TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3064721.2.2
(595 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CK118895.1|CK118895 215h19.p1 AtM1 Arabidopsis thaliana ... 240 3e-062
gb|AY056202.1| Arabidopsis thaliana unknown protein (At5g47... 240 3e-062
gb|AY091394.1| Arabidopsis thaliana unknown protein (At5g47... 240 3e-062
ref|NM_124152.2| Arabidopsis thaliana transferase, transfer... 240 3e-062
emb|BX832170.1|CNS09ZMF Arabidopsis thaliana Full-length cD... 237 2e-061
dbj|AB016886.1| Arabidopsis thaliana genomic DNA, chromosom... 193 6e-057
emb|BX831422.1|CNS09ZHW Arabidopsis thaliana Full-length cD... 220 3e-056
gb|BP579865.1|BP579865 BP579865 RAFL14 Arabidopsis thaliana... 127 3e-056
gb|BP782448.1|BP782448 BP782448 RAFL7 Arabidopsis thaliana ... 213 5e-054
gb|BP794645.1|BP794645 BP794645 RAFL7 Arabidopsis thaliana ... 210 2e-053
gb|BP792188.1|BP792188 BP792188 RAFL7 Arabidopsis thaliana ... 209 8e-053
gb|AV548282.1|AV548282 AV548282 Arabidopsis thaliana roots ... 201 1e-050
emb|BX824243.1|CNS0A7GQ Arabidopsis thaliana Full-length cD... 201 1e-050
ref|NM_115977.2| Arabidopsis thaliana transferase, transfer... 201 1e-050
gb|BP583509.1|BP583509 BP583509 RAFL14 Arabidopsis thaliana... 136 1e-050
gb|AV563687.1|AV563687 AV563687 Arabidopsis thaliana green ... 199 9e-050
emb|AX506425.1| Sequence 1120 from Patent WO0216655 195 1e-048
emb|BX826841.1|CNS0A2D1 Arabidopsis thaliana Full-length cD... 195 1e-048
ref|NM_119989.3| Arabidopsis thaliana transferase, transfer... 195 1e-048
gb|AV791064.1|AV791064 AV791064 RAFL7 Arabidopsis thaliana ... 193 3e-048
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 193 3e-048
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 193 3e-048
gb|AV559969.1|AV559969 AV559969 Arabidopsis thaliana green ... 192 1e-047
gb|AY099574.1| Arabidopsis thaliana glycosyl transferase, p... 192 1e-047
emb|BX823546.1|CNS0A4R3 Arabidopsis thaliana Full-length cD... 192 1e-047
ref|NM_113418.3| Arabidopsis thaliana QUA1 (QUASIMODO1); tr... 192 1e-047
gb|BX834173.1|BX834173 BX834173 Arabidopsis thaliana Adult ... 191 1e-047
gb|AI996052.1|AI996052 701549776 A. thaliana, Columbia Col-... 190 3e-047
gb|BT010393.1| Arabidopsis thaliana At3g25140 mRNA, complet... 190 3e-047
ref|NM_130212.2| Arabidopsis thaliana transferase, transfer... 189 5e-047
emb|AL137898.1|ATT20K12 Arabidopsis thaliana DNA chromosome... 160 2e-046
emb|AJ243015.1|ATH243015 Arabidopsis thaliana LGT1 gene, an... 160 2e-046
gb|AV559980.1|AV559980 AV559980 Arabidopsis thaliana green ... 186 5e-046
gb|AY039515.1| Arabidopsis thaliana AT3g61130/T20K12_30 mRN... 112 8e-046
gb|BP602123.1|BP602123 BP602123 RAFL16 Arabidopsis thaliana... 175 8e-046
emb|BX826627.1|CNS0A3BD Arabidopsis thaliana Full-length cD... 184 2e-045
gb|AV553351.1|AV553351 AV553351 Arabidopsis thaliana roots ... 179 5e-044
gb|AY078957.1| Arabidopsis thaliana AT3g02350/F11A12_103 mR... 179 5e-044
gb|AY084528.1| Arabidopsis thaliana clone 110819 mRNA, comp... 179 5e-044
emb|BX826005.1|CNS0A7K4 Arabidopsis thaliana Full-length cD... 179 5e-044
dbj|AK221962.1| Arabidopsis thaliana mRNA for hypothetical ... 179 5e-044
ref|NM_111102.1| Arabidopsis thaliana transferase, transfer... 179 5e-044
gb|BT004530.1| Arabidopsis thaliana At3g02350/F11A12_103 ge... 178 1e-043
emb|BX823985.1|CNS0A7D9 Arabidopsis thaliana Full-length cD... 178 1e-043
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 150 2e-043
emb|AL161593.2|ATCHRIV89 Arabidopsis thaliana DNA chromosom... 150 2e-043
emb|AL035538.1|ATF20D10 Arabidopsis thaliana DNA chromosome... 150 2e-043
emb|AL035539.1|ATF22I13 Arabidopsis thaliana DNA chromosome... 150 2e-043
dbj|AB026647.1| Arabidopsis thaliana genomic DNA, chromosom... 155 2e-042
gb|AC006526.8| Arabidopsis thaliana chromosome 2 clone F11C... 146 7e-042
gb|AC006418.4| Arabidopsis thaliana chromosome 2 clone F13A... 146 7e-042
gb|BP588020.1|BP588020 BP588020 RAFL15 Arabidopsis thaliana... 165 1e-039
gb|AC068900.3|AC068900 Arabidopsis thaliana chromosome 3 BA... 144 8e-039
gb|AV565879.1|AV565879 AV565879 Arabidopsis thaliana green ... 161 1e-038
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 160 2e-038
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 160 2e-038
gb|AV539871.1|AV539871 AV539871 Arabidopsis thaliana roots ... 159 9e-038
gb|AV561867.1|AV561867 AV561867 Arabidopsis thaliana green ... 159 9e-038
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 157 2e-037
gb|AY062444.1| Arabidopsis thaliana Unknown protein (At1g18... 157 2e-037
gb|AY050967.1| Arabidopsis thaliana unknown protein (At1g18... 157 2e-037
gb|AC026238.2| Arabidopsis thaliana chromosome I BAC F25I16... 157 2e-037
emb|BX816997.1|CNS0AE1I Arabidopsis thaliana Full-length cD... 157 2e-037
ref|NM_101716.2| Arabidopsis thaliana unknown protein AT1G1... 157 2e-037
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 157 2e-037
gb|AU228312.1|AU228312 AU228312 RAFL16 Arabidopsis thaliana... 157 3e-037
gb|AC006234.4| Arabidopsis thaliana chromosome 2 clone F5H1... 101 3e-037
gb|AY735579.1| Arabidopsis thaliana hypothetical protein AT... 101 3e-037
dbj|AK176863.1| Arabidopsis thaliana mRNA, complete cds, cl... 101 3e-037
ref|NM_127647.2| Arabidopsis thaliana transferase, transfer... 101 3e-037
gb|AY035019.1| Arabidopsis thaliana unknown protein (At2g20... 101 3e-037
gb|AY059085.1| Arabidopsis thaliana unknown protein (At2g20... 101 3e-037
gb|AV783162.1|AV783162 AV783162 RAFL5 Arabidopsis thaliana ... 101 3e-037
gb|AV561436.1|AV561436 AV561436 Arabidopsis thaliana green ... 101 3e-037
gb|CC886587.1|CC886587 SALK_148781.48.20.x Arabidopsis thal... 156 6e-037
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 150 3e-035
gb|AC008261.5|ATAC008261 Arabidopsis thaliana chromosome II... 128 4e-035
gb|AY839934.1| Arabidopsis thaliana glycosyl transferase fa... 128 4e-035
ref|NM_110969.2| Arabidopsis thaliana transferase, transfer... 127 4e-035
gb|CD533901.1|CD533901 34F4 Arabidopsis Leaf Senescence Lib... 127 4e-035
gb|AV558402.1|AV558402 AV558402 Arabidopsis thaliana green ... 148 2e-034
gb|AY081313.1| Arabidopsis thaliana unknown protein mRNA, c... 148 2e-034
gb|BT002563.1| Arabidopsis thaliana unknown protein mRNA, c... 148 2e-034
ref|NM_179819.1| Arabidopsis thaliana transferase, transfer... 148 2e-034
emb|AL391143.1|ATT20K14 Arabidopsis thaliana DNA chromosome... 127 2e-034
ref|NM_121551.3| Arabidopsis thaliana transferase, transfer... 126 2e-034
dbj|AK118651.1| Arabidopsis thaliana At5g15470 mRNA for unk... 126 2e-034
gb|BT005899.1| Arabidopsis thaliana At5g15470 gene, complet... 126 2e-034
gb|AV816198.1|AV816198 AV816198 RAFL9 Arabidopsis thaliana ... 147 3e-034
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 146 5e-034
gb|CK118448.1|CK118448 217d09.p1 AtM1 Arabidopsis thaliana ... 145 1e-033
gb|AV790907.1|AV790907 AV790907 RAFL7 Arabidopsis thaliana ... 143 6e-033
gb|AV795645.1|AV795645 AV795645 RAFL8 Arabidopsis thaliana ... 143 6e-033
gb|AV808845.1|AV808845 AV808845 RAFL9 Arabidopsis thaliana ... 143 6e-033
gb|AY045900.1| Arabidopsis thaliana unknown protein (At1g06... 143 6e-033
gb|AY091452.1| Arabidopsis thaliana unknown protein (At1g06... 143 6e-033
ref|NM_100555.2| Arabidopsis thaliana transferase, transfer... 143 6e-033
emb|BX830067.1|CNS0A1RY Arabidopsis thaliana Full-length cD... 122 1e-032
gb|BP565338.1|BP565338 BP565338 RAFL14 Arabidopsis thaliana... 74 1e-032
gb|BP635596.1|BP635596 BP635596 RAFL18 Arabidopsis thaliana... 138 2e-031
gb|BT000630.1| Arabidopsis thaliana unknown protein (At3g6... 93 1e-030
gb|BP648032.1|BP648032 BP648032 RAFL19 Arabidopsis thaliana... 78 3e-030
gb|Z30877.1|Z30877 ATTS2629 Versailles-VB Arabidopsis thali... 96 6e-030
emb|AX510096.1| Sequence 4791 from Patent WO0216655 122 1e-029
gb|AV810311.1|AV810311 AV810311 RAFL9 Arabidopsis thaliana ... 130 3e-029
gb|BP586609.1|BP586609 BP586609 RAFL15 Arabidopsis thaliana... 130 4e-029
gb|BP620140.1|BP620140 BP620140 RAFL16 Arabidopsis thaliana... 130 4e-029
gb|BP608701.1|BP608701 BP608701 RAFL16 Arabidopsis thaliana... 106 7e-029
gb|CK119534.1|CK119534 201g09.p1 AtM1 Arabidopsis thaliana ... 128 1e-028
gb|BP565615.1|BP565615 BP565615 RAFL14 Arabidopsis thaliana... 107 3e-028
gb|U93215.3| Arabidopsis thaliana chromosome 2 BAC T6B20 ge... 122 5e-028
gb|BP612928.1|BP612928 BP612928 RAFL16 Arabidopsis thaliana... 125 1e-027
gb|AI996484.1|AI996484 701666872 A. thaliana, Columbia Col-... 125 1e-027
gb|AV803334.1|AV803334 AV803334 RAFL9 Arabidopsis thaliana ... 124 2e-027
gb|BP605408.1|BP605408 BP605408 RAFL16 Arabidopsis thaliana... 124 2e-027
gb|CB260751.1|CB260751 69-E9570-012-004-I19-T7R MPIZ-ADIS-0... 113 2e-027
gb|BP582600.1|BP582600 BP582600 RAFL14 Arabidopsis thaliana... 107 6e-027
gb|AC011001.2|AC011001 Arabidopsis thaliana chromosome I BA... 122 7e-027
gb|BP598303.1|BP598303 BP598303 RAFL16 Arabidopsis thaliana... 119 6e-026
dbj|AB022214.1| Arabidopsis thaliana genomic DNA, chromosom... 105 7e-026
gb|BT023729.1| Arabidopsis thaliana At5g54690 gene, complet... 104 2e-025
ref|NM_124850.2| Arabidopsis thaliana transferase, transfer... 104 2e-025
gb|AV566703.1|AV566703 AV566703 Arabidopsis thaliana green ... 75 3e-025
gb|AV810826.1|AV810826 AV810826 RAFL9 Arabidopsis thaliana ... 117 3e-025
gb|B98098.1|B98098 F23O23TRB IGF Arabidopsis thaliana genom... 116 4e-025
gb|BP589436.1|BP589436 BP589436 RAFL15 Arabidopsis thaliana... 75 9e-025
gb|AY050982.1| Arabidopsis thaliana unknown protein (At2g38... 114 2e-024
gb|AY091448.1| Arabidopsis thaliana unknown protein (At2g38... 114 2e-024
gb|AC005499.3| Arabidopsis thaliana chromosome 2 clone T6A2... 114 2e-024
ref|NM_129422.2| Arabidopsis thaliana transferase, transfer... 114 2e-024
emb|AX507156.1| Sequence 1851 from Patent WO0216655 114 3e-024
gb|BP582407.1|BP582407 BP582407 RAFL14 Arabidopsis thaliana... 113 5e-024
gb|AV558460.1|AV558460 AV558460 Arabidopsis thaliana green ... 112 7e-024
gb|BP568997.1|BP568997 BP568997 RAFL14 Arabidopsis thaliana... 112 7e-024
gb|BP788528.1|BP788528 BP788528 RAFL7 Arabidopsis thaliana ... 112 7e-024
emb|BX285189.1| Arabidopsis thaliana T-DNA flanking sequenc... 74 1e-023
gb|BP570849.1|BP570849 BP570849 RAFL14 Arabidopsis thaliana... 111 2e-023
gb|BP578604.1|BP578604 BP578604 RAFL14 Arabidopsis thaliana... 111 2e-023
gb|BH753712.1|BH753712 SALK_029525.45.75.x Arabidopsis thal... 100 3e-023
gb|BP612199.1|BP612199 BP612199 RAFL16 Arabidopsis thaliana... 110 5e-023
gb|BP574502.1|BP574502 BP574502 RAFL14 Arabidopsis thaliana... 109 7e-023
gb|AV792171.1|AV792171 AV792171 RAFL7 Arabidopsis thaliana ... 108 2e-022
gb|AV565656.1|AV565656 AV565656 Arabidopsis thaliana green ... 107 2e-022
gb|AV791493.1|AV791493 AV791493 RAFL7 Arabidopsis thaliana ... 106 6e-022
gb|BE038625.1|BE038625 AB03B07 AB Arabidopsis thaliana cDNA... 105 1e-021
gb|BP664447.1|BP664447 BP664447 RAFL21 Arabidopsis thaliana... 54 2e-021
gb|CK120404.1|CK120404 218n02.p1 AtM1 Arabidopsis thaliana ... 105 2e-021
gb|BP618000.1|BP618000 BP618000 RAFL16 Arabidopsis thaliana... 95 3e-021
gb|BP794018.1|BP794018 BP794018 RAFL7 Arabidopsis thaliana ... 104 3e-021
>gb|CK118895.1|CK118895 215h19.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011H19215
5-PRIME, mRNA sequence
Length = 484
Score = 240 bits (518), Expect = 3e-062
Identities = 86/115 (74%), Positives = 102/115 (88%)
Frame = +3 / +3
Query: 3 NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
N+FDL +W++QNITEVYH WQ LN++R LWKLGTLP GL+TFW RT+PLDR WH LGLGY
Sbjct: 72 NVFDLDEWKRQNITEVYHRWQDLNQDRELWKLGTLPPGLITFWRRTYPLDRKWHILGLGY 251
Query: 183 NPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNINP* 347
NP+VN +DI RAAVIHYNGNLKPWLEIG+P+YR +WS HV+Y+ V+LRECNINP*
Sbjct: 252 NPSVNQRDIERAAVIHYNGNLKPWLEIGIPRYRGFWSKHVDYEHVYLRECNINP* 416
Score = 139 bits (299), Expect = 5e-032
Identities = 68/114 (59%), Positives = 71/114 (62%)
Frame = -1 / -1
Query: 343 GFMLHSRRNT*S*LTCADQYLRYFGNPISSQGFRFPL*WMTAARLISLTLTFGLYPSPN* 164
G MLHS R T S* TC DQ Y G PISS G R PL* +TAA ISL T GLYPSP+
Sbjct: 412 GLMLHSLR*TCS*STCFDQKPLYLGIPISSHGLRLPL*CITAALSISLWFTLGLYPSPSM 233
Query: 163 CHERSRGNVRFQKVTRPAGRVPSFHNSLFSFNFCQVW*TSVMFCFLQSPKSNMF 2
CH RS G VR Q V RP G VPSFHNS F C *TSVMFC S +S F
Sbjct: 232 CHFRSSGYVRLQNVIRPGGNVPSFHNSRS*FRSCHR**TSVMFCLFHSSRSKTF 71
>gb|AY056202.1| Arabidopsis thaliana unknown protein (At5g47780) mRNA, complete cds
Length = 2084
Score = 240 bits (518), Expect = 3e-062
Identities = 86/115 (74%), Positives = 102/115 (88%)
Frame = +3 / +3
Query: 3 NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
N+FDL +W++QNITEVYH WQ LN++R LWKLGTLP GL+TFW RT+PLDR WH LGLGY
Sbjct: 1572 NVFDLDEWKRQNITEVYHRWQDLNQDRELWKLGTLPPGLITFWRRTYPLDRKWHILGLGY 1751
Query: 183 NPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNINP* 347
NP+VN +DI RAAVIHYNGNLKPWLEIG+P+YR +WS HV+Y+ V+LRECNINP*
Sbjct: 1752 NPSVNQRDIERAAVIHYNGNLKPWLEIGIPRYRGFWSKHVDYEHVYLRECNINP* 1916
Score = 139 bits (299), Expect = 5e-032
Identities = 68/114 (59%), Positives = 71/114 (62%)
Frame = -1 / -2
Query: 343 GFMLHSRRNT*S*LTCADQYLRYFGNPISSQGFRFPL*WMTAARLISLTLTFGLYPSPN* 164
G MLHS R T S* TC DQ Y G PISS G R PL* +TAA ISL T GLYPSP+
Sbjct: 1912 GLMLHSLR*TCS*STCFDQKPLYLGIPISSHGLRLPL*CITAALSISLWFTLGLYPSPSM 1733
Query: 163 CHERSRGNVRFQKVTRPAGRVPSFHNSLFSFNFCQVW*TSVMFCFLQSPKSNMF 2
CH RS G VR Q V RP G VPSFHNS F C *TSVMFC S +S F
Sbjct: 1732 CHFRSSGYVRLQNVIRPGGNVPSFHNSRS*FRSCHR**TSVMFCLFHSSRSKTF 1571
>gb|AY091394.1| Arabidopsis thaliana unknown protein (At5g47780) mRNA, complete cds
Length = 1882
Score = 240 bits (518), Expect = 3e-062
Identities = 86/115 (74%), Positives = 102/115 (88%)
Frame = +3 / +1
Query: 3 NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
N+FDL +W++QNITEVYH WQ LN++R LWKLGTLP GL+TFW RT+PLDR WH LGLGY
Sbjct: 1507 NVFDLDEWKRQNITEVYHRWQDLNQDRELWKLGTLPPGLITFWRRTYPLDRKWHILGLGY 1686
Query: 183 NPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNINP* 347
NP+VN +DI RAAVIHYNGNLKPWLEIG+P+YR +WS HV+Y+ V+LRECNINP*
Sbjct: 1687 NPSVNQRDIERAAVIHYNGNLKPWLEIGIPRYRGFWSKHVDYEHVYLRECNINP* 1851
Score = 139 bits (299), Expect = 5e-032
Identities = 68/114 (59%), Positives = 71/114 (62%)
Frame = -1 / -3
Query: 343 GFMLHSRRNT*S*LTCADQYLRYFGNPISSQGFRFPL*WMTAARLISLTLTFGLYPSPN* 164
G MLHS R T S* TC DQ Y G PISS G R PL* +TAA ISL T GLYPSP+
Sbjct: 1847 GLMLHSLR*TCS*STCFDQKPLYLGIPISSHGLRLPL*CITAALSISLWFTLGLYPSPSM 1668
Query: 163 CHERSRGNVRFQKVTRPAGRVPSFHNSLFSFNFCQVW*TSVMFCFLQSPKSNMF 2
CH RS G VR Q V RP G VPSFHNS F C *TSVMFC S +S F
Sbjct: 1667 CHFRSSGYVRLQNVIRPGGNVPSFHNSRS*FRSCHR**TSVMFCLFHSSRSKTF 1506
>ref|NM_124152.2| Arabidopsis thaliana transferase, transferring glycosyl groups
AT5G47780 mRNA, complete cds
Length = 2075
Score = 240 bits (518), Expect = 3e-062
Identities = 86/115 (74%), Positives = 102/115 (88%)
Frame = +3 / +1
Query: 3 NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
N+FDL +W++QNITEVYH WQ LN++R LWKLGTLP GL+TFW RT+PLDR WH LGLGY
Sbjct: 1579 NVFDLDEWKRQNITEVYHRWQDLNQDRELWKLGTLPPGLITFWRRTYPLDRKWHILGLGY 1758
Query: 183 NPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNINP* 347
NP+VN +DI RAAVIHYNGNLKPWLEIG+P+YR +WS HV+Y+ V+LRECNINP*
Sbjct: 1759 NPSVNQRDIERAAVIHYNGNLKPWLEIGIPRYRGFWSKHVDYEHVYLRECNINP* 1923
Score = 139 bits (299), Expect = 5e-032
Identities = 68/114 (59%), Positives = 71/114 (62%)
Frame = -1 / -1
Query: 343 GFMLHSRRNT*S*LTCADQYLRYFGNPISSQGFRFPL*WMTAARLISLTLTFGLYPSPN* 164
G MLHS R T S* TC DQ Y G PISS G R PL* +TAA ISL T GLYPSP+
Sbjct: 1919 GLMLHSLR*TCS*STCFDQKPLYLGIPISSHGLRLPL*CITAALSISLWFTLGLYPSPSM 1740
Query: 163 CHERSRGNVRFQKVTRPAGRVPSFHNSLFSFNFCQVW*TSVMFCFLQSPKSNMF 2
CH RS G VR Q V RP G VPSFHNS F C *TSVMFC S +S F
Sbjct: 1739 CHFRSSGYVRLQNVIRPGGNVPSFHNSRS*FRSCHR**TSVMFCLFHSSRSKTF 1578
>emb|BX832170.1|CNS09ZMF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH56ZC06 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1922
Score = 237 bits (512), Expect = 2e-061
Identities = 85/115 (73%), Positives = 101/115 (87%)
Frame = +3 / +2
Query: 3 NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
N+FDL +W++QNITEVYH WQ LN++R LWKLGTLP GL+TFW RT+PLDR WH LGLGY
Sbjct: 1559 NVFDLDEWKRQNITEVYHRWQDLNQDRELWKLGTLPPGLITFWRRTYPLDRKWHILGLGY 1738
Query: 183 NPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNINP* 347
NP+VN +DI RAAVIHYNGNLKPWLEIG+P+YR +WS HV+Y+ V+LRECNI P*
Sbjct: 1739 NPSVNQRDIERAAVIHYNGNLKPWLEIGIPRYRGFWSKHVDYEHVYLRECNIKP* 1903
Score = 139 bits (299), Expect = 5e-032
Identities = 68/114 (59%), Positives = 71/114 (62%)
Frame = -1 / -3
Query: 343 GFMLHSRRNT*S*LTCADQYLRYFGNPISSQGFRFPL*WMTAARLISLTLTFGLYPSPN* 164
G MLHS R T S* TC DQ Y G PISS G R PL* +TAA ISL T GLYPSP+
Sbjct: 1899 GLMLHSLR*TCS*STCFDQKPLYLGIPISSHGLRLPL*CITAALSISLWFTLGLYPSPSM 1720
Query: 163 CHERSRGNVRFQKVTRPAGRVPSFHNSLFSFNFCQVW*TSVMFCFLQSPKSNMF 2
CH RS G VR Q V RP G VPSFHNS F C *TSVMFC S +S F
Sbjct: 1719 CHFRSSGYVRLQNVIRPGGNVPSFHNSRS*FRSCHR**TSVMFCLFHSSRSKTF 1558
>dbj|AB016886.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCA23
Length = 82503
Score = 193 bits (417), Expect(2) = 6e-057
Identities = 70/92 (76%), Positives = 82/92 (89%)
Frame = +3 / +1
Query: 72 NENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGYNPNVNVKDIRRAAVIHYNGNLKP 251
N++R LWKLGTLP GL+TFW RT+PLDR WH LGLGYNP+VN +DI RAAVIHYNGNLKP
Sbjct: 27475 NQDRELWKLGTLPPGLITFWRRTYPLDRKWHILGLGYNPSVNQRDIERAAVIHYNGNLKP 27654
Query: 252 WLEIGLPKYRKYWSAHVNYDQVFLRECNINP* 347
WLEIG+P+YR +WS HV+Y+ V+LRECNINP*
Sbjct: 27655 WLEIGIPRYRGFWSKHVDYEHVYLRECNINP* 27750
Score = 118 bits (253), Expect(2) = 2e-028
Identities = 56/87 (64%), Positives = 58/87 (66%)
Frame = -1 / -2
Query: 343 GFMLHSRRNT*S*LTCADQYLRYFGNPISSQGFRFPL*WMTAARLISLTLTFGLYPSPN* 164
G MLHS R T S* TC DQ Y G PISS G R PL* +TAA ISL T GLYPSP+
Sbjct: 27746 GLMLHSLR*TCS*STCFDQKPLYLGIPISSHGLRLPL*CITAALSISLWFTLGLYPSPSM 27567
Query: 163 CHERSRGNVRFQKVTRPAGRVPSFHNS 83
CH RS G VR Q V RP G VPSFHNS
Sbjct: 27566 CHFRSSGYVRLQNVIRPGGNVPSFHNS 27486
Score = 49.2 bits (101), Expect(2) = 6e-057
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = +3 / +1
Query: 3 NMFDLGDWRKQNITEVYHTWQKL 71
N+FDL +W++QNITEVYH WQ L
Sbjct: 27316 NVFDLDEWKRQNITEVYHRWQDL 27384
Score = 28.6 bits (56), Expect(2) = 2e-028
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3 / -1
Query: 71 QLLPGMVDLSDVLLSPVAQIKHV 3
Q+LP M++ DVL P QIK +
Sbjct: 27384 QILPSMINFCDVLPLPFIQIKDI 27316
>emb|BX831422.1|CNS09ZHW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS88ZH04 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1933
Score = 220 bits (475), Expect = 3e-056
Identities = 81/115 (70%), Positives = 97/115 (84%)
Frame = +3 / +2
Query: 3 NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
N+FDL +W++QNITEVYH W LN++R LWKL TLP GL+TFW RT+PLDR WH L L Y
Sbjct: 1514 NVFDLDEWKRQNITEVYHRWHDLNQDRELWKLRTLPPGLITFWRRTYPLDRKWHILRLRY 1693
Query: 183 NPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNINP* 347
NP+VN +DI RAAVIHYNGNLKP LEIG+P+YR +WS HV+Y+ V+LRECNINP*
Sbjct: 1694 NPSVNQRDIERAAVIHYNGNLKPSLEIGIPRYRGFWSKHVDYEHVYLRECNINP* 1858
Score = 127 bits (272), Expect = 3e-028
Identities = 65/114 (57%), Positives = 68/114 (59%)
Frame = -1 / -2
Query: 343 GFMLHSRRNT*S*LTCADQYLRYFGNPISSQGFRFPL*WMTAARLISLTLTFGLYPSPN* 164
G MLHS R T S* TC DQ Y G PISS G R PL* +TAA ISL T GLY S +
Sbjct: 1854 GLMLHSLR*TCS*STCFDQKPLYLGIPISSDGLRLPL*CITAALSISLWFTLGLYRSRSM 1675
Query: 163 CHERSRGNVRFQKVTRPAGRVPSFHNSLFSFNFCQVW*TSVMFCFLQSPKSNMF 2
CH RS G VR Q V RP G V SFHNS F C *TSVMFC S +S F
Sbjct: 1674 CHFRSSGYVRLQNVIRPGGNVRSFHNSRS*FRSCHR**TSVMFCLFHSSRSKTF 1513
>gb|BP579865.1|BP579865 BP579865 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-24-H24 3',
mRNA sequence
Length = 489
Score = 127 bits (272), Expect(2) = 3e-056
Identities = 46/60 (76%), Positives = 55/60 (91%)
Frame = +3 / -3
Query: 168 LGLGYNPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNINP* 347
LGLGYNP+VN +DI RAA+IHYNGNLKPWLEIG+P+YR +WS HV+Y+ V+LRECNINP*
Sbjct: 268 LGLGYNPSVNQRDIERAALIHYNGNLKPWLEIGIPRYRGFWSKHVDYEHVYLRECNINP* 89
Score = 113 bits (241), Expect(2) = 3e-056
Identities = 38/54 (70%), Positives = 47/54 (87%)
Frame = +3 / -2
Query: 3 NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWH 164
++FDL +W++QNITEVYH WQ LN++R LWKLGTLP GL+TFW RT+PLDR WH
Sbjct: 434 DVFDLDEWKRQNITEVYHRWQDLNQDRELWKLGTLPPGLITFWRRTYPLDRKWH 273
Score = 72.1 bits (151), Expect(2) = 3e-026
Identities = 36/59 (61%), Positives = 38/59 (64%)
Frame = -1 / +3
Query: 343 GFMLHSRRNT*S*LTCADQYLRYFGNPISSQGFRFPL*WMTAARLISLTLTFGLYPSPN 167
G MLHS R T S* TC DQ Y G PISS G R PL* + AA ISL T GLYPSP+
Sbjct: 93 GLMLHSLR*TCS*STCFDQKPLYLGIPISSHGLRLPL*CIRAALSISLWFTLGLYPSPS 269
Score = 68.4 bits (143), Expect(2) = 3e-026
Identities = 30/51 (58%), Positives = 32/51 (62%)
Frame = -1 / +1
Query: 163 CHERSRGNVRFQKVTRPAGRVPSFHNSLFSFNFCQVW*TSVMFCFLQSPKS 11
CH RS G VR Q V RP G+VPSFHNS F C *TSVMFC S +S
Sbjct: 274 CHFRSSGYVRLQNVIRPGGKVPSFHNSRS*FRSCHR**TSVMFCLFHSSRS 426
>gb|BP782448.1|BP782448 BP782448 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-82-E03 3',
mRNA sequence
Length = 406
Score = 213 bits (459), Expect = 5e-054
Identities = 77/101 (76%), Positives = 89/101 (88%)
Frame = +3 / -2
Query: 45 EVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGYNPNVNVKDIRRAAV 224
EVYH WQ LN++R LWKLGTLP GL+TFW RT+PLDR WH LGLGYNP+VN +DI RAAV
Sbjct: 405 EVYHRWQDLNQDRELWKLGTLPPGLITFWRRTYPLDRKWHILGLGYNPSVNQRDIERAAV 226
Query: 225 IHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNINP* 347
IHYNGNLKPWLEIG+P+YR +WS HV+Y+ V+LRECNINP*
Sbjct: 225 IHYNGNLKPWLEIGIPRYRGFWSKHVDYEHVYLRECNINP* 103
Score = 122 bits (261), Expect = 9e-027
Identities = 61/100 (61%), Positives = 63/100 (63%)
Frame = -1 / +2
Query: 343 GFMLHSRRNT*S*LTCADQYLRYFGNPISSQGFRFPL*WMTAARLISLTLTFGLYPSPN* 164
G MLHS R T S* TC DQ Y G PISS G R PL* +TAA ISL T GLYPSP+
Sbjct: 107 GLMLHSLR*TCS*STCFDQKPLYLGIPISSHGLRLPL*CITAALSISLWFTLGLYPSPSM 286
Query: 163 CHERSRGNVRFQKVTRPAGRVPSFHNSLFSFNFCQVW*TS 44
CH RS G VR Q V RP G VPSFHNS F C *TS
Sbjct: 287 CHFRSSGYVRLQNVIRPGGNVPSFHNSRS*FRSCHR**TS 406
>gb|BP794645.1|BP794645 BP794645 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-61-F21 3',
mRNA sequence
Length = 404
Score = 210 bits (454), Expect = 2e-053
Identities = 76/100 (76%), Positives = 88/100 (88%)
Frame = +3 / -3
Query: 48 VYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGYNPNVNVKDIRRAAVI 227
VYH WQ LN++R LWKLGTLP GL+TFW RT+PLDR WH LGLGYNP+VN +DI RAAVI
Sbjct: 402 VYHRWQDLNQDRELWKLGTLPPGLITFWRRTYPLDRKWHILGLGYNPSVNQRDIERAAVI 223
Query: 228 HYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNINP* 347
HYNGNLKPWLEIG+P+YR +WS HV+Y+ V+LRECNINP*
Sbjct: 222 HYNGNLKPWLEIGIPRYRGFWSKHVDYEHVYLRECNINP* 103
Score = 121 bits (258), Expect = 2e-026
Identities = 58/94 (61%), Positives = 60/94 (63%)
Frame = -1 / +2
Query: 343 GFMLHSRRNT*S*LTCADQYLRYFGNPISSQGFRFPL*WMTAARLISLTLTFGLYPSPN* 164
G MLHS R T S* TC DQ Y G PISS G R PL* +TAA ISL T GLYPSP+
Sbjct: 107 GLMLHSLR*TCS*STCFDQKPLYLGIPISSHGLRLPL*CITAALSISLWFTLGLYPSPSM 286
Query: 163 CHERSRGNVRFQKVTRPAGRVPSFHNSLFSFNFC 62
CH RS G VR Q V RP G VPSFHNS F C
Sbjct: 287 CHFRSSGYVRLQNVIRPGGNVPSFHNSRS*FRSC 388
>gb|BP792188.1|BP792188 BP792188 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-50-M14 3',
mRNA sequence
Length = 400
Score = 209 bits (450), Expect = 8e-053
Identities = 75/99 (75%), Positives = 87/99 (87%)
Frame = +3 / -2
Query: 51 YHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGYNPNVNVKDIRRAAVIH 230
YH WQ LN++R LWKLGTLP GL+TFW RT+PLDR WH LGLGYNP+VN +DI RAAVIH
Sbjct: 399 YHRWQDLNQDRELWKLGTLPPGLITFWRRTYPLDRKWHILGLGYNPSVNQRDIERAAVIH 220
Query: 231 YNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNINP* 347
YNGNLKPWLEIG+P+YR +WS HV+Y+ V+LRECNINP*
Sbjct: 219 YNGNLKPWLEIGIPRYRGFWSKHVDYEHVYLRECNINP* 103
Score = 121 bits (258), Expect = 2e-026
Identities = 58/94 (61%), Positives = 60/94 (63%)
Frame = -1 / +2
Query: 343 GFMLHSRRNT*S*LTCADQYLRYFGNPISSQGFRFPL*WMTAARLISLTLTFGLYPSPN* 164
G MLHS R T S* TC DQ Y G PISS G R PL* +TAA ISL T GLYPSP+
Sbjct: 107 GLMLHSLR*TCS*STCFDQKPLYLGIPISSHGLRLPL*CITAALSISLWFTLGLYPSPSM 286
Query: 163 CHERSRGNVRFQKVTRPAGRVPSFHNSLFSFNFC 62
CH RS G VR Q V RP G VPSFHNS F C
Sbjct: 287 CHFRSSGYVRLQNVIRPGGNVPSFHNSRS*FRSC 388
>gb|AV548282.1|AV548282 AV548282 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZL50h12F 3', mRNA sequence
Length = 546
Score = 201 bits (434), Expect = 1e-050
Identities = 67/113 (59%), Positives = 92/113 (81%)
Frame = +3 / -2
Query: 3 NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
NMFDL +W+K++IT +YH WQ +NENR LWKLGTLP GL+TF+ T PL+++WH LGLGY
Sbjct: 542 NMFDLKEWKKRDITGIYHKWQNMNENRTLWKLGTLPPGLITFYGLTHPLNKAWHVLGLGY 363
Query: 183 NPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNIN 341
NP+++ KDI AAV+HYNGN+KPWLE+ + KYR YW+ ++ +D +LR CN++
Sbjct: 362 NPSIDKKDIENAAVVHYNGNMKPWLELAMSKYRPYWTKYIKFDHPYLRRCNLH 204
Score = 103 bits (220), Expect = 4e-021
Identities = 54/111 (48%), Positives = 61/111 (54%)
Frame = -1 / +1
Query: 334 LHSRRNT*S*LTCADQYLRYFGNPISSQGFRFPL*WMTAARLISLTLTFGLYPSPN*CHE 155
L RR *S L QY RY S+ GF FPL* TAA +S GLYPSP+ CH
Sbjct: 211 LQRRRYG*SNLMYLVQYGRYLDIANSNHGFMFPL**TTAAFSMSFLSILGLYPSPSTCHA 390
Query: 154 RSRGNVRFQKVTRPAGRVPSFHNSLFSFNFCQVW*TSVMFCFLQSPKSNMF 2
+G V V P G VPSFH+ LFSF FC +W VM F S +SNMF
Sbjct: 391 LFKGCVNP*NVINPGGNVPSFHSVLFSFMFCHLWYIPVMSLFFHSFRSNMF 543
>emb|BX824243.1|CNS0A7GQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH32ZE03 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 2452
Score = 201 bits (434), Expect = 1e-050
Identities = 67/113 (59%), Positives = 92/113 (81%)
Frame = +3 / +1
Query: 3 NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
NMFDL +W+K++IT +YH WQ +NENR LWKLGTLP GL+TF+ T PL+++WH LGLGY
Sbjct: 1951 NMFDLKEWKKRDITGIYHKWQNMNENRTLWKLGTLPPGLITFYGLTHPLNKAWHVLGLGY 2130
Query: 183 NPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNIN 341
NP+++ KDI AAV+HYNGN+KPWLE+ + KYR YW+ ++ +D +LR CN++
Sbjct: 2131 NPSIDKKDIENAAVVHYNGNMKPWLELAMSKYRPYWTKYIKFDHPYLRRCNLH 2289
Score = 103 bits (220), Expect = 4e-021
Identities = 54/111 (48%), Positives = 61/111 (54%)
Frame = -1 / -3
Query: 334 LHSRRNT*S*LTCADQYLRYFGNPISSQGFRFPL*WMTAARLISLTLTFGLYPSPN*CHE 155
L RR *S L QY RY S+ GF FPL* TAA +S GLYPSP+ CH
Sbjct: 2282 LQRRRYG*SNLMYLVQYGRYLDIANSNHGFMFPL**TTAAFSMSFLSILGLYPSPSTCHA 2103
Query: 154 RSRGNVRFQKVTRPAGRVPSFHNSLFSFNFCQVW*TSVMFCFLQSPKSNMF 2
+G V V P G VPSFH+ LFSF FC +W VM F S +SNMF
Sbjct: 2102 LFKGCVNP*NVINPGGNVPSFHSVLFSFMFCHLWYIPVMSLFFHSFRSNMF 1950
>ref|NM_115977.2| Arabidopsis thaliana transferase, transferring glycosyl groups
AT3G61130 mRNA, complete cds
Length = 2546
Score = 201 bits (434), Expect = 1e-050
Identities = 67/113 (59%), Positives = 92/113 (81%)
Frame = +3 / +2
Query: 3 NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
NMFDL +W+K++IT +YH WQ +NENR LWKLGTLP GL+TF+ T PL+++WH LGLGY
Sbjct: 2000 NMFDLKEWKKRDITGIYHKWQNMNENRTLWKLGTLPPGLITFYGLTHPLNKAWHVLGLGY 2179
Query: 183 NPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNIN 341
NP+++ KDI AAV+HYNGN+KPWLE+ + KYR YW+ ++ +D +LR CN++
Sbjct: 2180 NPSIDKKDIENAAVVHYNGNMKPWLELAMSKYRPYWTKYIKFDHPYLRRCNLH 2338
Score = 103 bits (220), Expect = 4e-021
Identities = 54/111 (48%), Positives = 61/111 (54%)
Frame = -1 / -3
Query: 334 LHSRRNT*S*LTCADQYLRYFGNPISSQGFRFPL*WMTAARLISLTLTFGLYPSPN*CHE 155
L RR *S L QY RY S+ GF FPL* TAA +S GLYPSP+ CH
Sbjct: 2331 LQRRRYG*SNLMYLVQYGRYLDIANSNHGFMFPL**TTAAFSMSFLSILGLYPSPSTCHA 2152
Query: 154 RSRGNVRFQKVTRPAGRVPSFHNSLFSFNFCQVW*TSVMFCFLQSPKSNMF 2
+G V V P G VPSFH+ LFSF FC +W VM F S +SNMF
Sbjct: 2151 LFKGCVNP*NVINPGGNVPSFHSVLFSFMFCHLWYIPVMSLFFHSFRSNMF 1999
>gb|BP583509.1|BP583509 BP583509 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-41-L14 3',
mRNA sequence
Length = 439
Score = 136 bits (291), Expect(2) = 1e-050
Identities = 49/63 (77%), Positives = 57/63 (90%)
Frame = +3 / -1
Query: 159 WHQLGLGYNPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNI 338
WH LGLGYNP+VN +DI RAAVIHYNGNLKPWLEIG+P+YR +WS HV+Y+ V+LRECNI
Sbjct: 277 WHILGLGYNPSVNQRDIERAAVIHYNGNLKPWLEIGIPRYRGFWSKHVDYEHVYLRECNI 98
Query: 339 NP* 347
NP*
Sbjct: 97 NP* 89
Score = 85.8 bits (181), Expect(2) = 1e-050
Identities = 30/42 (71%), Positives = 37/42 (88%)
Frame = +3 / -3
Query: 3 NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTF 128
N+FDL +W++QNITEVYH WQ LN++R LWKLGTLP GL+TF
Sbjct: 431 NVFDLDEWKRQNITEVYHRWQDLNQDRELWKLGTLPPGLITF 306
Score = 80.8 bits (170), Expect(2) = 9e-025
Identities = 39/62 (62%), Positives = 41/62 (66%)
Frame = -1 / +3
Query: 343 GFMLHSRRNT*S*LTCADQYLRYFGNPISSQGFRFPL*WMTAARLISLTLTFGLYPSPN* 164
G MLHS R T S* TC DQ Y G PISS G R PL* +TAA ISL T GLYPSP+
Sbjct: 93 GLMLHSLR*TCS*STCFDQKPLYLGIPISSHGLRLPL*CITAALSISLWFTLGLYPSPSM 272
Query: 163 CH 158
CH
Sbjct: 273 CH 278
Score = 54.7 bits (113), Expect(2) = 9e-025
Identities = 24/43 (55%), Positives = 26/43 (60%)
Frame = -1 / +1
Query: 130 QKVTRPAGRVPSFHNSLFSFNFCQVW*TSVMFCFLQSPKSNMF 2
Q V RP G+VPSFHNS F C *TSVMFC S +S F
Sbjct: 304 QNVIRPGGKVPSFHNSRS*FRSCHR**TSVMFCLFHSSRSKTF 432
>gb|AV563687.1|AV563687 AV563687 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ191e10F 3', mRNA sequence
Length = 560
Score = 199 bits (428), Expect = 9e-050
Identities = 66/112 (58%), Positives = 91/112 (81%)
Frame = +3 / -2
Query: 6 MFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGYN 185
MFDL +W+K++IT +YH WQ +NENR LWKLGTLP GL+TF+ T PL+++WH LGLGYN
Sbjct: 559 MFDLKEWKKRDITGIYHKWQNMNENRTLWKLGTLPPGLITFYGLTHPLNKAWHVLGLGYN 380
Query: 186 PNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNIN 341
P+++ KDI AAV+HYNGN+KPWLE+ + KYR YW+ ++ +D +LR CN++
Sbjct: 379 PSIDKKDIENAAVVHYNGNMKPWLELAMSKYRPYWTKYIKFDHPYLRRCNLH 224
>emb|AX506425.1| Sequence 1120 from Patent WO0216655
Length = 1977
Score = 195 bits (420), Expect = 1e-048
Identities = 70/113 (61%), Positives = 87/113 (76%)
Frame = +3 / +1
Query: 3 NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
NMFDL +WRK+NIT +YH WQ LNE+R LWKLG+LP GL+TF+N T+ +DRSWH LGLGY
Sbjct: 1633 NMFDLKEWRKRNITGIYHYWQDLNEDRTLWKLGSLPPGLITFYNLTYAMDRSWHVLGLGY 1812
Query: 183 NPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNIN 341
+P +N I AAV+HYNGN KPWL + KY+ YWS +V YD +LR C+IN
Sbjct: 1813 DPALNQTAIENAAVVHYNGNYKPWLGLAFAKYKPYWSKYVEYDNPYLRRCDIN 1971
>emb|BX826841.1|CNS0A2D1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB68ZF07 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 2208
Score = 195 bits (420), Expect = 1e-048
Identities = 70/113 (61%), Positives = 87/113 (76%)
Frame = +3 / +3
Query: 3 NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
NMFDL +WRK+NIT +YH WQ LNE+R LWKLG+LP GL+TF+N T+ +DRSWH LGLGY
Sbjct: 1758 NMFDLKEWRKRNITGIYHYWQDLNEDRTLWKLGSLPPGLITFYNLTYAMDRSWHVLGLGY 1937
Query: 183 NPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNIN 341
+P +N I AAV+HYNGN KPWL + KY+ YWS +V YD +LR C+IN
Sbjct: 1938 DPALNQTAIENAAVVHYNGNYKPWLGLAFAKYKPYWSKYVEYDNPYLRRCDIN 2096
>ref|NM_119989.3| Arabidopsis thaliana transferase, transferring glycosyl groups
AT4G38270 mRNA, complete cds
Length = 2247
Score = 195 bits (420), Expect = 1e-048
Identities = 70/113 (61%), Positives = 87/113 (76%)
Frame = +3 / +2
Query: 3 NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
NMFDL +WRK+NIT +YH WQ LNE+R LWKLG+LP GL+TF+N T+ +DRSWH LGLGY
Sbjct: 1760 NMFDLKEWRKRNITGIYHYWQDLNEDRTLWKLGSLPPGLITFYNLTYAMDRSWHVLGLGY 1939
Query: 183 NPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNIN 341
+P +N I AAV+HYNGN KPWL + KY+ YWS +V YD +LR C+IN
Sbjct: 1940 DPALNQTAIENAAVVHYNGNYKPWLGLAFAKYKPYWSKYVEYDNPYLRRCDIN 2098
>gb|AV791064.1|AV791064 AV791064 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-08-K13 3',
mRNA sequence
Length = 428
Score = 193 bits (417), Expect = 3e-048
Identities = 70/92 (76%), Positives = 82/92 (89%)
Frame = +3 / -1
Query: 72 NENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGYNPNVNVKDIRRAAVIHYNGNLKP 251
N++R LWKLGTLP GL+TFW RT+PLDR WH LGLGYNP+VN +DI RAAVIHYNGNLKP
Sbjct: 428 NQDRELWKLGTLPPGLITFWRRTYPLDRKWHILGLGYNPSVNQRDIERAAVIHYNGNLKP 249
Query: 252 WLEIGLPKYRKYWSAHVNYDQVFLRECNINP* 347
WLEIG+P+YR +WS HV+Y+ V+LRECNINP*
Sbjct: 248 WLEIGIPRYRGFWSKHVDYEHVYLRECNINP* 153
Score = 118 bits (253), Expect = 1e-025
Identities = 56/87 (64%), Positives = 58/87 (66%)
Frame = -1 / +1
Query: 343 GFMLHSRRNT*S*LTCADQYLRYFGNPISSQGFRFPL*WMTAARLISLTLTFGLYPSPN* 164
G MLHS R T S* TC DQ Y G PISS G R PL* +TAA ISL T GLYPSP+
Sbjct: 157 GLMLHSLR*TCS*STCFDQKPLYLGIPISSHGLRLPL*CITAALSISLWFTLGLYPSPSM 336
Query: 163 CHERSRGNVRFQKVTRPAGRVPSFHNS 83
CH RS G VR Q V RP G VPSFHNS
Sbjct: 337 CHFRSSGYVRLQNVIRPGGNVPSFHNS 417
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 193 bits (417), Expect = 3e-048
Identities = 70/92 (76%), Positives = 82/92 (89%)
Frame = +3 / +3
Query: 72 NENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGYNPNVNVKDIRRAAVIHYNGNLKP 251
N++R LWKLGTLP GL+TFW RT+PLDR WH LGLGYNP+VN +DI RAAVIHYNGNLKP
Sbjct: 17490369 NQDRELWKLGTLPPGLITFWRRTYPLDRKWHILGLGYNPSVNQRDIERAAVIHYNGNLKP 17490548
Query: 252 WLEIGLPKYRKYWSAHVNYDQVFLRECNINP* 347
WLEIG+P+YR +WS HV+Y+ V+LRECNINP*
Sbjct: 17490549 WLEIGIPRYRGFWSKHVDYEHVYLRECNINP* 17490644
Score = 127 bits (273), Expect = 2e-028
Identities = 45/92 (48%), Positives = 60/92 (65%)
Frame = +3 / -1
Query: 63 QKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGYNPNVNVKDIRRAAVIHYNGN 242
Q L N +WKLGTLP L+ F +D SWH LGLGY N++++++AAVIHYNG
Sbjct: 4804693 QNLKSNLTMWKLGTLPPALIAFKGHVHIIDSSWHMLGLGYQSKTNIENVKKAAVIHYNGQ 4804514
Query: 243 LKPWLEIGLPKYRKYWSAHVNYDQVFLRECNI 338
KPWLEIG R +W+ +VNY F++ C+I
Sbjct: 4804513 SKPWLEIGFEHLRPFWTKYVNYSNDFIKNCHI 4804418
Score = 118 bits (253), Expect = 1e-025
Identities = 56/87 (64%), Positives = 58/87 (66%)
Frame = -1 / -1
Query: 343 GFMLHSRRNT*S*LTCADQYLRYFGNPISSQGFRFPL*WMTAARLISLTLTFGLYPSPN* 164
G MLHS R T S* TC DQ Y G PISS G R PL* +TAA ISL T GLYPSP+
Sbjct: 17490640 GLMLHSLR*TCS*STCFDQKPLYLGIPISSHGLRLPL*CITAALSISLWFTLGLYPSPSM 17490461
Query: 163 CHERSRGNVRFQKVTRPAGRVPSFHNS 83
CH RS G VR Q V RP G VPSFHNS
Sbjct: 17490460 CHFRSSGYVRLQNVIRPGGNVPSFHNS 17490380
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 193 bits (417), Expect = 3e-048
Identities = 70/92 (76%), Positives = 82/92 (89%)
Frame = +3 / +2
Query: 72 NENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGYNPNVNVKDIRRAAVIHYNGNLKP 251
N++R LWKLGTLP GL+TFW RT+PLDR WH LGLGYNP+VN +DI RAAVIHYNGNLKP
Sbjct: 19367468 NQDRELWKLGTLPPGLITFWRRTYPLDRKWHILGLGYNPSVNQRDIERAAVIHYNGNLKP 19367647
Query: 252 WLEIGLPKYRKYWSAHVNYDQVFLRECNINP* 347
WLEIG+P+YR +WS HV+Y+ V+LRECNINP*
Sbjct: 19367648 WLEIGIPRYRGFWSKHVDYEHVYLRECNINP* 19367743
Score = 127 bits (273), Expect = 2e-028
Identities = 45/92 (48%), Positives = 60/92 (65%)
Frame = +3 / -2
Query: 63 QKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGYNPNVNVKDIRRAAVIHYNGN 242
Q L N +WKLGTLP L+ F +D SWH LGLGY N++++++AAVIHYNG
Sbjct: 5021720 QNLKSNLTMWKLGTLPPALIAFKGHVHIIDSSWHMLGLGYQSKTNIENVKKAAVIHYNGQ 5021541
Query: 243 LKPWLEIGLPKYRKYWSAHVNYDQVFLRECNI 338
KPWLEIG R +W+ +VNY F++ C+I
Sbjct: 5021540 SKPWLEIGFEHLRPFWTKYVNYSNDFIKNCHI 5021445
Score = 118 bits (253), Expect = 1e-025
Identities = 56/87 (64%), Positives = 58/87 (66%)
Frame = -1 / -1
Query: 343 GFMLHSRRNT*S*LTCADQYLRYFGNPISSQGFRFPL*WMTAARLISLTLTFGLYPSPN* 164
G MLHS R T S* TC DQ Y G PISS G R PL* +TAA ISL T GLYPSP+
Sbjct: 19367739 GLMLHSLR*TCS*STCFDQKPLYLGIPISSHGLRLPL*CITAALSISLWFTLGLYPSPSM 19367560
Query: 163 CHERSRGNVRFQKVTRPAGRVPSFHNS 83
CH RS G VR Q V RP G VPSFHNS
Sbjct: 19367559 CHFRSSGYVRLQNVIRPGGNVPSFHNS 19367479
Score = 105 bits (224), Expect = 1e-021
Identities = 38/92 (41%), Positives = 53/92 (57%)
Frame = +3 / -1
Query: 63 QKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGYNPNVNVKDIRRAAVIHYNGN 242
Q L + LW+LGTLP GL+ F +D WH LGLGY + D AAV+H+NG
Sbjct: 22236948 QNLKSDLSLWQLGTLPPGLIAFHGHVQTIDPFWHMLGLGYQETTSYADAESAAVVHFNGR 22236769
Query: 243 LKPWLEIGLPKYRKYWSAHVNYDQVFLRECNI 338
KPWL+I P R W+ +++ F++ C+I
Sbjct: 22236768 AKPWLDIAFPHLRPLWAKYLDSSDRFIKSCHI 22236673
>gb|AV559969.1|AV559969 AV559969 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ126g06F 3', mRNA sequence
Length = 561
Score = 192 bits (413), Expect = 1e-047
Identities = 68/116 (58%), Positives = 90/116 (77%)
Frame = +3 / -1
Query: 3 NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
N FDL WR++ TE YH WQ LNENR LWKLGTLP GL+TF++ T PLD+SWH LGLGY
Sbjct: 531 NFFDLDAWRREKCTEEYHYWQNLNENRALWKLGTLPPGLITFYSTTKPLDKSWHVLGLGY 352
Query: 183 NPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNINP*T 350
NP++++ +IR AAV+H+NGN+KPWL+I + ++R W+ HV+YD F++ CN *T
Sbjct: 351 NPSISMDEIRNAAVVHFNGNMKPWLDIAMNQFRPLWTKHVDYDLEFVQACNFGL*T 184
>gb|AY099574.1| Arabidopsis thaliana glycosyl transferase, putative (At3g25140) mRNA,
complete cds
Length = 1918
Score = 192 bits (413), Expect = 1e-047
Identities = 68/116 (58%), Positives = 90/116 (77%)
Frame = +3 / +2
Query: 3 NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
N FDL WR++ TE YH WQ LNENR LWKLGTLP GL+TF++ T PLD+SWH LGLGY
Sbjct: 1373 NFFDLDAWRREKCTEEYHYWQNLNENRALWKLGTLPPGLITFYSTTKPLDKSWHVLGLGY 1552
Query: 183 NPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNINP*T 350
NP++++ +IR AAV+H+NGN+KPWL+I + ++R W+ HV+YD F++ CN *T
Sbjct: 1553 NPSISMDEIRNAAVVHFNGNMKPWLDIAMNQFRPLWTKHVDYDLEFVQACNFGL*T 1720
>emb|BX823546.1|CNS0A4R3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS4ZE12 of Adult vegetative tissue of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1873
Score = 192 bits (413), Expect = 1e-047
Identities = 68/116 (58%), Positives = 90/116 (77%)
Frame = +3 / +2
Query: 3 NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
N FDL WR++ TE YH WQ LNENR LWKLGTLP GL+TF++ T PLD+SWH LGLGY
Sbjct: 1361 NFFDLDAWRREKCTEEYHYWQNLNENRALWKLGTLPPGLITFYSTTKPLDKSWHVLGLGY 1540
Query: 183 NPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNINP*T 350
NP++++ +IR AAV+H+NGN+KPWL+I + ++R W+ HV+YD F++ CN *T
Sbjct: 1541 NPSISMDEIRNAAVVHFNGNMKPWLDIAMNQFRPLWTKHVDYDLEFVQACNFGL*T 1708
>ref|NM_113418.3| Arabidopsis thaliana QUA1 (QUASIMODO1); transferase, transferring
glycosyl groups / transferase, transferring hexosyl
groups AT3G25140 (QUA1) mRNA, complete cds
Length = 1919
Score = 192 bits (413), Expect = 1e-047
Identities = 68/116 (58%), Positives = 90/116 (77%)
Frame = +3 / +2
Query: 3 NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
N FDL WR++ TE YH WQ LNENR LWKLGTLP GL+TF++ T PLD+SWH LGLGY
Sbjct: 1373 NFFDLDAWRREKCTEEYHYWQNLNENRALWKLGTLPPGLITFYSTTKPLDKSWHVLGLGY 1552
Query: 183 NPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNINP*T 350
NP++++ +IR AAV+H+NGN+KPWL+I + ++R W+ HV+YD F++ CN *T
Sbjct: 1553 NPSISMDEIRNAAVVHFNGNMKPWLDIAMNQFRPLWTKHVDYDLEFVQACNFGL*T 1720
>gb|BX834173.1|BX834173 BX834173 Arabidopsis thaliana Adult vegetative tissue Col-0
Arabidopsis thaliana cDNA clone GSLTLS72ZB06 3PRIM, mRNA
sequence
Length = 653
Score = 191 bits (412), Expect = 1e-047
Identities = 69/113 (61%), Positives = 86/113 (76%)
Frame = +3 / -1
Query: 3 NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
NMFDL +WRK+NIT +YH WQ LNE+R LWKLG+LP GL+T +N T+ +DRSWH LGLGY
Sbjct: 461 NMFDLKEWRKRNITGIYHYWQDLNEDRTLWKLGSLPPGLITSYNLTYAMDRSWHVLGLGY 282
Query: 183 NPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNIN 341
+P +N I AAV+HYNGN KPWL + KY+ YWS +V YD +LR C+IN
Sbjct: 281 DPALNQTAIENAAVVHYNGNYKPWLGLAFAKYKPYWSKYVEYDNPYLRRCDIN 123
>gb|AI996052.1|AI996052 701549776 A. thaliana, Columbia Col-0, inflorescence-2 Arabidopsis
thaliana cDNA clone 701549776, mRNA sequence
Length = 605
Score = 190 bits (410), Expect = 3e-047
Identities = 68/111 (61%), Positives = 85/111 (76%)
Frame = +3 / -3
Query: 3 NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
NMFDL +WRK+NIT +YH WQ LNE+R LWKLG+LP GL+TF+N T+ +DRSWH LGLGY
Sbjct: 471 NMFDLKEWRKRNITGIYHYWQDLNEDRTLWKLGSLPPGLITFYNLTYAMDRSWHVLGLGY 292
Query: 183 NPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECN 335
+P +N I AAV+HYNGN KPWL + KY+ YWS +V YD +LR C+
Sbjct: 291 DPALNQTAIENAAVVHYNGNYKPWLGLAFAKYKPYWSKYVEYDNPYLRRCD 139
>gb|BT010393.1| Arabidopsis thaliana At3g25140 mRNA, complete cds
Length = 1680
Score = 190 bits (410), Expect = 3e-047
Identities = 66/111 (59%), Positives = 88/111 (79%)
Frame = +3 / +1
Query: 3 NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
N FDL WR++ TE YH WQ LNENR LWKLGTLP GL+TF++ T PLD+SWH LGLGY
Sbjct: 1336 NFFDLDAWRREKCTEEYHYWQNLNENRALWKLGTLPPGLITFYSTTKPLDKSWHVLGLGY 1515
Query: 183 NPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECN 335
NP++++ +IR AAV+H+NGN+KPWL+I + ++R W+ HV+YD F++ CN
Sbjct: 1516 NPSISMDEIRNAAVVHFNGNMKPWLDIAMNQFRPLWTKHVDYDLEFVQACN 1668
>ref|NM_130212.2| Arabidopsis thaliana transferase, transferring glycosyl groups
AT2G46480 mRNA, complete cds
Length = 1587
Score = 189 bits (408), Expect = 5e-047
Identities = 66/112 (58%), Positives = 86/112 (76%)
Frame = +3 / +1
Query: 3 NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
N+FDL +W+K NITE YH WQ LNENR LWKLGTLP GL+TF+N T PL R WH LGLGY
Sbjct: 1243 NIFDLKEWKKNNITETYHFWQNLNENRTLWKLGTLPPGLITFYNLTQPLQRKWHLLGLGY 1422
Query: 183 NPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNI 338
+ ++VK I R+AVIHYNG++KPW E+G+ KY+ YW+ + N+D ++ C +
Sbjct: 1423 DKGIDVKKIERSAVIHYNGHMKPWTEMGISKYQPYWTKYTNFDHPYIFTCRL 1578
>emb|AL137898.1|ATT20K12 Arabidopsis thaliana DNA chromosome 3, BAC clone T20K12
Length = 109155
Score = 160 bits (345), Expect(2) = 2e-046
Identities = 54/90 (60%), Positives = 73/90 (81%)
Frame = +3 / +3
Query: 72 NENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGYNPNVNVKDIRRAAVIHYNGNLKP 251
NENR LWKLGTLP GL+TF+ T PL+++WH LGLGYNP+++ KDI AAV+HYNGN+KP
Sbjct: 13374 NENRTLWKLGTLPPGLITFYGLTHPLNKAWHVLGLGYNPSIDKKDIENAAVVHYNGNMKP 13553
Query: 252 WLEIGLPKYRKYWSAHVNYDQVFLRECNIN 341
WLE+ + KYR YW+ ++ +D +LR CN++
Sbjct: 13554 WLELAMSKYRPYWTKYIKFDHPYLRRCNLH 13643
Score = 47.3 bits (97), Expect(2) = 2e-046
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = +3 / +2
Query: 3 NMFDLGDWRKQNITEVYHTWQKLNENRLL 89
NMFDL +W+K++IT +YH WQ + N L+
Sbjct: 13211 NMFDLKEWKKRDITGIYHKWQNMVNNSLI 13297
>emb|AJ243015.1|ATH243015 Arabidopsis thaliana LGT1 gene, and partial FUSCA6 gene
Length = 5000
Score = 160 bits (345), Expect(2) = 2e-046
Identities = 54/90 (60%), Positives = 73/90 (81%)
Frame = +3 / +1
Query: 72 NENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGYNPNVNVKDIRRAAVIHYNGNLKP 251
NENR LWKLGTLP GL+TF+ T PL+++WH LGLGYNP+++ KDI AAV+HYNGN+KP
Sbjct: 3469 NENRTLWKLGTLPPGLITFYGLTHPLNKAWHVLGLGYNPSIDKKDIENAAVVHYNGNMKP 3648
Query: 252 WLEIGLPKYRKYWSAHVNYDQVFLRECNIN 341
WLE+ + KYR YW+ ++ +D +LR CN++
Sbjct: 3649 WLELAMSKYRPYWTKYIKFDHPYLRRCNLH 3738
Score = 47.3 bits (97), Expect(2) = 2e-046
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = +3 / +3
Query: 3 NMFDLGDWRKQNITEVYHTWQKLNENRLL 89
NMFDL +W+K++IT +YH WQ + N L+
Sbjct: 3306 NMFDLKEWKKRDITGIYHKWQNMVNNSLI 3392
>gb|AV559980.1|AV559980 AV559980 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ127a08F 3', mRNA sequence
Length = 523
Score = 186 bits (401), Expect = 5e-046
Identities = 66/113 (58%), Positives = 88/113 (77%)
Frame = +3 / -2
Query: 12 DLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGYNPN 191
DL WR++ TE YH WQ LNENR LWKLGTLP GL+TF++ T PLD+SWH LGLGYNP+
Sbjct: 522 DLDAWRREKCTEEYHYWQNLNENRALWKLGTLPPGLITFYSTTKPLDKSWHVLGLGYNPS 343
Query: 192 VNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNINP*T 350
+++ +IR AAV+H+NGN+KPWL+I + ++R W+ HV+YD F++ CN *T
Sbjct: 342 ISMDEIRNAAVVHFNGNMKPWLDIAMNQFRPLWTKHVDYDLEFVQACNFGL*T 184
>gb|AY039515.1| Arabidopsis thaliana AT3g61130/T20K12_30 mRNA, complete cds
Length = 2542
Score = 112 bits (240), Expect(2) = 8e-046
Identities = 36/65 (55%), Positives = 51/65 (78%)
Frame = +3 / +1
Query: 147 LDRSWHQLGLGYNPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLR 326
L + WH LGLGYNP+++ KDI AAV+HYNGN+KPWLE+ + KYR YW+ ++ +D +LR
Sbjct: 2143 LKQGWHVLGLGYNPSIDKKDIENAAVVHYNGNMKPWLELAMSKYRPYWTKYIKFDHPYLR 2322
Query: 327 ECNIN 341
CN++
Sbjct: 2323 RCNLH 2337
Score = 93.2 bits (197), Expect(2) = 8e-046
Identities = 32/51 (62%), Positives = 42/51 (82%)
Frame = +3 / +2
Query: 3 NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDR 155
NMFDL +W+K++IT +YH WQ +NENR LWKLGTLP GL+TF+ T PL++
Sbjct: 2000 NMFDLKEWKKRDITGIYHKWQNMNENRTLWKLGTLPPGLITFYGLTHPLNK 2152
>gb|BP602123.1|BP602123 BP602123 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-53-H13 3',
mRNA sequence
Length = 420
Score = 175 bits (376), Expect(2) = 8e-046
Identities = 63/82 (76%), Positives = 73/82 (89%)
Frame = +3 / -2
Query: 102 TLPAGLVTFWNRTFPLDRSWHQLGLGYNPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYR 281
TLP GL+TFW RT+PLDR WH LGLGYNP+VN +DI RAAVIHYNGNLKPWLEIG+P+YR
Sbjct: 368 TLPPGLITFWRRTYPLDRKWHILGLGYNPSVNQRDIERAAVIHYNGNLKPWLEIGIPRYR 189
Query: 282 KYWSAHVNYDQVFLRECNINP* 347
+WS HV+Y+ V+LRECNINP*
Sbjct: 188 GFWSKHVDYEHVYLRECNINP* 123
Score = 102 bits (218), Expect = 8e-021
Identities = 50/81 (61%), Positives = 52/81 (64%)
Frame = -1 / +1
Query: 343 GFMLHSRRNT*S*LTCADQYLRYFGNPISSQGFRFPL*WMTAARLISLTLTFGLYPSPN* 164
G MLHS R T S* TC DQ Y G PISS G R PL* +TAA ISL T GLYPSP+
Sbjct: 127 GLMLHSLR*TCS*STCFDQKPLYLGIPISSHGLRLPL*CITAALSISLWFTLGLYPSPSM 306
Query: 163 CHERSRGNVRFQKVTRPAGRV 101
CH RS G VR Q V RP G V
Sbjct: 307 CHFRSSGYVRLQNVIRPGGNV 369
Score = 30.9 bits (61), Expect(2) = 8e-046
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3 / -3
Query: 51 YHTWQKLNENRLLWKLG 101
YH Q LN++R LWKLG
Sbjct: 418 YHRCQDLNQDRELWKLG 368
>emb|BX826627.1|CNS0A3BD Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB49ZD01 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 2132
Score = 184 bits (396), Expect = 2e-045
Identities = 67/113 (59%), Positives = 83/113 (73%)
Frame = +3 / +2
Query: 3 NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
NMFDL +WRK+NIT +YH WQ LNE+R LWKLG+LP G +TF+N T+ +DRSW++LG G
Sbjct: 1697 NMFDLKEWRKRNITGIYHYWQDLNEDRTLWKLGSLPPGRITFYNLTYAMDRSWNELGRGD 1876
Query: 183 NPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNIN 341
P VN I AAV+HYNGN KPWL + KY+ YWS +V YD +LR C IN
Sbjct: 1877 GPGVNQTAIENAAVVHYNGNYKPWLGLAFAKYKPYWSKYVEYDNPYLRRCYIN 2035
>gb|AV553351.1|AV553351 AV553351 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ60d09R 5', mRNA sequence
Length = 566
Score = 179 bits (386), Expect = 5e-044
Identities = 64/118 (54%), Positives = 88/118 (74%)
Frame = +3 / +2
Query: 3 NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
N+FDL WR++ T+ YH WQ LNE+R LWKLGTLP GL+TF+++T LD+SWH LGLGY
Sbjct: 149 NIFDLNAWRREKCTDQYHYWQNLNEDRTLWKLGTLPPGLITFYSKTKSLDKSWHVLGLGY 328
Query: 183 NPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNINP*TAN 356
NP V++ +IR A VIHYNGN+KPWL+I + +Y+ W+ +V+ + F++ CN * N
Sbjct: 329 NPGVSMDEIRNAGVIHYNGNMKPWLDIAMNQYKSLWTKYVDNEMEFVQMCNFGL*REN 502
>gb|AY078957.1| Arabidopsis thaliana AT3g02350/F11A12_103 mRNA, complete cds
Length = 2093
Score = 179 bits (386), Expect = 5e-044
Identities = 64/118 (54%), Positives = 88/118 (74%)
Frame = +3 / +1
Query: 3 NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
N+FDL WR++ T+ YH WQ LNE+R LWKLGTLP GL+TF+++T LD+SWH LGLGY
Sbjct: 1504 NIFDLNAWRREKCTDQYHYWQNLNEDRTLWKLGTLPPGLITFYSKTKSLDKSWHVLGLGY 1683
Query: 183 NPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNINP*TAN 356
NP V++ +IR A VIHYNGN+KPWL+I + +Y+ W+ +V+ + F++ CN * N
Sbjct: 1684 NPGVSMDEIRNAGVIHYNGNMKPWLDIAMNQYKSLWTKYVDNEMEFVQMCNFGL*REN 1857
>gb|AY084528.1| Arabidopsis thaliana clone 110819 mRNA, complete sequence
Length = 2224
Score = 179 bits (386), Expect = 5e-044
Identities = 64/118 (54%), Positives = 88/118 (74%)
Frame = +3 / +3
Query: 3 NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
N+FDL WR++ T+ YH WQ LNE+R LWKLGTLP GL+TF+++T LD+SWH LGLGY
Sbjct: 1584 NIFDLNAWRREKCTDQYHYWQNLNEDRTLWKLGTLPPGLITFYSKTKSLDKSWHVLGLGY 1763
Query: 183 NPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNINP*TAN 356
NP V++ +IR A VIHYNGN+KPWL+I + +Y+ W+ +V+ + F++ CN * N
Sbjct: 1764 NPGVSMDEIRNAGVIHYNGNMKPWLDIAMNQYKSLWTKYVDNEMEFVQMCNFGL*REN 1937
>emb|BX826005.1|CNS0A7K4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL78ZH04 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 660
Score = 179 bits (386), Expect = 5e-044
Identities = 64/118 (54%), Positives = 88/118 (74%)
Frame = +3 / +2
Query: 3 NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
N+FDL WR++ T+ YH WQ LNE+R LWKLGTLP GL+TF+++T LD+SWH LGLGY
Sbjct: 65 NIFDLNAWRREKCTDQYHYWQNLNEDRTLWKLGTLPPGLITFYSKTKSLDKSWHVLGLGY 244
Query: 183 NPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNINP*TAN 356
NP V++ +IR A VIHYNGN+KPWL+I + +Y+ W+ +V+ + F++ CN * N
Sbjct: 245 NPGVSMDEIRNAGVIHYNGNMKPWLDIAMNQYKSLWTKYVDNEMEFVQMCNFGL*REN 418
>dbj|AK221962.1| Arabidopsis thaliana mRNA for hypothetical protein, partial cds,
clone: RAFL22-54-G04
Length = 929
Score = 179 bits (386), Expect = 5e-044
Identities = 64/118 (54%), Positives = 88/118 (74%)
Frame = +3 / +1
Query: 3 NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
N+FDL WR++ T+ YH WQ LNE+R LWKLGTLP GL+TF+++T LD+SWH LGLGY
Sbjct: 349 NIFDLNAWRREKCTDQYHYWQNLNEDRTLWKLGTLPPGLITFYSKTKSLDKSWHVLGLGY 528
Query: 183 NPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNINP*TAN 356
NP V++ +IR A VIHYNGN+KPWL+I + +Y+ W+ +V+ + F++ CN * N
Sbjct: 529 NPGVSMDEIRNAGVIHYNGNMKPWLDIAMNQYKSLWTKYVDNEMEFVQMCNFGL*REN 702
>ref|NM_111102.1| Arabidopsis thaliana transferase, transferring glycosyl groups /
transferase, transferring hexosyl groups AT3G02350 mRNA,
complete cds
Length = 2224
Score = 179 bits (386), Expect = 5e-044
Identities = 64/118 (54%), Positives = 88/118 (74%)
Frame = +3 / +3
Query: 3 NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
N+FDL WR++ T+ YH WQ LNE+R LWKLGTLP GL+TF+++T LD+SWH LGLGY
Sbjct: 1584 NIFDLNAWRREKCTDQYHYWQNLNEDRTLWKLGTLPPGLITFYSKTKSLDKSWHVLGLGY 1763
Query: 183 NPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNINP*TAN 356
NP V++ +IR A VIHYNGN+KPWL+I + +Y+ W+ +V+ + F++ CN * N
Sbjct: 1764 NPGVSMDEIRNAGVIHYNGNMKPWLDIAMNQYKSLWTKYVDNEMEFVQMCNFGL*REN 1937
>gb|BT004530.1| Arabidopsis thaliana At3g02350/F11A12_103 gene, complete cds
Length = 1686
Score = 178 bits (384), Expect = 1e-043
Identities = 62/111 (55%), Positives = 86/111 (77%)
Frame = +3 / +1
Query: 3 NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
N+FDL WR++ T+ YH WQ LNE+R LWKLGTLP GL+TF+++T LD+SWH LGLGY
Sbjct: 1342 NIFDLNAWRREKCTDQYHYWQNLNEDRTLWKLGTLPPGLITFYSKTKSLDKSWHVLGLGY 1521
Query: 183 NPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECN 335
NP V++ +IR A VIHYNGN+KPWL+I + +Y+ W+ +V+ + F++ CN
Sbjct: 1522 NPGVSMDEIRNAGVIHYNGNMKPWLDIAMNQYKSLWTKYVDNEMEFVQMCN 1674
>emb|BX823985.1|CNS0A7D9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH12ZD07 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 2016
Score = 178 bits (384), Expect = 1e-043
Identities = 62/111 (55%), Positives = 86/111 (77%)
Frame = +3 / +3
Query: 3 NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
N+FDL WR++ T+ YH WQ LNE+R LWKLGTLP GL+TF+++T LD+SWH LGLGY
Sbjct: 1446 NIFDLNAWRREKCTDQYHYWQNLNEDRTLWKLGTLPPGLITFYSKTKSLDKSWHVLGLGY 1625
Query: 183 NPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECN 335
NP V++ +IR A VIHYNGN+KPWL+I + +Y+ W+ +V+ + F++ CN
Sbjct: 1626 NPGVSMDEIRNAGVIHYNGNMKPWLDIAMNQYKSLWTKYVDNEMEFVQMCN 1778
>emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long arm
Length = 14497843
Score = 150 bits (323), Expect(2) = 2e-043
Identities = 54/90 (60%), Positives = 68/90 (75%)
Frame = +3 / +3
Query: 72 NENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGYNPNVNVKDIRRAAVIHYNGNLKP 251
NE+R LWKLG+LP GL+TF+N T+ +DRSWH LGLGY+P +N I AAV+HYNGN KP
Sbjct: 13853925 NEDRTLWKLGSLPPGLITFYNLTYAMDRSWHVLGLGYDPALNQTAIENAAVVHYNGNYKP 13854104
Query: 252 WLEIGLPKYRKYWSAHVNYDQVFLRECNIN 341
WL + KY+ YWS +V YD +LR C+IN
Sbjct: 13854105 WLGLAFAKYKPYWSKYVEYDNPYLRRCDIN 13854194
Score = 47.3 bits (97), Expect(2) = 2e-043
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +3 / +2
Query: 3 NMFDLGDWRKQNITEVYHTWQKL 71
NMFDL +WRK+NIT +YH WQ L
Sbjct: 13853768 NMFDLKEWRKRNITGIYHYWQDL 13853836
>emb|AL161593.2|ATCHRIV89 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 89
Length = 199789
Score = 150 bits (323), Expect(2) = 2e-043
Identities = 54/90 (60%), Positives = 68/90 (75%)
Frame = +3 / +3
Query: 72 NENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGYNPNVNVKDIRRAAVIHYNGNLKP 251
NE+R LWKLG+LP GL+TF+N T+ +DRSWH LGLGY+P +N I AAV+HYNGN KP
Sbjct: 50076 NEDRTLWKLGSLPPGLITFYNLTYAMDRSWHVLGLGYDPALNQTAIENAAVVHYNGNYKP 50255
Query: 252 WLEIGLPKYRKYWSAHVNYDQVFLRECNIN 341
WL + KY+ YWS +V YD +LR C+IN
Sbjct: 50256 WLGLAFAKYKPYWSKYVEYDNPYLRRCDIN 50345
Score = 47.3 bits (97), Expect(2) = 2e-043
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +3 / +2
Query: 3 NMFDLGDWRKQNITEVYHTWQKL 71
NMFDL +WRK+NIT +YH WQ L
Sbjct: 49919 NMFDLKEWRKRNITGIYHYWQDL 49987
>emb|AL035538.1|ATF20D10 Arabidopsis thaliana DNA chromosome 4, BAC clone F20D10 (ESSA project)
Length = 147215
Score = 150 bits (323), Expect(2) = 2e-043
Identities = 54/90 (60%), Positives = 68/90 (75%)
Frame = +3 / +3
Query: 72 NENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGYNPNVNVKDIRRAAVIHYNGNLKP 251
NE+R LWKLG+LP GL+TF+N T+ +DRSWH LGLGY+P +N I AAV+HYNGN KP
Sbjct: 129153 NEDRTLWKLGSLPPGLITFYNLTYAMDRSWHVLGLGYDPALNQTAIENAAVVHYNGNYKP 129332
Query: 252 WLEIGLPKYRKYWSAHVNYDQVFLRECNIN 341
WL + KY+ YWS +V YD +LR C+IN
Sbjct: 129333 WLGLAFAKYKPYWSKYVEYDNPYLRRCDIN 129422
Score = 47.3 bits (97), Expect(2) = 2e-043
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +3 / +2
Query: 3 NMFDLGDWRKQNITEVYHTWQKL 71
NMFDL +WRK+NIT +YH WQ L
Sbjct: 128996 NMFDLKEWRKRNITGIYHYWQDL 129064
>emb|AL035539.1|ATF22I13 Arabidopsis thaliana DNA chromosome 4, BAC clone F22I13 (ESSA
project)
Length = 93760
Score = 150 bits (323), Expect(2) = 2e-043
Identities = 54/90 (60%), Positives = 68/90 (75%)
Frame = +3 / +2
Query: 72 NENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGYNPNVNVKDIRRAAVIHYNGNLKP 251
NE+R LWKLG+LP GL+TF+N T+ +DRSWH LGLGY+P +N I AAV+HYNGN KP
Sbjct: 9119 NEDRTLWKLGSLPPGLITFYNLTYAMDRSWHVLGLGYDPALNQTAIENAAVVHYNGNYKP 9298
Query: 252 WLEIGLPKYRKYWSAHVNYDQVFLRECNIN 341
WL + KY+ YWS +V YD +LR C+IN
Sbjct: 9299 WLGLAFAKYKPYWSKYVEYDNPYLRRCDIN 9388
Score = 47.3 bits (97), Expect(2) = 2e-043
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +3 / +1
Query: 3 NMFDLGDWRKQNITEVYHTWQKL 71
NMFDL +WRK+NIT +YH WQ L
Sbjct: 8962 NMFDLKEWRKRNITGIYHYWQDL 9030
>dbj|AB026647.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MJL12
Length = 81542
Score = 155 bits (334), Expect(2) = 2e-042
Identities = 55/93 (59%), Positives = 75/93 (80%)
Frame = +3 / +2
Query: 72 NENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGYNPNVNVKDIRRAAVIHYNGNLKP 251
NENR LWKLGTLP GL+TF++ T PLD+SWH LGLGYNP++++ +IR AAV+H+NGN+KP
Sbjct: 25397 NENRALWKLGTLPPGLITFYSTTKPLDKSWHVLGLGYNPSISMDEIRNAAVVHFNGNMKP 25576
Query: 252 WLEIGLPKYRKYWSAHVNYDQVFLRECNINP*T 350
WL+I + ++R W+ HV+YD F++ CN *T
Sbjct: 25577 WLDIAMNQFRPLWTKHVDYDLEFVQACNFGL*T 25675
Score = 39.1 bits (79), Expect(2) = 2e-042
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +3 / +1
Query: 3 NMFDLGDWRKQNITEVYHTWQKL 71
N FDL WR++ TE YH WQ L
Sbjct: 25237 NFFDLDAWRREKCTEEYHYWQNL 25305
>gb|AC006526.8| Arabidopsis thaliana chromosome 2 clone F11C10 map CIC02E07, complete
sequence
Length = 95214
Score = 146 bits (314), Expect(2) = 7e-042
Identities = 51/89 (57%), Positives = 68/89 (76%)
Frame = +3 / -3
Query: 72 NENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGYNPNVNVKDIRRAAVIHYNGNLKP 251
NENR LWKLGTLP GL+TF+N T PL R WH LGLGY+ ++VK I R+AVIHYNG++KP
Sbjct: 60385 NENRTLWKLGTLPPGLITFYNLTQPLQRKWHLLGLGYDKGIDVKKIERSAVIHYNGHMKP 60206
Query: 252 WLEIGLPKYRKYWSAHVNYDQVFLRECNI 338
W E+G+ KY+ YW+ + N+D ++ C +
Sbjct: 60205 WTEMGISKYQPYWTKYTNFDHPYIFTCRL 60119
Score = 46.0 bits (94), Expect(2) = 7e-042
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +3 / -1
Query: 3 NMFDLGDWRKQNITEVYHTWQKL 71
N+FDL +W+K NITE YH WQ L
Sbjct: 60540 NIFDLKEWKKNNITETYHFWQNL 60472
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,284,232,627
Number of Sequences: 1013581
Number of extensions: 17949743
Number of successful extensions: 176662
Number of sequences better than 1.0e-020: 167
length of database: 302,980,290
effective HSP length: 55
effective length of database: 247,233,335
effective search space used: 35107133570
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)