TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3067043.2.1
(834 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AY065238.1| Arabidopsis thaliana putative chorismate mut... 177 2e-054
ref|NM_121125.2| Arabidopsis thaliana ATCM2; chorismate mut... 177 2e-054
emb|AX343933.1| Sequence 3 from Patent WO0200901 177 2e-054
emb|AX464575.1| Sequence 3 from Patent WO0202798 177 2e-054
emb|AX464581.1| Sequence 9 from Patent WO0202798 177 2e-054
gb|L47355.1| Arabidopsis thaliana chorismate mutase mRNA, c... 177 2e-054
gb|AY133840.1| Arabidopsis thaliana clone U18739 putative c... 177 2e-054
emb|AX506277.1| Sequence 972 from Patent WO0216655 177 2e-054
gb|BT005306.1| Arabidopsis thaliana At1g69370 mRNA, complet... 214 4e-054
dbj|AK117860.1| Arabidopsis thaliana At1g69370 mRNA for put... 214 4e-054
ref|NM_105604.2| Arabidopsis thaliana CM3 (CHORISMATE MUTAS... 214 4e-054
gb|AF131219.1|AF131219 Arabidopsis thaliana chorismate muta... 210 7e-053
emb|AX464576.1| Sequence 4 from Patent WO0202798 210 7e-053
emb|AX464582.1| Sequence 10 from Patent WO0202798 210 7e-053
ref|NM_113844.3| Arabidopsis thaliana CM1; chorismate mutas... 163 1e-049
emb|AX506042.1| Sequence 737 from Patent WO0216655 163 1e-049
emb|AX464574.1| Sequence 2 from Patent WO0202798 162 3e-049
emb|AX464580.1| Sequence 8 from Patent WO0202798 162 3e-049
emb|Z26519.1|ATCHMUT A.thaliana mRNA for chorismate mutase 162 3e-049
emb|BX822129.1|CNS0A727 Arabidopsis thaliana Full-length cD... 161 4e-049
emb|BX824460.1|CNS0A6WL Arabidopsis thaliana Full-length cD... 160 9e-049
gb|AY089156.1| Arabidopsis thaliana clone 39613 mRNA, compl... 163 8e-048
emb|AL365234.1|ATT30N20 Arabidopsis thaliana DNA chromosome... 74 5e-040
emb|AJ242648.1|ATH242648 Arabidopsis thaliana CM2 gene for ... 74 6e-040
emb|AX464578.1| Sequence 6 from Patent WO0202798 74 6e-040
gb|BX840398.1|BX840398 BX840398 Arabidopsis thaliana Hormon... 159 1e-037
gb|BX839097.1|BX839097 BX839097 Arabidopsis thaliana Adult ... 155 2e-036
gb|AV541889.1|AV541889 AV541889 Arabidopsis thaliana roots ... 149 1e-034
emb|AX464577.1| Sequence 5 from Patent WO0202798 61 3e-033
emb|AJ242647.1|ATH242647 Arabidopsis thaliana CM1 gene for ... 61 3e-033
dbj|AB026657.1| Arabidopsis thaliana genomic DNA, chromosom... 61 2e-030
gb|AC018364.5|AC018364 Arabidopsis thaliana chromosome 1 BA... 79 1e-024
gb|AC073178.9|AC073178 Arabidopsis thaliana chromosome 1 BA... 79 1e-024
gb|AI995910.1|AI995910 701549173 A. thaliana, Columbia Col-... 73 1e-021
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 54 2e-021
>gb|AY065238.1| Arabidopsis thaliana putative chorismate mutase CM2 (At5g10870)
mRNA, complete cds
Length = 1055
Score = 177 bits (381), Expect(2) = 2e-054
Identities = 74/149 (49%), Positives = 92/149 (61%)
Frame = +3 / +3
Query: 3 EAEALNAKAXHYQKPEDVPFFPQDLPSPLFPTKPSPKVLHPFASLVTVNDAIWKMYFDEL 182
E E + AK Y+ PE+ PFF +++P +FPT P LHP A V +N IW +YF EL
Sbjct: 309 ETEIIQAKVGRYEYPEENPFFLENIPHSVFPTHKYPSALHPKALSVNINKQIWDIYFKEL 488
Query: 183 LPLFTVDGDDGSYAQTVALDLACLQVLSQRIHIGKYVAEVKFKDAPQEYSRLIKEKDSNS 362
LPLF GDDG+Y T A DLACLQ LS+RIH GK+VAEVKF+DAPQ+Y I+ +D +
Sbjct: 489 LPLFVKPGDDGNYPSTAASDLACLQALSRRIHYGKFVAEVKFRDAPQDYEPAIRAQDREA 668
Query: 363 LMDMLTFXXXXXXXXXXXXXXXXTFGQNV 449
LM +LTF TFGQ V
Sbjct: 669 LMKLLTFEKVEEMVKKRVQKKAETFGQEV 755
Score = 105 bits (224), Expect = 2e-021
Identities = 61/136 (44%), Positives = 71/136 (52%)
Frame = -3 / -2
Query: 448 TFCPNVXXXXXXXXXXXXXXXLNVSISIRELLSFSFISRLYS*GASLNFTSATYLPI*IL 269
T CPNV NV+ I+ LS + I+ S GASLN TSAT LP *IL
Sbjct: 754 TSCPNVSAFFCTLFLTISSTFSNVNSFIKASLS*ARIAGS*SCGASLNLTSATNLP**IL 575
Query: 268 CDRTCRHAKSSATVCA*LPSSPSTVNNGSNSSKYIFHIASFTVTNEAKGCKTFGEGFVGK 89
+R C+ A+S A V *LPSSP N GSNS K I I +T+ A GCK G VGK
Sbjct: 574 LERACKQARSLAAVDG*LPSSPGLTNKGSNSLK*ISQICLLMLTDRALGCKADGYLCVGK 395
Query: 88 RGEGRS*GKNGTSSGF 41
G K G SSG+
Sbjct: 394 TE*GMFSRKKGFSSGY 347
Score = 57.9 bits (120), Expect(2) = 2e-054
Identities = 23/33 (69%), Positives = 29/33 (87%)
Frame = +3 / +3
Query: 489 KVDPKVLSKLYDQWVMPLTKDVEVEYLLRRLD* 587
KVDP + S++Y +W++PLTK VEVEYLLRRLD*
Sbjct: 798 KVDPLLASRIYGEWLIPLTKLVEVEYLLRRLD* 896
>ref|NM_121125.2| Arabidopsis thaliana ATCM2; chorismate mutase AT5G10870 (ATCM2)
mRNA, complete cds
Length = 1041
Score = 177 bits (381), Expect(2) = 2e-054
Identities = 74/149 (49%), Positives = 92/149 (61%)
Frame = +3 / +3
Query: 3 EAEALNAKAXHYQKPEDVPFFPQDLPSPLFPTKPSPKVLHPFASLVTVNDAIWKMYFDEL 182
E E + AK Y+ PE+ PFF +++P +FPT P LHP A V +N IW +YF EL
Sbjct: 309 ETEIIQAKVGRYEYPEENPFFLENIPHSVFPTHKYPSALHPKALSVNINKQIWDIYFKEL 488
Query: 183 LPLFTVDGDDGSYAQTVALDLACLQVLSQRIHIGKYVAEVKFKDAPQEYSRLIKEKDSNS 362
LPLF GDDG+Y T A DLACLQ LS+RIH GK+VAEVKF+DAPQ+Y I+ +D +
Sbjct: 489 LPLFVKPGDDGNYPSTAASDLACLQALSRRIHYGKFVAEVKFRDAPQDYEPAIRAQDREA 668
Query: 363 LMDMLTFXXXXXXXXXXXXXXXXTFGQNV 449
LM +LTF TFGQ V
Sbjct: 669 LMKLLTFEKVEEMVKKRVQKKAETFGQEV 755
Score = 105 bits (224), Expect = 2e-021
Identities = 61/136 (44%), Positives = 71/136 (52%)
Frame = -3 / -3
Query: 448 TFCPNVXXXXXXXXXXXXXXXLNVSISIRELLSFSFISRLYS*GASLNFTSATYLPI*IL 269
T CPNV NV+ I+ LS + I+ S GASLN TSAT LP *IL
Sbjct: 754 TSCPNVSAFFCTLFLTISSTFSNVNSFIKASLS*ARIAGS*SCGASLNLTSATNLP**IL 575
Query: 268 CDRTCRHAKSSATVCA*LPSSPSTVNNGSNSSKYIFHIASFTVTNEAKGCKTFGEGFVGK 89
+R C+ A+S A V *LPSSP N GSNS K I I +T+ A GCK G VGK
Sbjct: 574 LERACKQARSLAAVDG*LPSSPGLTNKGSNSLK*ISQICLLMLTDRALGCKADGYLCVGK 395
Query: 88 RGEGRS*GKNGTSSGF 41
G K G SSG+
Sbjct: 394 TE*GMFSRKKGFSSGY 347
Score = 57.9 bits (120), Expect(2) = 2e-054
Identities = 23/33 (69%), Positives = 29/33 (87%)
Frame = +3 / +3
Query: 489 KVDPKVLSKLYDQWVMPLTKDVEVEYLLRRLD* 587
KVDP + S++Y +W++PLTK VEVEYLLRRLD*
Sbjct: 798 KVDPLLASRIYGEWLIPLTKLVEVEYLLRRLD* 896
>emb|AX343933.1| Sequence 3 from Patent WO0200901
Length = 1006
Score = 177 bits (381), Expect(2) = 2e-054
Identities = 74/149 (49%), Positives = 92/149 (61%)
Frame = +3 / +1
Query: 3 EAEALNAKAXHYQKPEDVPFFPQDLPSPLFPTKPSPKVLHPFASLVTVNDAIWKMYFDEL 182
E E + AK Y+ PE+ PFF +++P +FPT P LHP A V +N IW +YF EL
Sbjct: 274 ETEIIQAKVGRYEYPEENPFFLENIPHSVFPTHKYPSALHPKALSVNINKQIWDIYFKEL 453
Query: 183 LPLFTVDGDDGSYAQTVALDLACLQVLSQRIHIGKYVAEVKFKDAPQEYSRLIKEKDSNS 362
LPLF GDDG+Y T A DLACLQ LS+RIH GK+VAEVKF+DAPQ+Y I+ +D +
Sbjct: 454 LPLFVKPGDDGNYPSTAASDLACLQALSRRIHYGKFVAEVKFRDAPQDYEPAIRAQDREA 633
Query: 363 LMDMLTFXXXXXXXXXXXXXXXXTFGQNV 449
LM +LTF TFGQ V
Sbjct: 634 LMKLLTFEKVEEMVKKRVQKKAETFGQEV 720
Score = 105 bits (224), Expect = 2e-021
Identities = 61/136 (44%), Positives = 71/136 (52%)
Frame = -3 / -3
Query: 448 TFCPNVXXXXXXXXXXXXXXXLNVSISIRELLSFSFISRLYS*GASLNFTSATYLPI*IL 269
T CPNV NV+ I+ LS + I+ S GASLN TSAT LP *IL
Sbjct: 719 TSCPNVSAFFCTLFLTISSTFSNVNSFIKASLS*ARIAGS*SCGASLNLTSATNLP**IL 540
Query: 268 CDRTCRHAKSSATVCA*LPSSPSTVNNGSNSSKYIFHIASFTVTNEAKGCKTFGEGFVGK 89
+R C+ A+S A V *LPSSP N GSNS K I I +T+ A GCK G VGK
Sbjct: 539 LERACKQARSLAAVDG*LPSSPGLTNKGSNSLK*ISQICLLMLTDRALGCKADGYLCVGK 360
Query: 88 RGEGRS*GKNGTSSGF 41
G K G SSG+
Sbjct: 359 TE*GMFSRKKGFSSGY 312
Score = 57.9 bits (120), Expect(2) = 2e-054
Identities = 23/33 (69%), Positives = 29/33 (87%)
Frame = +3 / +1
Query: 489 KVDPKVLSKLYDQWVMPLTKDVEVEYLLRRLD* 587
KVDP + S++Y +W++PLTK VEVEYLLRRLD*
Sbjct: 763 KVDPLLASRIYGEWLIPLTKLVEVEYLLRRLD* 861
>emb|AX464575.1| Sequence 3 from Patent WO0202798
Length = 1006
Score = 177 bits (381), Expect(2) = 2e-054
Identities = 74/149 (49%), Positives = 92/149 (61%)
Frame = +3 / +1
Query: 3 EAEALNAKAXHYQKPEDVPFFPQDLPSPLFPTKPSPKVLHPFASLVTVNDAIWKMYFDEL 182
E E + AK Y+ PE+ PFF +++P +FPT P LHP A V +N IW +YF EL
Sbjct: 274 ETEIIQAKVGRYEYPEENPFFLENIPHSVFPTHKYPSALHPKALSVNINKQIWDIYFKEL 453
Query: 183 LPLFTVDGDDGSYAQTVALDLACLQVLSQRIHIGKYVAEVKFKDAPQEYSRLIKEKDSNS 362
LPLF GDDG+Y T A DLACLQ LS+RIH GK+VAEVKF+DAPQ+Y I+ +D +
Sbjct: 454 LPLFVKPGDDGNYPSTAASDLACLQALSRRIHYGKFVAEVKFRDAPQDYEPAIRAQDREA 633
Query: 363 LMDMLTFXXXXXXXXXXXXXXXXTFGQNV 449
LM +LTF TFGQ V
Sbjct: 634 LMKLLTFEKVEEMVKKRVQKKAETFGQEV 720
Score = 105 bits (224), Expect = 2e-021
Identities = 61/136 (44%), Positives = 71/136 (52%)
Frame = -3 / -3
Query: 448 TFCPNVXXXXXXXXXXXXXXXLNVSISIRELLSFSFISRLYS*GASLNFTSATYLPI*IL 269
T CPNV NV+ I+ LS + I+ S GASLN TSAT LP *IL
Sbjct: 719 TSCPNVSAFFCTLFLTISSTFSNVNSFIKASLS*ARIAGS*SCGASLNLTSATNLP**IL 540
Query: 268 CDRTCRHAKSSATVCA*LPSSPSTVNNGSNSSKYIFHIASFTVTNEAKGCKTFGEGFVGK 89
+R C+ A+S A V *LPSSP N GSNS K I I +T+ A GCK G VGK
Sbjct: 539 LERACKQARSLAAVDG*LPSSPGLTNKGSNSLK*ISQICLLMLTDRALGCKADGYLCVGK 360
Query: 88 RGEGRS*GKNGTSSGF 41
G K G SSG+
Sbjct: 359 TE*GMFSRKKGFSSGY 312
Score = 57.9 bits (120), Expect(2) = 2e-054
Identities = 23/33 (69%), Positives = 29/33 (87%)
Frame = +3 / +1
Query: 489 KVDPKVLSKLYDQWVMPLTKDVEVEYLLRRLD* 587
KVDP + S++Y +W++PLTK VEVEYLLRRLD*
Sbjct: 763 KVDPLLASRIYGEWLIPLTKLVEVEYLLRRLD* 861
>emb|AX464581.1| Sequence 9 from Patent WO0202798
Length = 1006
Score = 177 bits (381), Expect(2) = 2e-054
Identities = 74/149 (49%), Positives = 92/149 (61%)
Frame = +3 / -1
Query: 3 EAEALNAKAXHYQKPEDVPFFPQDLPSPLFPTKPSPKVLHPFASLVTVNDAIWKMYFDEL 182
E E + AK Y+ PE+ PFF +++P +FPT P LHP A V +N IW +YF EL
Sbjct: 733 ETEIIQAKVGRYEYPEENPFFLENIPHSVFPTHKYPSALHPKALSVNINKQIWDIYFKEL 554
Query: 183 LPLFTVDGDDGSYAQTVALDLACLQVLSQRIHIGKYVAEVKFKDAPQEYSRLIKEKDSNS 362
LPLF GDDG+Y T A DLACLQ LS+RIH GK+VAEVKF+DAPQ+Y I+ +D +
Sbjct: 553 LPLFVKPGDDGNYPSTAASDLACLQALSRRIHYGKFVAEVKFRDAPQDYEPAIRAQDREA 374
Query: 363 LMDMLTFXXXXXXXXXXXXXXXXTFGQNV 449
LM +LTF TFGQ V
Sbjct: 373 LMKLLTFEKVEEMVKKRVQKKAETFGQEV 287
Score = 105 bits (224), Expect = 2e-021
Identities = 61/136 (44%), Positives = 71/136 (52%)
Frame = -3 / +3
Query: 448 TFCPNVXXXXXXXXXXXXXXXLNVSISIRELLSFSFISRLYS*GASLNFTSATYLPI*IL 269
T CPNV NV+ I+ LS + I+ S GASLN TSAT LP *IL
Sbjct: 288 TSCPNVSAFFCTLFLTISSTFSNVNSFIKASLS*ARIAGS*SCGASLNLTSATNLP**IL 467
Query: 268 CDRTCRHAKSSATVCA*LPSSPSTVNNGSNSSKYIFHIASFTVTNEAKGCKTFGEGFVGK 89
+R C+ A+S A V *LPSSP N GSNS K I I +T+ A GCK G VGK
Sbjct: 468 LERACKQARSLAAVDG*LPSSPGLTNKGSNSLK*ISQICLLMLTDRALGCKADGYLCVGK 647
Query: 88 RGEGRS*GKNGTSSGF 41
G K G SSG+
Sbjct: 648 TE*GMFSRKKGFSSGY 695
Score = 57.9 bits (120), Expect(2) = 2e-054
Identities = 23/33 (69%), Positives = 29/33 (87%)
Frame = +3 / -1
Query: 489 KVDPKVLSKLYDQWVMPLTKDVEVEYLLRRLD* 587
KVDP + S++Y +W++PLTK VEVEYLLRRLD*
Sbjct: 244 KVDPLLASRIYGEWLIPLTKLVEVEYLLRRLD* 146
>gb|L47355.1| Arabidopsis thaliana chorismate mutase mRNA, complete cds
Length = 1006
Score = 177 bits (381), Expect(2) = 2e-054
Identities = 74/149 (49%), Positives = 92/149 (61%)
Frame = +3 / +1
Query: 3 EAEALNAKAXHYQKPEDVPFFPQDLPSPLFPTKPSPKVLHPFASLVTVNDAIWKMYFDEL 182
E E + AK Y+ PE+ PFF +++P +FPT P LHP A V +N IW +YF EL
Sbjct: 274 ETEIIQAKVGRYEYPEENPFFLENIPHSVFPTHKYPSALHPKALSVNINKQIWDIYFKEL 453
Query: 183 LPLFTVDGDDGSYAQTVALDLACLQVLSQRIHIGKYVAEVKFKDAPQEYSRLIKEKDSNS 362
LPLF GDDG+Y T A DLACLQ LS+RIH GK+VAEVKF+DAPQ+Y I+ +D +
Sbjct: 454 LPLFVKPGDDGNYPSTAASDLACLQALSRRIHYGKFVAEVKFRDAPQDYEPAIRAQDREA 633
Query: 363 LMDMLTFXXXXXXXXXXXXXXXXTFGQNV 449
LM +LTF TFGQ V
Sbjct: 634 LMKLLTFEKVEEMVKKRVQKKAETFGQEV 720
Score = 105 bits (224), Expect = 2e-021
Identities = 61/136 (44%), Positives = 71/136 (52%)
Frame = -3 / -3
Query: 448 TFCPNVXXXXXXXXXXXXXXXLNVSISIRELLSFSFISRLYS*GASLNFTSATYLPI*IL 269
T CPNV NV+ I+ LS + I+ S GASLN TSAT LP *IL
Sbjct: 719 TSCPNVSAFFCTLFLTISSTFSNVNSFIKASLS*ARIAGS*SCGASLNLTSATNLP**IL 540
Query: 268 CDRTCRHAKSSATVCA*LPSSPSTVNNGSNSSKYIFHIASFTVTNEAKGCKTFGEGFVGK 89
+R C+ A+S A V *LPSSP N GSNS K I I +T+ A GCK G VGK
Sbjct: 539 LERACKQARSLAAVDG*LPSSPGLTNKGSNSLK*ISQICLLMLTDRALGCKADGYLCVGK 360
Query: 88 RGEGRS*GKNGTSSGF 41
G K G SSG+
Sbjct: 359 TE*GMFSRKKGFSSGY 312
Score = 57.9 bits (120), Expect(2) = 2e-054
Identities = 23/33 (69%), Positives = 29/33 (87%)
Frame = +3 / +1
Query: 489 KVDPKVLSKLYDQWVMPLTKDVEVEYLLRRLD* 587
KVDP + S++Y +W++PLTK VEVEYLLRRLD*
Sbjct: 763 KVDPLLASRIYGEWLIPLTKLVEVEYLLRRLD* 861
>gb|AY133840.1| Arabidopsis thaliana clone U18739 putative chorismate mutase CM2
(At5g10870) mRNA, complete cds
Length = 829
Score = 177 bits (381), Expect(2) = 2e-054
Identities = 74/149 (49%), Positives = 92/149 (61%)
Frame = +3 / +1
Query: 3 EAEALNAKAXHYQKPEDVPFFPQDLPSPLFPTKPSPKVLHPFASLVTVNDAIWKMYFDEL 182
E E + AK Y+ PE+ PFF +++P +FPT P LHP A V +N IW +YF EL
Sbjct: 211 ETEIIQAKVGRYEYPEENPFFLENIPHSVFPTHKYPSALHPKALSVNINKQIWDIYFKEL 390
Query: 183 LPLFTVDGDDGSYAQTVALDLACLQVLSQRIHIGKYVAEVKFKDAPQEYSRLIKEKDSNS 362
LPLF GDDG+Y T A DLACLQ LS+RIH GK+VAEVKF+DAPQ+Y I+ +D +
Sbjct: 391 LPLFVKPGDDGNYPSTAASDLACLQALSRRIHYGKFVAEVKFRDAPQDYEPAIRAQDREA 570
Query: 363 LMDMLTFXXXXXXXXXXXXXXXXTFGQNV 449
LM +LTF TFGQ V
Sbjct: 571 LMKLLTFEKVEEMVKKRVQKKAETFGQEV 657
Score = 105 bits (224), Expect = 2e-021
Identities = 61/136 (44%), Positives = 71/136 (52%)
Frame = -3 / -3
Query: 448 TFCPNVXXXXXXXXXXXXXXXLNVSISIRELLSFSFISRLYS*GASLNFTSATYLPI*IL 269
T CPNV NV+ I+ LS + I+ S GASLN TSAT LP *IL
Sbjct: 656 TSCPNVSAFFCTLFLTISSTFSNVNSFIKASLS*ARIAGS*SCGASLNLTSATNLP**IL 477
Query: 268 CDRTCRHAKSSATVCA*LPSSPSTVNNGSNSSKYIFHIASFTVTNEAKGCKTFGEGFVGK 89
+R C+ A+S A V *LPSSP N GSNS K I I +T+ A GCK G VGK
Sbjct: 476 LERACKQARSLAAVDG*LPSSPGLTNKGSNSLK*ISQICLLMLTDRALGCKADGYLCVGK 297
Query: 88 RGEGRS*GKNGTSSGF 41
G K G SSG+
Sbjct: 296 TE*GMFSRKKGFSSGY 249
Score = 57.9 bits (120), Expect(2) = 2e-054
Identities = 23/33 (69%), Positives = 29/33 (87%)
Frame = +3 / +1
Query: 489 KVDPKVLSKLYDQWVMPLTKDVEVEYLLRRLD* 587
KVDP + S++Y +W++PLTK VEVEYLLRRLD*
Sbjct: 700 KVDPLLASRIYGEWLIPLTKLVEVEYLLRRLD* 798
>emb|AX506277.1| Sequence 972 from Patent WO0216655
Length = 798
Score = 177 bits (381), Expect(2) = 2e-054
Identities = 74/149 (49%), Positives = 92/149 (61%)
Frame = +3 / +1
Query: 3 EAEALNAKAXHYQKPEDVPFFPQDLPSPLFPTKPSPKVLHPFASLVTVNDAIWKMYFDEL 182
E E + AK Y+ PE+ PFF +++P +FPT P LHP A V +N IW +YF EL
Sbjct: 211 ETEIIQAKVGRYEYPEENPFFLENIPHSVFPTHKYPSALHPKALSVNINKQIWDIYFKEL 390
Query: 183 LPLFTVDGDDGSYAQTVALDLACLQVLSQRIHIGKYVAEVKFKDAPQEYSRLIKEKDSNS 362
LPLF GDDG+Y T A DLACLQ LS+RIH GK+VAEVKF+DAPQ+Y I+ +D +
Sbjct: 391 LPLFVKPGDDGNYPSTAASDLACLQALSRRIHYGKFVAEVKFRDAPQDYEPAIRAQDREA 570
Query: 363 LMDMLTFXXXXXXXXXXXXXXXXTFGQNV 449
LM +LTF TFGQ V
Sbjct: 571 LMKLLTFEKVEEMVKKRVQKKAETFGQEV 657
Score = 105 bits (224), Expect = 2e-021
Identities = 61/136 (44%), Positives = 71/136 (52%)
Frame = -3 / -2
Query: 448 TFCPNVXXXXXXXXXXXXXXXLNVSISIRELLSFSFISRLYS*GASLNFTSATYLPI*IL 269
T CPNV NV+ I+ LS + I+ S GASLN TSAT LP *IL
Sbjct: 656 TSCPNVSAFFCTLFLTISSTFSNVNSFIKASLS*ARIAGS*SCGASLNLTSATNLP**IL 477
Query: 268 CDRTCRHAKSSATVCA*LPSSPSTVNNGSNSSKYIFHIASFTVTNEAKGCKTFGEGFVGK 89
+R C+ A+S A V *LPSSP N GSNS K I I +T+ A GCK G VGK
Sbjct: 476 LERACKQARSLAAVDG*LPSSPGLTNKGSNSLK*ISQICLLMLTDRALGCKADGYLCVGK 297
Query: 88 RGEGRS*GKNGTSSGF 41
G K G SSG+
Sbjct: 296 TE*GMFSRKKGFSSGY 249
Score = 57.9 bits (120), Expect(2) = 2e-054
Identities = 23/33 (69%), Positives = 29/33 (87%)
Frame = +3 / +1
Query: 489 KVDPKVLSKLYDQWVMPLTKDVEVEYLLRRLD* 587
KVDP + S++Y +W++PLTK VEVEYLLRRLD*
Sbjct: 700 KVDPLLASRIYGEWLIPLTKLVEVEYLLRRLD* 798
>gb|BT005306.1| Arabidopsis thaliana At1g69370 mRNA, complete cds
Length = 951
Score = 214 bits (461), Expect = 4e-054
Identities = 86/195 (44%), Positives = 117/195 (60%)
Frame = +3 / +1
Query: 3 EAEALNAKAXHYQKPEDVPFFPQDLPSPLFPTKPSPKVLHPFASLVTVNDAIWKMYFDEL 182
E E L+AK Y+ P++ PFFPQ LP P+ P P+VLH A + +N +W MYF L
Sbjct: 367 ETEKLHAKVDRYKSPDEHPFFPQCLPEPILPPIQYPQVLHRCAESININKKVWNMYFKHL 546
Query: 183 LPLFTVDGDDGSYAQTVALDLACLQVLSQRIHIGKYVAEVKFKDAPQEYSRLIKEKDSNS 362
LP GDDG+ D CLQ+LS+RIH GK+VAE KF++ P Y IKE+D
Sbjct: 547 LPRLVKPGDDGNCGSAALCDTMCLQILSKRIHFGKFVAEAKFRENPAAYETAIKEQDRTQ 726
Query: 363 LMDMLTFXXXXXXXXXXXXXXXXTFGQNVTLDDNATAGDSECKVDPKVLSKLYDQWVMPL 542
LM +LT+ FGQ++T++D T D K+ P +++KLY + +MPL
Sbjct: 727 LMQLLTYETVEEVVKKRVEIKARIFGQDITINDPETEADPSYKIQPSLVAKLYGERIMPL 906
Query: 543 TKDVEVEYLLRRLD* 587
TK+V++EYLLRRLD*
Sbjct: 907 TKEVQIEYLLRRLD* 951
>dbj|AK117860.1| Arabidopsis thaliana At1g69370 mRNA for putative chorismate mutase,
complete cds, clone: RAFL19-02-D09
Length = 1143
Score = 214 bits (461), Expect = 4e-054
Identities = 86/195 (44%), Positives = 117/195 (60%)
Frame = +3 / +2
Query: 3 EAEALNAKAXHYQKPEDVPFFPQDLPSPLFPTKPSPKVLHPFASLVTVNDAIWKMYFDEL 182
E E L+AK Y+ P++ PFFPQ LP P+ P P+VLH A + +N +W MYF L
Sbjct: 383 ETEKLHAKVDRYKSPDEHPFFPQCLPEPILPPIQYPQVLHRCAESININKKVWNMYFKHL 562
Query: 183 LPLFTVDGDDGSYAQTVALDLACLQVLSQRIHIGKYVAEVKFKDAPQEYSRLIKEKDSNS 362
LP GDDG+ D CLQ+LS+RIH GK+VAE KF++ P Y IKE+D
Sbjct: 563 LPRLVKPGDDGNCGSAALCDTMCLQILSKRIHFGKFVAEAKFRENPAAYETAIKEQDRTQ 742
Query: 363 LMDMLTFXXXXXXXXXXXXXXXXTFGQNVTLDDNATAGDSECKVDPKVLSKLYDQWVMPL 542
LM +LT+ FGQ++T++D T D K+ P +++KLY + +MPL
Sbjct: 743 LMQLLTYETVEEVVKKRVEIKARIFGQDITINDPETEADPSYKIQPSLVAKLYGERIMPL 922
Query: 543 TKDVEVEYLLRRLD* 587
TK+V++EYLLRRLD*
Sbjct: 923 TKEVQIEYLLRRLD* 967
>ref|NM_105604.2| Arabidopsis thaliana CM3 (CHORISMATE MUTASE 3); chorismate mutase
AT1G69370 (CM3) mRNA, complete cds
Length = 1261
Score = 214 bits (461), Expect = 4e-054
Identities = 86/195 (44%), Positives = 117/195 (60%)
Frame = +3 / +2
Query: 3 EAEALNAKAXHYQKPEDVPFFPQDLPSPLFPTKPSPKVLHPFASLVTVNDAIWKMYFDEL 182
E E L+AK Y+ P++ PFFPQ LP P+ P P+VLH A + +N +W MYF L
Sbjct: 509 ETEKLHAKVDRYKSPDEHPFFPQCLPEPILPPIQYPQVLHRCAESININKKVWNMYFKHL 688
Query: 183 LPLFTVDGDDGSYAQTVALDLACLQVLSQRIHIGKYVAEVKFKDAPQEYSRLIKEKDSNS 362
LP GDDG+ D CLQ+LS+RIH GK+VAE KF++ P Y IKE+D
Sbjct: 689 LPRLVKPGDDGNCGSAALCDTMCLQILSKRIHFGKFVAEAKFRENPAAYETAIKEQDRTQ 868
Query: 363 LMDMLTFXXXXXXXXXXXXXXXXTFGQNVTLDDNATAGDSECKVDPKVLSKLYDQWVMPL 542
LM +LT+ FGQ++T++D T D K+ P +++KLY + +MPL
Sbjct: 869 LMQLLTYETVEEVVKKRVEIKARIFGQDITINDPETEADPSYKIQPSLVAKLYGERIMPL 1048
Query: 543 TKDVEVEYLLRRLD* 587
TK+V++EYLLRRLD*
Sbjct: 1049 TKEVQIEYLLRRLD* 1093
>gb|AF131219.1|AF131219 Arabidopsis thaliana chorismate mutase 3 (CM3) mRNA, complete cds
Length = 1217
Score = 210 bits (452), Expect = 7e-053
Identities = 84/195 (43%), Positives = 117/195 (60%)
Frame = +3 / +2
Query: 3 EAEALNAKAXHYQKPEDVPFFPQDLPSPLFPTKPSPKVLHPFASLVTVNDAIWKMYFDEL 182
E E L+AK Y+ P++ PFFPQ LP P+ P P+VLH A + +N +W MYF L
Sbjct: 509 ETEKLHAKVDRYKSPDEHPFFPQCLPEPILPPIQYPQVLHRCAESININKKVWNMYFKHL 688
Query: 183 LPLFTVDGDDGSYAQTVALDLACLQVLSQRIHIGKYVAEVKFKDAPQEYSRLIKEKDSNS 362
LP GDDG+ D CLQ+LS+RIH+ K+VA+ KF++ P Y IKE+D
Sbjct: 689 LPRLVKPGDDGNCGSAALCDTMCLQILSKRIHLRKFVADAKFRENPAAYETAIKEQDRTQ 868
Query: 363 LMDMLTFXXXXXXXXXXXXXXXXTFGQNVTLDDNATAGDSECKVDPKVLSKLYDQWVMPL 542
LM +LT+ FGQ++T++D T D K+ P +++KLY + +MPL
Sbjct: 869 LMQLLTYETVEEVVKKRVEIKARIFGQDITINDPETEADPSYKIQPSLVAKLYGERIMPL 1048
Query: 543 TKDVEVEYLLRRLD* 587
TK+V++EYLLRRLD*
Sbjct: 1049 TKEVQIEYLLRRLD* 1093
>emb|AX464576.1| Sequence 4 from Patent WO0202798
Length = 1217
Score = 210 bits (452), Expect = 7e-053
Identities = 84/195 (43%), Positives = 117/195 (60%)
Frame = +3 / +2
Query: 3 EAEALNAKAXHYQKPEDVPFFPQDLPSPLFPTKPSPKVLHPFASLVTVNDAIWKMYFDEL 182
E E L+AK Y+ P++ PFFPQ LP P+ P P+VLH A + +N +W MYF L
Sbjct: 509 ETEKLHAKVDRYKSPDEHPFFPQCLPEPILPPIQYPQVLHRCAESININKKVWNMYFKHL 688
Query: 183 LPLFTVDGDDGSYAQTVALDLACLQVLSQRIHIGKYVAEVKFKDAPQEYSRLIKEKDSNS 362
LP GDDG+ D CLQ+LS+RIH+ K+VA+ KF++ P Y IKE+D
Sbjct: 689 LPRLVKPGDDGNCGSAALCDTMCLQILSKRIHLRKFVADAKFRENPAAYETAIKEQDRTQ 868
Query: 363 LMDMLTFXXXXXXXXXXXXXXXXTFGQNVTLDDNATAGDSECKVDPKVLSKLYDQWVMPL 542
LM +LT+ FGQ++T++D T D K+ P +++KLY + +MPL
Sbjct: 869 LMQLLTYETVEEVVKKRVEIKARIFGQDITINDPETEADPSYKIQPSLVAKLYGERIMPL 1048
Query: 543 TKDVEVEYLLRRLD* 587
TK+V++EYLLRRLD*
Sbjct: 1049 TKEVQIEYLLRRLD* 1093
>emb|AX464582.1| Sequence 10 from Patent WO0202798
Length = 1217
Score = 210 bits (452), Expect = 7e-053
Identities = 84/195 (43%), Positives = 117/195 (60%)
Frame = +3 / -2
Query: 3 EAEALNAKAXHYQKPEDVPFFPQDLPSPLFPTKPSPKVLHPFASLVTVNDAIWKMYFDEL 182
E E L+AK Y+ P++ PFFPQ LP P+ P P+VLH A + +N +W MYF L
Sbjct: 709 ETEKLHAKVDRYKSPDEHPFFPQCLPEPILPPIQYPQVLHRCAESININKKVWNMYFKHL 530
Query: 183 LPLFTVDGDDGSYAQTVALDLACLQVLSQRIHIGKYVAEVKFKDAPQEYSRLIKEKDSNS 362
LP GDDG+ D CLQ+LS+RIH+ K+VA+ KF++ P Y IKE+D
Sbjct: 529 LPRLVKPGDDGNCGSAALCDTMCLQILSKRIHLRKFVADAKFRENPAAYETAIKEQDRTQ 350
Query: 363 LMDMLTFXXXXXXXXXXXXXXXXTFGQNVTLDDNATAGDSECKVDPKVLSKLYDQWVMPL 542
LM +LT+ FGQ++T++D T D K+ P +++KLY + +MPL
Sbjct: 349 LMQLLTYETVEEVVKKRVEIKARIFGQDITINDPETEADPSYKIQPSLVAKLYGERIMPL 170
Query: 543 TKDVEVEYLLRRLD* 587
TK+V++EYLLRRLD*
Sbjct: 169 TKEVQIEYLLRRLD* 125
>ref|NM_113844.3| Arabidopsis thaliana CM1; chorismate mutase AT3G29200 (CM1) mRNA,
complete cds
Length = 1370
Score = 163 bits (350), Expect(2) = 1e-049
Identities = 66/147 (44%), Positives = 86/147 (58%)
Frame = +3 / +3
Query: 9 EALNAKAXHYQKPEDVPFFPQDLPSPLFPTKPSPKVLHPFASLVTVNDAIWKMYFDELLP 188
E L+AK ++ P++ PFFP DLP P+ P PKVLH A + +N IW MYF +L+P
Sbjct: 582 EKLHAKVGRFKSPDEHPFFPDDLPEPMLPPLQYPKVLHFAADSININKKIWNMYFRDLVP 761
Query: 189 LFTVDGDDGSYAQTVALDLACLQVLSQRIHIGKYVAEVKFKDAPQEYSRLIKEKDSNSLM 368
GDDG+Y T D CLQ LS+RIH GK+VAE KF+ +P+ Y IK +D ++LM
Sbjct: 762 RLVKKGDDGNYGSTAVCDAICLQCLSKRIHYGKFVAEAKFQASPEAYESAIKAQDKDALM 941
Query: 369 DMLTFXXXXXXXXXXXXXXXXTFGQNV 449
DMLTF T+GQ V
Sbjct: 942 DMLTFPTVEDAIKKRVEMKTRTYGQEV 1022
Score = 56.1 bits (116), Expect(2) = 1e-049
Identities = 21/33 (63%), Positives = 27/33 (81%)
Frame = +3 / +3
Query: 489 KVDPKVLSKLYDQWVMPLTKDVEVEYLLRRLD* 587
K+ P ++ LY W+MPLTK+V+VEYLLRRLD*
Sbjct: 1083 KISPILVGDLYGDWIMPLTKEVQVEYLLRRLD* 1181
>emb|AX506042.1| Sequence 737 from Patent WO0216655
Length = 1005
Score = 163 bits (350), Expect(2) = 1e-049
Identities = 66/147 (44%), Positives = 86/147 (58%)
Frame = +3 / +1
Query: 9 EALNAKAXHYQKPEDVPFFPQDLPSPLFPTKPSPKVLHPFASLVTVNDAIWKMYFDELLP 188
E L+AK ++ P++ PFFP DLP P+ P PKVLH A + +N IW MYF +L+P
Sbjct: 406 EKLHAKVGRFKSPDEHPFFPDDLPEPMLPPLQYPKVLHFAADSININKKIWNMYFRDLVP 585
Query: 189 LFTVDGDDGSYAQTVALDLACLQVLSQRIHIGKYVAEVKFKDAPQEYSRLIKEKDSNSLM 368
GDDG+Y T D CLQ LS+RIH GK+VAE KF+ +P+ Y IK +D ++LM
Sbjct: 586 RLVKKGDDGNYGSTAVCDAICLQCLSKRIHYGKFVAEAKFQASPEAYESAIKAQDKDALM 765
Query: 369 DMLTFXXXXXXXXXXXXXXXXTFGQNV 449
DMLTF T+GQ V
Sbjct: 766 DMLTFPTVEDAIKKRVEMKTRTYGQEV 846
Score = 56.1 bits (116), Expect(2) = 1e-049
Identities = 21/33 (63%), Positives = 27/33 (81%)
Frame = +3 / +1
Query: 489 KVDPKVLSKLYDQWVMPLTKDVEVEYLLRRLD* 587
K+ P ++ LY W+MPLTK+V+VEYLLRRLD*
Sbjct: 907 KISPILVGDLYGDWIMPLTKEVQVEYLLRRLD* 1005
>emb|AX464574.1| Sequence 2 from Patent WO0202798
Length = 1207
Score = 162 bits (348), Expect(2) = 3e-049
Identities = 66/147 (44%), Positives = 85/147 (57%)
Frame = +3 / +1
Query: 9 EALNAKAXHYQKPEDVPFFPQDLPSPLFPTKPSPKVLHPFASLVTVNDAIWKMYFDELLP 188
E L+AK ++ P++ PFFP DLP P+ P PKVLH A + +N IW MYF +L+P
Sbjct: 418 EKLHAKVGRFKSPDEHPFFPDDLPEPMLPPLQYPKVLHFAADSININKKIWNMYFRDLVP 597
Query: 189 LFTVDGDDGSYAQTVALDLACLQVLSQRIHIGKYVAEVKFKDAPQEYSRLIKEKDSNSLM 368
GDDG+Y T D CLQ LS+RIH GK+VAE KF+ +P+ Y IK +D + LM
Sbjct: 598 RLVKKGDDGNYGSTAVCDAICLQCLSKRIHYGKFVAEAKFQASPEAYESAIKAQDKDRLM 777
Query: 369 DMLTFXXXXXXXXXXXXXXXXTFGQNV 449
DMLTF T+GQ V
Sbjct: 778 DMLTFPTVEDAIKKRVEMKTRTYGQEV 858
Score = 56.1 bits (116), Expect(2) = 3e-049
Identities = 21/33 (63%), Positives = 27/33 (81%)
Frame = +3 / +1
Query: 489 KVDPKVLSKLYDQWVMPLTKDVEVEYLLRRLD* 587
K+ P ++ LY W+MPLTK+V+VEYLLRRLD*
Sbjct: 919 KISPILVGDLYGDWIMPLTKEVQVEYLLRRLD* 1017
>emb|AX464580.1| Sequence 8 from Patent WO0202798
Length = 1207
Score = 162 bits (348), Expect(2) = 3e-049
Identities = 66/147 (44%), Positives = 85/147 (57%)
Frame = +3 / -1
Query: 9 EALNAKAXHYQKPEDVPFFPQDLPSPLFPTKPSPKVLHPFASLVTVNDAIWKMYFDELLP 188
E L+AK ++ P++ PFFP DLP P+ P PKVLH A + +N IW MYF +L+P
Sbjct: 790 EKLHAKVGRFKSPDEHPFFPDDLPEPMLPPLQYPKVLHFAADSININKKIWNMYFRDLVP 611
Query: 189 LFTVDGDDGSYAQTVALDLACLQVLSQRIHIGKYVAEVKFKDAPQEYSRLIKEKDSNSLM 368
GDDG+Y T D CLQ LS+RIH GK+VAE KF+ +P+ Y IK +D + LM
Sbjct: 610 RLVKKGDDGNYGSTAVCDAICLQCLSKRIHYGKFVAEAKFQASPEAYESAIKAQDKDRLM 431
Query: 369 DMLTFXXXXXXXXXXXXXXXXTFGQNV 449
DMLTF T+GQ V
Sbjct: 430 DMLTFPTVEDAIKKRVEMKTRTYGQEV 350
Score = 56.1 bits (116), Expect(2) = 3e-049
Identities = 21/33 (63%), Positives = 27/33 (81%)
Frame = +3 / -1
Query: 489 KVDPKVLSKLYDQWVMPLTKDVEVEYLLRRLD* 587
K+ P ++ LY W+MPLTK+V+VEYLLRRLD*
Sbjct: 289 KISPILVGDLYGDWIMPLTKEVQVEYLLRRLD* 191
>emb|Z26519.1|ATCHMUT A.thaliana mRNA for chorismate mutase
Length = 1207
Score = 162 bits (348), Expect(2) = 3e-049
Identities = 66/147 (44%), Positives = 85/147 (57%)
Frame = +3 / +1
Query: 9 EALNAKAXHYQKPEDVPFFPQDLPSPLFPTKPSPKVLHPFASLVTVNDAIWKMYFDELLP 188
E L+AK ++ P++ PFFP DLP P+ P PKVLH A + +N IW MYF +L+P
Sbjct: 418 EKLHAKVGRFKSPDEHPFFPDDLPEPMLPPLQYPKVLHFAADSININKKIWNMYFRDLVP 597
Query: 189 LFTVDGDDGSYAQTVALDLACLQVLSQRIHIGKYVAEVKFKDAPQEYSRLIKEKDSNSLM 368
GDDG+Y T D CLQ LS+RIH GK+VAE KF+ +P+ Y IK +D + LM
Sbjct: 598 RLVKKGDDGNYGSTAVCDAICLQCLSKRIHYGKFVAEAKFQASPEAYESAIKAQDKDRLM 777
Query: 369 DMLTFXXXXXXXXXXXXXXXXTFGQNV 449
DMLTF T+GQ V
Sbjct: 778 DMLTFPTVEDAIKKRVEMKTRTYGQEV 858
Score = 56.1 bits (116), Expect(2) = 3e-049
Identities = 21/33 (63%), Positives = 27/33 (81%)
Frame = +3 / +1
Query: 489 KVDPKVLSKLYDQWVMPLTKDVEVEYLLRRLD* 587
K+ P ++ LY W+MPLTK+V+VEYLLRRLD*
Sbjct: 919 KISPILVGDLYGDWIMPLTKEVQVEYLLRRLD* 1017
>emb|BX822129.1|CNS0A727 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB15ZB12 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1329
Score = 161 bits (347), Expect(2) = 4e-049
Identities = 65/147 (44%), Positives = 86/147 (58%)
Frame = +3 / +3
Query: 9 EALNAKAXHYQKPEDVPFFPQDLPSPLFPTKPSPKVLHPFASLVTVNDAIWKMYFDELLP 188
E L+AK ++ P++ PFFP DLP P+ P PKVLH A + +N IW MYF +L+P
Sbjct: 582 EKLHAKVGRFKSPDEHPFFPDDLPEPMLPPLQYPKVLHFAADSININKKIWNMYFRDLVP 761
Query: 189 LFTVDGDDGSYAQTVALDLACLQVLSQRIHIGKYVAEVKFKDAPQEYSRLIKEKDSNSLM 368
GDDG+Y T D CL+ LS+RIH GK+VAE KF+ +P+ Y IK +D ++LM
Sbjct: 762 RLVKKGDDGNYGSTAVCDAICLECLSKRIHYGKFVAEAKFQASPEAYESAIKAQDKDALM 941
Query: 369 DMLTFXXXXXXXXXXXXXXXXTFGQNV 449
DMLTF T+GQ V
Sbjct: 942 DMLTFPTVEDAIKKRVEMKTRTYGQEV 1022
Score = 56.1 bits (116), Expect(2) = 4e-049
Identities = 21/33 (63%), Positives = 27/33 (81%)
Frame = +3 / +3
Query: 489 KVDPKVLSKLYDQWVMPLTKDVEVEYLLRRLD* 587
K+ P ++ LY W+MPLTK+V+VEYLLRRLD*
Sbjct: 1083 KISPILVGDLYGDWIMPLTKEVQVEYLLRRLD* 1181
>emb|BX824460.1|CNS0A6WL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH4ZG08 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1265
Score = 160 bits (344), Expect(2) = 9e-049
Identities = 65/147 (44%), Positives = 85/147 (57%)
Frame = +3 / +1
Query: 9 EALNAKAXHYQKPEDVPFFPQDLPSPLFPTKPSPKVLHPFASLVTVNDAIWKMYFDELLP 188
E L+AK ++ P++ PFFP DLP P+ P PKVLH A + +N IW MYF +L+P
Sbjct: 475 EKLHAKVGRFKSPDEHPFFPDDLPEPMLPPLQYPKVLHFAADSININKKIWNMYFRDLVP 654
Query: 189 LFTVDGDDGSYAQTVALDLACLQVLSQRIHIGKYVAEVKFKDAPQEYSRLIKEKDSNSLM 368
GDDG+Y T D CLQ LS+RIH GK+VAE KF+ +P+ Y IK +D ++LM
Sbjct: 655 RLVKKGDDGNYGSTAVCDAICLQCLSKRIHYGKFVAEAKFQASPEAYESAIKAQDKDALM 834
Query: 369 DMLTFXXXXXXXXXXXXXXXXTFGQNV 449
DML F T+GQ V
Sbjct: 835 DMLKFPTVEDAIKKRVEMKTRTYGQEV 915
Score = 56.1 bits (116), Expect(2) = 9e-049
Identities = 21/33 (63%), Positives = 27/33 (81%)
Frame = +3 / +1
Query: 489 KVDPKVLSKLYDQWVMPLTKDVEVEYLLRRLD* 587
K+ P ++ LY W+MPLTK+V+VEYLLRRLD*
Sbjct: 976 KISPILVGDLYGDWIMPLTKEVQVEYLLRRLD* 1074
>gb|AY089156.1| Arabidopsis thaliana clone 39613 mRNA, complete sequence
Length = 1274
Score = 163 bits (350), Expect(2) = 8e-048
Identities = 66/147 (44%), Positives = 86/147 (58%)
Frame = +3 / +3
Query: 9 EALNAKAXHYQKPEDVPFFPQDLPSPLFPTKPSPKVLHPFASLVTVNDAIWKMYFDELLP 188
E L+AK ++ P++ PFFP DLP P+ P PKVLH A + +N IW MYF +L+P
Sbjct: 492 EKLHAKVGRFKSPDEHPFFPDDLPEPMLPPLQYPKVLHFAADSININKKIWNMYFRDLVP 671
Query: 189 LFTVDGDDGSYAQTVALDLACLQVLSQRIHIGKYVAEVKFKDAPQEYSRLIKEKDSNSLM 368
GDDG+Y T D CLQ LS+RIH GK+VAE KF+ +P+ Y IK +D ++LM
Sbjct: 672 RLVKKGDDGNYGSTAVCDAICLQCLSKRIHYGKFVAEAKFQASPEAYESAIKAQDKDALM 851
Query: 369 DMLTFXXXXXXXXXXXXXXXXTFGQNV 449
DMLTF T+GQ V
Sbjct: 852 DMLTFPTVEDAIKKRVEMKTRTYGQEV 932
Score = 50.1 bits (103), Expect(2) = 8e-048
Identities = 19/24 (79%), Positives = 22/24 (91%)
Frame = +3 / +2
Query: 516 LYDQWVMPLTKDVEVEYLLRRLD* 587
LY W+MPLTK+V+VEYLLRRLD*
Sbjct: 1019 LYGDWIMPLTKEVQVEYLLRRLD* 1090
>emb|AL365234.1|ATT30N20 Arabidopsis thaliana DNA chromosome 5, BAC clone T30N20 (ESSA project)
Length = 98473
Score = 73.9 bits (155), Expect(5) = 5e-040
Identities = 30/48 (62%), Positives = 33/48 (68%)
Frame = +3 / -2
Query: 117 LHPFASLVTVNDAIWKMYFDELLPLFTVDGDDGSYAQTVALDLACLQV 260
LHP A V +N IW +YF ELLPLF GDDG+Y T A DLACLQV
Sbjct: 38967 LHPKALSVNINKQIWDIYFKELLPLFVKPGDDGNYPSTAASDLACLQV 38824
Score = 57.9 bits (120), Expect(5) = 5e-040
Identities = 23/33 (69%), Positives = 29/33 (87%)
Frame = +3 / -3
Query: 489 KVDPKVLSKLYDQWVMPLTKDVEVEYLLRRLD* 587
KVDP + S++Y +W++PLTK VEVEYLLRRLD*
Sbjct: 38417 KVDPLLASRIYGEWLIPLTKLVEVEYLLRRLD* 38319
Score = 51.0 bits (105), Expect(5) = 5e-040
Identities = 20/34 (58%), Positives = 26/34 (76%)
Frame = +3 / -1
Query: 243 LACLQVLSQRIHIGKYVAEVKFKDAPQEYSRLIK 344
L + LS+RIH GK+VAEVKF+DAPQ+Y I+
Sbjct: 38755 LILCKALSRRIHYGKFVAEVKFRDAPQDYEPAIR 38654
Score = 35.0 bits (70), Expect(5) = 5e-040
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3 / -3
Query: 36 YQKPEDVPFFPQDLPSPLFPTKPSPKV 116
Y+ PE+ PFF +++P +FPT P V
Sbjct: 39131 YEYPEENPFFLENIPHSVFPTHKYPSV 39051
Score = 22.1 bits (42), Expect(5) = 5e-040
Identities = 11/33 (33%), Positives = 13/33 (39%)
Frame = +3 / -3
Query: 351 DSNSLMDMLTFXXXXXXXXXXXXXXXXTFGQNV 449
D +LM +LTF TFGQ V
Sbjct: 38558 DREALMKLLTFEKVEEMVKKRVQKKAETFGQEV 38460
>emb|AJ242648.1|ATH242648 Arabidopsis thaliana CM2 gene for cytosolic chorismate mutase, exons
1-6
Length = 5177
Score = 73.9 bits (155), Expect(5) = 6e-040
Identities = 30/48 (62%), Positives = 33/48 (68%)
Frame = +3 / +1
Query: 117 LHPFASLVTVNDAIWKMYFDELLPLFTVDGDDGSYAQTVALDLACLQV 260
LHP A V +N IW +YF ELLPLF GDDG+Y T A DLACLQV
Sbjct: 3472 LHPKALSVNINKQIWDIYFKELLPLFVKPGDDGNYPSTAASDLACLQV 3615
Score = 57.9 bits (120), Expect(5) = 6e-040
Identities = 23/33 (69%), Positives = 29/33 (87%)
Frame = +3 / +2
Query: 489 KVDPKVLSKLYDQWVMPLTKDVEVEYLLRRLD* 587
KVDP + S++Y +W++PLTK VEVEYLLRRLD*
Sbjct: 4022 KVDPLLASRIYGEWLIPLTKLVEVEYLLRRLD* 4120
Score = 51.0 bits (105), Expect(5) = 6e-040
Identities = 20/34 (58%), Positives = 26/34 (76%)
Frame = +3 / +3
Query: 243 LACLQVLSQRIHIGKYVAEVKFKDAPQEYSRLIK 344
L + LS+RIH GK+VAEVKF+DAPQ+Y I+
Sbjct: 3684 LILCKALSRRIHYGKFVAEVKFRDAPQDYEPAIR 3785
Score = 35.0 bits (70), Expect(5) = 6e-040
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3 / +2
Query: 36 YQKPEDVPFFPQDLPSPLFPTKPSPKV 116
Y+ PE+ PFF +++P +FPT P V
Sbjct: 3308 YEYPEENPFFLENIPHSVFPTHKYPSV 3388
Score = 22.1 bits (42), Expect(5) = 6e-040
Identities = 11/33 (33%), Positives = 13/33 (39%)
Frame = +3 / +2
Query: 351 DSNSLMDMLTFXXXXXXXXXXXXXXXXTFGQNV 449
D +LM +LTF TFGQ V
Sbjct: 3881 DREALMKLLTFEKVEEMVKKRVQKKAETFGQEV 3979
>emb|AX464578.1| Sequence 6 from Patent WO0202798
Length = 5176
Score = 73.9 bits (155), Expect(5) = 6e-040
Identities = 30/48 (62%), Positives = 33/48 (68%)
Frame = +3 / +3
Query: 117 LHPFASLVTVNDAIWKMYFDELLPLFTVDGDDGSYAQTVALDLACLQV 260
LHP A V +N IW +YF ELLPLF GDDG+Y T A DLACLQV
Sbjct: 3471 LHPKALSVNINKQIWDIYFKELLPLFVKPGDDGNYPSTAASDLACLQV 3614
Score = 57.9 bits (120), Expect(5) = 6e-040
Identities = 23/33 (69%), Positives = 29/33 (87%)
Frame = +3 / +1
Query: 489 KVDPKVLSKLYDQWVMPLTKDVEVEYLLRRLD* 587
KVDP + S++Y +W++PLTK VEVEYLLRRLD*
Sbjct: 4021 KVDPLLASRIYGEWLIPLTKLVEVEYLLRRLD* 4119
Score = 51.0 bits (105), Expect(5) = 6e-040
Identities = 20/34 (58%), Positives = 26/34 (76%)
Frame = +3 / +2
Query: 243 LACLQVLSQRIHIGKYVAEVKFKDAPQEYSRLIK 344
L + LS+RIH GK+VAEVKF+DAPQ+Y I+
Sbjct: 3683 LILCKALSRRIHYGKFVAEVKFRDAPQDYEPAIR 3784
Score = 35.0 bits (70), Expect(5) = 6e-040
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3 / +1
Query: 36 YQKPEDVPFFPQDLPSPLFPTKPSPKV 116
Y+ PE+ PFF +++P +FPT P V
Sbjct: 3307 YEYPEENPFFLENIPHSVFPTHKYPSV 3387
Score = 22.1 bits (42), Expect(5) = 6e-040
Identities = 11/33 (33%), Positives = 13/33 (39%)
Frame = +3 / +1
Query: 351 DSNSLMDMLTFXXXXXXXXXXXXXXXXTFGQNV 449
D +LM +LTF TFGQ V
Sbjct: 3880 DREALMKLLTFEKVEEMVKKRVQKKAETFGQEV 3978
>gb|BX840398.1|BX840398 BX840398 Arabidopsis thaliana Hormone Treated Callus Col-0
Arabidopsis thaliana cDNA clone GSLTPGH61ZC01 5PRIM,
mRNA sequence
Length = 977
Score = 159 bits (341), Expect = 1e-037
Identities = 65/147 (44%), Positives = 85/147 (57%)
Frame = +3 / +1
Query: 9 EALNAKAXHYQKPEDVPFFPQDLPSPLFPTKPSPKVLHPFASLVTVNDAIWKMYFDELLP 188
E L+AK ++ P++ PFFP DLP P+ P PKVLH A + +N IW MYF +L+P
Sbjct: 475 EKLHAKVGRFKSPDEHPFFPDDLPEPMLPPLQYPKVLHFAADSININKKIWNMYFRDLVP 654
Query: 189 LFTVDGDDGSYAQTVALDLACLQVLSQRIHIGKYVAEVKFKDAPQEYSRLIKEKDSNSLM 368
GDDG+Y T CLQ LS+RIH GK+VAE KF+ +P+ Y IK +D ++LM
Sbjct: 655 RLVKKGDDGNYGSTAVCYAICLQCLSKRIHYGKFVAEAKFQASPEAYESAIKAQDKDALM 834
Query: 369 DMLTFXXXXXXXXXXXXXXXXTFGQNV 449
DMLTF T+GQ V
Sbjct: 835 DMLTFPTVEDAIKKRVEMKTRTYGQEV 915
>gb|BX839097.1|BX839097 BX839097 Arabidopsis thaliana Adult vegetative tissue Col-0
Arabidopsis thaliana cDNA clone GSLTLS95ZC11 5PRIM, mRNA
sequence
Length = 1025
Score = 155 bits (332), Expect = 2e-036
Identities = 61/125 (48%), Positives = 80/125 (64%)
Frame = +3 / +3
Query: 9 EALNAKAXHYQKPEDVPFFPQDLPSPLFPTKPSPKVLHPFASLVTVNDAIWKMYFDELLP 188
E L+AK ++ P++ PFFP DLP P+ P KVLH A + +N IW MYF +L+P
Sbjct: 531 EKLHAKVGRFKSPDEHPFFPDDLPEPMLPPLQYRKVLHFAADSININKKIWNMYFRDLVP 710
Query: 189 LFTVDGDDGSYAQTVALDLACLQVLSQRIHIGKYVAEVKFKDAPQEYSRLIKEKDSNSLM 368
GDDG+Y T D CLQ LS+RIH GK+VAE KF+ +P+ Y IK +D ++LM
Sbjct: 711 RLVKKGDDGNYGSTAVCDAICLQCLSKRIHYGKFVAEAKFQASPEAYESAIKAQDKDALM 890
Query: 369 DMLTF 383
DMLTF
Sbjct: 891 DMLTF 905
>gb|AV541889.1|AV541889 AV541889 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ172h08F 3', mRNA sequence
Length = 591
Score = 149 bits (320), Expect = 1e-034
Identities = 62/141 (43%), Positives = 84/141 (59%)
Frame = +3 / -1
Query: 165 MYFDELLPLFTVDGDDGSYAQTVALDLACLQVLSQRIHIGKYVAEVKFKDAPQEYSRLIK 344
MYF LL GDDG+ D CLQ+LS+RIH GK+VAE KF++ P Y IK
Sbjct: 588 MYFKHLLXRLVKPGDDGNCGSAALCDTMCLQILSKRIHFGKFVAEAKFRENPAAYETAIK 409
Query: 345 EKDSNSLMDMLTFXXXXXXXXXXXXXXXXTFGQNVTLDDNATAGDSECKVDPKVLSKLYD 524
E+D LM +LT+ FGQ++T++D T D K+ P +++KLY
Sbjct: 408 EQDRTQLMQLLTYETVEEVVKKRVEIKARIFGQDITINDPETEADPSYKIQPSLVAKLYG 229
Query: 525 QWVMPLTKDVEVEYLLRRLD* 587
+ +MPLTK+V++EYLLRRLD*
Sbjct: 228 ERIMPLTKEVQIEYLLRRLD* 166
>emb|AX464577.1| Sequence 5 from Patent WO0202798
Length = 5099
Score = 61.1 bits (127), Expect(5) = 3e-033
Identities = 24/51 (47%), Positives = 29/51 (56%)
Frame = +3 / +2
Query: 114 VLHPFASLVTVNDAIWKMYFDELLPLFTVDGDDGSYAQTVALDLACLQVLS 266
VLH A + +N IW MYF +L+P GDDG+Y T D CLQV S
Sbjct: 3941 VLHFAADSININKKIWNMYFRDLVPRLVKKGDDGNYXSTAVCDAICLQVCS 4093
Score = 56.1 bits (116), Expect(5) = 3e-033
Identities = 21/33 (63%), Positives = 27/33 (81%)
Frame = +3 / +3
Query: 489 KVDPKVLSKLYDQWVMPLTKDVEVEYLLRRLD* 587
K+ P ++ LY W+MPLTK+V+VEYLLRRLD*
Sbjct: 4551 KISPILVGDLYGDWIMPLTKEVQVEYLLRRLD* 4649
Score = 45.5 bits (93), Expect(5) = 3e-033
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +3 / +2
Query: 252 LQVLSQRIHIGKYVAEVKFKDAPQEYSRLIK 344
LQ LS+RIH GK+VAE KF+ +P+ Y IK
Sbjct: 4199 LQCLSKRIHYGKFVAEAKFQASPEAYESAIK 4291
Score = 42.3 bits (86), Expect(5) = 3e-033
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +3 / +1
Query: 36 YQKPEDVPFFPQDLPSPLFPTKPSPKVLH 122
++ P++ PFFP DLP P+ P PKVL+
Sbjct: 3691 FKSPDEHPFFPDDLPEPMLPPLQYPKVLN 3777
Score = 27.2 bits (53), Expect(5) = 3e-033
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +3 / +3
Query: 348 KDSNSLMDMLTFXXXXXXXXXXXXXXXXTFGQNV 449
+D ++LMDMLTF T+GQ V
Sbjct: 4389 QDKDALMDMLTFPTVEDAIKKRVEMKTRTYGQEV 4490
>emb|AJ242647.1|ATH242647 Arabidopsis thaliana CM1 gene for plastidic chorismate mutase, exons
1-6
Length = 5099
Score = 61.1 bits (127), Expect(5) = 3e-033
Identities = 24/51 (47%), Positives = 29/51 (56%)
Frame = +3 / +2
Query: 114 VLHPFASLVTVNDAIWKMYFDELLPLFTVDGDDGSYAQTVALDLACLQVLS 266
VLH A + +N IW MYF +L+P GDDG+Y T D CLQV S
Sbjct: 3941 VLHFAADSININKKIWNMYFRDLVPRLVKKGDDGNYXSTAVCDAICLQVCS 4093
Score = 56.1 bits (116), Expect(5) = 3e-033
Identities = 21/33 (63%), Positives = 27/33 (81%)
Frame = +3 / +3
Query: 489 KVDPKVLSKLYDQWVMPLTKDVEVEYLLRRLD* 587
K+ P ++ LY W+MPLTK+V+VEYLLRRLD*
Sbjct: 4551 KISPILVGDLYGDWIMPLTKEVQVEYLLRRLD* 4649
Score = 45.5 bits (93), Expect(5) = 3e-033
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +3 / +2
Query: 252 LQVLSQRIHIGKYVAEVKFKDAPQEYSRLIK 344
LQ LS+RIH GK+VAE KF+ +P+ Y IK
Sbjct: 4199 LQCLSKRIHYGKFVAEAKFQASPEAYESAIK 4291
Score = 42.3 bits (86), Expect(5) = 3e-033
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +3 / +1
Query: 36 YQKPEDVPFFPQDLPSPLFPTKPSPKVLH 122
++ P++ PFFP DLP P+ P PKVL+
Sbjct: 3691 FKSPDEHPFFPDDLPEPMLPPLQYPKVLN 3777
Score = 27.2 bits (53), Expect(5) = 3e-033
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +3 / +3
Query: 348 KDSNSLMDMLTFXXXXXXXXXXXXXXXXTFGQNV 449
+D ++LMDMLTF T+GQ V
Sbjct: 4389 QDKDALMDMLTFPTVEDAIKKRVEMKTRTYGQEV 4490
>dbj|AB026657.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MXO21
Length = 77401
Score = 61.1 bits (127), Expect(4) = 2e-030
Identities = 24/51 (47%), Positives = 29/51 (56%)
Frame = +3 / -3
Query: 114 VLHPFASLVTVNDAIWKMYFDELLPLFTVDGDDGSYAQTVALDLACLQVLS 266
VLH A + +N IW MYF +L+P GDDG+Y T D CLQV S
Sbjct: 10937 VLHFAADSININKKIWNMYFRDLVPRLVKKGDDGNYGSTAVCDAICLQVCS 10785
Score = 56.1 bits (116), Expect(4) = 2e-030
Identities = 21/33 (63%), Positives = 27/33 (81%)
Frame = +3 / -1
Query: 489 KVDPKVLSKLYDQWVMPLTKDVEVEYLLRRLD* 587
K+ P ++ LY W+MPLTK+V+VEYLLRRLD*
Sbjct: 10327 KISPILVGDLYGDWIMPLTKEVQVEYLLRRLD* 10229
Score = 45.5 bits (93), Expect(4) = 2e-030
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +3 / -3
Query: 252 LQVLSQRIHIGKYVAEVKFKDAPQEYSRLIK 344
LQ LS+RIH GK+VAE KF+ +P+ Y IK
Sbjct: 10679 LQCLSKRIHYGKFVAEAKFQASPEAYESAIK 10587
Score = 27.2 bits (53), Expect(4) = 2e-030
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +3 / -1
Query: 348 KDSNSLMDMLTFXXXXXXXXXXXXXXXXTFGQNV 449
+D ++LMDMLTF T+GQ V
Sbjct: 10489 QDKDALMDMLTFPTVEDAIKKRVEMKTRTYGQEV 10388
>gb|AC018364.5|AC018364 Arabidopsis thaliana chromosome 1 BAC F23O10 genomic sequence, complete
sequence
Length = 93802
Score = 79.4 bits (167), Expect(3) = 1e-024
Identities = 35/101 (34%), Positives = 56/101 (55%)
Frame = +3 / -2
Query: 285 KYVAEVKFKDAPQEYSRLIKEKDSNSLMDMLTFXXXXXXXXXXXXXXXXTFGQNVTLDDN 464
KY+ + + + + L +D LM +LT+ FGQ++T++D
Sbjct: 15651 KYLTLLHYLQSSFVINWLESFQDRTQLMQLLTYETVEEVVKKRVEIKARIFGQDITINDP 15472
Query: 465 ATAGDSECKVDPKVLSKLYDQWVMPLTKDVEVEYLLRRLD* 587
T D K+ P +++KLY + +MPLTK+V++EYLLRRLD*
Sbjct: 15471 ETEADPSYKIQPSLVAKLYGERIMPLTKEVQIEYLLRRLD* 15349
Score = 53.8 bits (111), Expect(3) = 1e-024
Identities = 21/52 (40%), Positives = 26/52 (50%)
Frame = +3 / -3
Query: 111 KVLHPFASLVTVNDAIWKMYFDELLPLFTVDGDDGSYAQTVALDLACLQVLS 266
+VLH A + +N +W MYF LLP GDDG+ D CLQ S
Sbjct: 15998 QVLHRCAESININKKVWNMYFKHLLPRLVKPGDDGNCGSAALCDTMCLQARS 15843
Score = 37.7 bits (76), Expect(3) = 1e-024
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3 / -1
Query: 36 YQKPEDVPFFPQDLPSPLFPTKPSPKV 116
Y+ P++ PFFPQ LP P+ P P+V
Sbjct: 16174 YKSPDEHPFFPQCLPEPILPPIQYPQV 16094
>gb|AC073178.9|AC073178 Arabidopsis thaliana chromosome 1 BAC F10D13 genomic sequence, complete
sequence
Length = 107214
Score = 79.4 bits (167), Expect(3) = 1e-024
Identities = 35/101 (34%), Positives = 56/101 (55%)
Frame = +3 / +2
Query: 285 KYVAEVKFKDAPQEYSRLIKEKDSNSLMDMLTFXXXXXXXXXXXXXXXXTFGQNVTLDDN 464
KY+ + + + + L +D LM +LT+ FGQ++T++D
Sbjct: 24578 KYLTLLHYLQSSFVINWLESFQDRTQLMQLLTYETVEEVVKKRVEIKARIFGQDITINDP 24757
Query: 465 ATAGDSECKVDPKVLSKLYDQWVMPLTKDVEVEYLLRRLD* 587
T D K+ P +++KLY + +MPLTK+V++EYLLRRLD*
Sbjct: 24758 ETEADPSYKIQPSLVAKLYGERIMPLTKEVQIEYLLRRLD* 24880
Score = 53.8 bits (111), Expect(3) = 1e-024
Identities = 21/52 (40%), Positives = 26/52 (50%)
Frame = +3 / +3
Query: 111 KVLHPFASLVTVNDAIWKMYFDELLPLFTVDGDDGSYAQTVALDLACLQVLS 266
+VLH A + +N +W MYF LLP GDDG+ D CLQ S
Sbjct: 24231 QVLHRCAESININKKVWNMYFKHLLPRLVKPGDDGNCGSAALCDTMCLQARS 24386
Score = 37.7 bits (76), Expect(3) = 1e-024
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3 / +1
Query: 36 YQKPEDVPFFPQDLPSPLFPTKPSPKV 116
Y+ P++ PFFPQ LP P+ P P+V
Sbjct: 24055 YKSPDEHPFFPQCLPEPILPPIQYPQV 24135
>gb|AI995910.1|AI995910 701549173 A. thaliana, Columbia Col-0, inflorescence-2 Arabidopsis
thaliana cDNA clone 701549173, mRNA sequence
Length = 461
Score = 72.5 bits (152), Expect(2) = 1e-021
Identities = 27/51 (52%), Positives = 40/51 (78%)
Frame = +3 / -2
Query: 435 FGQNVTLDDNATAGDSECKVDPKVLSKLYDQWVMPLTKDVEVEYLLRRLD* 587
FGQ++T++D T D K+ P +++KLY + +MPLTK+V++EYLLRRLD*
Sbjct: 295 FGQDITINDPETEADPSYKIQPSLVAKLYGERIMPLTKEVQIEYLLRRLD* 143
Score = 53.3 bits (110), Expect(2) = 1e-021
Identities = 20/38 (52%), Positives = 26/38 (68%)
Frame = +3 / -1
Query: 270 RIHIGKYVAEVKFKDAPQEYSRLIKEKDSNSLMDMLTF 383
RIH GK+VAE KF++ P Y IKE+D LM +LT+
Sbjct: 461 RIHFGKFVAEAKFRENPAAYETAIKEQDRTQLMQLLTY 348
>gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom arm complete sequence
Length = 14668883
Score = 53.8 bits (111), Expect(3) = 2e-021
Identities = 21/52 (40%), Positives = 26/52 (50%)
Frame = +3 / +1
Query: 111 KVLHPFASLVTVNDAIWKMYFDELLPLFTVDGDDGSYAQTVALDLACLQVLS 266
+VLH A + +N +W MYF LLP GDDG+ D CLQ S
Sbjct: 10323106 QVLHRCAESININKKVWNMYFKHLLPRLVKPGDDGNCGSAALCDTMCLQARS 10323261
Score = 50.1 bits (103), Expect(3) = 2e-021
Identities = 19/33 (57%), Positives = 25/33 (75%)
Frame = +3 / +1
Query: 252 LQVLSQRIHIGKYVAEVKFKDAPQEYSRLIKEK 350
LQ+LS+RIH GK+VAE KF++ P Y IKE+
Sbjct: 10323331 LQILSKRIHFGKFVAEAKFRENPAAYETAIKEQ 10323429
Score = 37.7 bits (76), Expect(3) = 2e-021
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3 / +2
Query: 36 YQKPEDVPFFPQDLPSPLFPTKPSPKV 116
Y+ P++ PFFPQ LP P+ P P+V
Sbjct: 10322930 YKSPDEHPFFPQCLPEPILPPIQYPQV 10323010
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,716,465,029
Number of Sequences: 1013581
Number of extensions: 24519909
Number of successful extensions: 189542
Number of sequences better than 1.0e-020: 40
length of database: 302,980,290
effective HSP length: 56
effective length of database: 246,219,754
effective search space used: 54414565634
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)