TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3071418.2.1
(1432 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|NM_119681.1| Arabidopsis thaliana O-methyltransferase/ ... 116 2e-030
ref|NM_119682.3| Arabidopsis thaliana O-methyltransferase/ ... 118 6e-029
gb|AY099803.1| Arabidopsis thaliana O-methyltransferase-lik... 118 6e-029
gb|BT000302.1| Arabidopsis thaliana O-methyltransferase-lik... 118 6e-029
emb|AX507887.1| Sequence 2582 from Patent WO0216655 118 6e-029
emb|CQ806040.1| Sequence 2451 from Patent WO2004035798 118 6e-029
>ref|NM_119681.1| Arabidopsis thaliana O-methyltransferase/
S-adenosylmethionine-dependent methyltransferase/
methyltransferase AT4G35150 mRNA, complete cds
Length = 978
Score = 116 bits (248), Expect(3) = 2e-030
Identities = 50/116 (43%), Positives = 69/116 (59%)
Frame = -1 / +1
Query: 790 LLNKGMAADSRFLMPIVLRECGETFRGIDSLVDVXXXXXXXXXXXXXAFPHLKCSVLDLP 611
L+N+ MA D+R ++P V C F G+ ++VDV FP +K DLP
Sbjct: 379 LINEAMACDARRVVPRVAGACQGLFDGVATVVDVGGGTGETMGILVKEFPWIKGFNFDLP 558
Query: 610 HVVAGAPSDGNVQFVAGNMFESIPPATAVFLKKTLHDWGDDECVKILKNCKQAISP 443
HV+ A V+ V G+MF+SIP + AV +K LHDWGD +C+KILKNCK+A+ P
Sbjct: 559 HVIEVAQVLDGVENVEGDMFDSIPASDAVIIKWVLHDWGDKDCIKILKNCKEAVLP 726
Score = 34.1 bits (68), Expect(3) = 2e-030
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = -1 / +1
Query: 394 KQSNIKHQETQVMFDLYMMAVNGVERDEQEWKKIFTEAGFKDYKI 260
+ ++H Q+ + + G ER +EW + TEAGF Y++
Sbjct: 796 RDDKLEHVRLQLDMVMMVHTSTGKERTLKEWDFVLTEAGFARYEV 930
Score = 23.1 bits (44), Expect(3) = 2e-030
Identities = 8/21 (38%), Positives = 16/21 (76%)
Frame = -1 / +1
Query: 430 GKVIILDVVVGYKQSNIKHQE 368
GKV+I++ V+G K++ + +E
Sbjct: 733 GKVLIVECVIGEKKNTMIAEE 795
>ref|NM_119682.3| Arabidopsis thaliana O-methyltransferase/
S-adenosylmethionine-dependent methyltransferase
AT4G35160 mRNA, complete cds
Length = 1381
Score = 118 bits (253), Expect(2) = 6e-029
Identities = 49/116 (42%), Positives = 69/116 (59%)
Frame = -1 / +1
Query: 790 LLNKGMAADSRFLMPIVLRECGETFRGIDSLVDVXXXXXXXXXXXXXAFPHLKCSVLDLP 611
++N+ MA D+R ++P V C F G+ ++VDV FP +K DLP
Sbjct: 553 MINEAMACDARRVVPRVAGACHGLFDGVTTMVDVGGGTGETMGMLVKEFPWIKGFNFDLP 732
Query: 610 HVVAGAPSDGNVQFVAGNMFESIPPATAVFLKKTLHDWGDDECVKILKNCKQAISP 443
HV+ A V+ V G+MF+SIP A+F+K LHDWGD +C+KILKNCK+A+ P
Sbjct: 733 HVIEVAEVLDGVENVEGDMFDSIPACDAIFIKWVLHDWGDKDCIKILKNCKEAVPP 900
Score = 32.2 bits (64), Expect(2) = 6e-029
Identities = 15/61 (24%), Positives = 28/61 (45%)
Frame = -1 / +1
Query: 409 VVVGYKQSNIKHQETQVMFDLYMMAVNGVERDEQEWKKIFTEAGFKDYKILPVIGDVSVI 230
++V + ++H + + G ER +EW + EAGF Y++ + S+I
Sbjct: 955 MIVDERDEKLEHVRLMLDMVMMAHTSTGKERTLKEWDFVLKEAGFARYEVRDIDDVQSLI 1134
Query: 229 I 227
I
Sbjct: 1135 I 1137
>gb|AY099803.1| Arabidopsis thaliana O-methyltransferase-like protein (At4g35160)
mRNA, complete cds
Length = 1347
Score = 118 bits (253), Expect(2) = 6e-029
Identities = 49/116 (42%), Positives = 69/116 (59%)
Frame = -1 / +1
Query: 790 LLNKGMAADSRFLMPIVLRECGETFRGIDSLVDVXXXXXXXXXXXXXAFPHLKCSVLDLP 611
++N+ MA D+R ++P V C F G+ ++VDV FP +K DLP
Sbjct: 553 MINEAMACDARRVVPRVAGACHGLFDGVTTMVDVGGGTGETMGMLVKEFPWIKGFNFDLP 732
Query: 610 HVVAGAPSDGNVQFVAGNMFESIPPATAVFLKKTLHDWGDDECVKILKNCKQAISP 443
HV+ A V+ V G+MF+SIP A+F+K LHDWGD +C+KILKNCK+A+ P
Sbjct: 733 HVIEVAEVLDGVENVEGDMFDSIPACDAIFIKWVLHDWGDKDCIKILKNCKEAVPP 900
Score = 32.2 bits (64), Expect(2) = 6e-029
Identities = 15/61 (24%), Positives = 28/61 (45%)
Frame = -1 / +1
Query: 409 VVVGYKQSNIKHQETQVMFDLYMMAVNGVERDEQEWKKIFTEAGFKDYKILPVIGDVSVI 230
++V + ++H + + G ER +EW + EAGF Y++ + S+I
Sbjct: 955 MIVDERDEKLEHVRLMLDMVMMAHTSTGKERTLKEWDFVLKEAGFARYEVRDIDDVQSLI 1134
Query: 229 I 227
I
Sbjct: 1135 I 1137
>gb|BT000302.1| Arabidopsis thaliana O-methyltransferase-like protein (At4g35160)
mRNA, complete cds
Length = 1253
Score = 118 bits (253), Expect(2) = 6e-029
Identities = 49/116 (42%), Positives = 69/116 (59%)
Frame = -1 / +1
Query: 790 LLNKGMAADSRFLMPIVLRECGETFRGIDSLVDVXXXXXXXXXXXXXAFPHLKCSVLDLP 611
++N+ MA D+R ++P V C F G+ ++VDV FP +K DLP
Sbjct: 550 MINEAMACDARRVVPRVAGACHGLFDGVTTMVDVGGGTGETMGMLVKEFPWIKGFNFDLP 729
Query: 610 HVVAGAPSDGNVQFVAGNMFESIPPATAVFLKKTLHDWGDDECVKILKNCKQAISP 443
HV+ A V+ V G+MF+SIP A+F+K LHDWGD +C+KILKNCK+A+ P
Sbjct: 730 HVIEVAEVLDGVENVEGDMFDSIPACDAIFIKWVLHDWGDKDCIKILKNCKEAVPP 897
Score = 32.2 bits (64), Expect(2) = 6e-029
Identities = 15/61 (24%), Positives = 28/61 (45%)
Frame = -1 / +1
Query: 409 VVVGYKQSNIKHQETQVMFDLYMMAVNGVERDEQEWKKIFTEAGFKDYKILPVIGDVSVI 230
++V + ++H + + G ER +EW + EAGF Y++ + S+I
Sbjct: 952 MIVDERDEKLEHVRLMLDMVMMAHTSTGKERTLKEWDFVLKEAGFARYEVRDIDDVQSLI 1131
Query: 229 I 227
I
Sbjct: 1132 I 1134
>emb|AX507887.1| Sequence 2582 from Patent WO0216655
Length = 1149
Score = 118 bits (253), Expect(2) = 6e-029
Identities = 49/116 (42%), Positives = 69/116 (59%)
Frame = -1 / +1
Query: 790 LLNKGMAADSRFLMPIVLRECGETFRGIDSLVDVXXXXXXXXXXXXXAFPHLKCSVLDLP 611
++N+ MA D+R ++P V C F G+ ++VDV FP +K DLP
Sbjct: 550 MINEAMACDARRVVPRVAGACHGLFDGVTTMVDVGGGTGETMGMLVKEFPWIKGFNFDLP 729
Query: 610 HVVAGAPSDGNVQFVAGNMFESIPPATAVFLKKTLHDWGDDECVKILKNCKQAISP 443
HV+ A V+ V G+MF+SIP A+F+K LHDWGD +C+KILKNCK+A+ P
Sbjct: 730 HVIEVAEVLDGVENVEGDMFDSIPACDAIFIKWVLHDWGDKDCIKILKNCKEAVPP 897
Score = 32.2 bits (64), Expect(2) = 6e-029
Identities = 15/61 (24%), Positives = 28/61 (45%)
Frame = -1 / +1
Query: 409 VVVGYKQSNIKHQETQVMFDLYMMAVNGVERDEQEWKKIFTEAGFKDYKILPVIGDVSVI 230
++V + ++H + + G ER +EW + EAGF Y++ + S+I
Sbjct: 952 MIVDERDEKLEHVRLMLDMVMMAHTSTGKERTLKEWDFVLKEAGFARYEVRDIDDVQSLI 1131
Query: 229 I 227
I
Sbjct: 1132 I 1134
>emb|CQ806040.1| Sequence 2451 from Patent WO2004035798
Length = 1149
Score = 118 bits (253), Expect(2) = 6e-029
Identities = 49/116 (42%), Positives = 69/116 (59%)
Frame = -1 / +1
Query: 790 LLNKGMAADSRFLMPIVLRECGETFRGIDSLVDVXXXXXXXXXXXXXAFPHLKCSVLDLP 611
++N+ MA D+R ++P V C F G+ ++VDV FP +K DLP
Sbjct: 550 MINEAMACDARRVVPRVAGACHGLFDGVTTMVDVGGGTGETMGMLVKEFPWIKGFNFDLP 729
Query: 610 HVVAGAPSDGNVQFVAGNMFESIPPATAVFLKKTLHDWGDDECVKILKNCKQAISP 443
HV+ A V+ V G+MF+SIP A+F+K LHDWGD +C+KILKNCK+A+ P
Sbjct: 730 HVIEVAEVLDGVENVEGDMFDSIPACDAIFIKWVLHDWGDKDCIKILKNCKEAVPP 897
Score = 32.2 bits (64), Expect(2) = 6e-029
Identities = 15/61 (24%), Positives = 28/61 (45%)
Frame = -1 / +1
Query: 409 VVVGYKQSNIKHQETQVMFDLYMMAVNGVERDEQEWKKIFTEAGFKDYKILPVIGDVSVI 230
++V + ++H + + G ER +EW + EAGF Y++ + S+I
Sbjct: 952 MIVDERDEKLEHVRLMLDMVMMAHTSTGKERTLKEWDFVLKEAGFARYEVRDIDDVQSLI 1131
Query: 229 I 227
I
Sbjct: 1132 I 1134
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 2,627,462,326
Number of Sequences: 1013581
Number of extensions: 34434451
Number of successful extensions: 181363
Number of sequences better than 1.0e-020: 6
length of database: 302,980,290
effective HSP length: 58
effective length of database: 244,192,592
effective search space used: 102072503456
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)