TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3070863.2.1
(992 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AY035106.1| Arabidopsis thaliana unknown protein (At4g05... 363 5e-099
gb|AY113900.1| Arabidopsis thaliana unknown protein (At4g05... 363 5e-099
gb|AY087807.1| Arabidopsis thaliana clone 38543 mRNA, compl... 363 5e-099
emb|BX826379.1|CNS0A2B1 Arabidopsis thaliana Full-length cD... 363 5e-099
ref|NM_116791.1| Arabidopsis thaliana oxidoreductase AT4G05... 363 5e-099
gb|CK119562.1|CK119562 201h22.p1 AtM1 Arabidopsis thaliana ... 357 3e-097
gb|CK117872.1|CK117872 209m20.p1 AtM1 Arabidopsis thaliana ... 340 4e-092
gb|AV821519.1|AV821519 AV821519 RAFL4 Arabidopsis thaliana ... 292 8e-083
gb|CB254882.1|CB254882 56-E018438-019-009-O14-T7R MPIZ-ADIS... 284 4e-075
emb|AX059543.1| Sequence 276 from Patent WO0055325 80 4e-068
gb|AF147263.1|T1J24 Arabidopsis thaliana BAC T1J24 80 4e-066
emb|AL161503.2|ATCHRIV15 Arabidopsis thaliana DNA chromosom... 80 4e-065
emb|AJ270058.1| Arabidopsis thaliana DNA chromosome 4, shor... 80 2e-059
gb|AY174529.1| Arabidopsis thaliana isolate KNO10 short cha... 80 6e-053
gb|AY174530.1| Arabidopsis thaliana isolate CIBC6 short cha... 80 6e-053
gb|AY174528.1| Arabidopsis thaliana isolate PUZ16 short cha... 80 1e-052
gb|AY174531.1| Arabidopsis thaliana isolate GOT16 short cha... 80 1e-052
gb|AV782008.1|AV782008 AV782008 RAFL4 Arabidopsis thaliana ... 186 9e-046
gb|T21872.1|T21872 3880 Lambda-PRL2 Arabidopsis thaliana cD... 173 3e-045
gb|Z18000.1|Z18000 ATTS0484 AC16H Arabidopsis thaliana cDNA... 169 6e-043
gb|Z47605.1|Z47605 ATTS4461 AC16H Arabidopsis thaliana cDNA... 169 6e-043
gb|BP862826.1|BP862826 BP862826 RAFL21 Arabidopsis thaliana... 158 3e-037
gb|BP866649.1|BP866649 BP866649 RAFL21 Arabidopsis thaliana... 147 5e-034
gb|BP867954.1|BP867954 BP867954 RAFL21 Arabidopsis thaliana... 85 2e-030
gb|BP596017.1|BP596017 BP596017 RAFL15 Arabidopsis thaliana... 132 2e-029
gb|BP820249.1|BP820249 BP820249 RAFL19 Arabidopsis thaliana... 76 3e-029
gb|H36166.1|H36166 14688 Lambda-PRL2 Arabidopsis thaliana c... 124 5e-027
gb|BP861941.1|BP861941 BP861941 RAFL21 Arabidopsis thaliana... 99 2e-025
gb|B62113.1|B62113 T20H22TF TAMU Arabidopsis thaliana genom... 62 1e-024
gb|BP864362.1|BP864362 BP864362 RAFL21 Arabidopsis thaliana... 79 2e-024
gb|BP831739.1|BP831739 BP831739 RAFL19 Arabidopsis thaliana... 109 3e-024
emb|AL092247.1|CNS00VG9 Arabidopsis thaliana genome survey ... 62 1e-022
>gb|AY035106.1| Arabidopsis thaliana unknown protein (At4g05530) mRNA, complete cds
Length = 1087
Score = 363 bits (787), Expect = 5e-099
Identities = 156/249 (62%), Positives = 185/249 (74%)
Frame = +1 / +3
Query: 70 RRLEGKVAIVTASTMGIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGITAVGAV 249
RRLEGKVAIVTAST GIG I ER GLEGA+VV+SSRKQ NV+EAV L++KGI A G V
Sbjct: 69 RRLEGKVAIVTASTQGIGFGITERFGLEGASVVVSSRKQANVDEAVAKLKSKGIDAYGIV 248
Query: 250 CHVSDAQQRKSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINVKASIL 429
CHVS+AQ R++L+E V+ +G IDI+V NAAANPS D IL KE+VLDKLW+INVK+SIL
Sbjct: 249 CHVSNAQHRRNLVEKTVQKYGKIDIVVCNAAANPSTDPILSSKEAVLDKLWEINVKSSIL 428
Query: 430 LIQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTALFGLTKALAGEMGPDTRVNCI 609
L+QD APHL KG AG++P+ + MYGVTKTAL GLTKALA EM PDTRVN +
Sbjct: 429 LLQDMAPHLEKGSSVIFITSIAGFSPQGAMAMYGVTKTALLGLTKALAAEMAPDTRVNAV 608
Query: 610 APGFVPTRFASFLTENETIRKELNERTKLKRLGTVEDMXXXXXXXXXXXXXYITAETIVV 789
APGFVPT FASF+T + +R+ + E+T L RLGT DM YIT ET+VV
Sbjct: 609 APGFVPTHFASFITGSSEVREGIEEKTLLNRLGTTGDMAAAAAFLASDDSSYITGETLVV 788
Query: 790 AGGVQSRL* 816
AGG+ SRL*
Sbjct: 789 AGGMPSRL* 815
Score = 187 bits (402), Expect = 6e-046
Identities = 105/217 (48%), Positives = 117/217 (53%)
Frame = -1 / -1
Query: 812 SLDCTPPATTMVSAVMYDXXXXXXXXXXXXXXSTVPNXXXXXXXXXXXXXXXXXVRKLAN 633
SL+ PPATT VS VM + VPN V K A
Sbjct: 811 SLEGIPPATTKVSPVM*EESSDAKKAAAAAMSPVVPNLLSRVFSSIPSLTSELPVMKEAK 632
Query: 632 RVGTKPGAIQLTRVSGPISPARAFVRPKRAVFVTPYIVNPCSGL*PAIEEIIITDDPFXX 453
VGTKPGA TRVSG IS A A V P+RAV VTPYI G PAIE + IT++PF
Sbjct: 631 CVGTKPGATAFTRVSGAISAASALVSPRRAVLVTPYIAIAPCGENPAIEVMKITEEPFSR 452
Query: 452 XXXXXXXXXIEALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLTAVSMRLLR 273
IE LTLIS SLSRT S + + S +G AAAL+T IS+ P T S RL R
Sbjct: 451 *GAISCRRSIEDLTLISQSLSRTASLLDKIGSVDGLAAALQTTISIFPYF*TVFSTRLRR 272
Query: 272 CCASETWQTAPTAVIPLALSPSTASFTFFCLREEMTT 162
C A ET QT P A IPL LS +TAS TF CLREE TT
Sbjct: 271 C*ALET*QTIPYASIPLDLSFATASSTFACLREETTT 161
Score = 141 bits (302), Expect = 4e-032
Identities = 79/243 (32%), Positives = 122/243 (50%)
Frame = -3 / -3
Query: 801 HPSSNNNGFSRNV*CVVRRQKSRSRSHVFHSTQSLKLGPLVKLFPNGLIFCEETSKPCRN 622
H SS+N FS +V ++ +S SHV +Q +K L FP+ +E SK C +
Sbjct: 800 HSSSDNQSFSSDVRRII*C*ESSRSSHVSRCSQPVKQSLLFNTFPHFRATGDERSKVCGH 621
Query: 621 KTRGYTVNTSIGSHLTSKSLRETKESSLCDTIHCQSLFWIVTSXXXXXXXX*PLP*VRSS 442
KT V+T IG HL+SK L +++SS DTIH S W +S L VRS
Sbjct: 620 KTGCNCVHTCIGGHLSSKRLS*SEKSSFSDTIHSHSSLW*KSSNRSYEDNRRTLLKVRSH 441
Query: 441 ILNKKDRSLDVNIPQLIENRLFHFKYAIYRRICGSIGDKNIYVPKALDGRLDEALALLCV 262
IL +K R D++ P+L++N F + + R I S+ D +IY+P L+ D+ A+L +
Sbjct: 440 ILQEKYRGFDIDFPKLVKNSFFARQDWVCRWIGSSVTDNDIYLPIFLNRLFDKIAAMLSI 261
Query: 261 GDVADGTNRGDTLGPEPLHRLVHVXXXXXXXXXXXXLQTEALGDGEADPHRGRRHDGHLP 82
G++ D + + G E + L+++ +TE L D E +P R RH+
Sbjct: 260 GNMTDDSICINPFGFEFCYCLINICLFAGRDDDGSAFETETLSDSETNPLRRSRHNRDFA 81
Query: 81 LQT 73
Q+
Sbjct: 80 FQS 72
Score = 106 bits (226), Expect(2) = 1e-028
Identities = 52/138 (37%), Positives = 73/138 (52%)
Frame = +3 / +2
Query: 240 WCRLPRLRRTAAQEPHRDGRQELWAHRYSCLQCCRKSFCR*HT*NERVCSR*AVGY*RQG 419
W RL + + + + R E+W RY CL C +S R + +R CS A+G Q
Sbjct: 239 WNRLSCFQCSTSPQSCRKDGSEIWEDRYRCL*RCCQSIYRPNLV*QRSCS*QALGNQCQI 418
Query: 420 FYPSYSGCCSSPTEGVICDYYFFNCWLQSRTRIDNVWCHKDCSLWSHEGSCW*DGTRYSC 599
Y S +G SSP EG C + F CW+ + VWCH +CS ++ G+C *DG RY+C
Sbjct: 419 LYTSPAGYGSSP*EGFFCYLHNFYCWIFTTRSYGYVWCH*NCSSRTN*GACC*DGPRYTC 598
Query: 600 *LYSPWFCSYTVC*FPHR 653
FC++T+C F HR
Sbjct: 599 ERSCTRFCAHTLCFFHHR 652
Score = 43.2 bits (88), Expect(2) = 1e-028
Identities = 21/49 (42%), Positives = 27/49 (55%)
Frame = +3 / +2
Query: 672 RA*REDQA*EIGYCGRHGCGCGFSGV*RRIIHYG*NHCCCWRGAV*AVN 818
R *RED A*++G GRHGC F + +H+ N C WR A +N
Sbjct: 671 RY*REDSA*QVGNNGRHGCCGCFLSIR*FFLHHWRNFGCRWRNAFKTLN 817
>gb|AY113900.1| Arabidopsis thaliana unknown protein (At4g05530) mRNA, complete cds
Length = 796
Score = 363 bits (787), Expect = 5e-099
Identities = 156/249 (62%), Positives = 185/249 (74%)
Frame = +1 / +1
Query: 70 RRLEGKVAIVTASTMGIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGITAVGAV 249
RRLEGKVAIVTAST GIG I ER GLEGA+VV+SSRKQ NV+EAV L++KGI A G V
Sbjct: 19 RRLEGKVAIVTASTQGIGFGITERFGLEGASVVVSSRKQANVDEAVAKLKSKGIDAYGIV 198
Query: 250 CHVSDAQQRKSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINVKASIL 429
CHVS+AQ R++L+E V+ +G IDI+V NAAANPS D IL KE+VLDKLW+INVK+SIL
Sbjct: 199 CHVSNAQHRRNLVEKTVQKYGKIDIVVCNAAANPSTDPILSSKEAVLDKLWEINVKSSIL 378
Query: 430 LIQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTALFGLTKALAGEMGPDTRVNCI 609
L+QD APHL KG AG++P+ + MYGVTKTAL GLTKALA EM PDTRVN +
Sbjct: 379 LLQDMAPHLEKGSSVIFITSIAGFSPQGAMAMYGVTKTALLGLTKALAAEMAPDTRVNAV 558
Query: 610 APGFVPTRFASFLTENETIRKELNERTKLKRLGTVEDMXXXXXXXXXXXXXYITAETIVV 789
APGFVPT FASF+T + +R+ + E+T L RLGT DM YIT ET+VV
Sbjct: 559 APGFVPTHFASFITGSSEVREGIEEKTLLNRLGTTGDMAAAAAFLASDDSSYITGETLVV 738
Query: 790 AGGVQSRL* 816
AGG+ SRL*
Sbjct: 739 AGGMPSRL* 765
Score = 187 bits (402), Expect = 6e-046
Identities = 105/217 (48%), Positives = 117/217 (53%)
Frame = -1 / -3
Query: 812 SLDCTPPATTMVSAVMYDXXXXXXXXXXXXXXSTVPNXXXXXXXXXXXXXXXXXVRKLAN 633
SL+ PPATT VS VM + VPN V K A
Sbjct: 761 SLEGIPPATTKVSPVM*EESSDAKKAAAAAMSPVVPNLLSRVFSSIPSLTSELPVMKEAK 582
Query: 632 RVGTKPGAIQLTRVSGPISPARAFVRPKRAVFVTPYIVNPCSGL*PAIEEIIITDDPFXX 453
VGTKPGA TRVSG IS A A V P+RAV VTPYI G PAIE + IT++PF
Sbjct: 581 CVGTKPGATAFTRVSGAISAASALVSPRRAVLVTPYIAIAPCGENPAIEVMKITEEPFSR 402
Query: 452 XXXXXXXXXIEALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLTAVSMRLLR 273
IE LTLIS SLSRT S + + S +G AAAL+T IS+ P T S RL R
Sbjct: 401 *GAISCRRSIEDLTLISQSLSRTASLLDKIGSVDGLAAALQTTISIFPYF*TVFSTRLRR 222
Query: 272 CCASETWQTAPTAVIPLALSPSTASFTFFCLREEMTT 162
C A ET QT P A IPL LS +TAS TF CLREE TT
Sbjct: 221 C*ALET*QTIPYASIPLDLSFATASSTFACLREETTT 111
Score = 141 bits (302), Expect = 4e-032
Identities = 79/243 (32%), Positives = 122/243 (50%)
Frame = -3 / -2
Query: 801 HPSSNNNGFSRNV*CVVRRQKSRSRSHVFHSTQSLKLGPLVKLFPNGLIFCEETSKPCRN 622
H SS+N FS +V ++ +S SHV +Q +K L FP+ +E SK C +
Sbjct: 750 HSSSDNQSFSSDVRRII*C*ESSRSSHVSRCSQPVKQSLLFNTFPHFRATGDERSKVCGH 571
Query: 621 KTRGYTVNTSIGSHLTSKSLRETKESSLCDTIHCQSLFWIVTSXXXXXXXX*PLP*VRSS 442
KT V+T IG HL+SK L +++SS DTIH S W +S L VRS
Sbjct: 570 KTGCNCVHTCIGGHLSSKRLS*SEKSSFSDTIHSHSSLW*KSSNRSYEDNRRTLLKVRSH 391
Query: 441 ILNKKDRSLDVNIPQLIENRLFHFKYAIYRRICGSIGDKNIYVPKALDGRLDEALALLCV 262
IL +K R D++ P+L++N F + + R I S+ D +IY+P L+ D+ A+L +
Sbjct: 390 ILQEKYRGFDIDFPKLVKNSFFARQDWVCRWIGSSVTDNDIYLPIFLNRLFDKIAAMLSI 211
Query: 261 GDVADGTNRGDTLGPEPLHRLVHVXXXXXXXXXXXXLQTEALGDGEADPHRGRRHDGHLP 82
G++ D + + G E + L+++ +TE L D E +P R RH+
Sbjct: 210 GNMTDDSICINPFGFEFCYCLINICLFAGRDDDGSAFETETLSDSETNPLRRSRHNRDFA 31
Query: 81 LQT 73
Q+
Sbjct: 30 FQS 22
Score = 106 bits (226), Expect(2) = 1e-028
Identities = 52/138 (37%), Positives = 73/138 (52%)
Frame = +3 / +3
Query: 240 WCRLPRLRRTAAQEPHRDGRQELWAHRYSCLQCCRKSFCR*HT*NERVCSR*AVGY*RQG 419
W RL + + + + R E+W RY CL C +S R + +R CS A+G Q
Sbjct: 189 WNRLSCFQCSTSPQSCRKDGSEIWEDRYRCL*RCCQSIYRPNLV*QRSCS*QALGNQCQI 368
Query: 420 FYPSYSGCCSSPTEGVICDYYFFNCWLQSRTRIDNVWCHKDCSLWSHEGSCW*DGTRYSC 599
Y S +G SSP EG C + F CW+ + VWCH +CS ++ G+C *DG RY+C
Sbjct: 369 LYTSPAGYGSSP*EGFFCYLHNFYCWIFTTRSYGYVWCH*NCSSRTN*GACC*DGPRYTC 548
Query: 600 *LYSPWFCSYTVC*FPHR 653
FC++T+C F HR
Sbjct: 549 ERSCTRFCAHTLCFFHHR 602
Score = 43.2 bits (88), Expect(2) = 1e-028
Identities = 21/49 (42%), Positives = 27/49 (55%)
Frame = +3 / +3
Query: 672 RA*REDQA*EIGYCGRHGCGCGFSGV*RRIIHYG*NHCCCWRGAV*AVN 818
R *RED A*++G GRHGC F + +H+ N C WR A +N
Sbjct: 621 RY*REDSA*QVGNNGRHGCCGCFLSIR*FFLHHWRNFGCRWRNAFKTLN 767
>gb|AY087807.1| Arabidopsis thaliana clone 38543 mRNA, complete sequence
Length = 1123
Score = 363 bits (787), Expect = 5e-099
Identities = 156/249 (62%), Positives = 185/249 (74%)
Frame = +1 / +2
Query: 70 RRLEGKVAIVTASTMGIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGITAVGAV 249
RRLEGKVAIVTAST GIG I ER GLEGA+VV+SSRKQ NV+EAV L++KGI A G V
Sbjct: 86 RRLEGKVAIVTASTQGIGFGITERFGLEGASVVVSSRKQANVDEAVAKLKSKGIDAYGIV 265
Query: 250 CHVSDAQQRKSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINVKASIL 429
CHVS+AQ R++L+E V+ +G IDI+V NAAANPS D IL KE+VLDKLW+INVK+SIL
Sbjct: 266 CHVSNAQHRRNLVEKTVQKYGKIDIVVCNAAANPSTDPILSSKEAVLDKLWEINVKSSIL 445
Query: 430 LIQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTALFGLTKALAGEMGPDTRVNCI 609
L+QD APHL KG AG++P+ + MYGVTKTAL GLTKALA EM PDTRVN +
Sbjct: 446 LLQDMAPHLEKGSSVIFITSIAGFSPQGAMAMYGVTKTALLGLTKALAAEMAPDTRVNAV 625
Query: 610 APGFVPTRFASFLTENETIRKELNERTKLKRLGTVEDMXXXXXXXXXXXXXYITAETIVV 789
APGFVPT FASF+T + +R+ + E+T L RLGT DM YIT ET+VV
Sbjct: 626 APGFVPTHFASFITGSSEVREGIEEKTLLNRLGTTGDMAAAAAFLASDDSSYITGETLVV 805
Query: 790 AGGVQSRL* 816
AGG+ SRL*
Sbjct: 806 AGGMPSRL* 832
Score = 187 bits (402), Expect = 6e-046
Identities = 105/217 (48%), Positives = 117/217 (53%)
Frame = -1 / -2
Query: 812 SLDCTPPATTMVSAVMYDXXXXXXXXXXXXXXSTVPNXXXXXXXXXXXXXXXXXVRKLAN 633
SL+ PPATT VS VM + VPN V K A
Sbjct: 828 SLEGIPPATTKVSPVM*EESSDAKKAAAAAMSPVVPNLLSRVFSSIPSLTSELPVMKEAK 649
Query: 632 RVGTKPGAIQLTRVSGPISPARAFVRPKRAVFVTPYIVNPCSGL*PAIEEIIITDDPFXX 453
VGTKPGA TRVSG IS A A V P+RAV VTPYI G PAIE + IT++PF
Sbjct: 648 CVGTKPGATAFTRVSGAISAASALVSPRRAVLVTPYIAIAPCGENPAIEVMKITEEPFSR 469
Query: 452 XXXXXXXXXIEALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLTAVSMRLLR 273
IE LTLIS SLSRT S + + S +G AAAL+T IS+ P T S RL R
Sbjct: 468 *GAISCRRSIEDLTLISQSLSRTASLLDKIGSVDGLAAALQTTISIFPYF*TVFSTRLRR 289
Query: 272 CCASETWQTAPTAVIPLALSPSTASFTFFCLREEMTT 162
C A ET QT P A IPL LS +TAS TF CLREE TT
Sbjct: 288 C*ALET*QTIPYASIPLDLSFATASSTFACLREETTT 178
Score = 141 bits (302), Expect = 4e-032
Identities = 79/243 (32%), Positives = 122/243 (50%)
Frame = -3 / -1
Query: 801 HPSSNNNGFSRNV*CVVRRQKSRSRSHVFHSTQSLKLGPLVKLFPNGLIFCEETSKPCRN 622
H SS+N FS +V ++ +S SHV +Q +K L FP+ +E SK C +
Sbjct: 817 HSSSDNQSFSSDVRRII*C*ESSRSSHVSRCSQPVKQSLLFNTFPHFRATGDERSKVCGH 638
Query: 621 KTRGYTVNTSIGSHLTSKSLRETKESSLCDTIHCQSLFWIVTSXXXXXXXX*PLP*VRSS 442
KT V+T IG HL+SK L +++SS DTIH S W +S L VRS
Sbjct: 637 KTGCNCVHTCIGGHLSSKRLS*SEKSSFSDTIHSHSSLW*KSSNRSYEDNRRTLLKVRSH 458
Query: 441 ILNKKDRSLDVNIPQLIENRLFHFKYAIYRRICGSIGDKNIYVPKALDGRLDEALALLCV 262
IL +K R D++ P+L++N F + + R I S+ D +IY+P L+ D+ A+L +
Sbjct: 457 ILQEKYRGFDIDFPKLVKNSFFARQDWVCRWIGSSVTDNDIYLPIFLNRLFDKIAAMLSI 278
Query: 261 GDVADGTNRGDTLGPEPLHRLVHVXXXXXXXXXXXXLQTEALGDGEADPHRGRRHDGHLP 82
G++ D + + G E + L+++ +TE L D E +P R RH+
Sbjct: 277 GNMTDDSICINPFGFEFCYCLINICLFAGRDDDGSAFETETLSDSETNPLRRSRHNRDFA 98
Query: 81 LQT 73
Q+
Sbjct: 97 FQS 89
Score = 106 bits (226), Expect(2) = 1e-028
Identities = 52/138 (37%), Positives = 73/138 (52%)
Frame = +3 / +1
Query: 240 WCRLPRLRRTAAQEPHRDGRQELWAHRYSCLQCCRKSFCR*HT*NERVCSR*AVGY*RQG 419
W RL + + + + R E+W RY CL C +S R + +R CS A+G Q
Sbjct: 256 WNRLSCFQCSTSPQSCRKDGSEIWEDRYRCL*RCCQSIYRPNLV*QRSCS*QALGNQCQI 435
Query: 420 FYPSYSGCCSSPTEGVICDYYFFNCWLQSRTRIDNVWCHKDCSLWSHEGSCW*DGTRYSC 599
Y S +G SSP EG C + F CW+ + VWCH +CS ++ G+C *DG RY+C
Sbjct: 436 LYTSPAGYGSSP*EGFFCYLHNFYCWIFTTRSYGYVWCH*NCSSRTN*GACC*DGPRYTC 615
Query: 600 *LYSPWFCSYTVC*FPHR 653
FC++T+C F HR
Sbjct: 616 ERSCTRFCAHTLCFFHHR 669
Score = 43.2 bits (88), Expect(2) = 1e-028
Identities = 21/49 (42%), Positives = 27/49 (55%)
Frame = +3 / +1
Query: 672 RA*REDQA*EIGYCGRHGCGCGFSGV*RRIIHYG*NHCCCWRGAV*AVN 818
R *RED A*++G GRHGC F + +H+ N C WR A +N
Sbjct: 688 RY*REDSA*QVGNNGRHGCCGCFLSIR*FFLHHWRNFGCRWRNAFKTLN 834
>emb|BX826379.1|CNS0A2B1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB20ZA05 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1101
Score = 363 bits (787), Expect = 5e-099
Identities = 156/249 (62%), Positives = 185/249 (74%)
Frame = +1 / +2
Query: 70 RRLEGKVAIVTASTMGIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGITAVGAV 249
RRLEGKVAIVTAST GIG I ER GLEGA+VV+SSRKQ NV+EAV L++KGI A G V
Sbjct: 74 RRLEGKVAIVTASTQGIGFGITERFGLEGASVVVSSRKQANVDEAVAKLKSKGIDAYGIV 253
Query: 250 CHVSDAQQRKSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINVKASIL 429
CHVS+AQ R++L+E V+ +G IDI+V NAAANPS D IL KE+VLDKLW+INVK+SIL
Sbjct: 254 CHVSNAQHRRNLVEKTVQKYGKIDIVVCNAAANPSTDPILSSKEAVLDKLWEINVKSSIL 433
Query: 430 LIQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTALFGLTKALAGEMGPDTRVNCI 609
L+QD APHL KG AG++P+ + MYGVTKTAL GLTKALA EM PDTRVN +
Sbjct: 434 LLQDMAPHLEKGSSVIFITSIAGFSPQGAMAMYGVTKTALLGLTKALAAEMAPDTRVNAV 613
Query: 610 APGFVPTRFASFLTENETIRKELNERTKLKRLGTVEDMXXXXXXXXXXXXXYITAETIVV 789
APGFVPT FASF+T + +R+ + E+T L RLGT DM YIT ET+VV
Sbjct: 614 APGFVPTHFASFITGSSEVREGIEEKTLLNRLGTTGDMAAAAAFLASDDSSYITGETLVV 793
Query: 790 AGGVQSRL* 816
AGG+ SRL*
Sbjct: 794 AGGMPSRL* 820
Score = 187 bits (402), Expect = 6e-046
Identities = 105/217 (48%), Positives = 117/217 (53%)
Frame = -1 / -1
Query: 812 SLDCTPPATTMVSAVMYDXXXXXXXXXXXXXXSTVPNXXXXXXXXXXXXXXXXXVRKLAN 633
SL+ PPATT VS VM + VPN V K A
Sbjct: 816 SLEGIPPATTKVSPVM*EESSDAKKAAAAAMSPVVPNLLSRVFSSIPSLTSELPVMKEAK 637
Query: 632 RVGTKPGAIQLTRVSGPISPARAFVRPKRAVFVTPYIVNPCSGL*PAIEEIIITDDPFXX 453
VGTKPGA TRVSG IS A A V P+RAV VTPYI G PAIE + IT++PF
Sbjct: 636 CVGTKPGATAFTRVSGAISAASALVSPRRAVLVTPYIAIAPCGENPAIEVMKITEEPFSR 457
Query: 452 XXXXXXXXXIEALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLTAVSMRLLR 273
IE LTLIS SLSRT S + + S +G AAAL+T IS+ P T S RL R
Sbjct: 456 *GAISCRRSIEDLTLISQSLSRTASLLDKIGSVDGLAAALQTTISIFPYF*TVFSTRLRR 277
Query: 272 CCASETWQTAPTAVIPLALSPSTASFTFFCLREEMTT 162
C A ET QT P A IPL LS +TAS TF CLREE TT
Sbjct: 276 C*ALET*QTIPYASIPLDLSFATASSTFACLREETTT 166
Score = 137 bits (293), Expect = 7e-031
Identities = 78/243 (32%), Positives = 121/243 (49%)
Frame = -3 / -3
Query: 801 HPSSNNNGFSRNV*CVVRRQKSRSRSHVFHSTQSLKLGPLVKLFPNGLIFCEETSKPCRN 622
H SS+N FS +V ++ +S SHV +Q +K L FP+ +E SK C +
Sbjct: 805 HSSSDNQSFSSDVRRII*C*ESSRSSHVSRCSQPVKQSLLFNTFPHFRATGDERSKVCGH 626
Query: 621 KTRGYTVNTSIGSHLTSKSLRETKESSLCDTIHCQSLFWIVTSXXXXXXXX*PLP*VRSS 442
KT V+T IG HL+SK L +++SS DTIH S W +S L VRS
Sbjct: 625 KTGCNCVHTCIGGHLSSKRLS*SEKSSFSDTIHSHSSLW*KSSNRSYEDNRRTLLKVRSH 446
Query: 441 ILNKKDRSLDVNIPQLIENRLFHFKYAIYRRICGSIGDKNIYVPKALDGRLDEALALLCV 262
IL +K R D++ P+L++N F + + R I S+ D +IY+P L+ D+ A+L +
Sbjct: 445 ILQEKYRGFDIDFPKLVKNSFFARQDWVCRWIGSSVTDNDIYLPIFLNRLFDKIAAMLSI 266
Query: 261 GDVADGTNRGDTLGPEPLHRLVHVXXXXXXXXXXXXLQTEALGDGEADPHRGRRHDGHLP 82
G++ D + + G E + L+++ +TE L D E +P R R +
Sbjct: 265 GNMTDDSICINPFGFEFCYCLINICLFAGRDDDGSAFETETLSDSETNPLRRSRDNRDFA 86
Query: 81 LQT 73
Q+
Sbjct: 85 FQS 77
Score = 106 bits (226), Expect(2) = 1e-028
Identities = 52/138 (37%), Positives = 73/138 (52%)
Frame = +3 / +1
Query: 240 WCRLPRLRRTAAQEPHRDGRQELWAHRYSCLQCCRKSFCR*HT*NERVCSR*AVGY*RQG 419
W RL + + + + R E+W RY CL C +S R + +R CS A+G Q
Sbjct: 244 WNRLSCFQCSTSPQSCRKDGSEIWEDRYRCL*RCCQSIYRPNLV*QRSCS*QALGNQCQI 423
Query: 420 FYPSYSGCCSSPTEGVICDYYFFNCWLQSRTRIDNVWCHKDCSLWSHEGSCW*DGTRYSC 599
Y S +G SSP EG C + F CW+ + VWCH +CS ++ G+C *DG RY+C
Sbjct: 424 LYTSPAGYGSSP*EGFFCYLHNFYCWIFTTRSYGYVWCH*NCSSRTN*GACC*DGPRYTC 603
Query: 600 *LYSPWFCSYTVC*FPHR 653
FC++T+C F HR
Sbjct: 604 ERSCTRFCAHTLCFFHHR 657
Score = 43.2 bits (88), Expect(2) = 1e-028
Identities = 21/49 (42%), Positives = 27/49 (55%)
Frame = +3 / +1
Query: 672 RA*REDQA*EIGYCGRHGCGCGFSGV*RRIIHYG*NHCCCWRGAV*AVN 818
R *RED A*++G GRHGC F + +H+ N C WR A +N
Sbjct: 676 RY*REDSA*QVGNNGRHGCCGCFLSIR*FFLHHWRNFGCRWRNAFKTLN 822
>ref|NM_116791.1| Arabidopsis thaliana oxidoreductase AT4G05530 mRNA, complete cds
Length = 1123
Score = 363 bits (787), Expect = 5e-099
Identities = 156/249 (62%), Positives = 185/249 (74%)
Frame = +1 / +2
Query: 70 RRLEGKVAIVTASTMGIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGITAVGAV 249
RRLEGKVAIVTAST GIG I ER GLEGA+VV+SSRKQ NV+EAV L++KGI A G V
Sbjct: 86 RRLEGKVAIVTASTQGIGFGITERFGLEGASVVVSSRKQANVDEAVAKLKSKGIDAYGIV 265
Query: 250 CHVSDAQQRKSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINVKASIL 429
CHVS+AQ R++L+E V+ +G IDI+V NAAANPS D IL KE+VLDKLW+INVK+SIL
Sbjct: 266 CHVSNAQHRRNLVEKTVQKYGKIDIVVCNAAANPSTDPILSSKEAVLDKLWEINVKSSIL 445
Query: 430 LIQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTALFGLTKALAGEMGPDTRVNCI 609
L+QD APHL KG AG++P+ + MYGVTKTAL GLTKALA EM PDTRVN +
Sbjct: 446 LLQDMAPHLEKGSSVIFITSIAGFSPQGAMAMYGVTKTALLGLTKALAAEMAPDTRVNAV 625
Query: 610 APGFVPTRFASFLTENETIRKELNERTKLKRLGTVEDMXXXXXXXXXXXXXYITAETIVV 789
APGFVPT FASF+T + +R+ + E+T L RLGT DM YIT ET+VV
Sbjct: 626 APGFVPTHFASFITGSSEVREGIEEKTLLNRLGTTGDMAAAAAFLASDDSSYITGETLVV 805
Query: 790 AGGVQSRL* 816
AGG+ SRL*
Sbjct: 806 AGGMPSRL* 832
Score = 187 bits (402), Expect = 6e-046
Identities = 105/217 (48%), Positives = 117/217 (53%)
Frame = -1 / -2
Query: 812 SLDCTPPATTMVSAVMYDXXXXXXXXXXXXXXSTVPNXXXXXXXXXXXXXXXXXVRKLAN 633
SL+ PPATT VS VM + VPN V K A
Sbjct: 828 SLEGIPPATTKVSPVM*EESSDAKKAAAAAMSPVVPNLLSRVFSSIPSLTSELPVMKEAK 649
Query: 632 RVGTKPGAIQLTRVSGPISPARAFVRPKRAVFVTPYIVNPCSGL*PAIEEIIITDDPFXX 453
VGTKPGA TRVSG IS A A V P+RAV VTPYI G PAIE + IT++PF
Sbjct: 648 CVGTKPGATAFTRVSGAISAASALVSPRRAVLVTPYIAIAPCGENPAIEVMKITEEPFSR 469
Query: 452 XXXXXXXXXIEALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLTAVSMRLLR 273
IE LTLIS SLSRT S + + S +G AAAL+T IS+ P T S RL R
Sbjct: 468 *GAISCRRSIEDLTLISQSLSRTASLLDKIGSVDGLAAALQTTISIFPYF*TVFSTRLRR 289
Query: 272 CCASETWQTAPTAVIPLALSPSTASFTFFCLREEMTT 162
C A ET QT P A IPL LS +TAS TF CLREE TT
Sbjct: 288 C*ALET*QTIPYASIPLDLSFATASSTFACLREETTT 178
Score = 141 bits (302), Expect = 4e-032
Identities = 79/243 (32%), Positives = 122/243 (50%)
Frame = -3 / -1
Query: 801 HPSSNNNGFSRNV*CVVRRQKSRSRSHVFHSTQSLKLGPLVKLFPNGLIFCEETSKPCRN 622
H SS+N FS +V ++ +S SHV +Q +K L FP+ +E SK C +
Sbjct: 817 HSSSDNQSFSSDVRRII*C*ESSRSSHVSRCSQPVKQSLLFNTFPHFRATGDERSKVCGH 638
Query: 621 KTRGYTVNTSIGSHLTSKSLRETKESSLCDTIHCQSLFWIVTSXXXXXXXX*PLP*VRSS 442
KT V+T IG HL+SK L +++SS DTIH S W +S L VRS
Sbjct: 637 KTGCNCVHTCIGGHLSSKRLS*SEKSSFSDTIHSHSSLW*KSSNRSYEDNRRTLLKVRSH 458
Query: 441 ILNKKDRSLDVNIPQLIENRLFHFKYAIYRRICGSIGDKNIYVPKALDGRLDEALALLCV 262
IL +K R D++ P+L++N F + + R I S+ D +IY+P L+ D+ A+L +
Sbjct: 457 ILQEKYRGFDIDFPKLVKNSFFARQDWVCRWIGSSVTDNDIYLPIFLNRLFDKIAAMLSI 278
Query: 261 GDVADGTNRGDTLGPEPLHRLVHVXXXXXXXXXXXXLQTEALGDGEADPHRGRRHDGHLP 82
G++ D + + G E + L+++ +TE L D E +P R RH+
Sbjct: 277 GNMTDDSICINPFGFEFCYCLINICLFAGRDDDGSAFETETLSDSETNPLRRSRHNRDFA 98
Query: 81 LQT 73
Q+
Sbjct: 97 FQS 89
Score = 106 bits (226), Expect(2) = 1e-028
Identities = 52/138 (37%), Positives = 73/138 (52%)
Frame = +3 / +1
Query: 240 WCRLPRLRRTAAQEPHRDGRQELWAHRYSCLQCCRKSFCR*HT*NERVCSR*AVGY*RQG 419
W RL + + + + R E+W RY CL C +S R + +R CS A+G Q
Sbjct: 256 WNRLSCFQCSTSPQSCRKDGSEIWEDRYRCL*RCCQSIYRPNLV*QRSCS*QALGNQCQI 435
Query: 420 FYPSYSGCCSSPTEGVICDYYFFNCWLQSRTRIDNVWCHKDCSLWSHEGSCW*DGTRYSC 599
Y S +G SSP EG C + F CW+ + VWCH +CS ++ G+C *DG RY+C
Sbjct: 436 LYTSPAGYGSSP*EGFFCYLHNFYCWIFTTRSYGYVWCH*NCSSRTN*GACC*DGPRYTC 615
Query: 600 *LYSPWFCSYTVC*FPHR 653
FC++T+C F HR
Sbjct: 616 ERSCTRFCAHTLCFFHHR 669
Score = 43.2 bits (88), Expect(2) = 1e-028
Identities = 21/49 (42%), Positives = 27/49 (55%)
Frame = +3 / +1
Query: 672 RA*REDQA*EIGYCGRHGCGCGFSGV*RRIIHYG*NHCCCWRGAV*AVN 818
R *RED A*++G GRHGC F + +H+ N C WR A +N
Sbjct: 688 RY*REDSA*QVGNNGRHGCCGCFLSIR*FFLHHWRNFGCRWRNAFKTLN 834
>gb|CK119562.1|CK119562 201h22.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011H22201
5-PRIME, mRNA sequence
Length = 809
Score = 357 bits (774), Expect = 3e-097
Identities = 152/244 (62%), Positives = 181/244 (74%)
Frame = +1 / +2
Query: 70 RRLEGKVAIVTASTMGIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGITAVGAV 249
RRLEGKVAIVTAST GIG I ER GLEGA+VV+SSRKQ NV+EAV L++KGI A G V
Sbjct: 74 RRLEGKVAIVTASTQGIGFGITERFGLEGASVVVSSRKQANVDEAVAKLKSKGIDAYGIV 253
Query: 250 CHVSDAQQRKSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINVKASIL 429
CHVS+AQ R++L+E V+ +G IDI+V NAAANPS D IL KE+VLDKLW+INVK+SIL
Sbjct: 254 CHVSNAQHRRNLVEKTVQKYGKIDIVVCNAAANPSTDPILSSKEAVLDKLWEINVKSSIL 433
Query: 430 LIQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTALFGLTKALAGEMGPDTRVNCI 609
L+QD APHL KG AG++P+ + MYGVTKTAL GLTKALA EM PDTRVN +
Sbjct: 434 LLQDMAPHLEKGSSVIFITSIAGFSPQGAMAMYGVTKTALLGLTKALAAEMAPDTRVNAV 613
Query: 610 APGFVPTRFASFLTENETIRKELNERTKLKRLGTVEDMXXXXXXXXXXXXXYITAETIVV 789
APGFVPT FASF+T + +R+ + E+T L RLGT DM YIT ET+VV
Sbjct: 614 APGFVPTHFASFITGSSEVREGIEEKTLLNRLGTTGDMAAAAAFLASDDSSYITGETLVV 793
Query: 790 AGGV 801
AGG+
Sbjct: 794 AGGM 805
Score = 184 bits (396), Expect = 4e-045
Identities = 103/212 (48%), Positives = 114/212 (53%)
Frame = -1 / -3
Query: 797 PPATTMVSAVMYDXXXXXXXXXXXXXXSTVPNXXXXXXXXXXXXXXXXXVRKLANRVGTK 618
PPATT VS VM + VPN V K A VGTK
Sbjct: 801 PPATTKVSPVM*EESSDAKKAAAAAMSPVVPNLLSRVFSSIPSLTSELPVMKEAKCVGTK 622
Query: 617 PGAIQLTRVSGPISPARAFVRPKRAVFVTPYIVNPCSGL*PAIEEIIITDDPFXXXXXXX 438
PGA TRVSG IS A A V P+RAV VTPYI G PAIE + IT++PF
Sbjct: 621 PGATAFTRVSGAISAASALVSPRRAVLVTPYIAIAPCGENPAIEVMKITEEPFSR*GAIS 442
Query: 437 XXXXIEALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLTAVSMRLLRCCASE 258
IE LTLIS SLSRT S + + S +G AAAL+T IS+ P T S RL RC A E
Sbjct: 441 CRRSIEDLTLISQSLSRTASLLDKIGSVDGLAAALQTTISIFPYF*TVFSTRLRRC*ALE 262
Query: 257 TWQTAPTAVIPLALSPSTASFTFFCLREEMTT 162
T QT P A IPL LS +TAS TF CLREE TT
Sbjct: 261 T*QTIPYASIPLDLSFATASSTFACLREETTT 166
Score = 141 bits (302), Expect = 4e-032
Identities = 79/243 (32%), Positives = 122/243 (50%)
Frame = -3 / -2
Query: 801 HPSSNNNGFSRNV*CVVRRQKSRSRSHVFHSTQSLKLGPLVKLFPNGLIFCEETSKPCRN 622
H SS+N FS +V ++ +S SHV +Q +K L FP+ +E SK C +
Sbjct: 805 HSSSDNQSFSSDVRRII*C*ESSRSSHVSRCSQPVKQSLLFNTFPHFRATGDERSKVCGH 626
Query: 621 KTRGYTVNTSIGSHLTSKSLRETKESSLCDTIHCQSLFWIVTSXXXXXXXX*PLP*VRSS 442
KT V+T IG HL+SK L +++SS DTIH S W +S L VRS
Sbjct: 625 KTGCNCVHTCIGGHLSSKRLS*SEKSSFSDTIHSHSSLW*KSSNRSYEDNRRTLLKVRSH 446
Query: 441 ILNKKDRSLDVNIPQLIENRLFHFKYAIYRRICGSIGDKNIYVPKALDGRLDEALALLCV 262
IL +K R D++ P+L++N F + + R I S+ D +IY+P L+ D+ A+L +
Sbjct: 445 ILQEKYRGFDIDFPKLVKNSFFARQDWVCRWIGSSVTDNDIYLPIFLNRLFDKIAAMLSI 266
Query: 261 GDVADGTNRGDTLGPEPLHRLVHVXXXXXXXXXXXXLQTEALGDGEADPHRGRRHDGHLP 82
G++ D + + G E + L+++ +TE L D E +P R RH+
Sbjct: 265 GNMTDDSICINPFGFEFCYCLINICLFAGRDDDGSAFETETLSDSETNPLRRSRHNRDFA 86
Query: 81 LQT 73
Q+
Sbjct: 85 FQS 77
Score = 106 bits (226), Expect(2) = 2e-028
Identities = 52/138 (37%), Positives = 73/138 (52%)
Frame = +3 / +1
Query: 240 WCRLPRLRRTAAQEPHRDGRQELWAHRYSCLQCCRKSFCR*HT*NERVCSR*AVGY*RQG 419
W RL + + + + R E+W RY CL C +S R + +R CS A+G Q
Sbjct: 244 WNRLSCFQCSTSPQSCRKDGSEIWEDRYRCL*RCCQSIYRPNLV*QRSCS*QALGNQCQI 423
Query: 420 FYPSYSGCCSSPTEGVICDYYFFNCWLQSRTRIDNVWCHKDCSLWSHEGSCW*DGTRYSC 599
Y S +G SSP EG C + F CW+ + VWCH +CS ++ G+C *DG RY+C
Sbjct: 424 LYTSPAGYGSSP*EGFFCYLHNFYCWIFTTRSYGYVWCH*NCSSRTN*GACC*DGPRYTC 603
Query: 600 *LYSPWFCSYTVC*FPHR 653
FC++T+C F HR
Sbjct: 604 ERSCTRFCAHTLCFFHHR 657
Score = 42.3 bits (86), Expect(2) = 2e-028
Identities = 20/44 (45%), Positives = 25/44 (56%)
Frame = +3 / +1
Query: 672 RA*REDQA*EIGYCGRHGCGCGFSGV*RRIIHYG*NHCCCWRGA 803
R *RED A*++G GRHGC F + +H+ N C WR A
Sbjct: 676 RY*REDSA*QVGNNGRHGCCGCFLSIR*FFLHHWRNFGCRWRNA 807
>gb|CK117872.1|CK117872 209m20.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011M20209
5-PRIME, mRNA sequence
Length = 759
Score = 340 bits (737), Expect = 4e-092
Identities = 145/234 (61%), Positives = 172/234 (73%)
Frame = +1 / +2
Query: 70 RRLEGKVAIVTASTMGIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGITAVGAV 249
RRLEGKVAIVTAST GIG I ER GLEGA+VV+SSRKQ NV+EAV L++KGI A G V
Sbjct: 56 RRLEGKVAIVTASTQGIGFGITERFGLEGASVVVSSRKQANVDEAVAKLKSKGIDAYGIV 235
Query: 250 CHVSDAQQRKSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINVKASIL 429
CHVS+AQ R++L+E V+ +G IDI+V NAAANPS D IL KE+VLDKLW+INVK+SIL
Sbjct: 236 CHVSNAQHRRNLVEKTVQKYGKIDIVVCNAAANPSTDPILSSKEAVLDKLWEINVKSSIL 415
Query: 430 LIQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTALFGLTKALAGEMGPDTRVNCI 609
L+QD APHL KG AG++P+ + MYGVTKTAL GLTKALA EM PDTRVN +
Sbjct: 416 LLQDMAPHLEKGSSVIFITSIAGFSPQGAMAMYGVTKTALLGLTKALAAEMAPDTRVNAV 595
Query: 610 APGFVPTRFASFLTENETIRKELNERTKLKRLGTVEDMXXXXXXXXXXXXXYIT 771
APGFVPT FASF+T + +R+ + E+T L RLGT DM YIT
Sbjct: 596 APGFVPTHFASFITGSSEVREGIEEKTLLNRLGTTGDMAAAAAFLASDDSSYIT 757
Score = 168 bits (362), Expect = 2e-040
Identities = 94/183 (51%), Positives = 104/183 (56%)
Frame = -1 / -1
Query: 710 VPNXXXXXXXXXXXXXXXXXVRKLANRVGTKPGAIQLTRVSGPISPARAFVRPKRAVFVT 531
VPN V K A VGTKPGA TRVSG IS A A V P+RAV VT
Sbjct: 696 VPNLLSRVFSSIPSLTSELPVMKEAKCVGTKPGATAFTRVSGAISAASALVSPRRAVLVT 517
Query: 530 PYIVNPCSGL*PAIEEIIITDDPFXXXXXXXXXXXIEALTLISHSLSRTDSFISSMLSTE 351
PYI G PAIE + IT++PF IE LTLIS SLSRT S + + S +
Sbjct: 516 PYIAIAPCGENPAIEVMKITEEPFSR*GAISCRRSIEDLTLISQSLSRTASLLDKIGSVD 337
Query: 350 GFAAALETRISMCPKLLTAVSMRLLRCCASETWQTAPTAVIPLALSPSTASFTFFCLREE 171
G AAAL+T IS+ P T S RL RC A ET QT P A IPL LS +TAS TF CLREE
Sbjct: 336 GLAAALQTTISIFPYF*TVFSTRLRRC*ALET*QTIPYASIPLDLSFATASSTFACLREE 157
Query: 170 MTT 162
TT
Sbjct: 156 TTT 148
Score = 130 bits (278), Expect = 8e-029
Identities = 72/223 (32%), Positives = 111/223 (49%)
Frame = -3 / -3
Query: 741 KSRSRSHVFHSTQSLKLGPLVKLFPNGLIFCEETSKPCRNKTRGYTVNTSIGSHLTSKSL 562
+S SHV +Q +K L FP+ +E SK C +KT V+T IG HL+SK L
Sbjct: 727 ESSRSSHVSRCSQPVKQSLLFNTFPHFRATGDERSKVCGHKTGCNCVHTCIGGHLSSKRL 548
Query: 561 RETKESSLCDTIHCQSLFWIVTSXXXXXXXX*PLP*VRSSILNKKDRSLDVNIPQLIENR 382
+++SS DTIH S W +S L VRS IL +K R D++ P+L++N
Sbjct: 547 S*SEKSSFSDTIHSHSSLW*KSSNRSYEDNRRTLLKVRSHILQEKYRGFDIDFPKLVKNS 368
Query: 381 LFHFKYAIYRRICGSIGDKNIYVPKALDGRLDEALALLCVGDVADGTNRGDTLGPEPLHR 202
F + + R I S+ D +IY+P L+ D+ A+L +G++ D + + G E +
Sbjct: 367 FFARQDWVCRWIGSSVTDNDIYLPIFLNRLFDKIAAMLSIGNMTDDSICINPFGFEFCYC 188
Query: 201 LVHVXXXXXXXXXXXXLQTEALGDGEADPHRGRRHDGHLPLQT 73
L+++ +TE L D E +P R RH+ Q+
Sbjct: 187 LINICLFAGRDDDGSAFETETLSDSETNPLRRSRHNRDFAFQS 59
Score = 106 bits (226), Expect(2) = 1e-025
Identities = 52/138 (37%), Positives = 73/138 (52%)
Frame = +3 / +1
Query: 240 WCRLPRLRRTAAQEPHRDGRQELWAHRYSCLQCCRKSFCR*HT*NERVCSR*AVGY*RQG 419
W RL + + + + R E+W RY CL C +S R + +R CS A+G Q
Sbjct: 226 WNRLSCFQCSTSPQSCRKDGSEIWEDRYRCL*RCCQSIYRPNLV*QRSCS*QALGNQCQI 405
Query: 420 FYPSYSGCCSSPTEGVICDYYFFNCWLQSRTRIDNVWCHKDCSLWSHEGSCW*DGTRYSC 599
Y S +G SSP EG C + F CW+ + VWCH +CS ++ G+C *DG RY+C
Sbjct: 406 LYTSPAGYGSSP*EGFFCYLHNFYCWIFTTRSYGYVWCH*NCSSRTN*GACC*DGPRYTC 585
Query: 600 *LYSPWFCSYTVC*FPHR 653
FC++T+C F HR
Sbjct: 586 ERSCTRFCAHTLCFFHHR 639
Score = 32.7 bits (65), Expect(2) = 1e-025
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +3 / +1
Query: 672 RA*REDQA*EIGYCGRHGC 728
R *RED A*++G GRHGC
Sbjct: 658 RY*REDSA*QVGNNGRHGC 714
>gb|AV821519.1|AV821519 AV821519 RAFL4 Arabidopsis thaliana cDNA clone RAFL04-12-P17 5',
mRNA sequence
Length = 698
Score = 292 bits (632), Expect(2) = 8e-083
Identities = 124/184 (67%), Positives = 145/184 (78%)
Frame = +1 / +1
Query: 70 RRLEGKVAIVTASTMGIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGITAVGAV 249
RRLEGKVAIVTAST GIG I ER GLEGA+VV+SSRKQ NV+EAV L++KGI A G V
Sbjct: 70 RRLEGKVAIVTASTQGIGFGITERFGLEGASVVVSSRKQANVDEAVAKLKSKGIDAYGIV 249
Query: 250 CHVSDAQQRKSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINVKASIL 429
CHVS+AQ R++L+E V+ +G IDI+V NAAANPS D IL KE+VLDKLW+INVK+SIL
Sbjct: 250 CHVSNAQHRRNLVEKTVQKYGKIDIVVCNAAANPSTDPILSSKEAVLDKLWEINVKSSIL 429
Query: 430 LIQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTALFGLTKALAGEMGPDTRVNCI 609
L+QD APHL KG AG++P+ + MYGVTKTAL GLTKALA EM PDTRVN +
Sbjct: 430 LLQDMAPHLEKGSSVIFITSIAGFSPQGAMAMYGVTKTALLGLTKALAAEMAPDTRVNAV 609
Query: 610 APGF 621
APGF
Sbjct: 610 APGF 621
Score = 157 bits (337), Expect = 6e-037
Identities = 84/152 (55%), Positives = 94/152 (61%)
Frame = -1 / -1
Query: 617 PGAIQLTRVSGPISPARAFVRPKRAVFVTPYIVNPCSGL*PAIEEIIITDDPFXXXXXXX 438
PGA TRVSG IS A A V P+RAV VTPYI G PAIE + IT++PF
Sbjct: 617 PGATAFTRVSGAISAASALVSPRRAVLVTPYIAIAPCGENPAIEVMKITEEPFSR*GAIS 438
Query: 437 XXXXIEALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLTAVSMRLLRCCASE 258
IE LTLIS SLSRT S + + S +G AAAL+T IS+ P T S RL RC A E
Sbjct: 437 CRRSIEDLTLISQSLSRTASLLDKIGSVDGLAAALQTTISIFPYF*TVFSTRLRRC*ALE 258
Query: 257 TWQTAPTAVIPLALSPSTASFTFFCLREEMTT 162
T QT P A IPL LS +TAS TF CLREE TT
Sbjct: 257 T*QTIPYASIPLDLSFATASSTFACLREETTT 162
Score = 107 bits (229), Expect = 5e-022
Identities = 57/177 (32%), Positives = 90/177 (50%)
Frame = -3 / -3
Query: 603 VNTSIGSHLTSKSLRETKESSLCDTIHCQSLFWIVTSXXXXXXXX*PLP*VRSSILNKKD 424
V+T IG HL+SK L +++SS DTIH S W +S L VRS IL +K
Sbjct: 603 VHTCIGGHLSSKRLS*SEKSSFSDTIHSHSSLW*KSSNRSYEDNRRTLLKVRSHILQEKY 424
Query: 423 RSLDVNIPQLIENRLFHFKYAIYRRICGSIGDKNIYVPKALDGRLDEALALLCVGDVADG 244
R D++ P+L++N F + + R I S+ D +IY+P L+ D+ A+L +G++ D
Sbjct: 423 RGFDIDFPKLVKNSFFARQDWVCRWIGSSVTDNDIYLPIFLNRLFDKIAAMLSIGNMTDD 244
Query: 243 TNRGDTLGPEPLHRLVHVXXXXXXXXXXXXLQTEALGDGEADPHRGRRHDGHLPLQT 73
+ + G E + L+++ +TE L D E +P R RH+ Q+
Sbjct: 243 SICINPFGFEFCYCLINICLFAGRDDDGSAFETETLSDSETNPLRRSRHNRDFAFQS 73
Score = 38.2 bits (77), Expect(2) = 8e-083
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +1 / +2
Query: 613 PGFVPTRFASFLTENETIRKELNERTKL 696
PGFVPT FASF+T + +R+ + +T L
Sbjct: 614 PGFVPTHFASFITGSSEVREGIEXKTLL 697
>gb|CB254882.1|CB254882 56-E018438-019-009-O14-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768O149Q 5-PRIME, mRNA sequence
Length = 621
Score = 284 bits (614), Expect = 4e-075
Identities = 122/184 (66%), Positives = 142/184 (77%)
Frame = +1 / +1
Query: 70 RRLEGKVAIVTASTMGIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGITAVGAV 249
RRLEGKVAIVTAST GIG I ER GLEGA+VV+SSRKQ NV+EAV L++KGI A G V
Sbjct: 70 RRLEGKVAIVTASTQGIGFGITERFGLEGASVVVSSRKQANVDEAVAKLKSKGIDAYGIV 249
Query: 250 CHVSDAQQRKSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINVKASIL 429
CHVS+AQ R++L+E V+ + IDI NAAANPS D IL KE+VLDKLW+INVK+SIL
Sbjct: 250 CHVSNAQHRRNLVEKTVQKYV*IDIAACNAAANPSTDPILSSKEAVLDKLWEINVKSSIL 429
Query: 430 LIQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTALFGLTKALAGEMGPDTRVNCI 609
L+QD APHL KG AG++P+ + MYGVTKTAL GLTKALA EM PDTRVN +
Sbjct: 430 LLQDMAPHLEKGSSVIFITSIAGFSPQGAMAMYGVTKTALLGLTKALAAEMAPDTRVNAV 609
Query: 610 APGF 621
APGF
Sbjct: 610 APGF 621
Score = 152 bits (327), Expect = 1e-035
Identities = 83/153 (54%), Positives = 93/153 (60%)
Frame = -1 / -2
Query: 620 KPGAIQLTRVSGPISPARAFVRPKRAVFVTPYIVNPCSGL*PAIEEIIITDDPFXXXXXX 441
KPGA TRVSG IS A A V P+RAV VTPYI G PAIE + IT++PF
Sbjct: 620 KPGATAFTRVSGAISAASALVSPRRAVLVTPYIAIAPCGENPAIEVMKITEEPFSR*GAI 441
Query: 440 XXXXXIEALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLTAVSMRLLRCCAS 261
IE LTLIS SLSRT S + + S +G AAAL+ IS+ T S RL RC A
Sbjct: 440 SCRRSIEDLTLISQSLSRTASLLDKIGSVDGLAAALQAAISI*TYF*TVFSTRLRRC*AL 261
Query: 260 ETWQTAPTAVIPLALSPSTASFTFFCLREEMTT 162
ET QT P A IPL LS +TAS TF CLREE TT
Sbjct: 260 ET*QTIPYASIPLDLSFATASSTFACLREETTT 162
>emb|AX059543.1| Sequence 276 from Patent WO0055325
Length = 47412
Score = 80.3 bits (169), Expect(6) = 4e-068
Identities = 33/51 (64%), Positives = 41/51 (80%)
Frame = +1 / +2
Query: 298 VKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINVKASILLIQDAAP 450
++ +G IDI+V NAAANPS D IL KE+VLDKLW+INVK+SILL+Q P
Sbjct: 36155 IQKYGKIDIVVCNAAANPSTDPILSSKEAVLDKLWEINVKSSILLLQVKLP 36307
Score = 73.5 bits (154), Expect(6) = 4e-068
Identities = 32/39 (82%), Positives = 34/39 (87%)
Frame = +1 / +1
Query: 70 RRLEGKVAIVTASTMGIGLAIAERLGLEGAAVVISSRKQ 186
RRLEGKVAIVTAST GIG I ER GLEGA+VV+SSRKQ
Sbjct: 35350 RRLEGKVAIVTASTQGIGFGITERFGLEGASVVVSSRKQ 35466
Score = 62.5 bits (130), Expect(6) = 4e-068
Identities = 25/46 (54%), Positives = 29/46 (63%)
Frame = +1 / +2
Query: 427 LLIQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTALFGLTK 564
L QD APHL KG AG++P+ + MYGVTKTAL GLTK
Sbjct: 36380 LFYQDMAPHLEKGSSVIFITSIAGFSPQGAMAMYGVTKTALLGLTK 36517
Score = 61.6 bits (128), Expect(6) = 4e-068
Identities = 23/40 (57%), Positives = 31/40 (77%)
Frame = +1 / +1
Query: 547 LFGLTKALAGEMGPDTRVNCIAPGFVPTRFASFLTENETI 666
++ + +ALA EM PDTRVN +APGFVPT FASF+T + +
Sbjct: 36580 IYHVFQALAAEMAPDTRVNAVAPGFVPTHFASFITGSSEV 36699
Score = 56.5 bits (117), Expect(6) = 4e-068
Identities = 23/40 (57%), Positives = 31/40 (77%)
Frame = +1 / +2
Query: 184 QKNVNEAVEGLRAKGITAVGAVCHVSDAQQRKSLIETAVK 303
Q NV+EAV L++KGI A G VCHVS+AQ R++L+E V+
Sbjct: 35855 QANVDEAVAKLKSKGIDAYGIVCHVSNAQHRRNLVEKTVQ 35974
Score = 54.7 bits (113), Expect(6) = 4e-068
Identities = 25/52 (48%), Positives = 30/52 (57%)
Frame = +1 / +3
Query: 661 TIRKELNERTKLKRLGTVEDMXXXXXXXXXXXXXYITAETIVVAGGVQSRL* 816
T R+ + E+T L RLGT DM YIT ET+VVAGG+ SRL*
Sbjct: 36789 TQREGIEEKTLLNRLGTTGDMAAAAAFLASDDSSYITGETLVVAGGMPSRL* 36944
Score = 46.9 bits (96), Expect(4) = 4e-022
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = +3 / +1
Query: 435 SGCCSSPTEGVICDYYFFNCWLQSRTRIDNVWCHKDCSLWSHEGSC 572
SG SSP EG C + F CW+ + VWCH +CS ++ G C
Sbjct: 36388 SGYGSSP*EGFFCYLHNFYCWIFTTRSYGYVWCH*NCSSRTN*GMC 36525
Score = 43.2 bits (88), Expect(4) = 4e-022
Identities = 21/49 (42%), Positives = 27/49 (55%)
Frame = +3 / +2
Query: 672 RA*REDQA*EIGYCGRHGCGCGFSGV*RRIIHYG*NHCCCWRGAV*AVN 818
R *RED A*++G GRHGC F + +H+ N C WR A +N
Sbjct: 36800 RY*REDSA*QVGNNGRHGCCGCFLSIR*FFLHHWRNFGCRWRNAFKTLN 36946
Score = 40.0 bits (81), Expect(4) = 4e-022
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +3 / +3
Query: 564 GSCW*DGTRYSC*LYSPWFCSYTVC*FPHR 653
G+C *DG RY+C FC++T+C F HR
Sbjct: 36597 GACC*DGPRYTCERSCTRFCAHTLCFFHHR 36686
Score = 31.8 bits (63), Expect(4) = 4e-022
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = +3 / +1
Query: 303 ELWAHRYSCLQCCRKSFCR*HT*NERVCSR*AVGY*RQGFYPSYSGCCS 449
E+W RY CL C +S R + +R CS A+G Q Y S +G S
Sbjct: 36160 EIWEDRYRCL*RCCQSIYRPNLV*QRSCS*QALGNQCQILYTSPAGKAS 36306
>gb|AF147263.1|T1J24 Arabidopsis thaliana BAC T1J24
Length = 122529
Score = 80.3 bits (169), Expect(6) = 4e-066
Identities = 33/51 (64%), Positives = 41/51 (80%)
Frame = +1 / -2
Query: 298 VKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINVKASILLIQDAAP 450
++ +G IDI+V NAAANPS D IL KE+VLDKLW+INVK+SILL+Q P
Sbjct: 80132 IQKYGKIDIVVCNAAANPSTDPILSSKEAVLDKLWEINVKSSILLLQVKLP 79980
Score = 73.5 bits (154), Expect(6) = 4e-066
Identities = 32/39 (82%), Positives = 34/39 (87%)
Frame = +1 / -1
Query: 70 RRLEGKVAIVTASTMGIGLAIAERLGLEGAAVVISSRKQ 186
RRLEGKVAIVTAST GIG I ER GLEGA+VV+SSRKQ
Sbjct: 80937 RRLEGKVAIVTASTQGIGFGITERFGLEGASVVVSSRKQ 80821
Score = 62.5 bits (130), Expect(6) = 4e-066
Identities = 25/46 (54%), Positives = 29/46 (63%)
Frame = +1 / -2
Query: 427 LLIQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTALFGLTK 564
L QD APHL KG AG++P+ + MYGVTKTAL GLTK
Sbjct: 79907 LFYQDMAPHLEKGSSVIFITSIAGFSPQGAMAMYGVTKTALLGLTK 79770
Score = 61.6 bits (128), Expect(6) = 4e-066
Identities = 23/40 (57%), Positives = 31/40 (77%)
Frame = +1 / -1
Query: 547 LFGLTKALAGEMGPDTRVNCIAPGFVPTRFASFLTENETI 666
++ + +ALA EM PDTRVN +APGFVPT FASF+T + +
Sbjct: 79707 IYHVFQALAAEMAPDTRVNAVAPGFVPTHFASFITGSSEV 79588
Score = 56.5 bits (117), Expect(6) = 4e-066
Identities = 23/40 (57%), Positives = 31/40 (77%)
Frame = +1 / -2
Query: 184 QKNVNEAVEGLRAKGITAVGAVCHVSDAQQRKSLIETAVK 303
Q NV+EAV L++KGI A G VCHVS+AQ R++L+E V+
Sbjct: 80432 QANVDEAVAKLKSKGIDAYGIVCHVSNAQHRRNLVEKTVQ 80313
Score = 54.7 bits (113), Expect(6) = 4e-066
Identities = 25/52 (48%), Positives = 30/52 (57%)
Frame = +1 / -3
Query: 661 TIRKELNERTKLKRLGTVEDMXXXXXXXXXXXXXYITAETIVVAGGVQSRL* 816
T R+ + E+T L RLGT DM YIT ET+VVAGG+ SRL*
Sbjct: 79498 TQREGIEEKTLLNRLGTTGDMAAAAAFLASDDSSYITGETLVVAGGMPSRL* 79343
Score = 46.9 bits (96), Expect(4) = 3e-022
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = +3 / -1
Query: 435 SGCCSSPTEGVICDYYFFNCWLQSRTRIDNVWCHKDCSLWSHEGSC 572
SG SSP EG C + F CW+ + VWCH +CS ++ G C
Sbjct: 79899 SGYGSSP*EGFFCYLHNFYCWIFTTRSYGYVWCH*NCSSRTN*GMC 79762
Score = 43.2 bits (88), Expect(4) = 3e-022
Identities = 21/49 (42%), Positives = 27/49 (55%)
Frame = +3 / -2
Query: 672 RA*REDQA*EIGYCGRHGCGCGFSGV*RRIIHYG*NHCCCWRGAV*AVN 818
R *RED A*++G GRHGC F + +H+ N C WR A +N
Sbjct: 79487 RY*REDSA*QVGNNGRHGCCGCFLSIR*FFLHHWRNFGCRWRNAFKTLN 79341
Score = 40.0 bits (81), Expect(4) = 3e-022
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +3 / -3
Query: 564 GSCW*DGTRYSC*LYSPWFCSYTVC*FPHR 653
G+C *DG RY+C FC++T+C F HR
Sbjct: 79690 GACC*DGPRYTCERSCTRFCAHTLCFFHHR 79601
Score = 31.8 bits (63), Expect(4) = 3e-022
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = +3 / -1
Query: 303 ELWAHRYSCLQCCRKSFCR*HT*NERVCSR*AVGY*RQGFYPSYSGCCS 449
E+W RY CL C +S R + +R CS A+G Q Y S +G S
Sbjct: 80127 EIWEDRYRCL*RCCQSIYRPNLV*QRSCS*QALGNQCQILYTSPAGKAS 79981
>emb|AL161503.2|ATCHRIV15 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 15
Length = 199987
Score = 80.3 bits (169), Expect(6) = 4e-065
Identities = 33/51 (64%), Positives = 41/51 (80%)
Frame = +1 / +1
Query: 298 VKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINVKASILLIQDAAP 450
++ +G IDI+V NAAANPS D IL KE+VLDKLW+INVK+SILL+Q P
Sbjct: 155737 IQKYGKIDIVVCNAAANPSTDPILSSKEAVLDKLWEINVKSSILLLQVKLP 155889
Score = 73.5 bits (154), Expect(6) = 4e-065
Identities = 32/39 (82%), Positives = 34/39 (87%)
Frame = +1 / +3
Query: 70 RRLEGKVAIVTASTMGIGLAIAERLGLEGAAVVISSRKQ 186
RRLEGKVAIVTAST GIG I ER GLEGA+VV+SSRKQ
Sbjct: 154932 RRLEGKVAIVTASTQGIGFGITERFGLEGASVVVSSRKQ 155048
Score = 62.5 bits (130), Expect(6) = 4e-065
Identities = 25/46 (54%), Positives = 29/46 (63%)
Frame = +1 / +1
Query: 427 LLIQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTALFGLTK 564
L QD APHL KG AG++P+ + MYGVTKTAL GLTK
Sbjct: 155962 LFYQDMAPHLEKGSSVIFITSIAGFSPQGAMAMYGVTKTALLGLTK 156099
Score = 61.6 bits (128), Expect(6) = 4e-065
Identities = 23/40 (57%), Positives = 31/40 (77%)
Frame = +1 / +3
Query: 547 LFGLTKALAGEMGPDTRVNCIAPGFVPTRFASFLTENETI 666
++ + +ALA EM PDTRVN +APGFVPT FASF+T + +
Sbjct: 156162 IYHVFQALAAEMAPDTRVNAVAPGFVPTHFASFITGSSEV 156281
Score = 56.5 bits (117), Expect(6) = 4e-065
Identities = 23/40 (57%), Positives = 31/40 (77%)
Frame = +1 / +1
Query: 184 QKNVNEAVEGLRAKGITAVGAVCHVSDAQQRKSLIETAVK 303
Q NV+EAV L++KGI A G VCHVS+AQ R++L+E V+
Sbjct: 155437 QANVDEAVAKLKSKGIDAYGIVCHVSNAQHRRNLVEKTVQ 155556
Score = 54.7 bits (113), Expect(6) = 4e-065
Identities = 25/52 (48%), Positives = 30/52 (57%)
Frame = +1 / +2
Query: 661 TIRKELNERTKLKRLGTVEDMXXXXXXXXXXXXXYITAETIVVAGGVQSRL* 816
T R+ + E+T L RLGT DM YIT ET+VVAGG+ SRL*
Sbjct: 156371 TQREGIEEKTLLNRLGTTGDMAAAAAFLASDDSSYITGETLVVAGGMPSRL* 156526
Score = 46.9 bits (96), Expect(4) = 3e-022
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = +3 / +3
Query: 435 SGCCSSPTEGVICDYYFFNCWLQSRTRIDNVWCHKDCSLWSHEGSC 572
SG SSP EG C + F CW+ + VWCH +CS ++ G C
Sbjct: 155970 SGYGSSP*EGFFCYLHNFYCWIFTTRSYGYVWCH*NCSSRTN*GMC 156107
Score = 43.2 bits (88), Expect(4) = 3e-022
Identities = 21/49 (42%), Positives = 27/49 (55%)
Frame = +3 / +1
Query: 672 RA*REDQA*EIGYCGRHGCGCGFSGV*RRIIHYG*NHCCCWRGAV*AVN 818
R *RED A*++G GRHGC F + +H+ N C WR A +N
Sbjct: 156382 RY*REDSA*QVGNNGRHGCCGCFLSIR*FFLHHWRNFGCRWRNAFKTLN 156528
Score = 40.0 bits (81), Expect(4) = 3e-022
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +3 / +2
Query: 564 GSCW*DGTRYSC*LYSPWFCSYTVC*FPHR 653
G+C *DG RY+C FC++T+C F HR
Sbjct: 156179 GACC*DGPRYTCERSCTRFCAHTLCFFHHR 156268
Score = 31.8 bits (63), Expect(4) = 3e-022
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = +3 / +3
Query: 303 ELWAHRYSCLQCCRKSFCR*HT*NERVCSR*AVGY*RQGFYPSYSGCCS 449
E+W RY CL C +S R + +R CS A+G Q Y S +G S
Sbjct: 155742 EIWEDRYRCL*RCCQSIYRPNLV*QRSCS*QALGNQCQILYTSPAGKAS 155888
>emb|AJ270058.1| Arabidopsis thaliana DNA chromosome 4, short arm
Length = 3052119
Score = 80.3 bits (169), Expect(6) = 2e-059
Identities = 33/51 (64%), Positives = 41/51 (80%)
Frame = +1 / +3
Query: 298 VKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINVKASILLIQDAAP 450
++ +G IDI+V NAAANPS D IL KE+VLDKLW+INVK+SILL+Q P
Sbjct: 2816103 IQKYGKIDIVVCNAAANPSTDPILSSKEAVLDKLWEINVKSSILLLQVKLP 2816255
Score = 73.5 bits (154), Expect(6) = 2e-059
Identities = 32/39 (82%), Positives = 34/39 (87%)
Frame = +1 / +2
Query: 70 RRLEGKVAIVTASTMGIGLAIAERLGLEGAAVVISSRKQ 186
RRLEGKVAIVTAST GIG I ER GLEGA+VV+SSRKQ
Sbjct: 2815298 RRLEGKVAIVTASTQGIGFGITERFGLEGASVVVSSRKQ 2815414
Score = 62.5 bits (130), Expect(6) = 2e-059
Identities = 25/46 (54%), Positives = 29/46 (63%)
Frame = +1 / +3
Query: 427 LLIQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTALFGLTK 564
L QD APHL KG AG++P+ + MYGVTKTAL GLTK
Sbjct: 2816328 LFYQDMAPHLEKGSSVIFITSIAGFSPQGAMAMYGVTKTALLGLTK 2816465
Score = 61.6 bits (128), Expect(6) = 2e-059
Identities = 23/40 (57%), Positives = 31/40 (77%)
Frame = +1 / +2
Query: 547 LFGLTKALAGEMGPDTRVNCIAPGFVPTRFASFLTENETI 666
++ + +ALA EM PDTRVN +APGFVPT FASF+T + +
Sbjct: 2816528 IYHVFQALAAEMAPDTRVNAVAPGFVPTHFASFITGSSEV 2816647
Score = 56.5 bits (117), Expect(6) = 2e-059
Identities = 23/40 (57%), Positives = 31/40 (77%)
Frame = +1 / +3
Query: 184 QKNVNEAVEGLRAKGITAVGAVCHVSDAQQRKSLIETAVK 303
Q NV+EAV L++KGI A G VCHVS+AQ R++L+E V+
Sbjct: 2815803 QANVDEAVAKLKSKGIDAYGIVCHVSNAQHRRNLVEKTVQ 2815922
Score = 54.7 bits (113), Expect(6) = 2e-059
Identities = 25/52 (48%), Positives = 30/52 (57%)
Frame = +1 / +1
Query: 661 TIRKELNERTKLKRLGTVEDMXXXXXXXXXXXXXYITAETIVVAGGVQSRL* 816
T R+ + E+T L RLGT DM YIT ET+VVAGG+ SRL*
Sbjct: 2816737 TQREGIEEKTLLNRLGTTGDMAAAAAFLASDDSSYITGETLVVAGGMPSRL* 2816892
Score = 46.9 bits (96), Expect(4) = 3e-022
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = +3 / +2
Query: 435 SGCCSSPTEGVICDYYFFNCWLQSRTRIDNVWCHKDCSLWSHEGSC 572
SG SSP EG C + F CW+ + VWCH +CS ++ G C
Sbjct: 2816336 SGYGSSP*EGFFCYLHNFYCWIFTTRSYGYVWCH*NCSSRTN*GMC 2816473
Score = 43.2 bits (88), Expect(4) = 3e-022
Identities = 21/49 (42%), Positives = 27/49 (55%)
Frame = +3 / +3
Query: 672 RA*REDQA*EIGYCGRHGCGCGFSGV*RRIIHYG*NHCCCWRGAV*AVN 818
R *RED A*++G GRHGC F + +H+ N C WR A +N
Sbjct: 2816748 RY*REDSA*QVGNNGRHGCCGCFLSIR*FFLHHWRNFGCRWRNAFKTLN 2816894
Score = 40.0 bits (81), Expect(4) = 3e-022
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +3 / +1
Query: 564 GSCW*DGTRYSC*LYSPWFCSYTVC*FPHR 653
G+C *DG RY+C FC++T+C F HR
Sbjct: 2816545 GACC*DGPRYTCERSCTRFCAHTLCFFHHR 2816634
Score = 31.8 bits (63), Expect(4) = 3e-022
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = +3 / +2
Query: 303 ELWAHRYSCLQCCRKSFCR*HT*NERVCSR*AVGY*RQGFYPSYSGCCS 449
E+W RY CL C +S R + +R CS A+G Q Y S +G S
Sbjct: 2816108 EIWEDRYRCL*RCCQSIYRPNLV*QRSCS*QALGNQCQILYTSPAGKAS 2816254
>gb|AY174529.1| Arabidopsis thaliana isolate KNO10 short chain alcohol
dehydrogenase (SCADH) gene, partial cds
Length = 1363
Score = 80.3 bits (169), Expect(5) = 6e-053
Identities = 33/51 (64%), Positives = 41/51 (80%)
Frame = +1 / +2
Query: 298 VKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINVKASILLIQDAAP 450
++ +G IDI+V NAAANPS D IL KE+VLDKLW+INVK+SILL+Q P
Sbjct: 632 IQKYGKIDIVVCNAAANPSTDPILSSKEAVLDKLWEINVKSSILLLQVKLP 784
Score = 62.5 bits (130), Expect(5) = 6e-053
Identities = 25/46 (54%), Positives = 29/46 (63%)
Frame = +1 / +2
Query: 427 LLIQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTALFGLTK 564
L QD APHL KG AG++P+ + MYGVTKTAL GLTK
Sbjct: 857 LFYQDMAPHLEKGSSVIFITSIAGFSPQGAMAMYGVTKTALLGLTK 994
Score = 61.6 bits (128), Expect(5) = 6e-053
Identities = 23/40 (57%), Positives = 31/40 (77%)
Frame = +1 / +1
Query: 547 LFGLTKALAGEMGPDTRVNCIAPGFVPTRFASFLTENETI 666
++ + +ALA EM PDTRVN +APGFVPT FASF+T + +
Sbjct: 1057 IYHVFQALAAEMAPDTRVNAVAPGFVPTHFASFITGSSEV 1176
Score = 56.5 bits (117), Expect(5) = 6e-053
Identities = 23/40 (57%), Positives = 31/40 (77%)
Frame = +1 / +2
Query: 184 QKNVNEAVEGLRAKGITAVGAVCHVSDAQQRKSLIETAVK 303
Q NV+EAV L++KGI A G VCHVS+AQ R++L+E V+
Sbjct: 332 QANVDEAVAKLKSKGIDAYGIVCHVSNAQHRRNLVEKTVQ 451
Score = 46.4 bits (95), Expect(4) = 8e-023
Identities = 24/39 (61%), Positives = 25/39 (64%)
Frame = -1 / -2
Query: 299 TAVSMRLLRCCASETWQTAPTAVIPLALSPSTASFTFFC 183
T S RL RC A ET QT P A IPL LS +TAS TF C
Sbjct: 447 TVFSTRLRRC*ALET*QTIPYASIPLDLSFATASSTFAC 331
Score = 46.4 bits (95), Expect(4) = 8e-023
Identities = 22/38 (57%), Positives = 27/38 (71%)
Frame = -1 / -2
Query: 422 EALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCP 309
E LTLIS SLSRT S + + S +G AAAL+T IS+ P
Sbjct: 756 EDLTLISQSLSRTASLLDKIGSVDGLAAALQTTISIFP 643
Score = 41.8 bits (85), Expect(4) = 8e-023
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = -1 / -2
Query: 560 VRPKRAVFVTPYIVNPCSGL*PAIEEIIITDDPF 459
V P+RAV VTPYI G PAIE + IT++PF
Sbjct: 990 VSPRRAVLVTPYIAIAPCGENPAIEVMKITEEPF 889
Score = 37.3 bits (75), Expect(4) = 8e-023
Identities = 18/27 (66%), Positives = 18/27 (66%)
Frame = -1 / -3
Query: 644 KLANRVGTKPGAIQLTRVSGPISPARA 564
K A VGTKPGA TRVSG IS A A
Sbjct: 1154 KEAKCVGTKPGATAFTRVSGAISAASA 1074
Score = 32.7 bits (65), Expect(5) = 6e-053
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +3 / +2
Query: 672 RA*REDQA*EIGYCGRHGC 728
R *RED A*++G GRHGC
Sbjct: 1277 RY*REDSA*QVGNNGRHGC 1333
>gb|AY174530.1| Arabidopsis thaliana isolate CIBC6 short chain alcohol
dehydrogenase (SCADH) gene, partial cds
Length = 1363
Score = 80.3 bits (169), Expect(5) = 6e-053
Identities = 33/51 (64%), Positives = 41/51 (80%)
Frame = +1 / +2
Query: 298 VKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINVKASILLIQDAAP 450
++ +G IDI+V NAAANPS D IL KE+VLDKLW+INVK+SILL+Q P
Sbjct: 632 IQKYGKIDIVVCNAAANPSTDPILSSKEAVLDKLWEINVKSSILLLQVKLP 784
Score = 62.5 bits (130), Expect(5) = 6e-053
Identities = 25/46 (54%), Positives = 29/46 (63%)
Frame = +1 / +2
Query: 427 LLIQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTALFGLTK 564
L QD APHL KG AG++P+ + MYGVTKTAL GLTK
Sbjct: 857 LFYQDMAPHLEKGSSVIFITSIAGFSPQGAMAMYGVTKTALLGLTK 994
Score = 61.6 bits (128), Expect(5) = 6e-053
Identities = 23/40 (57%), Positives = 31/40 (77%)
Frame = +1 / +1
Query: 547 LFGLTKALAGEMGPDTRVNCIAPGFVPTRFASFLTENETI 666
++ + +ALA EM PDTRVN +APGFVPT FASF+T + +
Sbjct: 1057 IYHVFQALAAEMAPDTRVNAVAPGFVPTHFASFITGSSEV 1176
Score = 56.5 bits (117), Expect(5) = 6e-053
Identities = 23/40 (57%), Positives = 31/40 (77%)
Frame = +1 / +2
Query: 184 QKNVNEAVEGLRAKGITAVGAVCHVSDAQQRKSLIETAVK 303
Q NV+EAV L++KGI A G VCHVS+AQ R++L+E V+
Sbjct: 332 QANVDEAVAKLKSKGIDAYGIVCHVSNAQHRRNLVEKTVQ 451
Score = 46.4 bits (95), Expect(4) = 8e-023
Identities = 24/39 (61%), Positives = 25/39 (64%)
Frame = -1 / -2
Query: 299 TAVSMRLLRCCASETWQTAPTAVIPLALSPSTASFTFFC 183
T S RL RC A ET QT P A IPL LS +TAS TF C
Sbjct: 447 TVFSTRLRRC*ALET*QTIPYASIPLDLSFATASSTFAC 331
Score = 46.4 bits (95), Expect(4) = 8e-023
Identities = 22/38 (57%), Positives = 27/38 (71%)
Frame = -1 / -2
Query: 422 EALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCP 309
E LTLIS SLSRT S + + S +G AAAL+T IS+ P
Sbjct: 756 EDLTLISQSLSRTASLLDKIGSVDGLAAALQTTISIFP 643
Score = 41.8 bits (85), Expect(4) = 8e-023
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = -1 / -2
Query: 560 VRPKRAVFVTPYIVNPCSGL*PAIEEIIITDDPF 459
V P+RAV VTPYI G PAIE + IT++PF
Sbjct: 990 VSPRRAVLVTPYIAIAPCGENPAIEVMKITEEPF 889
Score = 37.3 bits (75), Expect(4) = 8e-023
Identities = 18/27 (66%), Positives = 18/27 (66%)
Frame = -1 / -3
Query: 644 KLANRVGTKPGAIQLTRVSGPISPARA 564
K A VGTKPGA TRVSG IS A A
Sbjct: 1154 KEAKCVGTKPGATAFTRVSGAISAASA 1074
Score = 32.7 bits (65), Expect(5) = 6e-053
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +3 / +2
Query: 672 RA*REDQA*EIGYCGRHGC 728
R *RED A*++G GRHGC
Sbjct: 1277 RY*REDSA*QVGNNGRHGC 1333
>gb|AY174528.1| Arabidopsis thaliana isolate PUZ16 short chain alcohol
dehydrogenase (SCADH) gene, partial cds
Length = 1358
Score = 80.3 bits (169), Expect(5) = 1e-052
Identities = 33/51 (64%), Positives = 41/51 (80%)
Frame = +1 / +3
Query: 298 VKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINVKASILLIQDAAP 450
++ +G IDI+V NAAANPS D IL KE+VLDKLW+INVK+SILL+Q P
Sbjct: 627 IQKYGKIDIVVCNAAANPSTDPILSSKEAVLDKLWEINVKSSILLLQVKLP 779
Score = 62.5 bits (130), Expect(5) = 1e-052
Identities = 25/46 (54%), Positives = 29/46 (63%)
Frame = +1 / +3
Query: 427 LLIQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTALFGLTK 564
L QD APHL KG AG++P+ + MYGVTKTAL GLTK
Sbjct: 852 LFYQDMAPHLEKGSSVIFITSIAGFSPQGAMAMYGVTKTALLGLTK 989
Score = 60.6 bits (126), Expect(5) = 1e-052
Identities = 23/35 (65%), Positives = 28/35 (80%)
Frame = +1 / +2
Query: 562 KALAGEMGPDTRVNCIAPGFVPTRFASFLTENETI 666
+ALA EM PDTRVN +APGFVPT FASF+T + +
Sbjct: 1067 QALAAEMAPDTRVNAVAPGFVPTHFASFITGSSEV 1171
Score = 56.5 bits (117), Expect(5) = 1e-052
Identities = 23/40 (57%), Positives = 31/40 (77%)
Frame = +1 / +2
Query: 184 QKNVNEAVEGLRAKGITAVGAVCHVSDAQQRKSLIETAVK 303
Q NV+EAV L++KGI A G VCHVS+AQ R++L+E V+
Sbjct: 332 QANVDEAVAKLKSKGIDAYGIVCHVSNAQHRRNLVEKTVQ 451
Score = 46.4 bits (95), Expect(4) = 8e-023
Identities = 24/39 (61%), Positives = 25/39 (64%)
Frame = -1 / -3
Query: 299 TAVSMRLLRCCASETWQTAPTAVIPLALSPSTASFTFFC 183
T S RL RC A ET QT P A IPL LS +TAS TF C
Sbjct: 447 TVFSTRLRRC*ALET*QTIPYASIPLDLSFATASSTFAC 331
Score = 46.4 bits (95), Expect(4) = 8e-023
Identities = 22/38 (57%), Positives = 27/38 (71%)
Frame = -1 / -2
Query: 422 EALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCP 309
E LTLIS SLSRT S + + S +G AAAL+T IS+ P
Sbjct: 751 EDLTLISQSLSRTASLLDKIGSVDGLAAALQTTISIFP 638
Score = 41.8 bits (85), Expect(4) = 8e-023
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = -1 / -2
Query: 560 VRPKRAVFVTPYIVNPCSGL*PAIEEIIITDDPF 459
V P+RAV VTPYI G PAIE + IT++PF
Sbjct: 985 VSPRRAVLVTPYIAIAPCGENPAIEVMKITEEPF 884
Score = 37.3 bits (75), Expect(4) = 8e-023
Identities = 18/27 (66%), Positives = 18/27 (66%)
Frame = -1 / -3
Query: 644 KLANRVGTKPGAIQLTRVSGPISPARA 564
K A VGTKPGA TRVSG IS A A
Sbjct: 1149 KEAKCVGTKPGATAFTRVSGAISAASA 1069
Score = 32.7 bits (65), Expect(5) = 1e-052
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +3 / +3
Query: 672 RA*REDQA*EIGYCGRHGC 728
R *RED A*++G GRHGC
Sbjct: 1272 RY*REDSA*QVGNNGRHGC 1328
>gb|AY174531.1| Arabidopsis thaliana isolate GOT16 short chain alcohol
dehydrogenase (SCADH) gene, partial cds
Length = 1359
Score = 80.3 bits (169), Expect(5) = 1e-052
Identities = 33/51 (64%), Positives = 41/51 (80%)
Frame = +1 / +1
Query: 298 VKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINVKASILLIQDAAP 450
++ +G IDI+V NAAANPS D IL KE+VLDKLW+INVK+SILL+Q P
Sbjct: 628 IQKYGKIDIVVCNAAANPSTDPILSSKEAVLDKLWEINVKSSILLLQVKLP 780
Score = 62.5 bits (130), Expect(5) = 1e-052
Identities = 25/46 (54%), Positives = 29/46 (63%)
Frame = +1 / +1
Query: 427 LLIQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTALFGLTK 564
L QD APHL KG AG++P+ + MYGVTKTAL GLTK
Sbjct: 853 LFYQDMAPHLEKGSSVIFITSIAGFSPQGAMAMYGVTKTALLGLTK 990
Score = 60.6 bits (126), Expect(5) = 1e-052
Identities = 23/35 (65%), Positives = 28/35 (80%)
Frame = +1 / +3
Query: 562 KALAGEMGPDTRVNCIAPGFVPTRFASFLTENETI 666
+ALA EM PDTRVN +APGFVPT FASF+T + +
Sbjct: 1068 QALAAEMAPDTRVNAVAPGFVPTHFASFITGSSEV 1172
Score = 56.5 bits (117), Expect(5) = 1e-052
Identities = 23/40 (57%), Positives = 31/40 (77%)
Frame = +1 / +2
Query: 184 QKNVNEAVEGLRAKGITAVGAVCHVSDAQQRKSLIETAVK 303
Q NV+EAV L++KGI A G VCHVS+AQ R++L+E V+
Sbjct: 332 QANVDEAVAKLKSKGIDAYGIVCHVSNAQHRRNLVEKTVQ 451
Score = 46.4 bits (95), Expect(4) = 8e-023
Identities = 24/39 (61%), Positives = 25/39 (64%)
Frame = -1 / -1
Query: 299 TAVSMRLLRCCASETWQTAPTAVIPLALSPSTASFTFFC 183
T S RL RC A ET QT P A IPL LS +TAS TF C
Sbjct: 447 TVFSTRLRRC*ALET*QTIPYASIPLDLSFATASSTFAC 331
Score = 46.4 bits (95), Expect(4) = 8e-023
Identities = 22/38 (57%), Positives = 27/38 (71%)
Frame = -1 / -2
Query: 422 EALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCP 309
E LTLIS SLSRT S + + S +G AAAL+T IS+ P
Sbjct: 752 EDLTLISQSLSRTASLLDKIGSVDGLAAALQTTISIFP 639
Score = 41.8 bits (85), Expect(4) = 8e-023
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = -1 / -2
Query: 560 VRPKRAVFVTPYIVNPCSGL*PAIEEIIITDDPF 459
V P+RAV VTPYI G PAIE + IT++PF
Sbjct: 986 VSPRRAVLVTPYIAIAPCGENPAIEVMKITEEPF 885
Score = 37.3 bits (75), Expect(4) = 8e-023
Identities = 18/27 (66%), Positives = 18/27 (66%)
Frame = -1 / -3
Query: 644 KLANRVGTKPGAIQLTRVSGPISPARA 564
K A VGTKPGA TRVSG IS A A
Sbjct: 1150 KEAKCVGTKPGATAFTRVSGAISAASA 1070
Score = 32.7 bits (65), Expect(5) = 1e-052
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +3 / +1
Query: 672 RA*REDQA*EIGYCGRHGC 728
R *RED A*++G GRHGC
Sbjct: 1273 RY*REDSA*QVGNNGRHGC 1329
>gb|AV782008.1|AV782008 AV782008 RAFL4 Arabidopsis thaliana cDNA clone RAFL04-12-P17 3',
mRNA sequence
Length = 669
Score = 186 bits (401), Expect = 9e-046
Identities = 79/137 (57%), Positives = 94/137 (68%)
Frame = +1 / -3
Query: 406 INVKASILLIQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTALFGLTKALAGEMG 585
INVK+SILL+QD APHL KG AG++P+ + MYGVTKTAL GLTKALA EM
Sbjct: 667 INVKSSILLLQDMAPHLEKGSSVIFITSIAGFSPQGAMAMYGVTKTALLGLTKALAAEMA 488
Query: 586 PDTRVNCIAPGFVPTRFASFLTENETIRKELNERTKLKRLGTVEDMXXXXXXXXXXXXXY 765
PDTRVN +APGFVPT FASF+T + +R+ + E+T L RLGT DM Y
Sbjct: 487 PDTRVNAVAPGFVPTHFASFITGSSEVREGIEEKTLLNRLGTTGDMAAAAAFLASDDSSY 308
Query: 766 ITAETIVVAGGVQSRL* 816
IT ET+VVAGG+ SRL*
Sbjct: 307 ITGETLVVAGGMPSRL* 257
Score = 79.9 bits (168), Expect(2) = 8e-021
Identities = 34/80 (42%), Positives = 46/80 (57%)
Frame = +3 / -2
Query: 414 QGFYPSYSGCCSSPTEGVICDYYFFNCWLQSRTRIDNVWCHKDCSLWSHEGSCW*DGTRY 593
Q Y S +G SSP EG C + F CW+ + VWCH +CS ++ G+C *DG RY
Sbjct: 659 QILYTSPAGYGSSP*EGFFCYLHNFYCWIFTTRSYGYVWCH*NCSSRTN*GACC*DGPRY 480
Query: 594 SC*LYSPWFCSYTVC*FPHR 653
+C FC++T+C F HR
Sbjct: 479 TCERSCTRFCAHTLCFFHHR 420
Score = 43.2 bits (88), Expect(2) = 8e-021
Identities = 21/49 (42%), Positives = 27/49 (55%)
Frame = +3 / -2
Query: 672 RA*REDQA*EIGYCGRHGCGCGFSGV*RRIIHYG*NHCCCWRGAV*AVN 818
R *RED A*++G GRHGC F + +H+ N C WR A +N
Sbjct: 401 RY*REDSA*QVGNNGRHGCCGCFLSIR*FFLHHWRNFGCRWRNAFKTLN 255
>gb|T21872.1|T21872 3880 Lambda-PRL2 Arabidopsis thaliana cDNA clone 103N7T7, mRNA
sequence
Length = 565
Score = 173 bits (373), Expect(2) = 3e-045
Identities = 76/110 (69%), Positives = 89/110 (80%)
Frame = +1 / +2
Query: 70 RRLEGKVAIVTASTMGIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGITAVGAV 249
RRLEGKVAIVTAST GIG I ER GLEGA+VV+SSRKQ NV+EAV L++KGI A G V
Sbjct: 38 RRLEGKVAIVTASTQGIGFGITERFGLEGASVVVSSRKQANVDEAVAKLKSKGIDAYGIV 217
Query: 250 CHVSDAQQRKSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKL 399
CHVS+AQ R++L+E V+ +G IDI+V NAAANPS D IL KE+VLDKL
Sbjct: 218 CHVSNAQHRRNLVEKTVQKYGKIDIVVCNAAANPSTDPILSSKEAVLDKL 367
Score = 31.3 bits (62), Expect(2) = 3e-045
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1 / +3
Query: 376 KESVLDKLWDINVKASILLIQ 438
K+ L W+INVK+SILL+Q
Sbjct: 345 KKLFLTSFWEINVKSSILLLQ 407
>gb|Z18000.1|Z18000 ATTS0484 AC16H Arabidopsis thaliana cDNA clone TASG134 5', mRNA
sequence
Length = 359
Score = 169 bits (363), Expect(2) = 6e-043
Identities = 72/108 (66%), Positives = 87/108 (80%)
Frame = +1 / +2
Query: 103 ASTMGIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGITAVGAVCHVSDAQQRKS 282
AST GIG I ER GLEGA+VV+SSRKQ NV+EAV L++KGI A G VCHVS+AQ R++
Sbjct: 35 ASTQGIGFGITERFGLEGASVVVSSRKQANVDEAVAKLKSKGIDAYGIVCHVSNAQHRRN 214
Query: 283 LIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINVKASI 426
L+E V+ +G IDI+V NAAANPS D IL KE+VLDKLW+INVK+SI
Sbjct: 215 LVEKTVQKYGKIDIVVCNAAANPSTDPILSSKEAVLDKLWEINVKSSI 358
Score = 28.1 bits (55), Expect(2) = 6e-043
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +1 / +3
Query: 70 RRLEGKVAIVTASTMGI 120
RRLEGKVAIVT G+
Sbjct: 3 RRLEGKVAIVTLRRKGL 53
>gb|Z47605.1|Z47605 ATTS4461 AC16H Arabidopsis thaliana cDNA clone TAI134 5', mRNA
sequence
Length = 359
Score = 169 bits (363), Expect(2) = 6e-043
Identities = 72/108 (66%), Positives = 87/108 (80%)
Frame = +1 / +2
Query: 103 ASTMGIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGITAVGAVCHVSDAQQRKS 282
AST GIG I ER GLEGA+VV+SSRKQ NV+EAV L++KGI A G VCHVS+AQ R++
Sbjct: 35 ASTQGIGFGITERFGLEGASVVVSSRKQANVDEAVAKLKSKGIDAYGIVCHVSNAQHRRN 214
Query: 283 LIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINVKASI 426
L+E V+ +G IDI+V NAAANPS D IL KE+VLDKLW+INVK+SI
Sbjct: 215 LVEKTVQKYGKIDIVVCNAAANPSTDPILSSKEAVLDKLWEINVKSSI 358
Score = 28.1 bits (55), Expect(2) = 6e-043
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +1 / +3
Query: 70 RRLEGKVAIVTASTMGI 120
RRLEGKVAIVT G+
Sbjct: 3 RRLEGKVAIVTLRRKGL 53
>gb|BP862826.1|BP862826 BP862826 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-64-I21 5',
mRNA sequence
Length = 395
Score = 158 bits (339), Expect = 3e-037
Identities = 69/103 (66%), Positives = 81/103 (78%)
Frame = +1 / +1
Query: 70 RRLEGKVAIVTASTMGIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGITAVGAV 249
RRLEGKV IVTAST GIG I ER GLEGA+VV+SSRKQ NV+EAV L++KGI A G V
Sbjct: 85 RRLEGKVGIVTASTQGIGFGITERFGLEGASVVVSSRKQANVDEAVAKLKSKGIDAYGIV 264
Query: 250 CHVSDAQQRKSLIETAVKSFGHIDILVSNAAANPSVDSILEMK 378
CHVS+AQ R++L+E V+ +G IDI+V NAAANPS D IL K
Sbjct: 265 CHVSNAQNRRNLVEKRVQKYGKIDIVVCNAAANPSTDPILSSK 393
>gb|BP866649.1|BP866649 BP866649 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-78-H04 5',
mRNA sequence
Length = 396
Score = 147 bits (316), Expect = 5e-034
Identities = 64/93 (68%), Positives = 76/93 (81%)
Frame = +1 / +1
Query: 70 RRLEGKVAIVTASTMGIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGITAVGAV 249
RRLEGKVAIVTAST GIG I ER GLEGA+VV+SSRKQ NV+EAV L++KGI A G V
Sbjct: 88 RRLEGKVAIVTASTQGIGFGITERFGLEGASVVVSSRKQANVDEAVAKLKSKGIDAYGMV 267
Query: 250 CHVSDAQQRKSLIETAVKSFGHIDILVSNAAAN 348
CHVS+AQ R++L+E V+ +G IDI+V NAAAN
Sbjct: 268 CHVSNAQHRRNLVEKTVQKYGKIDIVVCNAAAN 366
>gb|BP867954.1|BP867954 BP867954 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-82-L18 5',
mRNA sequence
Length = 380
Score = 85.4 bits (180), Expect(2) = 2e-030
Identities = 37/53 (69%), Positives = 44/53 (83%)
Frame = +1 / +3
Query: 70 RRLEGKVAIVTASTMGIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKG 228
RR EGKVA+VTAST G+G I ER GLEGA+VV+SSRKQ NV+EAV L++KG
Sbjct: 78 RRWEGKVAMVTASTQGMGFGITERFGLEGASVVVSSRKQANVDEAVAKLKSKG 236
Score = 70.3 bits (147), Expect(2) = 2e-030
Identities = 28/48 (58%), Positives = 36/48 (75%)
Frame = +1 / +2
Query: 223 KGITAVGAVCHVSDAQQRKSLIETAVKSFGHIDILVSNAAANPSVDSI 366
KG+ A G VCHVS+AQ R++L+E V+ +G IDI+V NA ANPS D I
Sbjct: 230 KGMDAYGIVCHVSNAQHRRNLVEKRVQKYGKIDIVVCNAGANPSTDPI 373
>gb|BP596017.1|BP596017 BP596017 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-32-G07 3',
mRNA sequence
Length = 453
Score = 132 bits (283), Expect = 2e-029
Identities = 57/95 (60%), Positives = 66/95 (69%)
Frame = +1 / -1
Query: 532 VTKTALFGLTKALAGEMGPDTRVNCIAPGFVPTRFASFLTENETIRKELNERTKLKRLGT 711
VTKTAL GLTKALA EM PDTRVN +APGFVPT FASF+T + +R+ + E+T L RLGT
Sbjct: 453 VTKTALLGLTKALAAEMAPDTRVNAVAPGFVPTHFASFITGSSEVREGIEEKTLLNRLGT 274
Query: 712 VEDMXXXXXXXXXXXXXYITAETIVVAGGVQSRL* 816
DM YIT ET+VVAGG+ SRL*
Sbjct: 273 TGDMAAAAAFLASDDSSYITGETLVVAGGMPSRL* 169
>gb|BP820249.1|BP820249 BP820249 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-53-O15 5',
mRNA sequence
Length = 407
Score = 75.8 bits (159), Expect(2) = 3e-029
Identities = 31/55 (56%), Positives = 43/55 (78%)
Frame = +1 / +3
Query: 184 QKNVNEAVEGLRAKGITAVGAVCHVSDAQQRKSLIETAVKSFGHIDILVSNAAAN 348
++ V+EAV L++KGI A G VCHVS+AQ R++L+E V+ +G IDI+V NAAAN
Sbjct: 204 RQTVDEAVAKLKSKGIDAYGIVCHVSNAQHRRNLVEKTVQKYGKIDIVVCNAAAN 368
Score = 75.8 bits (159), Expect(2) = 3e-029
Identities = 33/41 (80%), Positives = 35/41 (85%)
Frame = +1 / +2
Query: 70 RRLEGKVAIVTASTMGIGLAIAERLGLEGAAVVISSRKQKN 192
RRLEGKVAIVTAST GIG I ER GLEGA+VV+SSRKQ N
Sbjct: 89 RRLEGKVAIVTASTQGIGFGITERFGLEGASVVVSSRKQAN 211
>gb|H36166.1|H36166 14688 Lambda-PRL2 Arabidopsis thaliana cDNA clone 175B22T7, mRNA
sequence
Length = 431
Score = 124 bits (265), Expect = 5e-027
Identities = 54/85 (63%), Positives = 65/85 (76%)
Frame = +1 / +2
Query: 70 RRLEGKVAIVTASTMGIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGITAVGAV 249
RRLEGKVAIVTAST GIG I ER GLEGA+VV+SSRKQ N +EAV L++KGI A G V
Sbjct: 44 RRLEGKVAIVTASTQGIGFGITERFGLEGASVVVSSRKQANXDEAVAKLKSKGIDAYGIV 223
Query: 250 CHVSDAQQRKSLIETAVKSFGHIDI 324
CHVS+AQ ++L+ V+ +G DI
Sbjct: 224 CHVSNAQHXRNLVGKTVQKYGKXDI 298
>gb|BP861941.1|BP861941 BP861941 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-49-G05 5',
mRNA sequence
Length = 395
Score = 99.1 bits (210), Expect(2) = 2e-025
Identities = 42/68 (61%), Positives = 52/68 (76%)
Frame = +1 / +2
Query: 178 RKQKNVNEAVEGLRAKGITAVGAVCHVSDAQQRKSLIETAVKSFGHIDILVSNAAANPSV 357
RKQ NV+EAV L++KGI A G VCHVS+AQ R++L+E V+ +G IDI+V NAAANPS
Sbjct: 191 RKQANVDEAVAKLKSKGIDAYGIVCHVSNAQHRRNLVEKTVQKYGKIDIVVCNAAANPST 370
Query: 358 DSILEMKE 381
D IL KE
Sbjct: 371 DPILSSKE 394
Score = 39.6 bits (80), Expect(2) = 2e-025
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +1 / +2
Query: 70 RRLEGKVAIVTASTMGIG 123
RRLEGKVAIVTAST GIG
Sbjct: 86 RRLEGKVAIVTASTQGIG 139
>gb|B62113.1|B62113 T20H22TF TAMU Arabidopsis thaliana genomic clone T20H22, DNA
sequence
Length = 592
Score = 62.5 bits (130), Expect(3) = 1e-024
Identities = 25/46 (54%), Positives = 29/46 (63%)
Frame = +1 / +1
Query: 427 LLIQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTALFGLTK 564
L QD APHL KG AG++P+ + MYGVTKTAL GLTK
Sbjct: 124 LFYQDMAPHLEKGSSVIFITSIAGFSPQGAMAMYGVTKTALLGLTK 261
Score = 61.6 bits (128), Expect(3) = 1e-024
Identities = 23/40 (57%), Positives = 31/40 (77%)
Frame = +1 / +3
Query: 547 LFGLTKALAGEMGPDTRVNCIAPGFVPTRFASFLTENETI 666
++ + +ALA EM PDTRVN +APGFVPT FASF+T + +
Sbjct: 324 IYHVFQALAAEMAPDTRVNAVAPGFVPTHFASFITGSSEV 443
Score = 29.5 bits (58), Expect(3) = 1e-024
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1 / +1
Query: 400 WDINVKASILLIQDAAP 450
W+INVK+SILL+Q P
Sbjct: 1 WEINVKSSILLLQVKLP 51
>gb|BP864362.1|BP864362 BP864362 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-70-A06 5',
mRNA sequence
Length = 371
Score = 78.5 bits (165), Expect(2) = 2e-024
Identities = 34/46 (73%), Positives = 39/46 (84%)
Frame = +1 / +1
Query: 70 RRLEGKVAIVTASTMGIGLAIAERLGLEGAAVVISSRKQKNVNEAV 207
RR EGKVA+VTAST G+G I ER GLEGA+VV+SSRKQ NV+EAV
Sbjct: 43 RRWEGKVAMVTASTQGMGFGITERFGLEGASVVVSSRKQANVDEAV 180
Score = 56.5 bits (117), Expect(2) = 2e-024
Identities = 23/40 (57%), Positives = 31/40 (77%)
Frame = +1 / +1
Query: 277 KSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDK 396
++L+E V+ +G IDI+V NAAANPS D IL KE+VL+K
Sbjct: 250 RNLVEKRVQKYGKIDIVVCNAAANPSTDPILSSKEAVLEK 369
>gb|BP831739.1|BP831739 BP831739 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-90-A05 5',
mRNA sequence
Length = 360
Score = 109 bits (232), Expect(2) = 3e-024
Identities = 47/76 (61%), Positives = 59/76 (77%)
Frame = +1 / +3
Query: 115 GIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGITAVGAVCHVSDAQQRKSLIET 294
G G I ERLGLEGA+ V+SSRKQ NV+EAV L++KGI A G VCHVS+AQ R++L+E
Sbjct: 132 GDGFGITERLGLEGASGVVSSRKQANVDEAVAKLKSKGIDAYGIVCHVSNAQHRRNLVEK 311
Query: 295 AVKSFGHIDILVSNAA 342
V+ +G IDI+V NAA
Sbjct: 312 TVQKYGKIDIVVCNAA 359
Score = 25.4 bits (49), Expect(2) = 3e-024
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +1 / +2
Query: 70 RRLEGKVAIVTA 105
RR EGKVAIVTA
Sbjct: 89 RRWEGKVAIVTA 124
>emb|AL092247.1|CNS00VG9 Arabidopsis thaliana genome survey sequence T7 end of BAC T9J5 of
TAMU library from strain Columbia of Arabidopsis
thaliana, genomic survey sequence
Length = 600
Score = 62.5 bits (130), Expect(3) = 1e-022
Identities = 25/46 (54%), Positives = 29/46 (63%)
Frame = +1 / +1
Query: 427 LLIQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTALFGLTK 564
L QD APHL KG AG++P+ + MYGVTKTAL GLTK
Sbjct: 124 LFYQDMAPHLEKGSSVIFITSIAGFSPQGAMAMYGVTKTALLGLTK 261
Score = 54.7 bits (113), Expect(3) = 1e-022
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +1 / +3
Query: 547 LFGLTKALAGEMGPDTRVNCIAPGFVPTRFASFLTENETI 666
++ + +ALA EM PDTRVN +APGF T FASF+T + +
Sbjct: 324 IYHVFQALAAEMAPDTRVNAVAPGFGATHFASFITGSSEV 443
Score = 29.5 bits (58), Expect(3) = 1e-022
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1 / +1
Query: 400 WDINVKASILLIQDAAP 450
W+INVK+SILL+Q P
Sbjct: 1 WEINVKSSILLLQVKLP 51
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,575,613,196
Number of Sequences: 1013581
Number of extensions: 19838277
Number of successful extensions: 126400
Number of sequences better than 1.0e-020: 35
length of database: 302,980,290
effective HSP length: 57
effective length of database: 245,206,173
effective search space used: 66941285229
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)