLLCSKGYPCQNVEIGDIDIKYNGADGPATFHCSNVSPKILGSQSPKAC 1210
>ref|NM_111663.2| Arabidopsis thaliana polygalacturonase AT3G07840 mRNA, complete cds
Length = 1296
Score = 374 bits (812), Expect = e-102
Identities = 152/358 (42%), Positives = 212/358 (59%)
Frame = -3 / +1
Query: 1342 GDGKSDSTPMILKAWKNACEATGVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNLLGT 1163
G SD T +LKA+ +AC+A K+VI G + G +E+ GPCK+ + I L G L
Sbjct: 178 GSPGSDITQALLKAFTSACQAPTASKVVITKGEFKLGEIEMTGPCKAPVEINLQGTLKAD 357
Query: 1162 GDLSAYQRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILPNSLVLDFVTN 983
G + W+ + +NG G DG+G W N C ++ CK LP S+ DFV N
Sbjct: 358 GKAIQGKERWVVFLRINGFKLNGGGIFDGEGNAAWRVNNCHKTFECKKLPISIRFDFVEN 537
Query: 982 VQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGV 803
+IR I+ +++K FH+N+ KN+ D V V AP +SPNTDGIH+G S V I ++ I
Sbjct: 538 AEIRDISSIDAKNFHINVLGAKNMTFDNVKVIAPAESPNTDGIHLGRSEGVKILNSKIAT 717
Query: 802 GDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRI 623
GDDCIS+G G K + + V CGPGHGISVGSLGRY E+DV + V CT+ GT NGLRI
Sbjct: 718 GDDCISVGDGMKNLHVENVMCGPGHGISVGSLGRYVHEQDVTGITVVNCTLQGTDNGLRI 897
Query: 622 KSYEDSKSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIH 443
K++ + + AS +E I ++NVS PI+IDQ+YCP N C K S + + D+ FKNI
Sbjct: 898 KTWPSAACATTASGIHFENIILNNVSNPILIDQEYCPWNQCNKQKPSTIKLVDISFKNIR 1077
Query: 442 GTSNTPEAITLNCANNLPCQGVQLVNVDIKYNGSGNKTMAVCKNAIGKSIGLAKELAC 269
GTS +A+ L C+ PC V++ N++++Y G+ +C N K +G AC
Sbjct: 1078 GTSGNKDAVKLLCSKAHPCANVEIGNINLEYKGADGPPTFMCSNVSPKLVGTQNPKAC 1251
>ref|NM_111662.2| Arabidopsis thaliana polygalacturonase AT3G07830 mRNA, complete cds
Length = 1460
Score = 369 bits (799), Expect = e-100
Identities = 147/354 (41%), Positives = 217/354 (61%)
Frame = -3 / +2
Query: 1330 SDSTPMILKAWKNACEATGVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNLLGTGDLS 1151
SD T +L+A+ AC++ +K+VIP G + G + + GPCKS + I L G +L G+
Sbjct: 155 SDITQALLRAFTTACQSPTPRKVVIPKGQFKLGEIMMSGPCKSPVEITLLGTVLADGNSI 334
Query: 1150 AYQRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILPNSLVLDFVTNVQIR 971
+ W+ + ++ +NG GT DG+G W N C ++ CK LP S+ DFVTN +IR
Sbjct: 335 HGKEKWVVFQRMDGFRLNGGGTFDGEGNAAWRVNNCHKTFECKKLPISIRFDFVTNAEIR 514
Query: 970 GITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVGDDC 791
I+ +++K FH+N+ KN+ D V + AP +SPNTDGIH+G S V+I ++ I GDDC
Sbjct: 515 DISSIDAKNFHINVIGAKNMTFDNVKIMAPAESPNTDGIHLGRSVGVSIINSRISTGDDC 694
Query: 790 ISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYE 611
+S+G G + + V CGPGHGISVGSLGRY E+DV ++V CT+ T NGLRIK++
Sbjct: 695 VSVGDGMVNLLVKNVVCGPGHGISVGSLGRYGHEQDVSGIRVINCTLQETDNGLRIKTWP 874
Query: 610 DSKSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSN 431
+ S AS +E I + NVS PI+IDQ+YCP N C K +S + + ++ F+ I GTS
Sbjct: 875 SAACSTTASNIHFENIILRNVSNPILIDQEYCPWNQCNKQKSSSIKLANISFRRIRGTSG 1054
Query: 430 TPEAITLNCANNLPCQGVQLVNVDIKYNGSGNKTMAVCKNAIGKSIGLAKELAC 269
+A+ L C+ PC+ VQ+ +++I+Y G+ +C N K +G AC
Sbjct: 1055 NKDAVKLLCSKGYPCENVQVGDINIQYTGADGPATFMCSNVRPKLVGTQFPKAC 1216
>ref|NM_106487.2| Arabidopsis thaliana polygalacturonase AT1G78400 mRNA, complete cds
Length = 1215
Score = 298 bits (645), Expect(2) = 7e-097
Identities = 126/293 (43%), Positives = 179/293 (61%)
Frame = -3 / +1
Query: 1144 QRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILPNSLVLDFVTNVQIRGI 965
Q +WI V+ L+++G G +DGQG+ W N C+ ++NC+ LP ++ FV ++ I
Sbjct: 331 QDSWIIFRYVDYLTVSGGGILDGQGSYSWPLNNCRQTHNCRALPMNMGFQFVRFSRLTRI 510
Query: 964 TLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVGDDCIS 785
+NSK HLN F ++ I +V +KAPGDSPNTDGI IG S+++ I I GDDCI+
Sbjct: 511 KSINSKMGHLNFFSVQHFDITRVNIKAPGDSPNTDGIKIGSSNHMKIHHVDIATGDDCIA 690
Query: 784 IGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDS 605
I G+ + I+ V CGPGHGISVGSLG++K EK V+ + V GT+NG+RIK++
Sbjct: 691 ILSGTFNLDINKVNCGPGHGISVGSLGKFKGEKSVQGLIVRNSIFNGTSNGVRIKTWPSP 870
Query: 604 KSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTP 425
S FL++ + M +V PI IDQ+YCPN C SK+ + DV F+NI GTS
Sbjct: 871 GEPNLVSNFLFKNLQMIDVQSPINIDQRYCPNPPCSFQSFSKIQIRDVKFQNIWGTSTAK 1050
Query: 424 EAITLNCANNLPCQGVQLVNVDIKYNGSGNKTMAVCKNAIGKSIGLAKELACI 266
EA+ L C+ N+PC+ VQL N++I + G +VC+N G G +CI
Sbjct: 1051 EAVKLQCSKNVPCKNVQLFNINIVHRGRDGPATSVCENVGGWIGGKISPPSCI 1209
Score = 79.9 bits (168), Expect(2) = 7e-097
Identities = 31/77 (40%), Positives = 47/77 (61%)
Frame = -3 / +1
Query: 1366 DIAQLGAKGDGKSDSTPMILKAWKNACEATGVQKIVIPPGNYLTGGLELKGPCKSSIIIR 1187
D+ GA+GDGK+D+T KAWK+AC+ G+ ++ IP G + G + GPCKS I
Sbjct: 106 DVRSYGARGDGKTDNTMAFTKAWKDACQWKGLPRVYIPFGTFYLGAVAFTGPCKSRISFI 285
Query: 1186 LDGNLLGTGDLSAYQRN 1136
+ G LL D +A +++
Sbjct: 286 IKGTLLAPKDPNAIKQD 336
>emb|BX822574.1|CNS0A73L Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB4ZD01 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1339
Score = 355 bits (770), Expect = 2e-096
Identities = 144/347 (41%), Positives = 211/347 (60%)
Frame = -3 / +3
Query: 1330 SDSTPMILKAWKNACEATGVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNLLGTGDLS 1151
SD T +L+A+ AC++ +K+VIP G + G + + GPCKS + I L G +L G+
Sbjct: 165 SDITQALLRAFTTACQSPTPRKVVIPKGQFKLGEIMMSGPCKSPVEITLLGTVLADGNSI 344
Query: 1150 AYQRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILPNSLVLDFVTNVQIR 971
+ W+ + ++ +NG GT DG+G W N C ++ CK LP S+ DFVTN +IR
Sbjct: 345 HGKEKWVVFQRMDGFRLNGGGTFDGEGNAAWRVNNCHKTFECKKLPISIRFDFVTNAEIR 524
Query: 970 GITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVGDDC 791
I+ +++K FH+N+ KN+ D V + AP +SPNTDGIH+G S V+I ++ I GDDC
Sbjct: 525 DISSIDAKNFHINVIGAKNMTFDNVKIMAPAESPNTDGIHLGRSVGVSIINSRISTGDDC 704
Query: 790 ISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYE 611
+S+G G + + V CGPGHGISVGSLGRY E+DV ++V CT T NGLRIK++
Sbjct: 705 VSVGDGMVNLLVKNVVCGPGHGISVGSLGRYGHEQDVSGIRVINCTPQETDNGLRIKTWP 884
Query: 610 DSKSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSN 431
+ S AS +E I + NVS PI+IDQ+YCP N C K +S + + D+ F+ I GTS
Sbjct: 885 SAACSTTASNIHFENIILRNVSNPILIDQEYCPWNQCYKQKSSSIKLADICFRRIRGTSG 1064
Query: 430 TPEAITLNCANNLPCQGVQLVNVDIKYNGSGNKTMAVCKNAIGKSIG 290
+A+ L C PC+ VQ+ +++I+ G+ + N K +G
Sbjct: 1065 KKDAVKLLCGKGYPCENVQVGDINIQ*IGADGPATFMWSNVRPKLVG 1205
>dbj|AK118684.1| Arabidopsis thaliana At5g48140 mRNA for putative polygalacturonase,
complete cds, clone: RAFL19-95-F20
Length = 1466
Score = 322 bits (698), Expect(2) = 1e-095
Identities = 125/292 (42%), Positives = 179/292 (61%)
Frame = -3 / +1
Query: 1144 QRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILPNSLVLDFVTNVQIRGI 965
+ W+ N+ +NG G DG+G W N C ++NCK LP S+ DFVT+ +IRGI
Sbjct: 397 KEKWVAFRNINGFKLNGGGVFDGEGNAAWRVNNCHKTFNCKKLPISIRFDFVTDAKIRGI 576
Query: 964 TLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVGDDCIS 785
T L++K FH+N+ KNV + V + AP +SPNTDGIH+G S + I ++ I GDDC+S
Sbjct: 577 TSLDAKHFHINVIGAKNVTFEDVKIIAPAESPNTDGIHVGRSDGIKIINSFISTGDDCVS 756
Query: 784 IGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDS 605
+G G K + + V CGPGHGIS+GSLGRY E++V +++ CT+ T NGLRIK++ +
Sbjct: 757 VGDGMKNLLVERVTCGPGHGISIGSLGRYSHEENVSGIKIINCTLQETDNGLRIKTWPSA 936
Query: 604 KSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTP 425
+ AS +E I + NVS PI+IDQ+YCP N C K S + + ++ FK I GTS
Sbjct: 937 ACTTTASDIHFENILLKNVSNPILIDQEYCPWNQCNKQKPSTIKLANISFKKIRGTSGNK 1116
Query: 424 EAITLNCANNLPCQGVQLVNVDIKYNGSGNKTMAVCKNAIGKSIGLAKELAC 269
+A+ L C+ PCQ V++ +V+I+Y G+ C N K +G AC
Sbjct: 1117 DAVKLLCSKGYPCQNVEVGDVNIQYTGADGPATFQCSNVSPKLVGTQIPKAC 1272
Score = 79.4 bits (167), Expect(3) = 6e-023
Identities = 38/84 (45%), Positives = 43/84 (51%)
Frame = +3 / -1
Query: 846 PMWMPSVLGLSPGALTVTLSISTFLHSKMLRWKNLLLSSVMPRIWTFVTKSSTKLFGRIL 1025
P W+PSVLGLS GA+ +T S TF L WK VMP I+ VTKS+ L G L
Sbjct: 695 PTWIPSVLGLSAGAMILTSSNVTFFAPMTLMWKCFASKEVMPLIFASVTKSNLMLMGSFL 516
Query: 1026 QL*ECWHWFLLHTRAPCPSMVPWP 1097
QL W L P PS P P
Sbjct: 515 QLKVLWQLLTLQAAFPSPSKTPPP 444
Score = 51.5 bits (106), Expect(2) = 1e-095
Identities = 22/64 (34%), Positives = 35/64 (54%)
Frame = -3 / +1
Query: 1330 SDSTPMILKAWKNACEATGVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNLLGTGDLS 1151
SD T +LKA+ AC+ ++IP G Y G + + GPCK+ I I L G + G+ +
Sbjct: 214 SDITNALLKAFNEACQFPTKSTVMIPKGEYKLGEIVMMGPCKAPIRIALLGTVKADGNAN 393
Query: 1150 AYQR 1139
++
Sbjct: 394 GKEK 405
Score = 43.2 bits (88), Expect(3) = 6e-023
Identities = 25/66 (37%), Positives = 31/66 (46%)
Frame = +3 / -1
Query: 345 PLYLMSTLTSCTPWHGRLLAQLSVMASGVLEVPWMFLKTTSLTATLEAPDLTQMLLGQYF 524
P+Y M T + T HG L S AS +VP +FLK ++ L GQY
Sbjct: 1196 PVYWMFTSPTSTF*HGYPLLHKSFTASLFPDVPLIFLKLMLANLIVDGFCLLHWFHGQYS 1017
Query: 525 WSMMMG 542
WSM MG
Sbjct: 1016 WSMRMG 999
Score = 33.6 bits (67), Expect(3) = 6e-023
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3 / -1
Query: 723 MPWPGPHLTPWMRIILLPGPMEMQSS 800
+P PGPH+T R +P P E QSS
Sbjct: 818 IPCPGPHVTLSTRRFFIPSPTETQSS 741
>ref|NM_124188.2| Arabidopsis thaliana polygalacturonase AT5G48140 mRNA, complete cds
Length = 1439
Score = 322 bits (698), Expect(2) = 1e-095
Identities = 125/292 (42%), Positives = 179/292 (61%)
Frame = -3 / +1
Query: 1144 QRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILPNSLVLDFVTNVQIRGI 965
+ W+ N+ +NG G DG+G W N C ++NCK LP S+ DFVT+ +IRGI
Sbjct: 397 KEKWVAFRNINGFKLNGGGVFDGEGNAAWRVNNCHKTFNCKKLPISIRFDFVTDAKIRGI 576
Query: 964 TLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVGDDCIS 785
T L++K FH+N+ KNV + V + AP +SPNTDGIH+G S + I ++ I GDDC+S
Sbjct: 577 TSLDAKHFHINVIGAKNVTFEDVKIIAPAESPNTDGIHVGRSDGIKIINSFISTGDDCVS 756
Query: 784 IGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDS 605
+G G K + + V CGPGHGIS+GSLGRY E++V +++ CT+ T NGLRIK++ +
Sbjct: 757 VGDGMKNLLVERVTCGPGHGISIGSLGRYSHEENVSGIKIINCTLQETDNGLRIKTWPSA 936
Query: 604 KSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTP 425
+ AS +E I + NVS PI+IDQ+YCP N C K S + + ++ FK I GTS
Sbjct: 937 ACTTTASDIHFENILLKNVSNPILIDQEYCPWNQCNKQKPSTIKLANISFKKIRGTSGNK 1116
Query: 424 EAITLNCANNLPCQGVQLVNVDIKYNGSGNKTMAVCKNAIGKSIGLAKELAC 269
+A+ L C+ PCQ V++ +V+I+Y G+ C N K +G AC
Sbjct: 1117 DAVKLLCSKGYPCQNVEVGDVNIQYTGADGPATFQCSNVSPKLVGTQIPKAC 1272
Score = 79.4 bits (167), Expect(3) = 5e-023
Identities = 38/84 (45%), Positives = 43/84 (51%)
Frame = +3 / -1
Query: 846 PMWMPSVLGLSPGALTVTLSISTFLHSKMLRWKNLLLSSVMPRIWTFVTKSSTKLFGRIL 1025
P W+PSVLGLS GA+ +T S TF L WK VMP I+ VTKS+ L G L
Sbjct: 695 PTWIPSVLGLSAGAMILTSSNVTFFAPMTLMWKCFASKEVMPLIFASVTKSNLMLMGSFL 516
Query: 1026 QL*ECWHWFLLHTRAPCPSMVPWP 1097
QL W L P PS P P
Sbjct: 515 QLKVLWQLLTLQAAFPSPSKTPPP 444
Score = 51.5 bits (106), Expect(2) = 1e-095
Identities = 22/64 (34%), Positives = 35/64 (54%)
Frame = -3 / +1
Query: 1330 SDSTPMILKAWKNACEATGVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNLLGTGDLS 1151
SD T +LKA+ AC+ ++IP G Y G + + GPCK+ I I L G + G+ +
Sbjct: 214 SDITNALLKAFNEACQFPTKSTVMIPKGEYKLGEIVMMGPCKAPIRIALLGTVKADGNAN 393
Query: 1150 AYQR 1139
++
Sbjct: 394 GKEK 405
Score = 43.2 bits (88), Expect(3) = 5e-023
Identities = 25/66 (37%), Positives = 31/66 (46%)
Frame = +3 / -1
Query: 345 PLYLMSTLTSCTPWHGRLLAQLSVMASGVLEVPWMFLKTTSLTATLEAPDLTQMLLGQYF 524
P+Y M T + T HG L S AS +VP +FLK ++ L GQY
Sbjct: 1196 PVYWMFTSPTSTF*HGYPLLHKSFTASLFPDVPLIFLKLMLANLIVDGFCLLHWFHGQYS 1017
Query: 525 WSMMMG 542
WSM MG
Sbjct: 1016 WSMRMG 999
Score = 33.6 bits (67), Expect(3) = 5e-023
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3 / -1
Query: 723 MPWPGPHLTPWMRIILLPGPMEMQSS 800
+P PGPH+T R +P P E QSS
Sbjct: 818 IPCPGPHVTLSTRRFFIPSPTETQSS 741
>gb|BT009687.1| Arabidopsis thaliana At5g48140 mRNA, complete cds
Length = 1188
Score = 322 bits (698), Expect(2) = 1e-095
Identities = 125/292 (42%), Positives = 179/292 (61%)
Frame = -3 / +1
Query: 1144 QRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILPNSLVLDFVTNVQIRGI 965
+ W+ N+ +NG G DG+G W N C ++NCK LP S+ DFVT+ +IRGI
Sbjct: 283 KEKWVAFRNINGFKLNGGGVFDGEGNAAWRVNNCHKTFNCKKLPISIRFDFVTDAKIRGI 462
Query: 964 TLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVGDDCIS 785
T L++K FH+N+ KNV + V + AP +SPNTDGIH+G S + I ++ I GDDC+S
Sbjct: 463 TSLDAKHFHINVIGAKNVTFEDVKIIAPAESPNTDGIHVGRSDGIKIINSFISTGDDCVS 642
Query: 784 IGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDS 605
+G G K + + V CGPGHGIS+GSLGRY E++V +++ CT+ T NGLRIK++ +
Sbjct: 643 VGDGMKNLLVERVTCGPGHGISIGSLGRYSHEENVSGIKIINCTLQETDNGLRIKTWPSA 822
Query: 604 KSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTP 425
+ AS +E I + NVS PI+IDQ+YCP N C K S + + ++ FK I GTS
Sbjct: 823 ACTTTASDIHFENILLKNVSNPILIDQEYCPWNQCNKQKPSTIKLANISFKKIRGTSGNK 1002
Query: 424 EAITLNCANNLPCQGVQLVNVDIKYNGSGNKTMAVCKNAIGKSIGLAKELAC 269
+A+ L C+ PCQ V++ +V+I+Y G+ C N K +G AC
Sbjct: 1003 DAVKLLCSKGYPCQNVEVGDVNIQYTGADGPATFQCSNVSPKLVGTQIPKAC 1158
Score = 79.4 bits (167), Expect(3) = 4e-023
Identities = 38/84 (45%), Positives = 43/84 (51%)
Frame = +3 / -2
Query: 846 PMWMPSVLGLSPGALTVTLSISTFLHSKMLRWKNLLLSSVMPRIWTFVTKSSTKLFGRIL 1025
P W+PSVLGLS GA+ +T S TF L WK VMP I+ VTKS+ L G L
Sbjct: 581 PTWIPSVLGLSAGAMILTSSNVTFFAPMTLMWKCFASKEVMPLIFASVTKSNLMLMGSFL 402
Query: 1026 QL*ECWHWFLLHTRAPCPSMVPWP 1097
QL W L P PS P P
Sbjct: 401 QLKVLWQLLTLQAAFPSPSKTPPP 330
Score = 51.5 bits (106), Expect(2) = 1e-095
Identities = 22/64 (34%), Positives = 35/64 (54%)
Frame = -3 / +1
Query: 1330 SDSTPMILKAWKNACEATGVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNLLGTGDLS 1151
SD T +LKA+ AC+ ++IP G Y G + + GPCK+ I I L G + G+ +
Sbjct: 100 SDITNALLKAFNEACQFPTKSTVMIPKGEYKLGEIVMMGPCKAPIRIALLGTVKADGNAN 279
Query: 1150 AYQR 1139
++
Sbjct: 280 GKEK 291
Score = 43.2 bits (88), Expect(3) = 4e-023
Identities = 25/66 (37%), Positives = 31/66 (46%)
Frame = +3 / -2
Query: 345 PLYLMSTLTSCTPWHGRLLAQLSVMASGVLEVPWMFLKTTSLTATLEAPDLTQMLLGQYF 524
P+Y M T + T HG L S AS +VP +FLK ++ L GQY
Sbjct: 1082 PVYWMFTSPTSTF*HGYPLLHKSFTASLFPDVPLIFLKLMLANLIVDGFCLLHWFHGQYS 903
Query: 525 WSMMMG 542
WSM MG
Sbjct: 902 WSMRMG 885
Score = 33.6 bits (67), Expect(3) = 4e-023
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3 / -2
Query: 723 MPWPGPHLTPWMRIILLPGPMEMQSS 800
+P PGPH+T R +P P E QSS
Sbjct: 704 IPCPGPHVTLSTRRFFIPSPTETQSS 627
>gb|AY089015.1| Arabidopsis thaliana clone 16377 mRNA, complete sequence
Length = 1462
Score = 321 bits (695), Expect(2) = 3e-095
Identities = 124/292 (42%), Positives = 179/292 (61%)
Frame = -3 / +2
Query: 1144 QRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILPNSLVLDFVTNVQIRGI 965
+ W+ N+ +NG G DG+G W N C ++NCK LP S+ DFVT+ +IRGI
Sbjct: 395 KEKWVAFRNINGFKLNGGGVFDGEGNAAWRVNNCHKTFNCKKLPISIRFDFVTDAKIRGI 574
Query: 964 TLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVGDDCIS 785
T L++K FH+N+ KN+ + V + AP +SPNTDGIH+G S + I ++ I GDDC+S
Sbjct: 575 TSLDAKHFHINVIGAKNMTFEDVKIIAPAESPNTDGIHVGRSDGIKIINSFISTGDDCVS 754
Query: 784 IGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDS 605
+G G K + + V CGPGHGIS+GSLGRY E++V +++ CT+ T NGLRIK++ +
Sbjct: 755 VGDGMKNLLVERVTCGPGHGISIGSLGRYSHEENVSGIKIINCTLQETDNGLRIKTWPSA 934
Query: 604 KSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTP 425
+ AS +E I + NVS PI+IDQ+YCP N C K S + + ++ FK I GTS
Sbjct: 935 ACTTTASDIHFENILLKNVSNPILIDQEYCPWNQCNKQKPSTIKLANISFKKIRGTSGNK 1114
Query: 424 EAITLNCANNLPCQGVQLVNVDIKYNGSGNKTMAVCKNAIGKSIGLAKELAC 269
+A+ L C+ PCQ V++ +V+I+Y G+ C N K +G AC
Sbjct: 1115 DAVKLLCSKGYPCQNVEVGDVNIQYTGADGPATFQCSNVSPKLVGTQIPKAC 1270
Score = 76.7 bits (161), Expect(3) = 4e-022
Identities = 37/84 (44%), Positives = 42/84 (50%)
Frame = +3 / -2
Query: 846 PMWMPSVLGLSPGALTVTLSISTFLHSKMLRWKNLLLSSVMPRIWTFVTKSSTKLFGRIL 1025
P W+PSVLGLS GA+ +T S F L WK VMP I+ VTKS+ L G L
Sbjct: 693 PTWIPSVLGLSAGAMILTSSNVMFFAPMTLMWKCFASKEVMPLIFASVTKSNLMLMGSFL 514
Query: 1026 QL*ECWHWFLLHTRAPCPSMVPWP 1097
QL W L P PS P P
Sbjct: 513 QLKVLWQLLTLQAAFPSPSKTPPP 442
Score = 51.5 bits (106), Expect(2) = 3e-095
Identities = 22/64 (34%), Positives = 35/64 (54%)
Frame = -3 / +2
Query: 1330 SDSTPMILKAWKNACEATGVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNLLGTGDLS 1151
SD T +LKA+ AC+ ++IP G Y G + + GPCK+ I I L G + G+ +
Sbjct: 212 SDITNALLKAFNEACQFPTKSTVMIPKGEYKLGEIVMMGPCKAPIRIALLGTVKADGNAN 391
Query: 1150 AYQR 1139
++
Sbjct: 392 GKEK 403
Score = 43.2 bits (88), Expect(3) = 4e-022
Identities = 25/66 (37%), Positives = 31/66 (46%)
Frame = +3 / -2
Query: 345 PLYLMSTLTSCTPWHGRLLAQLSVMASGVLEVPWMFLKTTSLTATLEAPDLTQMLLGQYF 524
P+Y M T + T HG L S AS +VP +FLK ++ L GQY
Sbjct: 1194 PVYWMFTSPTSTF*HGYPLLHKSFTASLFPDVPLIFLKLILANLIVDGFCLLHWFHGQYS 1015
Query: 525 WSMMMG 542
WSM MG
Sbjct: 1014 WSMRMG 997
Score = 33.6 bits (67), Expect(3) = 4e-022
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3 / -2
Query: 723 MPWPGPHLTPWMRIILLPGPMEMQSS 800
+P PGPH+T R +P P E QSS
Sbjct: 816 IPCPGPHVTLSTRRFFIPSPTETQSS 739
>ref|NM_101576.1| Arabidopsis thaliana polygalacturonase AT1G17150 mRNA, complete cds
Length = 1209
Score = 297 bits (642), Expect(2) = 3e-095
Identities = 124/282 (43%), Positives = 169/282 (59%)
Frame = -3 / +1
Query: 1135 WIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILPNSLVLDFVTNVQIRGITLL 956
WI + L++ G GT+DGQG WS CQ NC L ++ DFV N + GIT L
Sbjct: 334 WINFRYINYLTVFGDGTLDGQGKKSWSLIDCQKDNNCPKLAINMGFDFVKNSSMNGITSL 513
Query: 955 NSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVGDDCISIGP 776
NSK H N + I +V + AP +SPNTDGI I SSN+ IS+T I GDDCI++
Sbjct: 514 NSKAGHFNFLSVDHFSITRVNIIAPSNSPNTDGIKIALSSNMQISNTHISTGDDCIAMLS 693
Query: 775 GSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDSKSS 596
G+ I+ VKCGPGHGIS+GSLG+ KDEK+V + V GTTNG+RIK++E S S+
Sbjct: 694 GNTNFDIYNVKCGPGHGISIGSLGKNKDEKNVNGLMVRNSVFTGTTNGIRIKTWESSAST 873
Query: 595 LKASKFLYEGITMDNVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAI 416
++ +YE + M NV PI IDQKYCP C G S + + +V KNI GTS A+
Sbjct: 874 IRIINLVYENLQMINVENPIGIDQKYCPYPPCSNMGDSHIQIRNVTLKNIWGTSKNKVAV 1053
Query: 415 TLNCANNLPCQGVQLVNVDIKYNGSGNKTMAVCKNAIGKSIG 290
C+ PC+ VQL+++++ ++G A+C+N G + G
Sbjct: 1054 KFQCSKTFPCKDVQLIDINLTHHGVDGPASALCENVDGSATG 1179
Score = 75.8 bits (159), Expect(2) = 3e-095
Identities = 30/66 (45%), Positives = 37/66 (56%)
Frame = -3 / +1
Query: 1366 DIAQLGAKGDGKSDSTPMILKAWKNACEATGVQKIVIPPGNYLTGGLELKGPCKSSIIIR 1187
D+ GAKGDGK D+T AWK+AC G K+ IP G + GG+ GPC I
Sbjct: 100 DVRSYGAKGDGKMDNTNAFTNAWKDACRWNGPSKMYIPLGTFYLGGVTFVGPCDGKISFV 279
Query: 1186 LDGNLL 1169
+DG LL
Sbjct: 280 IDGTLL 297
Score = 56.5 bits (117), Expect(4) = 1e-026
Identities = 32/81 (39%), Positives = 42/81 (51%)
Frame = +3 / -2
Query: 855 MPSVLGLSPGALTVTLSISTFLHSKMLRWKNLLLSSVMPRIWTFVTKSSTKLFGRILQL* 1034
+PSVLGL GA+ +TL + + K L+ LLLS V+P + F TKS+ + QL
Sbjct: 614 IPSVLGLLLGAIMLTLVMLKWSTDKKLKCPALLLSDVIPFMLEFFTKSNPIFIASLGQLL 435
Query: 1035 ECWHWFLLHTRAPCPSMVPWP 1097
W H P PS VP P
Sbjct: 434 SFWQSISDHDFFPWPSRVPSP 372
Score = 47.8 bits (98), Expect(4) = 1e-026
Identities = 31/90 (34%), Positives = 43/90 (47%)
Frame = +3 / -2
Query: 378 TPWHGRLLAQLSVMASGVLEVPWMFLKTTSLTATLEAPDLTQMLLGQYFWSMMMG*ETLS 557
T G++L + A+ +VP MF T E+P L GQYF SM +G T
Sbjct: 1091 TSLQGKVLLH*NFTATLFFDVPQMFFSVTFRI*M*ESPILLHGG*GQYF*SMPIGFSTFI 912
Query: 558 MVMPSYRNLLALSDDLESSYDLMRRPFVVP 647
+ SY L+ + E S+ L+R P VVP
Sbjct: 911 ICRFSYTKLIIRIVEAEDSHVLIRIPLVVP 822
Score = 47.3 bits (97), Expect(4) = 1e-026
Identities = 24/47 (51%), Positives = 27/47 (57%)
Frame = +3 / -2
Query: 1212 GPFSSSPPVR*LPGGMTIFCTPVASHAFFHALRIIGVLSDLPSPLAP 1352
GP + +PP +P GM I P HA FHA VLS LPSPLAP
Sbjct: 254 GPTNVTPPR*NVPSGMYILLGPFHLHASFHAFVNALVLSILPSPLAP 114
Score = 26.7 bits (52), Expect(4) = 1e-026
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3 / -2
Query: 723 MPWPGPHLTPWMRIILLPGPMEMQSS 800
+P PGPHLT + + P + +QSS
Sbjct: 746 IPCPGPHLTL*ISKFVFPESIAIQSS 669
>gb|AC013483.7|ATAC013483 Arabidopsis thaliana chromosome III BAC F17A17 genomic sequence,
complete sequence
Length = 121054
Score = 221 bits (477), Expect(3) = 2e-085
Identities = 90/176 (51%), Positives = 119/176 (67%)
Frame = -3 / -1
Query: 1021 ILPNSLVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGD 842
+L S+ DFV N +IR I+ +++K FH+N+ KN+ D V V AP +SPNTDGIH+G
Sbjct: 53923 LLLQSIRFDFVENAEIRDISSIDAKNFHINVLGAKNMTFDNVKVIAPAESPNTDGIHLGR 53744
Query: 841 SSNVTISSTTIGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVT 662
S V I ++ I GDDCIS+G G K + + V CGPGHGISVGSLGRY E+DV + V
Sbjct: 53743 SEGVKILNSKIATGDDCISVGDGMKNLHVENVMCGPGHGISVGSLGRYVHEQDVTGITVV 53564
Query: 661 GCTIAGTTNGLRIKSYEDSKSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNICVK 494
CT+ GT NGLRIK++ + + AS +E I ++NVS PI+IDQ+YCP N C K
Sbjct: 53563 NCTLQGTDNGLRIKTWPSAACATTASGIHFENIILNNVSNPILIDQEYCPWNQCNK 53396
Score = 215 bits (465), Expect(3) = 4e-083
Identities = 87/172 (50%), Positives = 117/172 (68%)
Frame = -3 / -3
Query: 1009 SLVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNV 830
S+ DFVTN +IR I+ +++K FH+N+ KN+ D V + AP +SPNTDGIH+G S V
Sbjct: 51380 SIRFDFVTNAEIRDISSIDAKNFHINVIGAKNMTFDNVKIMAPAESPNTDGIHLGRSVGV 51201
Query: 829 TISSTTIGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTI 650
+I ++ I GDDC+S+G G + + V CGPGHGISVGSLGRY E+DV ++V CT+
Sbjct: 51200 SIINSRISTGDDCVSVGDGMVNLLVKNVVCGPGHGISVGSLGRYGHEQDVSGIRVINCTL 51021
Query: 649 AGTTNGLRIKSYEDSKSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNICVK 494
T NGLRIK++ + S AS +E I + NVS PI+IDQ+YCP N C K
Sbjct: 51020 QETDNGLRIKTWPSAACSTTASNIHFENIILRNVSNPILIDQEYCPWNQCNK 50865
Score = 211 bits (455), Expect(3) = 2e-094
Identities = 85/172 (49%), Positives = 117/172 (68%)
Frame = -3 / -3
Query: 1009 SLVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNV 830
S+ DF+ N +IR I+ +++K FH+N+ KN+ ++ + + AP DSPNTDGIH+G S V
Sbjct: 48470 SIRFDFILNSEIRDISSIDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGV 48291
Query: 829 TISSTTIGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTI 650
I ++ I GDDCIS+G G K + + V CGPGHGISVGSLGRY E+DV ++V CT+
Sbjct: 48290 KILNSFISTGDDCISVGDGMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTL 48111
Query: 649 AGTTNGLRIKSYEDSKSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNICVK 494
T NGLRIK++ + S AS +E I + +VS PI+IDQ+YCP N C K
Sbjct: 48110 QETDNGLRIKTWPSAACSTTASDIHFEDIILKDVSNPILIDQEYCPWNQCNK 47955
Score = 165 bits (355), Expect(6) = 3e-074
Identities = 65/136 (47%), Positives = 91/136 (66%)
Frame = -3 / -2
Query: 991 VTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTT 812
+TN +I IT NSK FH+NI CKN+ + + + AP +S NTDGIHIG S+ V +
Sbjct: 57696 LTNSKINSITSTNSKLFHMNILNCKNITLSDIGIDAPPESLNTDGIHIGRSNGVNLIGAK 57517
Query: 811 IGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNG 632
I GDDC+SIG G++ + + V+CGPGHGIS+GSLGRY +E+ V+ V V C I T NG
Sbjct: 57516 IKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNG 57337
Query: 631 LRIKSYEDSKSSLKAS 584
+RIK++ S + ++
Sbjct: 57336 VRIKTWPGSPPGIASN 57289
Score = 104 bits (221), Expect(3) = 2e-094
Identities = 36/106 (33%), Positives = 60/106 (56%)
Frame = -3 / -2
Query: 1330 SDSTPMILKAWKNACEATGVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNLLGTGDLS 1151
+D +LKA+ +AC+++ K+VIP G + G +E++GPCK+ I + L G + G+
Sbjct: 48867 TDDMQALLKAFTSACQSSSPSKVVIPKGEFKLGEIEMRGPCKAPIEVTLQGTVKADGNAI 48688
Query: 1150 AYQRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILP 1013
+ W+ N++ +NG G DG+G W N C ++ CK LP
Sbjct: 48687 QGKEKWVVFGNIDGFKLNGGGAFDGEGNAAWRVNNCHKTFECKKLP 48550
Score = 96.4 bits (204), Expect(3) = 4e-083
Identities = 35/100 (35%), Positives = 57/100 (57%)
Frame = -3 / -2
Query: 1312 ILKAWKNACEATGVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNLLGTGDLSAYQRNW 1133
+L+A+ AC++ +K+VIP G + G + + GPCKS + I L G +L G+ + W
Sbjct: 51771 LLRAFTTACQSPTPRKVVIPKGQFKLGEIMMSGPCKSPVEITLLGTVLADGNSIHGKEKW 51592
Query: 1132 IEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILP 1013
+ + ++ +NG GT DG+G W N C ++ CK LP
Sbjct: 51591 VVFQRMDGFRLNGGGTFDGEGNAAWRVNNCHKTFECKKLP 51472
Score = 94.5 bits (200), Expect(3) = 2e-085
Identities = 36/104 (34%), Positives = 53/104 (50%)
Frame = -3 / -3
Query: 1324 STPMILKAWKNACEATGVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNLLGTGDLSAY 1145
S +LKA+ +AC+A K+VI G + G +E+ GPCK+ + I L G L G
Sbjct: 54323 SLQALLKAFTSACQAPTASKVVITKGEFKLGEIEMTGPCKAPVEINLQGTLKADGKAIQG 54144
Query: 1144 QRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILP 1013
+ W+ + +NG G DG+G W N C ++ CK LP
Sbjct: 54143 KERWVVFLRINGFKLNGGGIFDGEGNAAWRVNNCHKTFECKKLP 54012
Score = 73.5 bits (154), Expect(3) = 2e-094
Identities = 30/79 (37%), Positives = 43/79 (54%)
Frame = -3 / -1
Query: 505 ICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNGSGNKTM 326
IC AS + + ++ FKNI GTS +A+ L C+ PCQ V++ ++DIKYNG+
Sbjct: 47881 ICDLQKASTIKLVNISFKNIRGTSGNKDAVKLLCSKGYPCQNVEIGDIDIKYNGADGPAT 47702
Query: 325 AVCKNAIGKSIGLAKELAC 269
C N K +G AC
Sbjct: 47701 FHCSNVSPKILGSQSPKAC 47645
Score = 63.4 bits (132), Expect(7) = 2e-038
Identities = 24/62 (38%), Positives = 37/62 (59%)
Frame = -3 / +3
Query: 985 NVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIG 806
N+++ I L N++ HL +CKNV + V +P DSPNTDGIH+ + N+ I + +
Sbjct: 93018 NLRVSNIRLENAQQMHLTFQDCKNVKALNLMVTSPADSPNTDGIHVSGTQNILIQDSIVR 93197
Query: 805 VG 800
G
Sbjct: 93198 TG 93203
Score = 63.4 bits (132), Expect(3) = 2e-085
Identities = 24/72 (33%), Positives = 39/72 (54%)
Frame = -3 / -3
Query: 484 SKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNGSGNKTMAVCKNAI 305
S + + D+ FKNI GTS +A+ L C+ PC V++ N++++Y G+ +C N
Sbjct: 53183 STIKLVDISFKNIRGTSGNKDAVKLLCSKAHPCANVEIGNINLEYKGADGPPTFMCSNVS 53004
Query: 304 GKSIGLAKELAC 269
K +G AC
Sbjct: 53003 PKLVGTQNPKAC 52968
Score = 59.7 bits (124), Expect(3) = 4e-083
Identities = 22/73 (30%), Positives = 40/73 (54%)
Frame = -3 / -3
Query: 487 ASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNGSGNKTMAVCKNA 308
+S + + ++ F+ I GTS +A+ L C+ PC+ VQ+ +++I+Y G+ +C N
Sbjct: 50735 SSSIKLANISFRRIRGTSGNKDAVKLLCSKGYPCENVQVGDINIQYTGADGPATFMCSNV 50556
Query: 307 IGKSIGLAKELAC 269
K +G AC
Sbjct: 50555 RPKLVGTQFPKAC 50517
Score = 57.4 bits (119), Expect(7) = 2e-038
Identities = 22/58 (37%), Positives = 36/58 (62%)
Frame = -3 / +3
Query: 484 SKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNGSGNKTMAVCKN 311
S V V++V++KNI GTS+ P A+ C+ N+PC+G+ + NV + + + A C N
Sbjct: 94182 SAVQVSNVLYKNIQGTSSRPIAVKFVCSKNIPCRGISMQNVKLVDQTQQDVSKASCSN 94355
Score = 55.1 bits (114), Expect(6) = 3e-074
Identities = 20/58 (34%), Positives = 34/58 (58%)
Frame = -3 / -1
Query: 484 SKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNGSGNKTMAVCKN 311
S+V ++DV K I GTS T A+ L C+ +PC + L ++++ +NG ++ C N
Sbjct: 57085 SQVKLSDVTIKGIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACSN 56912
Score = 53.3 bits (110), Expect(6) = 3e-074
Identities = 20/41 (48%), Positives = 27/41 (65%)
Frame = -3 / -2
Query: 589 ASKFLYEGITMDNVSYPIIIDQKYCPNNICVKSGASKVAVN 467
AS L+E ITMDNVS P++IDQ+YCP C +++ N
Sbjct: 57297 ASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVCNRIESN 57175
Score = 50.1 bits (103), Expect(7) = 2e-038
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = -3 / +1
Query: 802 GDDCISIGPGSKMIRIHGVKCGPGHGI 722
GDDCISI GS+ +R G+ CGPGHGI
Sbjct: 93343 GDDCISIVSGSENVRATGITCGPGHGI 93423
Score = 44.6 bits (91), Expect(7) = 2e-038
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = -3 / +3
Query: 1144 QRNWIEIENVENLSINGHGTIDGQGALVWSKN 1049
+R+WI ENV NL + G G IDG G + W K+
Sbjct: 92649 RRHWIVFENVNNLRVEGGGRIDGNGHIWWPKS 92744
Score = 43.2 bits (88), Expect(7) = 2e-038
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = -3 / +3
Query: 721 SVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYE 611
S+GSLG E V +V V T+ GTTNG+RIK+++
Sbjct: 93756 SIGSLGEDNSEAYVSNVVVNKATLIGTTNGVRIKTWQ 93866
Score = 42.8 bits (87), Expect(6) = 3e-074
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -3 / -3
Query: 1264 IVIPPGNYLTGGLELKGPCKSSIIIRLDGN 1175
I +P G Y+ LE KGPCK + + L+GN
Sbjct: 58067 ITVPKGEYMVESLEFKGPCKGPVTLELNGN 57978
Score = 33.6 bits (67), Expect(6) = 3e-074
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -3 / -3
Query: 1081 DGQGALVWSKNQCQHSYNCKILP 1013
DGQG+L W N C + C LP
Sbjct: 57875 DGQGSLAWKANDCAKTGKCNSLP 57807
Score = 33.1 bits (66), Expect(7) = 2e-038
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -3 / +1
Query: 589 ASKFLYEGITMDNVSYPIIIDQKYC 515
A +++ I M NV+ PIII+Q YC
Sbjct: 93973 AKNIIFQDIIMKNVTNPIIINQDYC 94047
Score = 29.9 bits (59), Expect(7) = 2e-038
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -3 / +1
Query: 1309 LKAWKNACEATGVQKIVIP 1253
+KAW+ AC +TG+ IV P
Sbjct: 92377 MKAWEAACSSTGIVYIVAP 92433
Score = 25.4 bits (49), Expect(6) = 3e-074
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = -3 / -3
Query: 1135 WIEIENVENLSINGHGTI 1082
WI+ EN+ + ++NG+ I
Sbjct: 57932 WIDFENIADFTLNGNKAI 57879
>emb|AJ003135.1|ATAJ3135 Arabidopsis thaliana PGA5 gene, complete CDS
Length = 2556
Score = 210 bits (454), Expect(3) = 3e-094
Identities = 84/172 (48%), Positives = 117/172 (68%)
Frame = -3 / +3
Query: 1009 SLVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNV 830
S+ DF+ N +IR I+ +++K FH+N+ KN+ ++ + + AP DSPNTDGIH+G S +
Sbjct: 1548 SIRFDFILNSEIRDISSIDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGI 1727
Query: 829 TISSTTIGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTI 650
I ++ I GDDCIS+G G K + + V CGPGHGISVGSLGRY E+DV ++V CT+
Sbjct: 1728 KILNSFISTGDDCISVGDGMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTL 1907
Query: 649 AGTTNGLRIKSYEDSKSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNICVK 494
T NGLRIK++ + S AS +E I + +VS PI+IDQ+YCP N C K
Sbjct: 1908 QETDNGLRIKTWPSAACSTTASDIHFEDIILKDVSNPILIDQEYCPWNQCNK 2063
Score = 104 bits (221), Expect(3) = 3e-094
Identities = 36/106 (33%), Positives = 60/106 (56%)
Frame = -3 / +2
Query: 1330 SDSTPMILKAWKNACEATGVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNLLGTGDLS 1151
+D +LKA+ +AC+++ K+VIP G + G +E++GPCK+ I + L G + G+
Sbjct: 1151 TDDMQALLKAFTSACQSSSPSKVVIPKGEFKLGEIEMRGPCKAPIEVTLQGTVKADGNAI 1330
Query: 1150 AYQRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILP 1013
+ W+ N++ +NG G DG+G W N C ++ CK LP
Sbjct: 1331 QGKEKWVVFGNIDGFKLNGGGAFDGEGNAAWRVNNCHKTFECKKLP 1468
Score = 73.5 bits (154), Expect(3) = 3e-094
Identities = 30/79 (37%), Positives = 43/79 (54%)
Frame = -3 / +1
Query: 505 ICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNGSGNKTM 326
IC AS + + ++ FKNI GTS +A+ L C+ PCQ V++ ++DIKYNG+
Sbjct: 2137 ICDLQKASTIKLVNISFKNIRGTSGNKDAVKLLCSKGYPCQNVEIGDIDIKYNGADGPAT 2316
Query: 325 AVCKNAIGKSIGLAKELAC 269
C N K +G AC
Sbjct: 2317 FHCSNVSPKILGSQSPKAC 2373
>ref|NM_128219.1| Arabidopsis thaliana polygalacturonase AT2G26620 mRNA, complete cds
Length = 1209
Score = 310 bits (671), Expect(3) = 2e-093
Identities = 130/267 (48%), Positives = 169/267 (63%)
Frame = -3 / +1
Query: 1144 QRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILPNSLVLDFVTNVQIRGI 965
Q WI + NLSI+G GT+DGQG W N C + NC L S+ FV N I+ I
Sbjct: 322 QDTWINFRYINNLSISGSGTLDGQGKQSWPLNDCHKNPNCPKLAISMGFAFVNNSNIKDI 501
Query: 964 TLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVGDDCIS 785
T LNSK H N F + I VT+ AP DSPNTDGI +G SN+ IS+T IG GDDCI+
Sbjct: 502 TSLNSKMGHFNFFFVHHFNITGVTITAPSDSPNTDGIKMGSCSNIQISNTNIGTGDDCIA 681
Query: 784 IGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDS 605
I G+ + I + CGPGHGISVGSLG+ KDEKDV+D+ V GT++G+RIK++E S
Sbjct: 682 ILSGTTKLNISNINCGPGHGISVGSLGKNKDEKDVKDLFVRDVIFNGTSDGIRIKTWESS 861
Query: 604 KSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTP 425
S + S F+YE I M +V PI IDQKYCP+ C S V + D+ KNI+GTS
Sbjct: 862 ASKILVSNFVYENIQMIDVGKPINIDQKYCPHPPCEHERKSHVQIQDLKLKNIYGTSKNK 1041
Query: 424 EAITLNCANNLPCQGVQLVNVDIKYNG 344
A+ L C+ + PC+ V+L++++IK NG
Sbjct: 1042 VAVNLQCSKSFPCKNVELIDINIKQNG 1122
Score = 45.1 bits (92), Expect(3) = 2e-093
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = -3 / +1
Query: 1279 TGVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNLL 1169
+G KI +P G + GG+E GPCK+ I +DG LL
Sbjct: 184 SGSSKIYVPKGTFYLGGVEFVGPCKNPIEFIIDGTLL 294
Score = 30.9 bits (61), Expect(3) = 2e-093
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -3 / +1
Query: 1366 DIAQLGAKGDGKSDSTPMILKAWKNACE 1283
++ + G+K DGK+D+T W AC+
Sbjct: 94 NVQRHGSKPDGKTDNTNAFTSIWSRACK 177
>ref|NM_103464.1| Arabidopsis thaliana polygalacturonase AT1G43090 mRNA, complete cds
Length = 1335
Score = 262 bits (567), Expect(4) = 2e-092
Identities = 112/215 (52%), Positives = 138/215 (64%)
Frame = -3 / +1
Query: 1144 QRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILPNSLVLDFVTNVQIRGI 965
Q WI + NLSI+G GT+DGQG W N C + NC L ++ FV N +I+ I
Sbjct: 322 QDTWINFRYINNLSISGSGTLDGQGKYSWPLNDCHKNTNCPKLAMTMGFAFVNNSRIKDI 501
Query: 964 TLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVGDDCIS 785
T LNSK H N F I VT+ APGDSPNTDGI +G SN+ IS+T IG GDDCI+
Sbjct: 502 TSLNSKMGHFNFFSVHRFNITGVTITAPGDSPNTDGIKMGSCSNIHISNTNIGTGDDCIA 681
Query: 784 IGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDS 605
I G+ + I VKCGPGHGISVGSLG+ KDEKDV+ + V GT++G+RIK++E S
Sbjct: 682 ILSGTTNLDISNVKCGPGHGISVGSLGKNKDEKDVKHLTVRDTVFNGTSDGIRIKTWESS 861
Query: 604 KSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNIC 500
S L S F+YE I M +V PI IDQKYCP+ C
Sbjct: 862 ASKLVVSNFIYENIQMIDVGKPINIDQKYCPHPPC 966
Score = 62.9 bits (131), Expect(4) = 2e-092
Identities = 21/51 (41%), Positives = 35/51 (68%)
Frame = -3 / +1
Query: 496 KSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNG 344
K G S V + D+ KNI+GTSN A+ L C+ + PC+ V+L+++++K+ G
Sbjct: 976 KKGKSHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCKNVELIDINLKHTG 1128
Score = 45.1 bits (92), Expect(4) = 2e-092
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = -3 / +1
Query: 1279 TGVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNLL 1169
+G KI +P G + GG+E GPCK+ I +DG LL
Sbjct: 184 SGSSKIYVPKGTFYLGGVEFVGPCKNPIEFVIDGTLL 294
Score = 30.9 bits (61), Expect(4) = 2e-092
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -3 / +1
Query: 1366 DIAQLGAKGDGKSDSTPMILKAWKNAC 1286
++ + G++ DGK+D+ WK+AC
Sbjct: 94 NVRRYGSRPDGKTDNANAFTSVWKHAC 174
>gb|DQ056483.1| Arabidopsis thaliana glycoside hydrolase family 28 protein
(At1g43080) mRNA, complete cds
Length = 1215
Score = 261 bits (564), Expect(4) = 6e-092
Identities = 110/215 (51%), Positives = 138/215 (64%)
Frame = -3 / +1
Query: 1144 QRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILPNSLVLDFVTNVQIRGI 965
Q WI + NLSI+G GT+DGQG W N C + NC L ++ FV N +I+ I
Sbjct: 322 QDTWINFRYINNLSISGSGTLDGQGKYSWPLNDCHKNTNCPKLAMTMGFAFVNNSRIKDI 501
Query: 964 TLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVGDDCIS 785
T LNSK H N F I VT+ APGDSPNTDGI +G SN+ IS+T IG GDDCI+
Sbjct: 502 TSLNSKMGHFNFFSVHRFNITGVTITAPGDSPNTDGIKMGSCSNIHISNTNIGTGDDCIA 681
Query: 784 IGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDS 605
I G+ + I +KCGPGHGISVGSLG+ KDEKDV+ + V GT++G+RIK++E S
Sbjct: 682 ILSGTTNLDISNIKCGPGHGISVGSLGKNKDEKDVKHLTVRDTVFNGTSDGIRIKTWESS 861
Query: 604 KSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNIC 500
S + S F+YE I M +V PI IDQKYCP+ C
Sbjct: 862 ASKIVVSNFIYENIQMIDVGKPINIDQKYCPHPPC 966
Score = 62.9 bits (131), Expect(4) = 6e-092
Identities = 21/51 (41%), Positives = 35/51 (68%)
Frame = -3 / +1
Query: 496 KSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNG 344
K G S V + D+ KNI+GTSN A+ L C+ + PC+ V+L+++++K+ G
Sbjct: 976 KKGESHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCKNVELIDINLKHTG 1128
Score = 45.1 bits (92), Expect(4) = 6e-092
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = -3 / +1
Query: 1279 TGVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNLL 1169
+G KI +P G + GG+E GPCK+ I +DG LL
Sbjct: 184 SGSSKIYVPKGTFYLGGVEFVGPCKNPIEFVIDGTLL 294
Score = 30.4 bits (60), Expect(4) = 6e-092
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = -3 / +1
Query: 1366 DIAQLGAKGDGKSDSTPMILKAWKNAC 1286
++ + G++ DGK+D+ WK AC
Sbjct: 94 NVRRYGSRPDGKTDNANAFTSVWKRAC 174
>ref|NM_103463.1| Arabidopsis thaliana polygalacturonase AT1G43080 mRNA, complete cds
Length = 1215
Score = 261 bits (564), Expect(4) = 6e-092
Identities = 110/215 (51%), Positives = 138/215 (64%)
Frame = -3 / +1
Query: 1144 QRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILPNSLVLDFVTNVQIRGI 965
Q WI + NLSI+G GT+DGQG W N C + NC L ++ FV N +I+ I
Sbjct: 322 QDTWINFRYINNLSISGSGTLDGQGKYSWPLNDCHKNTNCPKLAMTMGFAFVNNSRIKDI 501
Query: 964 TLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVGDDCIS 785
T LNSK H N F I VT+ APGDSPNTDGI +G SN+ IS+T IG GDDCI+
Sbjct: 502 TSLNSKMGHFNFFSVHRFNITGVTITAPGDSPNTDGIKMGSCSNIHISNTNIGTGDDCIA 681
Query: 784 IGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDS 605
I G+ + I +KCGPGHGISVGSLG+ KDEKDV+ + V GT++G+RIK++E S
Sbjct: 682 ILSGTTNLDISNIKCGPGHGISVGSLGKNKDEKDVKHLTVRDTVFNGTSDGIRIKTWESS 861
Query: 604 KSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNIC 500
S + S F+YE I M +V PI IDQKYCP+ C
Sbjct: 862 ASKIVVSNFIYENIQMIDVGKPINIDQKYCPHPPC 966
Score = 62.9 bits (131), Expect(4) = 6e-092
Identities = 21/51 (41%), Positives = 35/51 (68%)
Frame = -3 / +1
Query: 496 KSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNG 344
K G S V + D+ KNI+GTSN A+ L C+ + PC+ V+L+++++K+ G
Sbjct: 976 KKGESHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCKNVELIDINLKHTG 1128
Score = 45.1 bits (92), Expect(4) = 6e-092
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = -3 / +1
Query: 1279 TGVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNLL 1169
+G KI +P G + GG+E GPCK+ I +DG LL
Sbjct: 184 SGSSKIYVPKGTFYLGGVEFVGPCKNPIEFVIDGTLL 294
Score = 30.4 bits (60), Expect(4) = 6e-092
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = -3 / +1
Query: 1366 DIAQLGAKGDGKSDSTPMILKAWKNAC 1286
++ + G++ DGK+D+ WK AC
Sbjct: 94 NVRRYGSRPDGKTDNANAFTSVWKRAC 174
>ref|NM_103465.1| Arabidopsis thaliana polygalacturonase AT1G43100 mRNA, complete cds
Length = 1335
Score = 262 bits (567), Expect(4) = 7e-091
Identities = 112/215 (52%), Positives = 138/215 (64%)
Frame = -3 / +1
Query: 1144 QRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILPNSLVLDFVTNVQIRGI 965
Q WI + NLSI+G GT+DGQG W N C + NC L ++ FV N +I+ I
Sbjct: 322 QDTWINFRYINNLSISGSGTLDGQGKYSWPLNDCHKNTNCPELAMTMGFAFVNNSRIKDI 501
Query: 964 TLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVGDDCIS 785
T LNSK H N F I VT+ APGDSPNTDGI +G SN+ IS+T IG GDDCI+
Sbjct: 502 TSLNSKMGHFNFFSVHRFNITGVTITAPGDSPNTDGIKMGSCSNIHISNTNIGTGDDCIA 681
Query: 784 IGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDS 605
I G+ + I VKCGPGHGISVGSLG+ KDEKDV+ + V GT++G+RIK++E S
Sbjct: 682 ILSGTTNLDISNVKCGPGHGISVGSLGKNKDEKDVKHLTVRDTVFNGTSDGIRIKTWESS 861
Query: 604 KSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNIC 500
S L S F+YE I M +V PI IDQKYCP+ C
Sbjct: 862 ASKLVVSNFIYENIQMIDVGKPINIDQKYCPHPPC 966
Score = 62.9 bits (131), Expect(4) = 7e-091
Identities = 21/51 (41%), Positives = 35/51 (68%)
Frame = -3 / +1
Query: 496 KSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNG 344
K G S V + D+ KNI+GTSN A+ L C+ + PC+ V+L+++++K+ G
Sbjct: 976 KKGKSHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCKNVELIDINLKHTG 1128
Score = 40.0 bits (81), Expect(4) = 7e-091
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = -3 / +1
Query: 1279 TGVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNLL 1169
+G KI +P G + GG+E GP K+ I +DG LL
Sbjct: 184 SGSSKIYVPKGKFYLGGVEFVGPYKNPIEFVIDGTLL 294
Score = 30.4 bits (60), Expect(4) = 7e-091
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = -3 / +1
Query: 1366 DIAQLGAKGDGKSDSTPMILKAWKNAC 1286
++ + G++ DGK+D+ WK AC
Sbjct: 94 NVRRYGSRPDGKTDNANAFTSVWKRAC 174
>ref|NM_127105.1| Arabidopsis thaliana polygalacturonase AT2G15450 mRNA, complete cds
Length = 1215
Score = 260 bits (563), Expect(4) = 5e-090
Identities = 111/215 (51%), Positives = 137/215 (63%)
Frame = -3 / +1
Query: 1144 QRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILPNSLVLDFVTNVQIRGI 965
Q WI + NLSI+G GT+DGQG W N C + NC L ++ FV N I+ I
Sbjct: 322 QDTWINFRYINNLSISGSGTLDGQGKQSWPHNDCHTNPNCPKLAMTMGFAFVNNSNIKDI 501
Query: 964 TLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVGDDCIS 785
T LNSK H N F + I VT+ APGDSPNTDGI +G SN+ IS T IG GDDCI+
Sbjct: 502 TSLNSKMGHFNFFSVHHFNITGVTITAPGDSPNTDGIKMGSCSNIQISDTNIGTGDDCIA 681
Query: 784 IGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDS 605
I G+ + I V CGPGHGISVGSLG+ KDEKDV+D+ V GT++G+RIK++E S
Sbjct: 682 ILSGTTNLNISNVNCGPGHGISVGSLGKNKDEKDVKDLIVRDVIFNGTSDGIRIKNWESS 861
Query: 604 KSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNIC 500
S + S F+YE I M +V PI IDQKYCP+ C
Sbjct: 862 ASKILVSNFVYENIQMIDVGKPINIDQKYCPHPPC 966
Score = 57.0 bits (118), Expect(4) = 5e-090
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = -3 / +1
Query: 496 KSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNG 344
+ G S V + ++ KNI+GTS A+ L C+ PC+ V+L++++IK NG
Sbjct: 976 RKGESHVQIQNLKLKNIYGTSKNKVAVNLQCSKIFPCKNVELIDINIKQNG 1128
Score = 45.5 bits (93), Expect(4) = 5e-090
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = -3 / +1
Query: 1279 TGVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNLLGTGDLS 1151
+G KI +P G + GG+E GPCK+ I +DG LL + S
Sbjct: 184 SGSSKIYVPKGTFYLGGVEFVGPCKNPIEFIIDGTLLAPANPS 312
Score = 29.9 bits (59), Expect(4) = 5e-090
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -3 / +1
Query: 1366 DIAQLGAKGDGKSDSTPMILKAWKNACE 1283
++ + GAK DGK+D+ W AC+
Sbjct: 94 NVQRHGAKPDGKTDNANAFTSIWSRACK 177
>ref|NM_127106.1| Arabidopsis thaliana polygalacturonase AT2G15460 mRNA, complete cds
Length = 1209
Score = 260 bits (563), Expect(4) = 5e-090
Identities = 111/215 (51%), Positives = 137/215 (63%)
Frame = -3 / +1
Query: 1144 QRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILPNSLVLDFVTNVQIRGI 965
Q WI + NLSI+G GT+DGQG W N C + NC L ++ FV N I+ I
Sbjct: 322 QDTWINFRYINNLSISGSGTLDGQGKQSWPHNDCHTNPNCPKLAMTMGFAFVNNSNIKDI 501
Query: 964 TLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVGDDCIS 785
T LNSK H N F + I VT+ APGDSPNTDGI +G SN+ IS T IG GDDCI+
Sbjct: 502 TSLNSKMGHFNFFSVHHFNITGVTITAPGDSPNTDGIKMGSCSNIQISDTNIGTGDDCIA 681
Query: 784 IGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDS 605
I G+ + I V CGPGHGISVGSLG+ KDEKDV+D+ V GT++G+RIK++E S
Sbjct: 682 ILSGTTNLNISNVNCGPGHGISVGSLGKSKDEKDVKDLIVRDVIFNGTSDGIRIKTWESS 861
Query: 604 KSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNIC 500
S + S F+YE I M +V PI IDQKYCP+ C
Sbjct: 862 ASKILVSNFVYENIQMIDVGKPINIDQKYCPHPPC 966
Score = 57.0 bits (118), Expect(4) = 5e-090
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = -3 / +1
Query: 496 KSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNG 344
+ G S V + ++ KNI+GTS A+ L C+ PC+ V+L++++IK NG
Sbjct: 976 RKGESHVQIQNLKLKNIYGTSKNKVAVNLQCSKIFPCKNVELIDINIKQNG 1128
Score = 45.5 bits (93), Expect(4) = 5e-090
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = -3 / +1
Query: 1279 TGVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNLLGTGDLS 1151
+G KI +P G + GG+E GPCK+ I +DG LL + S
Sbjct: 184 SGSSKIYVPKGTFYLGGVEFVGPCKNPIEFIIDGTLLAPANPS 312
Score = 29.9 bits (59), Expect(4) = 5e-090
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -3 / +1
Query: 1366 DIAQLGAKGDGKSDSTPMILKAWKNACE 1283
++ + GAK DGK+D+ W AC+
Sbjct: 94 NVQRHGAKPDGKTDNANAFTSIWSRACK 177
>ref|NM_117928.1| Arabidopsis thaliana polygalacturonase AT4G18180 mRNA, complete cds
Length = 1245
Score = 316 bits (685), Expect(3) = 8e-090
Identities = 128/265 (48%), Positives = 175/265 (66%)
Frame = -3 / +1
Query: 1135 WIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILPNSLVLDFVTNVQIRGITLL 956
WI+ + L++ G GT DGQGAL W N C NCK+LP SL + +R I+ +
Sbjct: 340 WIQFGWINGLTLTGGGTFDGQGALAWPFNNCTSDSNCKLLPTSLKFVGMNRTVVRRISSV 519
Query: 955 NSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVGDDCISIGP 776
NSKFFH+ + EC++ ++ + AP DSPNTDGIHI SSNV S + I GDDC+SIG
Sbjct: 520 NSKFFHIALVECRDFKGTRLNITAPSDSPNTDGIHIERSSNVYFSRSHIATGDDCVSIGQ 699
Query: 775 GSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDSKSS 596
G+ I I +KCGPGHGISVGSLGRY +EKDV + V C I+GTTNG+RIK++ +S
Sbjct: 700 GNSQITITSIKCGPGHGISVGSLGRYPNEKDVNGLVVKDCKISGTTNGIRIKTWANSPGL 879
Query: 595 LKASKFLYEGITMDNVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAI 416
A+ +E I M+NV+ PIIIDQ YCP + C+ + SKV ++++ FKNI GTS++ A+
Sbjct: 880 SAATNMTFENIIMNNVTNPIIIDQSYCPFSSCISNVPSKVELSEIYFKNIRGTSSSLVAV 1059
Query: 415 TLNCANNLPCQGVQLVNVDIKYNGS 341
L+C+ +PC+ V L NV + + S
Sbjct: 1060 QLHCSRGMPCKKVYLENVHLDLSSS 1134
Score = 29.9 bits (59), Expect(3) = 8e-090
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = -3 / +1
Query: 1369 LDIAQLGAKGDGKSDSTPMILKAWKNACEATGVQKIVIPP 1250
+D+ GA+ + D T + AW AC+++ +I P
Sbjct: 103 VDVRSFGARANDHRDHTKAFVAAWDKACKSSSSSVNLIIP 222
Score = 27.2 bits (53), Expect(3) = 8e-090
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -3 / +1
Query: 1264 IVIPPGNYLTGGLELKGPC 1208
++IP G + G L GPC
Sbjct: 211 LIIPRGEFSVGSLRFSGPC 267
>ref|NM_128875.1| Arabidopsis thaliana polygalacturonase AT2G33160 mRNA, complete cds
Length = 1995
Score = 264 bits (570), Expect(4) = 9e-090
Identities = 109/219 (49%), Positives = 145/219 (66%)
Frame = -3 / +1
Query: 1144 QRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILPNSLVLDFVTNVQIRGI 965
Q WI + V+NL++ G G +DGQG+ W N C + NC+ L ++ FV + +I G+
Sbjct: 325 QEEWILFKYVDNLTVTGGGLLDGQGSYSWPLNDCNKNTNCRTLAMNIGFAFVKSSKINGL 504
Query: 964 TLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVGDDCIS 785
+NSK H N+F ++ I VT+ APGDSPNTDGI IG SS++ I + TIG GDDCI+
Sbjct: 505 RSINSKMGHFNLFSVEDFNITGVTITAPGDSPNTDGIKIGKSSHMQIYNVTIGTGDDCIA 684
Query: 784 IGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDS 605
I G+ + I V+CGPGHGISVGSLGRYK+EK+V+ + V I GTT+GLRIK++ S
Sbjct: 685 ILDGTSNLDISDVRCGPGHGISVGSLGRYKEEKNVQGLTVRNSIINGTTDGLRIKTWAKS 864
Query: 604 KSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNICVKSG 488
S + S FLYE I M NV PI+IDQ+YCP+ C G
Sbjct: 865 VSQISVSNFLYENIQMINVGNPIVIDQQYCPHGQCDSPG 981
Score = 65.7 bits (137), Expect(4) = 9e-090
Identities = 26/66 (39%), Positives = 38/66 (57%)
Frame = -3 / +1
Query: 487 ASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNGSGNKTMAVCKNA 308
AS V + DV + NI GTS + EA+ + C+ PCQ V+L N+++ Y G A+C+N
Sbjct: 988 ASHVQIKDVKYNNIWGTSTSKEALKMQCSKTFPCQDVELSNINLHYVGRDGLVTALCENV 1167
Query: 307 IGKSIG 290
G G
Sbjct: 1168 GGSIRG 1185
Score = 31.8 bits (63), Expect(4) = 9e-090
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -3 / +1
Query: 1276 GVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNLL 1169
G + IP G + + GPCKSSI + G LL
Sbjct: 190 GRSTVYIPSGIFYLRQVTFSGPCKSSITFFIRGTLL 297
Score = 30.9 bits (61), Expect(4) = 9e-090
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -3 / +1
Query: 1366 DIAQLGAKGDGKSDSTPMILKAWKNACE 1283
D+ GA+ D + D+ KAW AC+
Sbjct: 97 DVRNYGARADSQRDNAFAFTKAWNEACQ 180
>emb|X73222.1|ATEGP A.thaliana mRNA for exopolygalacturonase
Length = 1617
Score = 193 bits (417), Expect(5) = 1e-089
Identities = 76/166 (45%), Positives = 107/166 (64%)
Frame = -3 / +2
Query: 1081 DGQGALVWSKNQCQHSYNCKILPNSLVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLID 902
DGQG+L W N C + C LP ++ +TN +I IT NSK FH+NI CKN+ +
Sbjct: 560 DGQGSLAWKANDCAKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLT 739
Query: 901 KVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVGDDCISIGPGSKMIRIHGVKCGPGHGI 722
+++ AP +S NTDGIHIG S+ V + I GDDC+SIG G++ + + V+CGPGHGI
Sbjct: 740 DISIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGI 919
Query: 721 SVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDSKSSLKAS 584
S+GSLGRY +E+ V+ V V C I T NG+RIK++ S + ++
Sbjct: 920 SIGSLGRYPNEQPVKGVTVRKCLIKNTDNGVRIKTWPGSPPGIASN 1057
Score = 105 bits (224), Expect(5) = 1e-089
Identities = 41/93 (44%), Positives = 58/93 (62%)
Frame = -3 / +2
Query: 589 ASKFLYEGITMDNVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITL 410
AS L+E ITMDNVS P++IDQ+YCP C SKV ++DV KNI GTS T A+ L
Sbjct: 1049 ASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSKVKLSDVTIKNIKGTSATKVAVKL 1228
Query: 409 NCANNLPCQGVQLVNVDIKYNGSGNKTMAVCKN 311
C+ +PC + L ++++ +NG ++ C N
Sbjct: 1229 MCSKGVPCTNIALSDINLVHNGKEGPAVSACSN 1327
Score = 76.7 bits (161), Expect(3) = 1e-022
Identities = 44/122 (36%), Positives = 55/122 (45%)
Frame = +3 / -1
Query: 723 MPWPGPHLTPWMRIILLPGPMEMQSSXXXXXXXXXXXXXESPMWMPSVLGLSPGALTVTL 902
+P PGPH T +P PME QSS + PMW+PSVL LS GA +
Sbjct: 918 IPCPGPHSTFSTMRFSVPSPMETQSSPVLIFAPIKLTPLDLPMWIPSVLRLSGGASILIS 739
Query: 903 SISTFLHSKMLRWKNLLLSSVMPRIWTFVTKSSTKLFGRILQL*ECWHWFLLHTRAPCPS 1082
FL +M WK+LL V+ I+ FV + L GR L L R P PS
Sbjct: 738 VRVMFLQLRMFMWKSLLFVDVILLIFEFVRPVNRMLIGRELHLPVLAQSLAFQARDP*PS 559
Query: 1083 MV 1088
+
Sbjct: 558 KI 553
Score = 50.1 bits (103), Expect(3) = 1e-022
Identities = 29/68 (42%), Positives = 36/68 (52%)
Frame = +3 / -1
Query: 390 GRLLAQLSVMASGVLEVPWMFLKTTSLTATLEAPDLTQMLLGQYFWSMMMG*ETLSMVMP 569
G L +S A+ V +VP MFL TS T + Q GQY WSM G TLS+V+
Sbjct: 1248 GTPLLHISFTATFVADVPLMFLIVTSDNFTFDGTPALQWP*GQYSWSMRTGRLTLSIVIS 1069
Query: 570 SYRNLLAL 593
S R L A+
Sbjct: 1068 SKRMLEAI 1045
Score = 43.7 bits (89), Expect(5) = 1e-089
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -3 / +2
Query: 1264 IVIPPGNYLTGGLELKGPCKSSIIIRLDGN 1175
I +P G YL LE KGPCK + + L+GN
Sbjct: 368 ITVPKGEYLVESLEFKGPCKGPVTLELNGN 457
Score = 42.8 bits (87), Expect(5) = 1e-089
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = -3 / +2
Query: 1369 LDIAQLGAKGDGKSDSTPMILKAWKNACEA 1280
LD+ GAKGDGK+D + AWK AC A
Sbjct: 269 LDVKASGAKGDGKTDDSAAFAAAWKEACAA 358
Score = 28.6 bits (56), Expect(3) = 1e-022
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3 / -1
Query: 1281 ASHAFFHALRIIGVLSDLPSPLAP 1352
A+ A FHA + S LPSPLAP
Sbjct: 357 AAQASFHAAANAALSSVLPSPLAP 286
Score = 24.4 bits (47), Expect(5) = 1e-089
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = -3 / +2
Query: 1135 WIEIENVENLSINGHGTI 1082
WI+ EN+ + ++NG+ I
Sbjct: 503 WIDFENLADFTLNGNKAI 556
>ref|NM_129589.1| Arabidopsis thaliana polygalacturonase AT2G40310 mRNA, complete cds
Length = 1215
Score = 257 bits (555), Expect(4) = 2e-089
Identities = 110/215 (51%), Positives = 138/215 (64%)
Frame = -3 / +1
Query: 1144 QRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILPNSLVLDFVTNVQIRGI 965
Q WI + NLSI+G GT+DGQG W N C + NC L ++ FV N I+ I
Sbjct: 322 QDTWINFRYINNLSISGSGTLDGQGKQSWPLNDCHKNLNCPKLAMTMGFAFVNNSNIKDI 501
Query: 964 TLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVGDDCIS 785
T LNSK H N F + I VT+ A GDSPNTDGI +G SN+ IS+T IG GDDCI+
Sbjct: 502 TSLNSKMGHFNFFSVHHFNITGVTITASGDSPNTDGIKMGSCSNMHISNTNIGTGDDCIA 681
Query: 784 IGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDS 605
I G+ + I VKCGPGHGISVGSLG+ KDEKDV+++ V GT++G+RIK++E S
Sbjct: 682 ILSGTTNLDISNVKCGPGHGISVGSLGKNKDEKDVKNLTVRDVIFNGTSDGIRIKTWESS 861
Query: 604 KSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNIC 500
S + S F+YE I M +V PI IDQKYCP+ C
Sbjct: 862 ASKILVSNFVYENIQMIDVGKPINIDQKYCPHPPC 966
Score = 60.2 bits (125), Expect(4) = 2e-089
Identities = 21/56 (37%), Positives = 36/56 (64%)
Frame = -3 / +1
Query: 496 KSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNGSGNKT 329
+ G S V + D+ KNI+GTS A+ L C+ + PC+ ++L++++IK NG N +
Sbjct: 976 QKGESHVQIQDLKLKNIYGTSKNKVAMNLQCSKSFPCKNIELIDINIKSNGLENSS 1143
Score = 44.1 bits (90), Expect(4) = 2e-089
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = -3 / +1
Query: 1279 TGVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNLLGTGDLS 1151
+G KI +P G + GG+E GPCK+ I +DG LL + S
Sbjct: 184 SGSSKIYVPKGIFYLGGVEFVGPCKNPIEFVIDGTLLAPANPS 312
Score = 29.5 bits (58), Expect(4) = 2e-089
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = -3 / +1
Query: 1366 DIAQLGAKGDGKSDSTPMILKAWKNACE 1283
++ + G+K DGK+D+ + W AC+
Sbjct: 94 NVQRHGSKPDGKTDNANVFTSIWSRACK 177
>ref|NM_112258.2| Arabidopsis thaliana polygalacturonase AT3G14040 mRNA, complete cds
Length = 1668
Score = 192 bits (414), Expect(5) = 3e-089
Identities = 76/166 (45%), Positives = 106/166 (63%)
Frame = -3 / +1
Query: 1081 DGQGALVWSKNQCQHSYNCKILPNSLVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLID 902
DGQG+L W N C + C LP ++ +TN +I IT NSK FH+NI CKN+ +
Sbjct: 592 DGQGSLAWKANDCAKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLT 771
Query: 901 KVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVGDDCISIGPGSKMIRIHGVKCGPGHGI 722
+ + AP +S NTDGIHIG S+ V + I GDDC+SIG G++ + + V+CGPGHGI
Sbjct: 772 DIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGI 951
Query: 721 SVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDSKSSLKAS 584
S+GSLGRY +E+ V+ V V C I T NG+RIK++ S + ++
Sbjct: 952 SIGSLGRYPNEQPVKGVTVRKCLIKNTDNGVRIKTWPGSPPGIASN 1089
Score = 105 bits (224), Expect(5) = 3e-089
Identities = 41/93 (44%), Positives = 58/93 (62%)
Frame = -3 / +1
Query: 589 ASKFLYEGITMDNVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITL 410
AS L+E ITMDNVS P++IDQ+YCP C SKV ++DV KNI GTS T A+ L
Sbjct: 1081 ASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSKVKLSDVTIKNIKGTSATKVAVKL 1260
Query: 409 NCANNLPCQGVQLVNVDIKYNGSGNKTMAVCKN 311
C+ +PC + L ++++ +NG ++ C N
Sbjct: 1261 MCSKGVPCTNIALSDINLVHNGKEGPAVSACSN 1359
Score = 43.7 bits (89), Expect(5) = 3e-089
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -3 / +1
Query: 1264 IVIPPGNYLTGGLELKGPCKSSIIIRLDGN 1175
I +P G YL LE KGPCK + + L+GN
Sbjct: 400 ITVPKGEYLVESLEFKGPCKGPVTLELNGN 489
Score = 42.8 bits (87), Expect(5) = 3e-089
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = -3 / +1
Query: 1369 LDIAQLGAKGDGKSDSTPMILKAWKNACEA 1280
LD+ GAKGDGK+D + AWK AC A
Sbjct: 301 LDVKASGAKGDGKTDDSAAFAAAWKEACAA 390
Score = 24.4 bits (47), Expect(5) = 3e-089
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = -3 / +1
Query: 1135 WIEIENVENLSINGHGTI 1082
WI+ EN+ + ++NG+ I
Sbjct: 535 WIDFENLADFTLNGNKAI 588
>ref|NM_117450.1| Arabidopsis thaliana polygalacturonase AT4G13760 mRNA, complete cds
Length = 1128
Score = 258 bits (557), Expect(4) = 3e-089
Identities = 109/215 (50%), Positives = 140/215 (65%)
Frame = -3 / +1
Query: 1144 QRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILPNSLVLDFVTNVQIRGI 965
Q WI+ + + +LSI+G GT+DGQG W N C + NC L ++ FV N I+ I
Sbjct: 235 QDTWIKFKYINDLSISGSGTLDGQGKQSWPLNDCHKNPNCPKLAMTMGFAFVNNSNIKDI 414
Query: 964 TLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVGDDCIS 785
T LNSK H N F + I VT+ APG+SPNTDGI +G SN+ IS+T IG GDDCI+
Sbjct: 415 TSLNSKMGHFNFFSVHHFNITGVTITAPGNSPNTDGIKMGSCSNIHISNTNIGTGDDCIA 594
Query: 784 IGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDS 605
I G+ + I V CGPGHGISVGSLG+ KDEKDV+D+ + GT++G+RIK++E S
Sbjct: 595 ILSGTTNLDISNVNCGPGHGISVGSLGKNKDEKDVKDLTIRDVIFNGTSDGIRIKTWESS 774
Query: 604 KSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNIC 500
S + S FLYE I M +V PI IDQKYCP+ C
Sbjct: 775 ASKILVSNFLYENIQMIDVGKPINIDQKYCPHPPC 879
Score = 54.2 bits (112), Expect(4) = 3e-089
Identities = 18/51 (35%), Positives = 32/51 (62%)
Frame = -3 / +1
Query: 496 KSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNG 344
+ G S V + ++ KNI+GTS A+ L C+ PC+ ++L++++I NG
Sbjct: 889 QKGESHVQIQNLKLKNIYGTSKNKVAVNLQCSKRFPCKNIELIDINITNNG 1041
Score = 45.5 bits (93), Expect(4) = 3e-089
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = -3 / +1
Query: 1279 TGVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNLL 1169
+G KI +P G + GG+E GPCK+ I +DG LL
Sbjct: 97 SGSSKIYVPKGTFYLGGVEFVGPCKNPIEFLIDGTLL 207
Score = 32.7 bits (65), Expect(4) = 3e-089
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -3 / +1
Query: 1366 DIAQLGAKGDGKSDSTPMILKAWKNAC 1286
++ + G+K DGK+D+T + W AC
Sbjct: 7 NVQRHGSKSDGKTDNTNVFTSVWNRAC 87
>ref|NM_127107.2| Arabidopsis thaliana polygalacturonase AT2G15470 mRNA, complete cds
Length = 1215
Score = 259 bits (559), Expect(4) = 7e-088
Identities = 110/215 (51%), Positives = 136/215 (63%)
Frame = -3 / +1
Query: 1144 QRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILPNSLVLDFVTNVQIRGI 965
Q WI + NLSI+G GT+DGQG W N C + NC L ++ FV N I+ I
Sbjct: 322 QDTWINFRYINNLSISGSGTLDGQGKQSWPHNDCHTNPNCPKLAMTMGFAFVNNSNIKDI 501
Query: 964 TLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVGDDCIS 785
T LNSK H N F + I VT+ APGDSPNTDGI +G SN+ IS T IG GDDCI+
Sbjct: 502 TSLNSKMGHFNFFSVHHFNITGVTITAPGDSPNTDGIKMGSCSNIQISDTNIGTGDDCIA 681
Query: 784 IGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDS 605
I G+ + I V CGPGHGISVGSLG+ KDEKD +D+ V GT++G+RIK++E S
Sbjct: 682 ILSGTTNLNISNVNCGPGHGISVGSLGKNKDEKDAKDLIVRDVIFNGTSDGIRIKTWESS 861
Query: 604 KSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNIC 500
S + S F+YE I M +V PI IDQKYCP+ C
Sbjct: 862 ASKILVSNFVYENIQMIDVGKPINIDQKYCPHPPC 966
Score = 56.1 bits (116), Expect(4) = 7e-088
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = -3 / +1
Query: 496 KSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNG 344
+ G S V + ++ KNI+GTS A+ L C+ PC+ V+L++++IK NG
Sbjct: 976 RKGESHVQIQNLKLKNIYGTSKNKVAMNLQCSKIFPCKNVELIDINIKQNG 1128
Score = 40.9 bits (83), Expect(4) = 7e-088
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = -3 / +1
Query: 1279 TGVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNLLGTGDLS 1151
+G KI +P G + GG+E G CK+ I +DG LL + S
Sbjct: 184 SGSSKIYVPKGTFYLGGVEFVGLCKNPIEFIIDGTLLAPANPS 312
Score = 29.9 bits (59), Expect(4) = 7e-088
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -3 / +1
Query: 1366 DIAQLGAKGDGKSDSTPMILKAWKNACE 1283
++ + GAK DGK+D+ W AC+
Sbjct: 94 NVQRHGAKPDGKTDNANAFTSIWSRACK 177
>emb|X72292.1|ATEXOPB A.thaliana (clone GBGa483) mRNA for exopolygalacturonase
Length = 1652
Score = 193 bits (415), Expect(5) = 1e-087
Identities = 76/166 (45%), Positives = 106/166 (63%)
Frame = -3 / +2
Query: 1081 DGQGALVWSKNQCQHSYNCKILPNSLVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLID 902
DGQG+L W N C + C LP ++ +TN +I IT NSK FH+NI CKN+ +
Sbjct: 551 DGQGSLAWKANDCAKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLS 730
Query: 901 KVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVGDDCISIGPGSKMIRIHGVKCGPGHGI 722
+ + AP +S NTDGIHIG S+ V + I GDDC+SIG G++ + + V+CGPGHGI
Sbjct: 731 DIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGI 910
Query: 721 SVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDSKSSLKAS 584
S+GSLGRY +E+ V+ V V C I T NG+RIK++ S + ++
Sbjct: 911 SIGSLGRYPNEQPVKGVTVRKCLIKNTDNGVRIKTWPGSPPGIASN 1048
Score = 100 bits (214), Expect(5) = 1e-087
Identities = 39/93 (41%), Positives = 57/93 (61%)
Frame = -3 / +2
Query: 589 ASKFLYEGITMDNVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITL 410
AS L+E ITMDNVS P++IDQ+YCP C S+V ++DV K I GTS T A+ L
Sbjct: 1040 ASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSQVKLSDVTIKGIKGTSATKVAVKL 1219
Query: 409 NCANNLPCQGVQLVNVDIKYNGSGNKTMAVCKN 311
C+ +PC + L ++++ +NG ++ C N
Sbjct: 1220 MCSKGVPCTNIALSDINLVHNGKEGPAVSACSN 1318
Score = 76.2 bits (160), Expect(3) = 5e-021
Identities = 44/122 (36%), Positives = 54/122 (44%)
Frame = +3 / -3
Query: 723 MPWPGPHLTPWMRIILLPGPMEMQSSXXXXXXXXXXXXXESPMWMPSVLGLSPGALTVTL 902
+P PGPH T +P PME QSS + PMW+PSVL LS GA
Sbjct: 909 IPCPGPHSTFSTMRFSVPSPMETQSSPVLIFAPIKLTPLDLPMWIPSVLRLSGGASIPIS 730
Query: 903 SISTFLHSKMLRWKNLLLSSVMPRIWTFVTKSSTKLFGRILQL*ECWHWFLLHTRAPCPS 1082
FL +M WK+LL V+ I+ FV + L GR L L R P PS
Sbjct: 729 ERVMFLQLRMFMWKSLLFVDVILLIFEFVRPVNRMLIGRELHLPVLAQSLAFQARDP*PS 550
Query: 1083 MV 1088
+
Sbjct: 549 KI 544
Score = 45.1 bits (92), Expect(3) = 5e-021
Identities = 28/68 (41%), Positives = 35/68 (51%)
Frame = +3 / -3
Query: 390 GRLLAQLSVMASGVLEVPWMFLKTTSLTATLEAPDLTQMLLGQYFWSMMMG*ETLSMVMP 569
G L +S A+ V +VP M L TS T + Q GQY WSM G TLS+V+
Sbjct: 1239 GTPLLHISFTATFVADVPLMPLIVTSDNFTCDGTPALQWP*GQYSWSMRTGRLTLSIVIS 1060
Query: 570 SYRNLLAL 593
S R L A+
Sbjct: 1059 SKRMLEAM 1036
Score = 42.8 bits (87), Expect(5) = 1e-087
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -3 / +2
Query: 1264 IVIPPGNYLTGGLELKGPCKSSIIIRLDGN 1175
I +P G Y+ LE KGPCK + + L+GN
Sbjct: 359 ITVPKGEYMVESLEFKGPCKGPVTLELNGN 448
Score = 41.4 bits (84), Expect(5) = 1e-087
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -3 / +2
Query: 1369 LDIAQLGAKGDGKSDSTPMILKAWKNACEA 1280
+D+ GAKGDGK+D + AWK AC A
Sbjct: 260 VDVKASGAKGDGKTDDSAAFAAAWKEACAA 349
Score = 28.6 bits (56), Expect(3) = 5e-021
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3 / -3
Query: 1281 ASHAFFHALRIIGVLSDLPSPLAP 1352
A+ A FHA + S LPSPLAP
Sbjct: 348 AAQASFHAAANAALSSVLPSPLAP 277
Score = 25.4 bits (49), Expect(5) = 1e-087
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = -3 / +2
Query: 1135 WIEIENVENLSINGHGTI 1082
WI+ EN+ + ++NG+ I
Sbjct: 494 WIDFENIADFTLNGNKAI 547
>gb|AY062447.1| Arabidopsis thaliana polygalacturonase; pectinase (At3g14060;
MDC16.18) mRNA, complete cds
Length = 1667
Score = 192 bits (414), Expect(5) = 2e-087
Identities = 76/166 (45%), Positives = 106/166 (63%)
Frame = -3 / +1
Query: 1081 DGQGALVWSKNQCQHSYNCKILPNSLVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLID 902
DGQG+L W N C + C LP ++ +TN +I IT NSK FH+NI CKN+ +
Sbjct: 592 DGQGSLAWKANDCAKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLT 771
Query: 901 KVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVGDDCISIGPGSKMIRIHGVKCGPGHGI 722
+ + AP +S NTDGIHIG S+ V + I GDDC+SIG G++ + + V+CGPGHGI
Sbjct: 772 DIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGI 951
Query: 721 SVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDSKSSLKAS 584
S+GSLGRY +E+ V+ V V C I T NG+RIK++ S + ++
Sbjct: 952 SIGSLGRYPNEQPVKGVTVRKCLIKNTDNGVRIKTWPGSPPGIASN 1089
Score = 105 bits (224), Expect(5) = 2e-087
Identities = 41/93 (44%), Positives = 58/93 (62%)
Frame = -3 / +1
Query: 589 ASKFLYEGITMDNVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITL 410
AS L+E ITMDNVS P++IDQ+YCP C SKV ++DV KNI GTS T A+ L
Sbjct: 1081 ASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSKVKLSDVTIKNIKGTSATKVAVKL 1260
Query: 409 NCANNLPCQGVQLVNVDIKYNGSGNKTMAVCKN 311
C+ +PC + L ++++ +NG ++ C N
Sbjct: 1261 MCSKGVPCTNIALSDINLVHNGKEGPAVSACSN 1359
Score = 43.7 bits (89), Expect(5) = 2e-087
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -3 / +1
Query: 1264 IVIPPGNYLTGGLELKGPCKSSIIIRLDGN 1175
I +P G YL LE KGPCK + + L+GN
Sbjct: 400 ITVPKGEYLVESLEFKGPCKGPVTLELNGN 489
Score = 36.3 bits (73), Expect(5) = 2e-087
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -3 / +1
Query: 1369 LDIAQLGAKGDGKSDSTPMILKAWKNACEA 1280
LD+ GAKGDGK+D + A K AC A
Sbjct: 301 LDVKASGAKGDGKTDDSAAFAAARKEACAA 390
Score = 24.4 bits (47), Expect(5) = 2e-087
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = -3 / +1
Query: 1135 WIEIENVENLSINGHGTI 1082
WI+ EN+ + ++NG+ I
Sbjct: 535 WIDFENLADFTLNGNKAI 588
>gb|AY114635.1| Arabidopsis thaliana polygalacturonase; pectinase (At3g14060) mRNA,
complete cds
Length = 1484
Score = 192 bits (414), Expect(5) = 2e-087
Identities = 76/166 (45%), Positives = 106/166 (63%)
Frame = -3 / +1
Query: 1081 DGQGALVWSKNQCQHSYNCKILPNSLVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLID 902
DGQG+L W N C + C LP ++ +TN +I IT NSK FH+NI CKN+ +
Sbjct: 502 DGQGSLAWKANDCAKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLT 681
Query: 901 KVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVGDDCISIGPGSKMIRIHGVKCGPGHGI 722
+ + AP +S NTDGIHIG S+ V + I GDDC+SIG G++ + + V+CGPGHGI
Sbjct: 682 DIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGI 861
Query: 721 SVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDSKSSLKAS 584
S+GSLGRY +E+ V+ V V C I T NG+RIK++ S + ++
Sbjct: 862 SIGSLGRYPNEQPVKGVTVRKCLIKNTDNGVRIKTWPGSPPGIASN 999
Score = 105 bits (224), Expect(5) = 2e-087
Identities = 41/93 (44%), Positives = 58/93 (62%)
Frame = -3 / +1
Query: 589 ASKFLYEGITMDNVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITL 410
AS L+E ITMDNVS P++IDQ+YCP C SKV ++DV KNI GTS T A+ L
Sbjct: 991 ASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSKVKLSDVTIKNIKGTSATKVAVKL 1170
Query: 409 NCANNLPCQGVQLVNVDIKYNGSGNKTMAVCKN 311
C+ +PC + L ++++ +NG ++ C N
Sbjct: 1171 MCSKGVPCTNIALSDINLVHNGKEGPAVSACSN 1269
Score = 43.7 bits (89), Expect(5) = 2e-087
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -3 / +1
Query: 1264 IVIPPGNYLTGGLELKGPCKSSIIIRLDGN 1175
I +P G YL LE KGPCK + + L+GN
Sbjct: 310 ITVPKGEYLVESLEFKGPCKGPVTLELNGN 399
Score = 36.3 bits (73), Expect(5) = 2e-087
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -3 / +1
Query: 1369 LDIAQLGAKGDGKSDSTPMILKAWKNACEA 1280
LD+ GAKGDGK+D + A K AC A
Sbjct: 211 LDVKASGAKGDGKTDDSAAFAAARKEACAA 300
Score = 24.4 bits (47), Expect(5) = 2e-087
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = -3 / +1
Query: 1135 WIEIENVENLSINGHGTI 1082
WI+ EN+ + ++NG+ I
Sbjct: 445 WIDFENLADFTLNGNKAI 498
>gb|AY056173.1| Arabidopsis thaliana putative exopolygalacturonase (At3g07850) mRNA,
complete cds
Length = 1705
Score = 193 bits (415), Expect(5) = 7e-087
Identities = 76/166 (45%), Positives = 106/166 (63%)
Frame = -3 / +3
Query: 1081 DGQGALVWSKNQCQHSYNCKILPNSLVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLID 902
DGQG+L W N C + C LP ++ +TN +I IT NSK FH+NI CKN+ +
Sbjct: 588 DGQGSLAWKANDCAKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLS 767
Query: 901 KVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVGDDCISIGPGSKMIRIHGVKCGPGHGI 722
+ + AP +S NTDGIHIG S+ V + I GDDC+SIG G++ + + V+CGPGHGI
Sbjct: 768 DIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGI 947
Query: 721 SVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDSKSSLKAS 584
S+GSLGRY +E+ V+ V V C I T NG+RIK++ S + ++
Sbjct: 948 SIGSLGRYPNEQPVKGVTVRKCLIKNTDNGVRIKTWPGSPPGIASN 1085
Score = 100 bits (214), Expect(5) = 7e-087
Identities = 39/93 (41%), Positives = 57/93 (61%)
Frame = -3 / +3
Query: 589 ASKFLYEGITMDNVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITL 410
AS L+E ITMDNVS P++IDQ+YCP C S+V ++DV K I GTS T A+ L
Sbjct: 1077 ASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSQVKLSDVTIKGIKGTSATKVAVKL 1256
Query: 409 NCANNLPCQGVQLVNVDIKYNGSGNKTMAVCKN 311
C+ +PC + L ++++ +NG ++ C N
Sbjct: 1257 MCSKGVPCTNIALSDINLVHNGKEGPAVSACSN 1355
Score = 42.8 bits (87), Expect(5) = 7e-087
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -3 / +3
Query: 1264 IVIPPGNYLTGGLELKGPCKSSIIIRLDGN 1175
I +P G Y+ LE KGPCK + + L+GN
Sbjct: 396 ITVPKGEYMVESLEFKGPCKGPVTLELNGN 485
Score = 38.6 bits (78), Expect(5) = 7e-087
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -3 / +3
Query: 1369 LDIAQLGAKGDGKSDSTPMILKAWKNACEA 1280
+D+ GAKGD K+D + AWK AC A
Sbjct: 297 VDVKASGAKGDSKTDDSAAFAAAWKEACAA 386
Score = 25.4 bits (49), Expect(5) = 7e-087
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = -3 / +3
Query: 1135 WIEIENVENLSINGHGTI 1082
WI+ EN+ + ++NG+ I
Sbjct: 531 WIDFENIADFTLNGNKAI 584
>ref|NM_111664.1| Arabidopsis thaliana polygalacturonase AT3G07850 mRNA, complete cds
Length = 1690
Score = 193 bits (415), Expect(5) = 7e-087
Identities = 76/166 (45%), Positives = 106/166 (63%)
Frame = -3 / +3
Query: 1081 DGQGALVWSKNQCQHSYNCKILPNSLVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLID 902
DGQG+L W N C + C LP ++ +TN +I IT NSK FH+NI CKN+ +
Sbjct: 588 DGQGSLAWKANDCAKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLS 767
Query: 901 KVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVGDDCISIGPGSKMIRIHGVKCGPGHGI 722
+ + AP +S NTDGIHIG S+ V + I GDDC+SIG G++ + + V+CGPGHGI
Sbjct: 768 DIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGI 947
Query: 721 SVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDSKSSLKAS 584
S+GSLGRY +E+ V+ V V C I T NG+RIK++ S + ++
Sbjct: 948 SIGSLGRYPNEQPVKGVTVRKCLIKNTDNGVRIKTWPGSPPGIASN 1085
Score = 100 bits (214), Expect(5) = 7e-087
Identities = 39/93 (41%), Positives = 57/93 (61%)
Frame = -3 / +3
Query: 589 ASKFLYEGITMDNVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITL 410
AS L+E ITMDNVS P++IDQ+YCP C S+V ++DV K I GTS T A+ L
Sbjct: 1077 ASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSQVKLSDVTIKGIKGTSATKVAVKL 1256
Query: 409 NCANNLPCQGVQLVNVDIKYNGSGNKTMAVCKN 311
C+ +PC + L ++++ +NG ++ C N
Sbjct: 1257 MCSKGVPCTNIALSDINLVHNGKEGPAVSACSN 1355
Score = 42.8 bits (87), Expect(5) = 7e-087
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -3 / +3
Query: 1264 IVIPPGNYLTGGLELKGPCKSSIIIRLDGN 1175
I +P G Y+ LE KGPCK + + L+GN
Sbjct: 396 ITVPKGEYMVESLEFKGPCKGPVTLELNGN 485
Score = 38.6 bits (78), Expect(5) = 7e-087
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -3 / +3
Query: 1369 LDIAQLGAKGDGKSDSTPMILKAWKNACEA 1280
+D+ GAKGD K+D + AWK AC A
Sbjct: 297 VDVKASGAKGDSKTDDSAAFAAAWKEACAA 386
Score = 25.4 bits (49), Expect(5) = 7e-087
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = -3 / +3
Query: 1135 WIEIENVENLSINGHGTI 1082
WI+ EN+ + ++NG+ I
Sbjct: 531 WIDFENIADFTLNGNKAI 584
>gb|AY091200.1| Arabidopsis thaliana putative exopolygalacturonase (At3g07850) mRNA,
complete cds
Length = 1366
Score = 193 bits (415), Expect(5) = 7e-087
Identities = 76/166 (45%), Positives = 106/166 (63%)
Frame = -3 / +1
Query: 1081 DGQGALVWSKNQCQHSYNCKILPNSLVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLID 902
DGQG+L W N C + C LP ++ +TN +I IT NSK FH+NI CKN+ +
Sbjct: 499 DGQGSLAWKANDCAKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLS 678
Query: 901 KVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVGDDCISIGPGSKMIRIHGVKCGPGHGI 722
+ + AP +S NTDGIHIG S+ V + I GDDC+SIG G++ + + V+CGPGHGI
Sbjct: 679 DIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGI 858
Query: 721 SVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDSKSSLKAS 584
S+GSLGRY +E+ V+ V V C I T NG+RIK++ S + ++
Sbjct: 859 SIGSLGRYPNEQPVKGVTVRKCLIKNTDNGVRIKTWPGSPPGIASN 996
Score = 100 bits (214), Expect(5) = 7e-087
Identities = 39/93 (41%), Positives = 57/93 (61%)
Frame = -3 / +1
Query: 589 ASKFLYEGITMDNVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITL 410
AS L+E ITMDNVS P++IDQ+YCP C S+V ++DV K I GTS T A+ L
Sbjct: 988 ASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSQVKLSDVTIKGIKGTSATKVAVKL 1167
Query: 409 NCANNLPCQGVQLVNVDIKYNGSGNKTMAVCKN 311
C+ +PC + L ++++ +NG ++ C N
Sbjct: 1168 MCSKGVPCTNIALSDINLVHNGKEGPAVSACSN 1266
Score = 42.8 bits (87), Expect(5) = 7e-087
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -3 / +1
Query: 1264 IVIPPGNYLTGGLELKGPCKSSIIIRLDGN 1175
I +P G Y+ LE KGPCK + + L+GN
Sbjct: 307 ITVPKGEYMVESLEFKGPCKGPVTLELNGN 396
Score = 38.6 bits (78), Expect(5) = 7e-087
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -3 / +1
Query: 1369 LDIAQLGAKGDGKSDSTPMILKAWKNACEA 1280
+D+ GAKGD K+D + AWK AC A
Sbjct: 208 VDVKASGAKGDSKTDDSAAFAAAWKEACAA 297
Score = 25.4 bits (49), Expect(5) = 7e-087
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = -3 / +1
Query: 1135 WIEIENVENLSINGHGTI 1082
WI+ EN+ + ++NG+ I
Sbjct: 442 WIDFENIADFTLNGNKAI 495
>gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom arm complete sequence
Length = 14668883
Score = 230 bits (497), Expect(3) = 5e-086
Identities = 96/215 (44%), Positives = 136/215 (63%)
Frame = -3 / -1
Query: 1144 QRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILPNSLVLDFVTNVQIRGI 965
Q +WI V+ L+++G G +DGQG+ W N C+ ++NC+ LP ++ FV ++ I
Sbjct: 13740452 QDSWIIFRYVDYLTVSGGGILDGQGSYSWPLNNCRQTHNCRALPMNMGFQFVRFSRLTRI 13740273
Query: 964 TLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVGDDCIS 785
+NSK HLN F ++ I +V +KAPGDSPNTDGI IG S+++ I I GDDCI+
Sbjct: 13740272 KSINSKMGHLNFFSVQHFDITRVNIKAPGDSPNTDGIKIGSSNHMKIHHVDIATGDDCIA 13740093
Query: 784 IGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDS 605
I G+ + I+ V CGPGHGISVGSLG++K EK V+ + V GT+NG+RIK++
Sbjct: 13740092 ILSGTFNLDINKVNCGPGHGISVGSLGKFKGEKSVQGLIVRNSIFNGTSNGVRIKTWPSP 13739913
Query: 604 KSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNIC 500
S FL++ + M +V PI IDQ+YCPN C
Sbjct: 13739912 GEPNLVSNFLFKNLQMIDVQSPINIDQRYCPNPPC 13739808
Score = 214 bits (461), Expect(4) = 2e-069
Identities = 92/165 (55%), Positives = 112/165 (67%)
Frame = -3 / -2
Query: 994 FVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISST 815
FV N +I+ IT LNSK H N F I VT+ APGDSPNTDGI +G SN+ IS+T
Sbjct: 704482 FVNNSRIKDITSLNSKMGHFNFFSVHRFNITGVTITAPGDSPNTDGIKMGSCSNIHISNT 704303
Query: 814 TIGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTN 635
IG GDDCI+I G+ + I VKCGPGHGISVGSLG+ KDEKDV+ + V GT++
Sbjct: 704302 NIGTGDDCIAILSGTTNLDISNVKCGPGHGISVGSLGKNKDEKDVKHLTVRDTVFNGTSD 704123
Query: 634 GLRIKSYEDSKSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNIC 500
G+RIK++E S S L S F+YE I M +V PI IDQKYCP+ C
Sbjct: 704122 GIRIKTWESSASKLVVSNFIYENIQMIDVGKPINIDQKYCPHPPC 703988
Score = 214 bits (461), Expect(4) = 3e-069
Identities = 92/165 (55%), Positives = 112/165 (67%)
Frame = -3 / -1
Query: 994 FVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISST 815
FV N +I+ IT LNSK H N F I VT+ APGDSPNTDGI +G SN+ IS+T
Sbjct: 707804 FVNNSRIKDITSLNSKMGHFNFFSVHRFNITGVTITAPGDSPNTDGIKMGSCSNIHISNT 707625
Query: 814 TIGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTN 635
IG GDDCI+I G+ + I VKCGPGHGISVGSLG+ KDEKDV+ + V GT++
Sbjct: 707624 NIGTGDDCIAILSGTTNLDISNVKCGPGHGISVGSLGKNKDEKDVKHLTVRDTVFNGTSD 707445
Query: 634 GLRIKSYEDSKSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNIC 500
G+RIK++E S S L S F+YE I M +V PI IDQKYCP+ C
Sbjct: 707444 GIRIKTWESSASKLVVSNFIYENIQMIDVGKPINIDQKYCPHPPC 707310
Score = 212 bits (458), Expect(4) = 6e-069
Identities = 90/165 (54%), Positives = 112/165 (67%)
Frame = -3 / -3
Query: 994 FVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISST 815
FV N +I+ IT LNSK H N F I VT+ APGDSPNTDGI +G SN+ IS+T
Sbjct: 701160 FVNNSRIKDITSLNSKMGHFNFFSVHRFNITGVTITAPGDSPNTDGIKMGSCSNIHISNT 700981
Query: 814 TIGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTN 635
IG GDDCI+I G+ + I +KCGPGHGISVGSLG+ KDEKDV+ + V GT++
Sbjct: 700980 NIGTGDDCIAILSGTTNLDISNIKCGPGHGISVGSLGKNKDEKDVKHLTVRDTVFNGTSD 700801
Query: 634 GLRIKSYEDSKSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNIC 500
G+RIK++E S S + S F+YE I M +V PI IDQKYCP+ C
Sbjct: 700800 GIRIKTWESSASKIVVSNFIYENIQMIDVGKPINIDQKYCPHPPC 700666
Score = 209 bits (451), Expect(4) = 2e-062
Identities = 89/165 (53%), Positives = 111/165 (67%)
Frame = -3 / -2
Query: 994 FVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISST 815
FV N +++ IT LNSK H N F I VT+ APGDSPNTDGI +G SN+ IS+T
Sbjct: 711145 FVNNSRMKDITSLNSKMGHFNFFSVHRFNITGVTITAPGDSPNTDGIKMGSCSNIHISNT 710966
Query: 814 TIGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTN 635
IG GDDCI+I G+ + I VKCGPGHGISVG LG+ KDEKDV+ + V GT++
Sbjct: 710965 NIGTGDDCIAILSGTTNLDISNVKCGPGHGISVGRLGKNKDEKDVKHLTVRDTVFNGTSD 710786
Query: 634 GLRIKSYEDSKSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNIC 500
G+RIK++E S S + S F+YE I M +V PI IDQKYCP+ C
Sbjct: 710785 GIRIKTWESSASKIVVSNFIYENIQMIDVGKPINIDQKYCPHPPC 710651
Score = 161 bits (347), Expect(4) = 4e-047
Identities = 63/124 (50%), Positives = 89/124 (71%)
Frame = -3 / -1
Query: 985 NVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIG 806
NV+I+G+ LNS+ FH+ I C+N+ I+ V + AP +SPNTDGIHI S+++ + + +I
Sbjct: 8616335 NVKIKGVLSLNSQLFHIAINRCRNIKIEDVRIIAPDESPNTDGIHIQLSTDIEVRNASIK 8616156
Query: 805 VGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLR 626
GDDCISIGPG+K + + G+ CGPGHGIS+GSL + +E+ VE+V V T NGLR
Sbjct: 8616155 TGDDCISIGPGTKNLMVDGITCGPGHGISIGSLAKSIEEQGVENVTVKNAVFVRTDNGLR 8615976
Query: 625 IKSY 614
IKS+
Sbjct: 8615975 IKSW 8615964
Score = 158 bits (340), Expect(3) = 4e-041
Identities = 68/127 (53%), Positives = 86/127 (67%)
Frame = -3 / -3
Query: 880 GDSPNTDGIHIGDSSNVTISSTTIGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGR 701
GDSPNTD I +G SN+ IS+T IG DDCI I G+ + I VKCG HGISVGSLG+
Sbjct: 672888 GDSPNTDSIKMGSCSNIHISNTNIGTRDDCIVILSGTTNLDISNVKCGSVHGISVGSLGK 672709
Query: 700 YKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDSKSSLKASKFLYEGITMDNVSYPIIIDQK 521
KDEKDV+ + V GT++G+RIK++E S S + + F+YE I M +V PI IDQK
Sbjct: 672708 NKDEKDVKHLTVRDTVFNGTSDGIRIKTWESSASIIVVTNFIYENIQMIDVGKPINIDQK 672529
Query: 520 YCPNNIC 500
YCP+ C
Sbjct: 672528 YCPHPPC 672508
Score = 76.2 bits (160), Expect(3) = 3e-032
Identities = 29/64 (45%), Positives = 41/64 (64%)
Frame = -3 / -1
Query: 802 GDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRI 623
GDDCISI G + +H V CGPGHGIS+GSLG+ + V ++ V + T G+RI
Sbjct: 6556415 GDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDSTKACVSNITVRDVVMHNTMTGVRI 6556236
Query: 622 KSYE 611
K+++
Sbjct: 6556235 KTWQ 6556224
Score = 74.4 bits (156), Expect(7) = 3e-025
Identities = 29/63 (46%), Positives = 42/63 (66%)
Frame = -3 / -3
Query: 988 TNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTI 809
+ V+I+GI +NS FH+ C +V++D V +KAP SPNTDGIHI ++ NV I ++ I
Sbjct: 5618634 SKVRIQGINFMNSAQFHVRFDNCSDVVVDSVIIKAPASSPNTDGIHIENTHNVQIRNSMI 5618455
Query: 808 GVG 800
G
Sbjct: 5618454 SNG 5618446
Score = 73.9 bits (155), Expect(3) = 5e-086
Identities = 30/73 (41%), Positives = 43/73 (58%)
Frame = -3 / -1
Query: 484 SKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNGSGNKTMAVCKNAI 305
SK+ + DV F+NI GTS EA+ L C+ N+PC+ VQL N++I + G +VC+N
Sbjct: 13739717 SKIQIRDVKFQNIWGTSTAKEAVKLQCSKNVPCKNVQLFNINIVHRGRDGPATSVCENVG 13739538
Query: 304 GKSIGLAKELACI 266
G G +CI
Sbjct: 13739537 GWIGGKISPPSCI 13739499
Score = 71.6 bits (150), Expect(3) = 3e-032
Identities = 29/62 (46%), Positives = 40/62 (64%)
Frame = -3 / -2
Query: 985 NVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIG 806
+V + GIT+ NS HL C VL+ V V +PGDSPNTDGIH+ ++ +V I +TT+
Sbjct: 6556684 DVTVTGITIQNSPQCHLKFDNCVKVLVHDVNVSSPGDSPNTDGIHLQNTRDVMIHTTTLA 6556505
Query: 805 VG 800
G
Sbjct: 6556504 CG 6556499
Score = 71.6 bits (150), Expect(4) = 7e-028
Identities = 30/63 (47%), Positives = 41/63 (65%)
Frame = -3 / -3
Query: 988 TNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTI 809
+NV +RG+T+ NS+ HL I V I +V V +PGDSPNTDGIHI S++V + + I
Sbjct: 10809045 SNVYVRGLTIRNSQQMHLIIQRSTTVRISRVMVTSPGDSPNTDGIHITASTDVVVQDSKI 10808866
Query: 808 GVG 800
G
Sbjct: 10808865 STG 10808857
Score = 62.9 bits (131), Expect(5) = 4e-041
Identities = 23/62 (37%), Positives = 38/62 (61%)
Frame = -3 / -2
Query: 985 NVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIG 806
N+++ + +++S+ H+ + C+ V I + V AP SPNTDGIHI S + I +TT+
Sbjct: 14395936 NMRVENLNVIDSQQMHIALTSCRRVTISGLKVIAPATSPNTDGIHISVSRGIVIDNTTVS 14395757
Query: 805 VG 800
G
Sbjct: 14395756 TG 14395751
Score = 60.6 bits (126), Expect(4) = 6e-069
Identities = 20/49 (40%), Positives = 34/49 (69%)
Frame = -3 / -2
Query: 490 GASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNG 344
G S V + D+ KNI+GTSN A+ L C+ + PC+ V+L+++++K+ G
Sbjct: 700558 GESHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCKNVELIDINLKHTG 700412
Score = 60.6 bits (126), Expect(4) = 2e-069
Identities = 20/49 (40%), Positives = 34/49 (69%)
Frame = -3 / -1
Query: 490 GASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNG 344
G S V + D+ KNI+GTSN A+ L C+ + PC+ V+L+++++K+ G
Sbjct: 703880 GKSHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCKNVELIDINLKHTG 703734
Score = 60.6 bits (126), Expect(4) = 3e-069
Identities = 20/49 (40%), Positives = 34/49 (69%)
Frame = -3 / -3
Query: 490 GASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNG 344
G S V + D+ KNI+GTSN A+ L C+ + PC+ V+L+++++K+ G
Sbjct: 707202 GKSHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCKNVELIDINLKHTG 707056
Score = 57.9 bits (120), Expect(4) = 2e-062
Identities = 19/49 (38%), Positives = 33/49 (67%)
Frame = -3 / -1
Query: 490 GASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNG 344
G S V + D+ KNI+GTS A+ L C+ + PC+ V+L+++++K+ G
Sbjct: 672401 GESHVQIQDIKLKNIYGTSKNIMAVNLQCSKSFPCKNVELIDINLKHTG 672255
Score = 57.4 bits (119), Expect(3) = 2e-021
Identities = 24/62 (38%), Positives = 37/62 (59%)
Frame = -3 / +2
Query: 985 NVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIG 806
NV ++ + NS H+ + +NV ID + + +P SPNTDGIHI S+ V+I+ + I
Sbjct: 14388440 NVTLKSLRFRNSAQTHVLVMGSQNVYIDDIKITSPEASPNTDGIHITSSTAVSINHSDIA 14388619
Query: 805 VG 800
G
Sbjct: 14388620 TG 14388625
Score = 56.5 bits (117), Expect(3) = 5e-086
Identities = 22/57 (38%), Positives = 34/57 (59%)
Frame = -3 / -1
Query: 1306 KAWKNACEATGVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNLLGTGDLSAYQRN 1136
KAWK+AC+ G+ ++ IP G + G + GPCKS I + G LL D +A +++
Sbjct: 13740617 KAWKDACQWKGLPRVYIPFGTFYLGAVAFTGPCKSRISFIIKGTLLAPKDPNAIKQD 13740447
Score = 55.1 bits (114), Expect(5) = 4e-041
Identities = 21/77 (27%), Positives = 43/77 (55%)
Frame = -3 / -3
Query: 496 KSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNGSGNKTMAVC 317
K S +++ ++ F ++ GTS + EAI ++C+++ PC+ + L ++D++ + T + C
Sbjct: 14395152 KLQTSAISIENISFVHVRGTSASKEAIKISCSDSSPCRNILLQDIDLEPSNGDGFTESFC 14394973
Query: 316 KNAIGKSIGLAKELACI 266
A G S G C+
Sbjct: 14394972 WEAYGSSSGQVYPPPCL 14394922
Score = 53.8 bits (111), Expect(4) = 6e-069
Identities = 19/40 (47%), Positives = 23/40 (57%)
Frame = -3 / -1
Query: 1144 QRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNC 1025
Q WI + NLSI+G GT+DGQG W N C + NC
Sbjct: 701522 QDTWINFRYINNLSISGSGTLDGQGKYSWPLNDCHKNTNC 701403
Score = 53.8 bits (111), Expect(4) = 2e-069
Identities = 19/40 (47%), Positives = 23/40 (57%)
Frame = -3 / -3
Query: 1144 QRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNC 1025
Q WI + NLSI+G GT+DGQG W N C + NC
Sbjct: 704844 QDTWINFRYINNLSISGSGTLDGQGKYSWPLNDCHKNTNC 704725
Score = 53.8 bits (111), Expect(4) = 3e-069
Identities = 19/40 (47%), Positives = 23/40 (57%)
Frame = -3 / -1
Query: 1144 QRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNC 1025
Q WI + NLSI+G GT+DGQG W N C + NC
Sbjct: 708167 QDTWINFRYINNLSISGSGTLDGQGKYSWPLNDCHKNTNC 708048
Score = 51.0 bits (105), Expect(4) = 4e-047
Identities = 16/37 (43%), Positives = 28/37 (75%)
Frame = -3 / -3
Query: 454 KNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNG 344
KNI+GTSN A+ L C+ + PC+ V+L+++++K+ G
Sbjct: 710508 KNIYGTSNNIVAVNLQCSKSFPCKNVELIDINLKHTG 710398
Score = 47.8 bits (98), Expect(4) = 2e-062
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = -3 / -3
Query: 1144 QRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNC 1025
Q WI + NLSI+G GT+DGQG N C + NC
Sbjct: 711504 QDTWINFRYINNLSISGSGTLDGQGKYSLPLNDCHKNTNC 711385
Score = 47.8 bits (98), Expect(4) = 4e-047
Identities = 20/40 (50%), Positives = 25/40 (62%)
Frame = -3 / -1
Query: 619 SYEDSKSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNIC 500
S+E S S + S F+YE I M +V PI IDQKYC + C
Sbjct: 714107 SWESSASKIVVSNFIYENIQMIDVGKPINIDQKYCSHPPC 713988
Score = 46.4 bits (95), Expect(7) = 3e-025
Identities = 14/35 (40%), Positives = 26/35 (74%)
Frame = -3 / -2
Query: 454 KNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKY 350
KNI+GTSN + L C+ + PC+ V+L+++++K+
Sbjct: 713845 KNIYGTSNNIVTVNLQCSKSFPCKNVELIDINLKH 713741
Score = 45.5 bits (93), Expect(3) = 4e-041
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = -3 / -2
Query: 1144 QRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYN 1028
Q WI + NLSI G GTI+GQG W N C + N
Sbjct: 673363 QDTWINF*YINNLSIFGSGTIEGQGKYFWPLNDCHKNTN 673247
Score = 45.5 bits (93), Expect(5) = 4e-041
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = -3 / -2
Query: 805 VGDDCISIGPGSKMIRIHGVKCGPGHGI 722
+GDDCISI S I I + CGPGHGI
Sbjct: 14395681 IGDDCISIVKNSTQISISNIICGPGHGI 14395598
Score = 45.1 bits (92), Expect(4) = 6e-069
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = -3 / -1
Query: 1279 TGVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNLL 1169
+G KI +P G + GG+E GPCK+ I +DG LL
Sbjct: 701660 SGSSKIYVPKGTFYLGGVEFVGPCKNPIEFVIDGTLL 701550
Score = 45.1 bits (92), Expect(4) = 2e-069
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = -3 / -3
Query: 1279 TGVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNLL 1169
+G KI +P G + GG+E GPCK+ I +DG LL
Sbjct: 704982 SGSSKIYVPKGTFYLGGVEFVGPCKNPIEFVIDGTLL 704872
Score = 45.1 bits (92), Expect(4) = 7e-028
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = -3 / -2
Query: 802 GDDCISIGPGSKMIRIHGVKCGPGHGI 722
GDDC+SI GS I++ + CGPGHGI
Sbjct: 10808761 GDDCVSIVNGSAKIKMKRIYCGPGHGI 10808681
Score = 44.6 bits (91), Expect(3) = 2e-021
Identities = 19/48 (39%), Positives = 29/48 (60%)
Frame = -3 / +1
Query: 721 SVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDSKSSLKASKF 578
S+GSLGR E VE+++V+ GTTNG RIK++ ++ +F
Sbjct: 14388865 SIGSLGRGGTEVTVENIRVSHVNFTGTTNGARIKTWPGGTGYVRGIEF 14389008
Score = 44.6 bits (91), Expect(4) = 3e-069
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = -3 / -3
Query: 1276 GVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNLL 1169
G KI +P G + GG+E GPCK+ I +DG LL
Sbjct: 711639 GSSKIYVPKGTFYLGGVEFVGPCKNPIEFVIDGTLL 711532
Score = 44.6 bits (91), Expect(7) = 3e-025
Identities = 17/27 (62%), Positives = 18/27 (66%)
Frame = -3 / -1
Query: 802 GDDCISIGPGSKMIRIHGVKCGPGHGI 722
GDDCISIG G + I V CGP HGI
Sbjct: 5618363 GDDCISIGAGCFNVDIKNVTCGPSHGI 5618283
Score = 41.8 bits (85), Expect(5) = 4e-041
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = -3 / -1
Query: 721 SVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYE 611
S+GSLG+ K ++V D+ V I+ T NG+RIK+++
Sbjct: 14395532 SIGSLGKSKSWEEVRDITVDTAIISDTANGVRIKTWQ 14395422
Score = 40.9 bits (83), Expect(3) = 2e-021
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -3 / +3
Query: 802 GDDCISIGPGSKMIRIHGVKCGPGHGI 722
GDDC+SIG + + + CGPGHG+
Sbjct: 14388702 GDDCVSIGDQVNNLNVTFMNCGPGHGV 14388782
Score = 40.5 bits (82), Expect(7) = 3e-025
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = -3 / -1
Query: 721 SVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDSKSSLKASKF 578
S+GSLG + + V ++ VT TI + NG+RIK+++ S+ F
Sbjct: 5618120 SIGSLGVHNSQAYVSNITVTNSTIWNSDNGVRIKTWQGGSGSVSRIVF 5617977
Score = 40.0 bits (81), Expect(3) = 4e-041
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = -3 / -1
Query: 1279 TGVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNLL 1169
+G KI +P G + GG+E GP K+ I +DG LL
Sbjct: 708305 SGSSKIYVPKGKFYLGGVEFVGPYKNPIEFVIDGTLL 708195
Score = 39.1 bits (79), Expect(5) = 4e-041
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = -3 / -3
Query: 586 SKFLYEGITMDNVSYPIIIDQKYC 515
SK ++ I M+NVS PIIIDQ YC
Sbjct: 14395320 SKIIFRNIKMNNVSNPIIIDQYYC 14395249
Score = 38.6 bits (78), Expect(7) = 3e-025
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -3 / -2
Query: 1153 SAYQRNWIEIENVENLSINGHGTIDGQGALVWS 1055
S YQR W+ V LSI G G I+G+G W+
Sbjct: 5618911 SNYQRQWMMFYRVNGLSIQGSGVINGRGQKWWN 5618813
Score = 37.3 bits (75), Expect(7) = 3e-025
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -3 / -1
Query: 586 SKFLYEGITMDNVSYPIIIDQKYCPNNICVKSGASKV 476
S+ ++ I M NV PI+IDQ YC N C ++ +
Sbjct: 5617991 SRIVFSNILMVNVRNPIMIDQYYCQTNNCANQTSAVI 5617881
Score = 37.3 bits (75), Expect(4) = 4e-047
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = -3 / -2
Query: 1147 YQRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKI 1019
+ RNW++ ++ + G+G IDG G W+ + ++ N I
Sbjct: 10809388 FPRNWLQFSKLQGVVFQGNGVIDGSGTKWWAASCKKNKSNVSI 10809260
Score = 35.0 bits (70), Expect(4) = 2e-062
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -3 / -2
Query: 1309 LKAWKNACEATGVQKIVIPPGNYLTGGLELKGPCKSSIIIRL 1184
++AW AC A +V +YL + GPC+ +II++
Sbjct: 10809667 IRAWTMACSAPNSVLLVPQGRSYLVNATKFDGPCQEKLIIQV 10809542
Score = 34.1 bits (68), Expect(7) = 3e-025
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = -3 / -3
Query: 1369 LDIAQLGAKGDGKSDSTPMILKAWKNACEATGVQKIVIPPGNYLTGG 1229
L++ GA +G +S AW AC I +P G YL G
Sbjct: 8617071 LNVLSFGANPNGIVESAKAFSDAWDAACGVEDSVVIYVPKGRYLVSG 8616931
Score = 33.6 bits (67), Expect(4) = 7e-028
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = -3 / -3
Query: 721 SVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYE 611
S+GSLG+ + V V + + TTNGLRIK+++
Sbjct: 10808604 SIGSLGQGHSKGTVTAVVLETAFLKNTTNGLRIKTWQ 10808494
Score = 32.2 bits (64), Expect(3) = 3e-032
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -3 / -3
Query: 577 LYEGITMDNVSYPIIIDQKYCPNNICV 497
L+ I + V PI+IDQ YC ++ C+
Sbjct: 6556110 LFSNIQLTEVQLPIVIDQFYCDHSKCM 6556030
Score = 31.8 bits (63), Expect(4) = 7e-028
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -3 / -1
Query: 574 YEGITMDNVSYPIIIDQKYC 515
+E + M +V+ PIIIDQ YC
Sbjct: 10808381 FENVVMQDVANPIIIDQFYC 10808322
>emb|AX652128.1| Sequence 1979 from Patent WO03000898
Length = 95769
Score = 230 bits (497), Expect(3) = 5e-086
Identities = 96/215 (44%), Positives = 136/215 (63%)
Frame = -3 / +2
Query: 1144 QRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILPNSLVLDFVTNVQIRGI 965
Q +WI V+ L+++G G +DGQG+ W N C+ ++NC+ LP ++ FV ++ I
Sbjct: 27194 QDSWIIFRYVDYLTVSGGGILDGQGSYSWPLNNCRQTHNCRALPMNMGFQFVRFSRLTRI 27373
Query: 964 TLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVGDDCIS 785
+NSK HLN F ++ I +V +KAPGDSPNTDGI IG S+++ I I GDDCI+
Sbjct: 27374 KSINSKMGHLNFFSVQHFDITRVNIKAPGDSPNTDGIKIGSSNHMKIHHVDIATGDDCIA 27553
Query: 784 IGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDS 605
I G+ + I+ V CGPGHGISVGSLG++K EK V+ + V GT+NG+RIK++
Sbjct: 27554 ILSGTFNLDINKVNCGPGHGISVGSLGKFKGEKSVQGLIVRNSIFNGTSNGVRIKTWPSP 27733
Query: 604 KSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNIC 500
S FL++ + M +V PI IDQ+YCPN C
Sbjct: 27734 GEPNLVSNFLFKNLQMIDVQSPINIDQRYCPNPPC 27838
Score = 73.9 bits (155), Expect(3) = 5e-086
Identities = 30/73 (41%), Positives = 43/73 (58%)
Frame = -3 / +2
Query: 484 SKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNGSGNKTMAVCKNAI 305
SK+ + DV F+NI GTS EA+ L C+ N+PC+ VQL N++I + G +VC+N
Sbjct: 27929 SKIQIRDVKFQNIWGTSTAKEAVKLQCSKNVPCKNVQLFNINIVHRGRDGPATSVCENVG 28108
Query: 304 GKSIGLAKELACI 266
G G +CI
Sbjct: 28109 GWIGGKISPPSCI 28147
Score = 56.5 bits (117), Expect(3) = 5e-086
Identities = 22/57 (38%), Positives = 34/57 (59%)
Frame = -3 / +2
Query: 1306 KAWKNACEATGVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNLLGTGDLSAYQRN 1136
KAWK+AC+ G+ ++ IP G + G + GPCKS I + G LL D +A +++
Sbjct: 27029 KAWKDACQWKGLPRVYIPFGTFYLGAVAFTGPCKSRISFIIKGTLLAPKDPNAIKQD 27199
>gb|AC013430.5|AC013430 Genomic sequence for Arabidopsis thaliana BAC F3F9 from chromosome I,
complete sequence
Length = 95769
Score = 230 bits (497), Expect(3) = 5e-086
Identities = 96/215 (44%), Positives = 136/215 (63%)
Frame = -3 / +2
Query: 1144 QRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILPNSLVLDFVTNVQIRGI 965
Q +WI V+ L+++G G +DGQG+ W N C+ ++NC+ LP ++ FV ++ I
Sbjct: 27194 QDSWIIFRYVDYLTVSGGGILDGQGSYSWPLNNCRQTHNCRALPMNMGFQFVRFSRLTRI 27373
Query: 964 TLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVGDDCIS 785
+NSK HLN F ++ I +V +KAPGDSPNTDGI IG S+++ I I GDDCI+
Sbjct: 27374 KSINSKMGHLNFFSVQHFDITRVNIKAPGDSPNTDGIKIGSSNHMKIHHVDIATGDDCIA 27553
Query: 784 IGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDS 605
I G+ + I+ V CGPGHGISVGSLG++K EK V+ + V GT+NG+RIK++
Sbjct: 27554 ILSGTFNLDINKVNCGPGHGISVGSLGKFKGEKSVQGLIVRNSIFNGTSNGVRIKTWPSP 27733
Query: 604 KSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNIC 500
S FL++ + M +V PI IDQ+YCPN C
Sbjct: 27734 GEPNLVSNFLFKNLQMIDVQSPINIDQRYCPNPPC 27838
Score = 73.9 bits (155), Expect(3) = 5e-086
Identities = 30/73 (41%), Positives = 43/73 (58%)
Frame = -3 / +2
Query: 484 SKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNGSGNKTMAVCKNAI 305
SK+ + DV F+NI GTS EA+ L C+ N+PC+ VQL N++I + G +VC+N
Sbjct: 27929 SKIQIRDVKFQNIWGTSTAKEAVKLQCSKNVPCKNVQLFNINIVHRGRDGPATSVCENVG 28108
Query: 304 GKSIGLAKELACI 266
G G +CI
Sbjct: 28109 GWIGGKISPPSCI 28147
Score = 56.5 bits (117), Expect(3) = 5e-086
Identities = 22/57 (38%), Positives = 34/57 (59%)
Frame = -3 / +2
Query: 1306 KAWKNACEATGVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNLLGTGDLSAYQRN 1136
KAWK+AC+ G+ ++ IP G + G + GPCKS I + G LL D +A +++
Sbjct: 27029 KAWKDACQWKGLPRVYIPFGTFYLGAVAFTGPCKSRISFIIKGTLLAPKDPNAIKQD 27199
>emb|BX823616.1|CNS0A4Y3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS57ZE12 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1644
Score = 165 bits (354), Expect(6) = 2e-084
Identities = 65/136 (47%), Positives = 91/136 (66%)
Frame = -3 / +2
Query: 991 VTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTT 812
+TN +I IT NSK FH+NI CKN+ + + + AP +S NTDGIHIG S+ V +
Sbjct: 668 LTNSKINSITSTNSKLFHMNILNCKNITLTDIGIDAPPESLNTDGIHIGRSNGVNLIGAK 847
Query: 811 IGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNG 632
I GDDC+SIG G++ + + V+CGPGHGIS+GSLGRY +E+ V+ V V C I T NG
Sbjct: 848 IKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNG 1027
Query: 631 LRIKSYEDSKSSLKAS 584
+RIK++ S + ++
Sbjct: 1028 VRIKTWPGSPPGIASN 1075
Score = 105 bits (224), Expect(6) = 2e-084
Identities = 41/93 (44%), Positives = 58/93 (62%)
Frame = -3 / +2
Query: 589 ASKFLYEGITMDNVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITL 410
AS L+E ITMDNVS P++IDQ+YCP C SKV ++DV KNI GTS T A+ L
Sbjct: 1067 ASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSKVKLSDVTIKNIKGTSATKVAVKL 1246
Query: 409 NCANNLPCQGVQLVNVDIKYNGSGNKTMAVCKN 311
C+ +PC + L ++++ +NG ++ C N
Sbjct: 1247 MCSKGVPCTNIALSDINLVHNGKEGPAVSACSN 1345
Score = 43.7 bits (89), Expect(6) = 2e-084
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -3 / +2
Query: 1264 IVIPPGNYLTGGLELKGPCKSSIIIRLDGN 1175
I +P G YL LE KGPCK + + L+GN
Sbjct: 389 ITVPKGEYLVESLEFKGPCKGPVTLELNGN 478
Score = 42.8 bits (87), Expect(6) = 2e-084
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = -3 / +2
Query: 1369 LDIAQLGAKGDGKSDSTPMILKAWKNACEA 1280
LD+ GAKGDGK+D + AWK AC A
Sbjct: 290 LDVKASGAKGDGKTDDSAAFAAAWKEACAA 379
Score = 28.6 bits (56), Expect(6) = 2e-084
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3 / +1
Query: 1081 DGQGALVWSKNQCQHSYNCKI 1019
DGQG+L W N C + N +
Sbjct: 580 DGQGSLAWKANDCAKTGNATL 642
Score = 24.4 bits (47), Expect(6) = 2e-084
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = -3 / +1
Query: 1135 WIEIENVENLSINGHGTI 1082
WI+ EN+ + ++NG+ I
Sbjct: 523 WIDFENLADFTLNGNEAI 576
>emb|BX819999.1|CNS0AA2M Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS59ZH05 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1532
Score = 261 bits (565), Expect(3) = 6e-084
Identities = 108/219 (49%), Positives = 144/219 (65%)
Frame = -3 / +2
Query: 1144 QRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILPNSLVLDFVTNVQIRGI 965
Q WI + V+NL++ G G +DGQG+ W N C + NC+ L ++ FV + +I G+
Sbjct: 347 QEEWILFKYVDNLTVTGGGLLDGQGSYSWPLNDCNKNTNCRTLAMNIGFAFVKSSKINGL 526
Query: 964 TLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVGDDCIS 785
+NSK H N+F ++ I VT+ PGDSPNTDGI IG SS++ I + TIG GDDCI+
Sbjct: 527 RSINSKMGHFNLFSVEDFDITGVTITTPGDSPNTDGIKIGKSSHMQIYNVTIGTGDDCIA 706
Query: 784 IGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDS 605
I G+ + I V+CGPGHGISVGSLGRYK+EK+V+ + V I GTT+GLRIK++ S
Sbjct: 707 ILDGTSNLDISDVRCGPGHGISVGSLGRYKEEKNVQGLTVRNSIINGTTDGLRIKTWAKS 886
Query: 604 KSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNICVKSG 488
S + S FLYE I M NV PI+IDQ+YCP+ C G
Sbjct: 887 VSQISVSNFLYENIQMINVGNPIVIDQQYCPHGQCDSPG 1003
Score = 66.6 bits (139), Expect(3) = 6e-084
Identities = 30/84 (35%), Positives = 43/84 (51%)
Frame = -3 / +2
Query: 487 ASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNGSGNKTMAVCKNA 308
AS V + DV + NI GTS + EA+ + C+ PCQ V+L N+++ Y G A+C+N
Sbjct: 1010 ASHVQIKDVKYNNIWGTSTSKEALKMQCSKTFPCQDVELSNINLHYVGRDGLVTALCENV 1189
Query: 307 IGKSIGLAKELACI*TN*LTCIYY 236
G G C + L C Y
Sbjct: 1190 GGSIRGKIVPANCRV*SLLDCSIY 1261
Score = 25.8 bits (50), Expect(3) = 6e-084
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3 / +2
Query: 1240 LTGGLELKGPCKSSIIIRLDGNLL 1169
++ + GPCKSSI + G LL
Sbjct: 248 ISSQVTFSGPCKSSITFFIRGTLL 319
>dbj|AB023039.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MIF21
Length = 59372
Score = 222 bits (479), Expect(4) = 3e-079
Identities = 89/184 (48%), Positives = 124/184 (67%)
Frame = -3 / -2
Query: 1021 ILPNSLVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGD 842
IL S+ DFVT+ +IRGIT L++K FH+N+ KNV + V + AP +SPNTDGIH+G
Sbjct: 11455 ILEQSIRFDFVTDAKIRGITSLDAKHFHINVIGAKNVTFEDVKIIAPAESPNTDGIHVGR 11276
Query: 841 SSNVTISSTTIGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVT 662
S + I ++ I GDDC+S+G G K + + V CGPGHGIS+GSLGRY E++V +++
Sbjct: 11275 SDGIKIINSFISTGDDCVSVGDGMKNLLVERVTCGPGHGISIGSLGRYSHEENVSGIKII 11096
Query: 661 GCTIAGTTNGLRIKSYEDSKSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNICVKSGAS 482
CT+ T NGLRIK++ + + AS +E I + NVS PI+IDQ+YCP N C K +
Sbjct: 11095 NCTLQETDNGLRIKTWPSAACTTTASDIHFENILLKNVSNPILIDQEYCPWNQCNKQVRT 10916
Query: 481 KVAV 470
K A+
Sbjct: 10915 KHAL 10904
Score = 59.7 bits (124), Expect(4) = 3e-079
Identities = 24/72 (33%), Positives = 38/72 (52%)
Frame = -3 / -3
Query: 484 SKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNGSGNKTMAVCKNAI 305
S + + ++ FK I GTS +A+ L C+ PCQ V++ +V+I+Y G+ C N
Sbjct: 10767 STIKLANISFKKIRGTSGNKDAVKLLCSKGYPCQNVEVGDVNIQYTGADGPATFQCSNVS 10588
Query: 304 GKSIGLAKELAC 269
K +G AC
Sbjct: 10587 PKLVGTQIPKAC 10552
Score = 54.2 bits (112), Expect(4) = 3e-079
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = -3 / -3
Query: 1144 QRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILP 1013
+ W+ N+ +NG G DG+G W N C ++NCK LP
Sbjct: 11658 KEKWVAFRNINGFKLNGGGVFDGEGNAAWRVNNCHKTFNCKKLP 11527
Score = 46.9 bits (96), Expect(4) = 3e-079
Identities = 19/58 (32%), Positives = 32/58 (55%)
Frame = -3 / -3
Query: 1312 ILKAWKNACEATGVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNLLGTGDLSAYQR 1139
+LKA+ AC+ ++IP G Y G + + GPCK+ I I L G + G+ + ++
Sbjct: 11823 LLKAFNEACQFPTKSTVMIPKGEYKLGEIVMMGPCKAPIRIALLGTVKADGNANGKEK 11650
>ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complete sequence
Length = 23470805
Score = 221 bits (477), Expect = 5e-056
Identities = 90/176 (51%), Positives = 119/176 (67%)
Frame = -3 / -1
Query: 1021 ILPNSLVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGD 842
+L S+ DFV N +IR I+ +++K FH+N+ KN+ D V V AP +SPNTDGIH+G
Sbjct: 2502899 LLLQSIRFDFVENAEIRDISSIDAKNFHINVLGAKNMTFDNVKVIAPAESPNTDGIHLGR 2502720
Query: 841 SSNVTISSTTIGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVT 662
S V I ++ I GDDCIS+G G K + + V CGPGHGISVGSLGRY E+DV + V
Sbjct: 2502719 SEGVKILNSKIATGDDCISVGDGMKNLHVENVMCGPGHGISVGSLGRYVHEQDVTGITVV 2502540
Query: 661 GCTIAGTTNGLRIKSYEDSKSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNICVK 494
CT+ GT NGLRIK++ + + AS +E I ++NVS PI+IDQ+YCP N C K
Sbjct: 2502539 NCTLQGTDNGLRIKTWPSAACATTASGIHFENIILNNVSNPILIDQEYCPWNQCNK 2502372
Score = 215 bits (465), Expect = 2e-054
Identities = 87/172 (50%), Positives = 117/172 (68%)
Frame = -3 / -3
Query: 1009 SLVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNV 830
S+ DFVTN +IR I+ +++K FH+N+ KN+ D V + AP +SPNTDGIH+G S V
Sbjct: 2500356 SIRFDFVTNAEIRDISSIDAKNFHINVIGAKNMTFDNVKIMAPAESPNTDGIHLGRSVGV 2500177
Query: 829 TISSTTIGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTI 650
+I ++ I GDDC+S+G G + + V CGPGHGISVGSLGRY E+DV ++V CT+
Sbjct: 2500176 SIINSRISTGDDCVSVGDGMVNLLVKNVVCGPGHGISVGSLGRYGHEQDVSGIRVINCTL 2499997
Query: 649 AGTTNGLRIKSYEDSKSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNICVK 494
T NGLRIK++ + S AS +E I + NVS PI+IDQ+YCP N C K
Sbjct: 2499996 QETDNGLRIKTWPSAACSTTASNIHFENIILRNVSNPILIDQEYCPWNQCNK 2499841
Score = 211 bits (455), Expect(2) = 4e-078
Identities = 85/172 (49%), Positives = 117/172 (68%)
Frame = -3 / -3
Query: 1009 SLVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNV 830
S+ DF+ N +IR I+ +++K FH+N+ KN+ ++ + + AP DSPNTDGIH+G S V
Sbjct: 2497446 SIRFDFILNSEIRDISSIDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGV 2497267
Query: 829 TISSTTIGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTI 650
I ++ I GDDCIS+G G K + + V CGPGHGISVGSLGRY E+DV ++V CT+
Sbjct: 2497266 KILNSFISTGDDCISVGDGMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTL 2497087
Query: 649 AGTTNGLRIKSYEDSKSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNICVK 494
T NGLRIK++ + S AS +E I + +VS PI+IDQ+YCP N C K
Sbjct: 2497086 QETDNGLRIKTWPSAACSTTASDIHFEDIILKDVSNPILIDQEYCPWNQCNK 2496931
Score = 165 bits (355), Expect = 3e-039
Identities = 65/136 (47%), Positives = 91/136 (66%)
Frame = -3 / -2
Query: 991 VTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTT 812
+TN +I IT NSK FH+NI CKN+ + + + AP +S NTDGIHIG S+ V +
Sbjct: 2506672 LTNSKINSITSTNSKLFHMNILNCKNITLSDIGIDAPPESLNTDGIHIGRSNGVNLIGAK 2506493
Query: 811 IGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNG 632
I GDDC+SIG G++ + + V+CGPGHGIS+GSLGRY +E+ V+ V V C I T NG
Sbjct: 2506492 IKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNG 2506313
Query: 631 LRIKSYEDSKSSLKAS 584
+RIK++ S + ++
Sbjct: 2506312 VRIKTWPGSPPGIASN 2506265
Score = 165 bits (354), Expect = 4e-039
Identities = 65/136 (47%), Positives = 91/136 (66%)
Frame = -3 / -1
Query: 991 VTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTT 812
+TN +I IT NSK FH+NI CKN+ + + + AP +S NTDGIHIG S+ V +
Sbjct: 4649453 LTNSKINSITSTNSKLFHMNILNCKNITLTDIGIDAPPESLNTDGIHIGRSNGVNLIGAK 4649274
Query: 811 IGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNG 632
I GDDC+SIG G++ + + V+CGPGHGIS+GSLGRY +E+ V+ V V C I T NG
Sbjct: 4649273 IKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNG 4649094
Query: 631 LRIKSYEDSKSSLKAS 584
+RIK++ S + ++
Sbjct: 4649093 VRIKTWPGSPPGIASN 4649046
Score = 123 bits (263), Expect = 2e-026
Identities = 50/88 (56%), Positives = 62/88 (70%)
Frame = -3 / -1
Query: 985 NVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIG 806
NV I G+T LNS+ FH+ I C NV +D V V A G+SPNTDGIH+ SS V+I ++ I
Sbjct: 22121588 NVVISGLTSLNSQMFHVAINGCSNVKLDGVKVSADGNSPNTDGIHVQSSSTVSILNSKIS 22121409
Query: 805 VGDDCISIGPGSKMIRIHGVKCGPGHGI 722
GDDC+SIGPG+ + I V CGPGHGI
Sbjct: 22121408 TGDDCVSIGPGTNGLWIENVACGPGHGI 22121325
Score = 104 bits (221), Expect(2) = 4e-078
Identities = 36/106 (33%), Positives = 60/106 (56%)
Frame = -3 / -2
Query: 1330 SDSTPMILKAWKNACEATGVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNLLGTGDLS 1151
+D +LKA+ +AC+++ K+VIP G + G +E++GPCK+ I + L G + G+
Sbjct: 2497843 TDDMQALLKAFTSACQSSSPSKVVIPKGEFKLGEIEMRGPCKAPIEVTLQGTVKADGNAI 2497664
Query: 1150 AYQRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILP 1013
+ W+ N++ +NG G DG+G W N C ++ CK LP
Sbjct: 2497663 QGKEKWVVFGNIDGFKLNGGGAFDGEGNAAWRVNNCHKTFECKKLP 2497526
>dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complete sequence
Length = 23403063
Score = 221 bits (477), Expect = 5e-056
Identities = 90/176 (51%), Positives = 119/176 (67%)
Frame = -3 / -1
Query: 1021 ILPNSLVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGD 842
+L S+ DFV N +IR I+ +++K FH+N+ KN+ D V V AP +SPNTDGIH+G
Sbjct: 2498874 LLLQSIRFDFVENAEIRDISSIDAKNFHINVLGAKNMTFDNVKVIAPAESPNTDGIHLGR 2498695
Query: 841 SSNVTISSTTIGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVT 662
S V I ++ I GDDCIS+G G K + + V CGPGHGISVGSLGRY E+DV + V
Sbjct: 2498694 SEGVKILNSKIATGDDCISVGDGMKNLHVENVMCGPGHGISVGSLGRYVHEQDVTGITVV 2498515
Query: 661 GCTIAGTTNGLRIKSYEDSKSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNICVK 494
CT+ GT NGLRIK++ + + AS +E I ++NVS PI+IDQ+YCP N C K
Sbjct: 2498514 NCTLQGTDNGLRIKTWPSAACATTASGIHFENIILNNVSNPILIDQEYCPWNQCNK 2498347
Score = 215 bits (465), Expect = 2e-054
Identities = 87/172 (50%), Positives = 117/172 (68%)
Frame = -3 / -3
Query: 1009 SLVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNV 830
S+ DFVTN +IR I+ +++K FH+N+ KN+ D V + AP +SPNTDGIH+G S V
Sbjct: 2496331 SIRFDFVTNAEIRDISSIDAKNFHINVIGAKNMTFDNVKIMAPAESPNTDGIHLGRSVGV 2496152
Query: 829 TISSTTIGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTI 650
+I ++ I GDDC+S+G G + + V CGPGHGISVGSLGRY E+DV ++V CT+
Sbjct: 2496151 SIINSRISTGDDCVSVGDGMVNLLVKNVVCGPGHGISVGSLGRYGHEQDVSGIRVINCTL 2495972
Query: 649 AGTTNGLRIKSYEDSKSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNICVK 494
T NGLRIK++ + S AS +E I + NVS PI+IDQ+YCP N C K
Sbjct: 2495971 QETDNGLRIKTWPSAACSTTASNIHFENIILRNVSNPILIDQEYCPWNQCNK 2495816
Score = 211 bits (455), Expect(2) = 4e-078
Identities = 85/172 (49%), Positives = 117/172 (68%)
Frame = -3 / -3
Query: 1009 SLVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNV 830
S+ DF+ N +IR I+ +++K FH+N+ KN+ ++ + + AP DSPNTDGIH+G S V
Sbjct: 2493421 SIRFDFILNSEIRDISSIDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGV 2493242
Query: 829 TISSTTIGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTI 650
I ++ I GDDCIS+G G K + + V CGPGHGISVGSLGRY E+DV ++V CT+
Sbjct: 2493241 KILNSFISTGDDCISVGDGMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTL 2493062
Query: 649 AGTTNGLRIKSYEDSKSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNICVK 494
T NGLRIK++ + S AS +E I + +VS PI+IDQ+YCP N C K
Sbjct: 2493061 QETDNGLRIKTWPSAACSTTASDIHFEDIILKDVSNPILIDQEYCPWNQCNK 2492906
Score = 165 bits (355), Expect = 3e-039
Identities = 65/136 (47%), Positives = 91/136 (66%)
Frame = -3 / -2
Query: 991 VTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTT 812
+TN +I IT NSK FH+NI CKN+ + + + AP +S NTDGIHIG S+ V +
Sbjct: 2502647 LTNSKINSITSTNSKLFHMNILNCKNITLSDIGIDAPPESLNTDGIHIGRSNGVNLIGAK 2502468
Query: 811 IGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNG 632
I GDDC+SIG G++ + + V+CGPGHGIS+GSLGRY +E+ V+ V V C I T NG
Sbjct: 2502467 IKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNG 2502288
Query: 631 LRIKSYEDSKSSLKAS 584
+RIK++ S + ++
Sbjct: 2502287 VRIKTWPGSPPGIASN 2502240
Score = 165 bits (354), Expect = 4e-039
Identities = 65/136 (47%), Positives = 91/136 (66%)
Frame = -3 / -2
Query: 991 VTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTT 812
+TN +I IT NSK FH+NI CKN+ + + + AP +S NTDGIHIG S+ V +
Sbjct: 4640819 LTNSKINSITSTNSKLFHMNILNCKNITLTDIGIDAPPESLNTDGIHIGRSNGVNLIGAK 4640640
Query: 811 IGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNG 632
I GDDC+SIG G++ + + V+CGPGHGIS+GSLGRY +E+ V+ V V C I T NG
Sbjct: 4640639 IKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNG 4640460
Query: 631 LRIKSYEDSKSSLKAS 584
+RIK++ S + ++
Sbjct: 4640459 VRIKTWPGSPPGIASN 4640412
Score = 123 bits (263), Expect = 2e-026
Identities = 50/88 (56%), Positives = 62/88 (70%)
Frame = -3 / -2
Query: 985 NVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIG 806
NV I G+T LNS+ FH+ I C NV +D V V A G+SPNTDGIH+ SS V+I ++ I
Sbjct: 22068887 NVVISGLTSLNSQMFHVAINGCSNVKLDGVKVSADGNSPNTDGIHVQSSSTVSILNSKIS 22068708
Query: 805 VGDDCISIGPGSKMIRIHGVKCGPGHGI 722
GDDC+SIGPG+ + I V CGPGHGI
Sbjct: 22068707 TGDDCVSIGPGTNGLWIENVACGPGHGI 22068624
Score = 104 bits (221), Expect(2) = 4e-078
Identities = 36/106 (33%), Positives = 60/106 (56%)
Frame = -3 / -2
Query: 1330 SDSTPMILKAWKNACEATGVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNLLGTGDLS 1151
+D +LKA+ +AC+++ K+VIP G + G +E++GPCK+ I + L G + G+
Sbjct: 2493818 TDDMQALLKAFTSACQSSSPSKVVIPKGEFKLGEIEMRGPCKAPIEVTLQGTVKADGNAI 2493639
Query: 1150 AYQRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILP 1013
+ W+ N++ +NG G DG+G W N C ++ CK LP
Sbjct: 2493638 QGKEKWVVFGNIDGFKLNGGGAFDGEGNAAWRVNNCHKTFECKKLP 2493501
>gb|AC026757.12|AC026757 Arabidopsis thaliana chromosome 1 BAC F2H10 genomic sequence, complete
sequence
Length = 95870
Score = 214 bits (461), Expect(4) = 8e-076
Identities = 92/165 (55%), Positives = 112/165 (67%)
Frame = -3 / -2
Query: 994 FVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISST 815
FV N +I+ IT LNSK H N F I VT+ APGDSPNTDGI +G SN+ IS+T
Sbjct: 81028 FVNNSRIKDITSLNSKMGHFNFFSVHRFNITGVTITAPGDSPNTDGIKMGSCSNIHISNT 80849
Query: 814 TIGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTN 635
IG GDDCI+I G+ + I VKCGPGHGISVGSLG+ KDEKDV+ + V GT++
Sbjct: 80848 NIGTGDDCIAILSGTTNLDISNVKCGPGHGISVGSLGKNKDEKDVKHLTVRDTVFNGTSD 80669
Query: 634 GLRIKSYEDSKSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNIC 500
G+RIK++E S S L S F+YE I M +V PI IDQKYCP+ C
Sbjct: 80668 GIRIKTWESSASKLVVSNFIYENIQMIDVGKPINIDQKYCPHPPC 80534
Score = 214 bits (461), Expect(4) = 1e-075
Identities = 92/165 (55%), Positives = 112/165 (67%)
Frame = -3 / -1
Query: 994 FVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISST 815
FV N +I+ IT LNSK H N F I VT+ APGDSPNTDGI +G SN+ IS+T
Sbjct: 84350 FVNNSRIKDITSLNSKMGHFNFFSVHRFNITGVTITAPGDSPNTDGIKMGSCSNIHISNT 84171
Query: 814 TIGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTN 635
IG GDDCI+I G+ + I VKCGPGHGISVGSLG+ KDEKDV+ + V GT++
Sbjct: 84170 NIGTGDDCIAILSGTTNLDISNVKCGPGHGISVGSLGKNKDEKDVKHLTVRDTVFNGTSD 83991
Query: 634 GLRIKSYEDSKSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNIC 500
G+RIK++E S S L S F+YE I M +V PI IDQKYCP+ C
Sbjct: 83990 GIRIKTWESSASKLVVSNFIYENIQMIDVGKPINIDQKYCPHPPC 83856
Score = 212 bits (458), Expect(4) = 2e-075
Identities = 90/165 (54%), Positives = 112/165 (67%)
Frame = -3 / -3
Query: 994 FVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISST 815
FV N +I+ IT LNSK H N F I VT+ APGDSPNTDGI +G SN+ IS+T
Sbjct: 77706 FVNNSRIKDITSLNSKMGHFNFFSVHRFNITGVTITAPGDSPNTDGIKMGSCSNIHISNT 77527
Query: 814 TIGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTN 635
IG GDDCI+I G+ + I +KCGPGHGISVGSLG+ KDEKDV+ + V GT++
Sbjct: 77526 NIGTGDDCIAILSGTTNLDISNIKCGPGHGISVGSLGKNKDEKDVKHLTVRDTVFNGTSD 77347
Query: 634 GLRIKSYEDSKSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNIC 500
G+RIK++E S S + S F+YE I M +V PI IDQKYCP+ C
Sbjct: 77346 GIRIKTWESSASKIVVSNFIYENIQMIDVGKPINIDQKYCPHPPC 77212
Score = 209 bits (451), Expect(3) = 2e-066
Identities = 89/165 (53%), Positives = 111/165 (67%)
Frame = -3 / -2
Query: 994 FVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISST 815
FV N +++ IT LNSK H N F I VT+ APGDSPNTDGI +G SN+ IS+T
Sbjct: 87691 FVNNSRMKDITSLNSKMGHFNFFSVHRFNITGVTITAPGDSPNTDGIKMGSCSNIHISNT 87512
Query: 814 TIGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTN 635
IG GDDCI+I G+ + I VKCGPGHGISVG LG+ KDEKDV+ + V GT++
Sbjct: 87511 NIGTGDDCIAILSGTTNLDISNVKCGPGHGISVGRLGKNKDEKDVKHLTVRDTVFNGTSD 87332
Query: 634 GLRIKSYEDSKSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNIC 500
G+RIK++E S S + S F+YE I M +V PI IDQKYCP+ C
Sbjct: 87331 GIRIKTWESSASKIVVSNFIYENIQMIDVGKPINIDQKYCPHPPC 87197
Score = 158 bits (340), Expect(3) = 2e-045
Identities = 68/127 (53%), Positives = 86/127 (67%)
Frame = -3 / -3
Query: 880 GDSPNTDGIHIGDSSNVTISSTTIGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGR 701
GDSPNTD I +G SN+ IS+T IG DDCI I G+ + I VKCG HGISVGSLG+
Sbjct: 49434 GDSPNTDSIKMGSCSNIHISNTNIGTRDDCIVILSGTTNLDISNVKCGSVHGISVGSLGK 49255
Query: 700 YKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDSKSSLKASKFLYEGITMDNVSYPIIIDQK 521
KDEKDV+ + V GT++G+RIK++E S S + + F+YE I M +V PI IDQK
Sbjct: 49254 NKDEKDVKHLTVRDTVFNGTSDGIRIKTWESSASIIVVTNFIYENIQMIDVGKPINIDQK 49075
Query: 520 YCPNNIC 500
YCP+ C
Sbjct: 49074 YCPHPPC 49054
Score = 60.6 bits (126), Expect(4) = 2e-075
Identities = 20/49 (40%), Positives = 34/49 (69%)
Frame = -3 / -2
Query: 490 GASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNG 344
G S V + D+ KNI+GTSN A+ L C+ + PC+ V+L+++++K+ G
Sbjct: 77104 GESHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCKNVELIDINLKHTG 76958
Score = 60.6 bits (126), Expect(4) = 8e-076
Identities = 20/49 (40%), Positives = 34/49 (69%)
Frame = -3 / -1
Query: 490 GASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNG 344
G S V + D+ KNI+GTSN A+ L C+ + PC+ V+L+++++K+ G
Sbjct: 80426 GKSHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCKNVELIDINLKHTG 80280
Score = 60.6 bits (126), Expect(4) = 1e-075
Identities = 20/49 (40%), Positives = 34/49 (69%)
Frame = -3 / -3
Query: 490 GASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNG 344
G S V + D+ KNI+GTSN A+ L C+ + PC+ V+L+++++K+ G
Sbjct: 83748 GKSHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCKNVELIDINLKHTG 83602
Score = 57.9 bits (120), Expect(3) = 2e-066
Identities = 19/49 (38%), Positives = 33/49 (67%)
Frame = -3 / -1
Query: 490 GASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNG 344
G S V + D+ KNI+GTS A+ L C+ + PC+ V+L+++++K+ G
Sbjct: 48947 GESHVQIQDIKLKNIYGTSKNIMAVNLQCSKSFPCKNVELIDINLKHTG 48801
Score = 53.8 bits (111), Expect(4) = 2e-075
Identities = 19/40 (47%), Positives = 23/40 (57%)
Frame = -3 / -1
Query: 1144 QRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNC 1025
Q WI + NLSI+G GT+DGQG W N C + NC
Sbjct: 78068 QDTWINFRYINNLSISGSGTLDGQGKYSWPLNDCHKNTNC 77949
Score = 53.8 bits (111), Expect(4) = 8e-076
Identities = 19/40 (47%), Positives = 23/40 (57%)
Frame = -3 / -3
Query: 1144 QRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNC 1025
Q WI + NLSI+G GT+DGQG W N C + NC
Sbjct: 81390 QDTWINFRYINNLSISGSGTLDGQGKYSWPLNDCHKNTNC 81271
Score = 53.8 bits (111), Expect(4) = 1e-075
Identities = 19/40 (47%), Positives = 23/40 (57%)
Frame = -3 / -1
Query: 1144 QRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNC 1025
Q WI + NLSI+G GT+DGQG W N C + NC
Sbjct: 84713 QDTWINFRYINNLSISGSGTLDGQGKYSWPLNDCHKNTNC 84594
Score = 47.8 bits (98), Expect(3) = 2e-066
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = -3 / -3
Query: 1144 QRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNC 1025
Q WI + NLSI+G GT+DGQG N C + NC
Sbjct: 88050 QDTWINFRYINNLSISGSGTLDGQGKYSLPLNDCHKNTNC 87931
Score = 45.5 bits (93), Expect(3) = 2e-045
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = -3 / -2
Query: 1144 QRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYN 1028
Q WI + NLSI G GTI+GQG W N C + N
Sbjct: 49909 QDTWINF*YINNLSIFGSGTIEGQGKYFWPLNDCHKNTN 49793
Score = 45.1 bits (92), Expect(4) = 2e-075
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = -3 / -1
Query: 1279 TGVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNLL 1169
+G KI +P G + GG+E GPCK+ I +DG LL
Sbjct: 78206 SGSSKIYVPKGTFYLGGVEFVGPCKNPIEFVIDGTLL 78096
Score = 45.1 bits (92), Expect(4) = 8e-076
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = -3 / -3
Query: 1279 TGVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNLL 1169
+G KI +P G + GG+E GPCK+ I +DG LL
Sbjct: 81528 SGSSKIYVPKGTFYLGGVEFVGPCKNPIEFVIDGTLL 81418
Score = 44.6 bits (91), Expect(4) = 1e-075
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = -3 / -3
Query: 1276 GVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNLL 1169
G KI +P G + GG+E GPCK+ I +DG LL
Sbjct: 88185 GSSKIYVPKGTFYLGGVEFVGPCKNPIEFVIDGTLL 88078
Score = 40.0 bits (81), Expect(3) = 2e-045
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = -3 / -1
Query: 1279 TGVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNLL 1169
+G KI +P G + GG+E GP K+ I +DG LL
Sbjct: 84851 SGSSKIYVPKGKFYLGGVEFVGPYKNPIEFVIDGTLL 84741
>gb|AC002334.3| Arabidopsis thaliana chromosome 2 clone F25I18 map TEn5, complete
sequence
Length = 93158
Score = 143 bits (307), Expect(5) = 3e-075
Identities = 59/134 (44%), Positives = 84/134 (62%)
Frame = -3 / -2
Query: 1144 QRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILPNSLVLDFVTNVQIRGI 965
Q WI + V+NL++ G G +DGQG+ W N C + NC+ L ++ FV + +I G+
Sbjct: 46732 QEEWILFKYVDNLTVTGGGLLDGQGSYSWPLNDCNKNTNCRTLAMNIGFAFVKSSKINGL 46553
Query: 964 TLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVGDDCIS 785
+NSK H N+F ++ I VT+ APGDSPNTDGI IG SS++ I + TIG GDDCI+
Sbjct: 46552 RSINSKMGHFNLFSVEDFNITGVTITAPGDSPNTDGIKIGKSSHMQIYNVTIGTGDDCIA 46373
Query: 784 IGPGSKMIRIHGVK 743
I G+ + I V+
Sbjct: 46372 ILDGTSNLDISDVR 46331
Score = 124 bits (265), Expect(5) = 3e-075
Identities = 50/86 (58%), Positives = 62/86 (72%)
Frame = -3 / -3
Query: 745 KCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDSKSSLKASKFLYEG 566
+CGPGHGISVGSLGRYK+EK+V+ + V I GTT+GLRIK++ S S + S FLYE
Sbjct: 45975 RCGPGHGISVGSLGRYKEEKNVQGLTVRNSIINGTTDGLRIKTWAKSVSQISVSNFLYEN 45796
Query: 565 ITMDNVSYPIIIDQKYCPNNICVKSG 488
I M NV PI+IDQ+YCP+ C G
Sbjct: 45795 IQMINVGNPIVIDQQYCPHGQCDSPG 45718
Score = 66.6 bits (139), Expect(5) = 3e-075
Identities = 30/84 (35%), Positives = 43/84 (51%)
Frame = -3 / -3
Query: 487 ASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNGSGNKTMAVCKNA 308
AS V + DV + NI GTS + EA+ + C+ PCQ V+L N+++ Y G A+C+N
Sbjct: 45711 ASHVQIKDVKYNNIWGTSTSKEALKMQCSKTFPCQDVELSNINLHYVGRDGLVTALCENV 45532
Query: 307 IGKSIGLAKELACI*TN*LTCIYY 236
G G C + L C Y
Sbjct: 45531 GGSIRGKIVPANCRV*SLLDCSIY 45460
Score = 31.8 bits (63), Expect(5) = 3e-075
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -3 / -2
Query: 1276 GVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNLL 1169
G + IP G + + GPCKSSI + G LL
Sbjct: 46867 GRSTVYIPSGIFYLRQVTFSGPCKSSITFFIRGTLL 46760
Score = 30.9 bits (61), Expect(5) = 3e-075
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -3 / -2
Query: 1366 DIAQLGAKGDGKSDSTPMILKAWKNACE 1283
D+ GA+ D + D+ KAW AC+
Sbjct: 46960 DVRNYGARADSQRDNAFAFTKAWNEACQ 46877
>dbj|AB019229.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MDC16
Length = 84294
Score = 165 bits (354), Expect(6) = 4e-075
Identities = 65/136 (47%), Positives = 91/136 (66%)
Frame = -3 / -2
Query: 991 VTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTT 812
+TN +I IT NSK FH+NI CKN+ + + + AP +S NTDGIHIG S+ V +
Sbjct: 74756 LTNSKINSITSTNSKLFHMNILNCKNITLTDIGIDAPPESLNTDGIHIGRSNGVNLIGAK 74577
Query: 811 IGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNG 632
I GDDC+SIG G++ + + V+CGPGHGIS+GSLGRY +E+ V+ V V C I T NG
Sbjct: 74576 IKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNG 74397
Query: 631 LRIKSYEDSKSSLKAS 584
+RIK++ S + ++
Sbjct: 74396 VRIKTWPGSPPGIASN 74349
Score = 59.7 bits (124), Expect(6) = 4e-075
Identities = 22/58 (37%), Positives = 35/58 (60%)
Frame = -3 / -2
Query: 484 SKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNGSGNKTMAVCKN 311
SKV ++DV KNI GTS T A+ L C+ +PC + L ++++ +NG ++ C N
Sbjct: 74159 SKVKLSDVTIKNIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACSN 73986
Score = 51.9 bits (107), Expect(6) = 4e-075
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = -3 / -2
Query: 589 ASKFLYEGITMDNVSYPIIIDQKYCPNNIC 500
AS L+E ITMDNVS P++IDQ+YCP C
Sbjct: 74357 ASNILFEDITMDNVSLPVLIDQEYCPYGHC 74268
Score = 43.7 bits (89), Expect(6) = 4e-075
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -3 / -1
Query: 1264 IVIPPGNYLTGGLELKGPCKSSIIIRLDGN 1175
I +P G YL LE KGPCK + + L+GN
Sbjct: 75132 ITVPKGEYLVESLEFKGPCKGPVTLELNGN 75043
Score = 33.6 bits (67), Expect(6) = 4e-075
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -3 / -1
Query: 1081 DGQGALVWSKNQCQHSYNCKILP 1013
DGQG+L W N C + C LP
Sbjct: 74940 DGQGSLAWKANDCAKTGKCNSLP 74872
Score = 24.4 bits (47), Expect(6) = 4e-075
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = -3 / -1
Query: 1135 WIEIENVENLSINGHGTI 1082
WI+ EN+ + ++NG+ I
Sbjct: 74997 WIDFENLADFTLNGNKAI 74944
>emb|AJ223189.1|ATAJ3189 Arabidopsis thaliana PGA2 gene
Length = 2946
Score = 165 bits (354), Expect(6) = 4e-075
Identities = 65/136 (47%), Positives = 91/136 (66%)
Frame = -3 / +3
Query: 991 VTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTT 812
+TN +I IT NSK FH+NI CKN+ + + + AP +S NTDGIHIG S+ V +
Sbjct: 1833 LTNSKINSITSTNSKLFHMNILNCKNITLTDIGIDAPPESLNTDGIHIGRSNGVNLIGAK 2012
Query: 811 IGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNG 632
I GDDC+SIG G++ + + V+CGPGHGIS+GSLGRY +E+ V+ V V C I T NG
Sbjct: 2013 IKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNG 2192
Query: 631 LRIKSYEDSKSSLKAS 584
+RIK++ S + ++
Sbjct: 2193 VRIKTWPGSPPGIASN 2240
Score = 59.7 bits (124), Expect(6) = 4e-075
Identities = 22/58 (37%), Positives = 35/58 (60%)
Frame = -3 / +1
Query: 484 SKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNGSGNKTMAVCKN 311
SKV ++DV KNI GTS T A+ L C+ +PC + L ++++ +NG ++ C N
Sbjct: 2428 SKVKLSDVTIKNIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACSN 2601
Score = 51.9 bits (107), Expect(6) = 4e-075
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = -3 / +3
Query: 589 ASKFLYEGITMDNVSYPIIIDQKYCPNNIC 500
AS L+E ITMDNVS P++IDQ+YCP C
Sbjct: 2232 ASNILFEDITMDNVSLPVLIDQEYCPYGHC 2321
Score = 43.7 bits (89), Expect(6) = 4e-075
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -3 / +2
Query: 1264 IVIPPGNYLTGGLELKGPCKSSIIIRLDGN 1175
I +P G YL LE KGPCK + + L+GN
Sbjct: 1457 ITVPKGEYLVESLEFKGPCKGPVTLELNGN 1546
Score = 33.6 bits (67), Expect(6) = 4e-075
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -3 / +2
Query: 1081 DGQGALVWSKNQCQHSYNCKILP 1013
DGQG+L W N C + C LP
Sbjct: 1649 DGQGSLAWKANDCAKTGKCNSLP 1717
Score = 24.4 bits (47), Expect(6) = 4e-075
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = -3 / +2
Query: 1135 WIEIENVENLSINGHGTI 1082
WI+ EN+ + ++NG+ I
Sbjct: 1592 WIDFENLADFTLNGNKAI 1645
>gb|AC006920.11| Arabidopsis thaliana chromosome 2 clone F26H6 map mi398, complete
sequence
Length = 89301
Score = 213 bits (459), Expect(4) = 4e-074
Identities = 91/165 (55%), Positives = 111/165 (67%)
Frame = -3 / -3
Query: 994 FVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISST 815
FV N I+ IT LNSK H N F + I VT+ APGDSPNTDGI +G SN+ IS T
Sbjct: 6418 FVNNSNIKDITSLNSKMGHFNFFSVHHFNITGVTITAPGDSPNTDGIKMGSCSNIQISDT 6239
Query: 814 TIGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTN 635
IG GDDCI+I G+ + I V CGPGHGISVGSLG+ KDEKDV+D+ V GT++
Sbjct: 6238 NIGTGDDCIAILSGTTNLNISNVNCGPGHGISVGSLGKSKDEKDVKDLIVRDVIFNGTSD 6059
Query: 634 GLRIKSYEDSKSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNIC 500
G+RIK++E S S + S F+YE I M +V PI IDQKYCP+ C
Sbjct: 6058 GIRIKTWESSASKILVSNFVYENIQMIDVGKPINIDQKYCPHPPC 5924
Score = 213 bits (459), Expect(4) = 4e-074
Identities = 91/165 (55%), Positives = 111/165 (67%)
Frame = -3 / -2
Query: 994 FVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISST 815
FV N I+ IT LNSK H N F + I VT+ APGDSPNTDGI +G SN+ IS T
Sbjct: 9815 FVNNSNIKDITSLNSKMGHFNFFSVHHFNITGVTITAPGDSPNTDGIKMGSCSNIQISDT 9636
Query: 814 TIGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTN 635
IG GDDCI+I G+ + I V CGPGHGISVGSLG+ KDEKDV+D+ V GT++
Sbjct: 9635 NIGTGDDCIAILSGTTNLNISNVNCGPGHGISVGSLGKNKDEKDVKDLIVRDVIFNGTSD 9456
Query: 634 GLRIKSYEDSKSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNIC 500
G+RIK++E S S + S F+YE I M +V PI IDQKYCP+ C
Sbjct: 9455 GIRIKNWESSASKILVSNFVYENIQMIDVGKPINIDQKYCPHPPC 9321
Score = 211 bits (455), Expect(4) = 6e-072
Identities = 90/165 (54%), Positives = 110/165 (66%)
Frame = -3 / -2
Query: 994 FVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISST 815
FV N I+ IT LNSK H N F + I VT+ APGDSPNTDGI +G SN+ IS T
Sbjct: 3020 FVNNSNIKDITSLNSKMGHFNFFSVHHFNITGVTITAPGDSPNTDGIKMGSCSNIQISDT 2841
Query: 814 TIGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTN 635
IG GDDCI+I G+ + I V CGPGHGISVGSLG+ KDEKD +D+ V GT++
Sbjct: 2840 NIGTGDDCIAILSGTTNLNISNVNCGPGHGISVGSLGKNKDEKDAKDLIVRDVIFNGTSD 2661
Query: 634 GLRIKSYEDSKSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNIC 500
G+RIK++E S S + S F+YE I M +V PI IDQKYCP+ C
Sbjct: 2660 GIRIKTWESSASKILVSNFVYENIQMIDVGKPINIDQKYCPHPPC 2526
Score = 56.1 bits (116), Expect(4) = 4e-074
Identities = 20/49 (40%), Positives = 32/49 (65%)
Frame = -3 / -1
Query: 490 GASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNG 344
G S V + ++ KNI+GTS A+ L C+ PC+ V+L++++IK NG
Sbjct: 5811 GESHVQIQNLKLKNIYGTSKNKVAVNLQCSKIFPCKNVELIDINIKQNG 5665
Score = 56.1 bits (116), Expect(4) = 4e-074
Identities = 20/49 (40%), Positives = 32/49 (65%)
Frame = -3 / -3
Query: 490 GASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNG 344
G S V + ++ KNI+GTS A+ L C+ PC+ V+L++++IK NG
Sbjct: 9208 GESHVQIQNLKLKNIYGTSKNKVAVNLQCSKIFPCKNVELIDINIKQNG 9062
Score = 55.1 bits (114), Expect(4) = 6e-072
Identities = 20/49 (40%), Positives = 32/49 (65%)
Frame = -3 / -3
Query: 490 GASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNG 344
G S V + ++ KNI+GTS A+ L C+ PC+ V+L++++IK NG
Sbjct: 2413 GESHVQIQNLKLKNIYGTSKNKVAMNLQCSKIFPCKNVELIDINIKQNG 2267
Score = 52.8 bits (109), Expect(4) = 6e-072
Identities = 19/40 (47%), Positives = 23/40 (57%)
Frame = -3 / -1
Query: 1144 QRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNC 1025
Q WI + NLSI+G GT+DGQG W N C + NC
Sbjct: 3378 QDTWINFRYINNLSISGSGTLDGQGKQSWPHNDCHTNPNC 3259
Score = 52.8 bits (109), Expect(4) = 4e-074
Identities = 19/40 (47%), Positives = 23/40 (57%)
Frame = -3 / -1
Query: 1144 QRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNC 1025
Q WI + NLSI+G GT+DGQG W N C + NC
Sbjct: 6774 QDTWINFRYINNLSISGSGTLDGQGKQSWPHNDCHTNPNC 6655
Score = 52.8 bits (109), Expect(4) = 4e-074
Identities = 19/40 (47%), Positives = 23/40 (57%)
Frame = -3 / -2
Query: 1144 QRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNC 1025
Q WI + NLSI+G GT+DGQG W N C + NC
Sbjct: 10172 QDTWINFRYINNLSISGSGTLDGQGKQSWPHNDCHTNPNC 10053
Score = 45.5 bits (93), Expect(4) = 4e-074
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = -3 / -1
Query: 1279 TGVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNLLGTGDLS 1151
+G KI +P G + GG+E GPCK+ I +DG LL + S
Sbjct: 6912 SGSSKIYVPKGTFYLGGVEFVGPCKNPIEFIIDGTLLAPANPS 6784
Score = 45.5 bits (93), Expect(4) = 4e-074
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = -3 / -2
Query: 1279 TGVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNLLGTGDLS 1151
+G KI +P G + GG+E GPCK+ I +DG LL + S
Sbjct: 10310 SGSSKIYVPKGTFYLGGVEFVGPCKNPIEFIIDGTLLAPANPS 10182
Score = 40.9 bits (83), Expect(4) = 6e-072
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = -3 / -1
Query: 1279 TGVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNLLGTGDLS 1151
+G KI +P G + GG+E G CK+ I +DG LL + S
Sbjct: 3516 SGSSKIYVPKGTFYLGGVEFVGLCKNPIEFIIDGTLLAPANPS 3388
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 2,035,440,154
Number of Sequences: 1013581
Number of extensions: 25061106
Number of successful extensions: 137004
Number of sequences better than 1.0e-020: 256
length of database: 302,980,290
effective HSP length: 58
effective length of database: 244,192,592
effective search space used: 111596014544
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)