TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3054736.2.1
(725 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
emb|BX820892.1|CNS0A83O Arabidopsis thaliana Full-length cD... 196 5e-049
emb|BX818880.1|CNS0A9Q5 Arabidopsis thaliana Full-length cD... 196 5e-049
gb|BT015330.1| Arabidopsis thaliana At2g26100 gene, complet... 196 5e-049
gb|BT015706.1| Arabidopsis thaliana At2g26100 gene, complet... 196 5e-049
ref|NM_128168.3| Arabidopsis thaliana transferase, transfer... 196 5e-049
gb|AY128376.1| Arabidopsis thaliana unknown protein (At1g53... 176 6e-043
gb|BT008831.1| Arabidopsis thaliana At1g53290 mRNA, complet... 176 6e-043
emb|BX818399.1|CNS0AAJ6 Arabidopsis thaliana Full-length cD... 176 6e-043
ref|NM_104207.2| Arabidopsis thaliana transferase, transfer... 176 6e-043
gb|AY070398.1| Arabidopsis thaliana putative galactosyltran... 173 4e-042
gb|AY133728.1| Arabidopsis thaliana clone U19626 putative g... 173 4e-042
emb|BX824144.1|CNS0A6RK Arabidopsis thaliana Full-length cD... 173 4e-042
ref|NM_112358.3| Arabidopsis thaliana transferase, transfer... 173 4e-042
emb|BX823512.1|CNS0A6KQ Arabidopsis thaliana Full-length cD... 173 4e-042
emb|BX818271.1|CNS0AEK9 Arabidopsis thaliana Full-length cD... 171 3e-041
gb|AC004747.3| Arabidopsis thaliana chromosome 2 clone T19L... 99 9e-038
gb|BP596219.1|BP596219 BP596219 RAFL15 Arabidopsis thaliana... 157 4e-037
gb|AV820584.1|AV820584 AV820584 RAFL11 Arabidopsis thaliana... 134 2e-030
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 89 1e-029
gb|AC008007.7|AC008007 Genomic sequence for Arabidopsis tha... 89 1e-029
gb|AV818851.1|AV818851 AV818851 RAFL11 Arabidopsis thaliana... 132 2e-029
dbj|AP000370.1| Arabidopsis thaliana genomic DNA, chromosom... 86 1e-028
emb|AL953547.1| Arabidopsis thaliana T-DNA flanking sequenc... 89 4e-028
gb|AI995369.1|AI995369 701673573 A. thaliana, Columbia Col-... 119 8e-026
>emb|BX820892.1|CNS0A83O Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH79ZF09 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1502
Score = 196 bits (423), Expect = 5e-049
Identities = 74/118 (62%), Positives = 93/118 (78%)
Frame = +3 / +2
Query: 3 VVNDPNLKWYESSWELLGNEYFMHASGSLYALSSEVVEALATAKSDSLRMFDYEDVTIGA 182
V+ DP LKWYE L+GNEYF+HA G +Y LS+E+V +LA A++ SLRMF+ EDVTIG+
Sbjct: 818 VITDPKLKWYEKQGNLIGNEYFLHAYGPIYVLSAEIVASLAAARNGSLRMFNNEDVTIGS 997
Query: 183 WMLAMNVKHEDNRAMCDSVCTPTSIAVWDSKKCSGTCNVADKIKQLHNTTVCSKSPTL 356
WMLAM+V HEDNRA+CD C+P SIAVWD KCSG C+ ++K+LH T +CSKSPTL
Sbjct: 998 WMLAMDVHHEDNRALCDPHCSPKSIAVWDIPKCSGLCDPESRLKELHKTDMCSKSPTL 1171
Score = 123 bits (263), Expect = 6e-027
Identities = 64/120 (53%), Positives = 70/120 (58%)
Frame = -2 / -3
Query: 361 GGNVGLFEHTVVLWSCFILSATLQVPEHFLLSHTAMEVGVHTESHIARLSSCFTFIASIH 182
GGNVGL EH VL S F + Q PEH +S TAM+ G SH ARLSS T IASI
Sbjct: 1176 GGNVGLLEHISVL*SSFNRLSGSQSPEHLGMSQTAMDFGEQCGSHKARLSS*CTSIASIQ 997
Query: 181 APIVTSS*SNILKLSLFAVARASTTSEERAYSEPDACMKYSLPNSSQELSYHFKFGSLTT 2
PIVTSS NIL+L A A +T S ER Y P AC KYS P SYHF GS+ T
Sbjct: 996 DPIVTSSLLNILRLPFLAAASEATISAERTYIGP*ACKKYSFPIKLPCFSYHFSLGSVIT 817
>emb|BX818880.1|CNS0A9Q5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB22ZG10 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1439
Score = 196 bits (423), Expect = 5e-049
Identities = 74/118 (62%), Positives = 93/118 (78%)
Frame = +3 / +2
Query: 3 VVNDPNLKWYESSWELLGNEYFMHASGSLYALSSEVVEALATAKSDSLRMFDYEDVTIGA 182
V+ DP LKWYE L+GNEYF+HA G +Y LS+E+V +LA A++ SLRMF+ EDVTIG+
Sbjct: 791 VITDPKLKWYEKQGNLIGNEYFLHAYGPIYVLSAEIVASLAAARNGSLRMFNNEDVTIGS 970
Query: 183 WMLAMNVKHEDNRAMCDSVCTPTSIAVWDSKKCSGTCNVADKIKQLHNTTVCSKSPTL 356
WMLAM+V HEDNRA+CD C+P SIAVWD KCSG C+ ++K+LH T +CSKSPTL
Sbjct: 971 WMLAMDVHHEDNRALCDPHCSPKSIAVWDIPKCSGLCDPESRLKELHKTDMCSKSPTL 1144
Score = 123 bits (263), Expect = 6e-027
Identities = 64/120 (53%), Positives = 70/120 (58%)
Frame = -2 / -3
Query: 361 GGNVGLFEHTVVLWSCFILSATLQVPEHFLLSHTAMEVGVHTESHIARLSSCFTFIASIH 182
GGNVGL EH VL S F + Q PEH +S TAM+ G SH ARLSS T IASI
Sbjct: 1149 GGNVGLLEHISVL*SSFNRLSGSQSPEHLGMSQTAMDFGEQCGSHKARLSS*CTSIASIQ 970
Query: 181 APIVTSS*SNILKLSLFAVARASTTSEERAYSEPDACMKYSLPNSSQELSYHFKFGSLTT 2
PIVTSS NIL+L A A +T S ER Y P AC KYS P SYHF GS+ T
Sbjct: 969 DPIVTSSLLNILRLPFLAAASEATISAERTYIGP*ACKKYSFPIKLPCFSYHFSLGSVIT 790
>gb|BT015330.1| Arabidopsis thaliana At2g26100 gene, complete cds
Length = 1246
Score = 196 bits (423), Expect = 5e-049
Identities = 74/118 (62%), Positives = 93/118 (78%)
Frame = +3 / +2
Query: 3 VVNDPNLKWYESSWELLGNEYFMHASGSLYALSSEVVEALATAKSDSLRMFDYEDVTIGA 182
V+ DP LKWYE L+GNEYF+HA G +Y LS+E+V +LA A++ SLRMF+ EDVTIG+
Sbjct: 770 VITDPKLKWYEKQGNLIGNEYFLHAYGPIYVLSAEIVASLAAARNGSLRMFNNEDVTIGS 949
Query: 183 WMLAMNVKHEDNRAMCDSVCTPTSIAVWDSKKCSGTCNVADKIKQLHNTTVCSKSPTL 356
WMLAM+V HEDNRA+CD C+P SIAVWD KCSG C+ ++K+LH T +CSKSPTL
Sbjct: 950 WMLAMDVHHEDNRALCDPHCSPKSIAVWDIPKCSGLCDPESRLKELHKTDMCSKSPTL 1123
Score = 123 bits (263), Expect = 6e-027
Identities = 64/120 (53%), Positives = 70/120 (58%)
Frame = -2 / -2
Query: 361 GGNVGLFEHTVVLWSCFILSATLQVPEHFLLSHTAMEVGVHTESHIARLSSCFTFIASIH 182
GGNVGL EH VL S F + Q PEH +S TAM+ G SH ARLSS T IASI
Sbjct: 1128 GGNVGLLEHISVL*SSFNRLSGSQSPEHLGMSQTAMDFGEQCGSHKARLSS*CTSIASIQ 949
Query: 181 APIVTSS*SNILKLSLFAVARASTTSEERAYSEPDACMKYSLPNSSQELSYHFKFGSLTT 2
PIVTSS NIL+L A A +T S ER Y P AC KYS P SYHF GS+ T
Sbjct: 948 DPIVTSSLLNILRLPFLAAASEATISAERTYIGP*ACKKYSFPIKLPCFSYHFSLGSVIT 769
>gb|BT015706.1| Arabidopsis thaliana At2g26100 gene, complete cds
Length = 1116
Score = 196 bits (423), Expect = 5e-049
Identities = 74/118 (62%), Positives = 93/118 (78%)
Frame = +3 / +1
Query: 3 VVNDPNLKWYESSWELLGNEYFMHASGSLYALSSEVVEALATAKSDSLRMFDYEDVTIGA 182
V+ DP LKWYE L+GNEYF+HA G +Y LS+E+V +LA A++ SLRMF+ EDVTIG+
Sbjct: 739 VITDPKLKWYEKQGNLIGNEYFLHAYGPIYVLSAEIVASLAAARNGSLRMFNNEDVTIGS 918
Query: 183 WMLAMNVKHEDNRAMCDSVCTPTSIAVWDSKKCSGTCNVADKIKQLHNTTVCSKSPTL 356
WMLAM+V HEDNRA+CD C+P SIAVWD KCSG C+ ++K+LH T +CSKSPTL
Sbjct: 919 WMLAMDVHHEDNRALCDPHCSPKSIAVWDIPKCSGLCDPESRLKELHKTDMCSKSPTL 1092
Score = 123 bits (263), Expect = 6e-027
Identities = 64/120 (53%), Positives = 70/120 (58%)
Frame = -2 / -2
Query: 361 GGNVGLFEHTVVLWSCFILSATLQVPEHFLLSHTAMEVGVHTESHIARLSSCFTFIASIH 182
GGNVGL EH VL S F + Q PEH +S TAM+ G SH ARLSS T IASI
Sbjct: 1097 GGNVGLLEHISVL*SSFNRLSGSQSPEHLGMSQTAMDFGEQCGSHKARLSS*CTSIASIQ 918
Query: 181 APIVTSS*SNILKLSLFAVARASTTSEERAYSEPDACMKYSLPNSSQELSYHFKFGSLTT 2
PIVTSS NIL+L A A +T S ER Y P AC KYS P SYHF GS+ T
Sbjct: 917 DPIVTSSLLNILRLPFLAAASEATISAERTYIGP*ACKKYSFPIKLPCFSYHFSLGSVIT 738
>ref|NM_128168.3| Arabidopsis thaliana transferase, transferring glycosyl groups /
transferase, transferring hexosyl groups AT2G26100 mRNA,
complete cds
Length = 1498
Score = 196 bits (423), Expect = 5e-049
Identities = 74/118 (62%), Positives = 93/118 (78%)
Frame = +3 / +2
Query: 3 VVNDPNLKWYESSWELLGNEYFMHASGSLYALSSEVVEALATAKSDSLRMFDYEDVTIGA 182
V+ DP LKWYE L+GNEYF+HA G +Y LS+E+V +LA A++ SLRMF+ EDVTIG+
Sbjct: 818 VITDPKLKWYEKQGNLIGNEYFLHAYGPIYVLSAEIVASLAAARNGSLRMFNNEDVTIGS 997
Query: 183 WMLAMNVKHEDNRAMCDSVCTPTSIAVWDSKKCSGTCNVADKIKQLHNTTVCSKSPTL 356
WMLAM+V HEDNRA+CD C+P SIAVWD KCSG C+ ++K+LH T +CSKSPTL
Sbjct: 998 WMLAMDVHHEDNRALCDPHCSPKSIAVWDIPKCSGLCDPESRLKELHKTDMCSKSPTL 1171
Score = 123 bits (263), Expect = 6e-027
Identities = 64/120 (53%), Positives = 70/120 (58%)
Frame = -2 / -2
Query: 361 GGNVGLFEHTVVLWSCFILSATLQVPEHFLLSHTAMEVGVHTESHIARLSSCFTFIASIH 182
GGNVGL EH VL S F + Q PEH +S TAM+ G SH ARLSS T IASI
Sbjct: 1176 GGNVGLLEHISVL*SSFNRLSGSQSPEHLGMSQTAMDFGEQCGSHKARLSS*CTSIASIQ 997
Query: 181 APIVTSS*SNILKLSLFAVARASTTSEERAYSEPDACMKYSLPNSSQELSYHFKFGSLTT 2
PIVTSS NIL+L A A +T S ER Y P AC KYS P SYHF GS+ T
Sbjct: 996 DPIVTSSLLNILRLPFLAAASEATISAERTYIGP*ACKKYSFPIKLPCFSYHFSLGSVIT 817
>gb|AY128376.1| Arabidopsis thaliana unknown protein (At1g53290) mRNA, complete cds
Length = 1172
Score = 176 bits (379), Expect = 6e-043
Identities = 68/118 (57%), Positives = 86/118 (72%)
Frame = +3 / +1
Query: 3 VVNDPNLKWYESSWELLGNEYFMHASGSLYALSSEVVEALATAKSDSLRMFDYEDVTIGA 182
V DP LKWYE LLG EYF+HA G +YALS++VV +L K++S RMF+ EDVTIGA
Sbjct: 670 VFTDPKLKWYEPLSHLLGKEYFLHAYGPIYALSADVVASLVALKNNSFRMFNNEDVTIGA 849
Query: 183 WMLAMNVKHEDNRAMCDSVCTPTSIAVWDSKKCSGTCNVADKIKQLHNTTVCSKSPTL 356
WMLAMNV HE++ +C+ C+P+S+AVWD KCSG CN ++ +LH CSKSPTL
Sbjct: 850 WMLAMNVNHENHHILCEPECSPSSVAVWDIPKCSGLCNPEKRMLELHKQESCSKSPTL 1023
Score = 107 bits (229), Expect = 3e-022
Identities = 60/119 (50%), Positives = 67/119 (56%)
Frame = -2 / -1
Query: 358 GNVGLFEHTVVLWSCFILSATLQVPEHFLLSHTAMEVGVHTESHIARLSSCFTFIASIHA 179
G VGLFE L S IL + LQ PEH +S TA E G H+ S S TFIASIHA
Sbjct: 1025 GKVGLFEQLSCL*SSNILFSGLQRPEHLGMSQTATEEGEHSGSQRM*WFSWLTFIASIHA 846
Query: 178 PIVTSS*SNILKLSLFAVARASTTSEERAYSEPDACMKYSLPNSSQELSYHFKFGSLTT 2
PIVTSS NILKL + +TTS ERA P A KYS P+ SYH GS+ T
Sbjct: 845 PIVTSSLLNILKLLFLRATKLATTSAERA*IGP*A*RKYSFPSR*DNGSYHLSLGSVKT 669
>gb|BT008831.1| Arabidopsis thaliana At1g53290 mRNA, complete cds
Length = 1038
Score = 176 bits (379), Expect = 6e-043
Identities = 68/118 (57%), Positives = 86/118 (72%)
Frame = +3 / +1
Query: 3 VVNDPNLKWYESSWELLGNEYFMHASGSLYALSSEVVEALATAKSDSLRMFDYEDVTIGA 182
V DP LKWYE LLG EYF+HA G +YALS++VV +L K++S RMF+ EDVTIGA
Sbjct: 667 VFTDPKLKWYEPLSHLLGKEYFLHAYGPIYALSADVVASLVALKNNSFRMFNNEDVTIGA 846
Query: 183 WMLAMNVKHEDNRAMCDSVCTPTSIAVWDSKKCSGTCNVADKIKQLHNTTVCSKSPTL 356
WMLAMNV HE++ +C+ C+P+S+AVWD KCSG CN ++ +LH CSKSPTL
Sbjct: 847 WMLAMNVNHENHHILCEPECSPSSVAVWDIPKCSGLCNPEKRMLELHKQESCSKSPTL 1020
Score = 107 bits (229), Expect = 3e-022
Identities = 60/119 (50%), Positives = 67/119 (56%)
Frame = -2 / -2
Query: 358 GNVGLFEHTVVLWSCFILSATLQVPEHFLLSHTAMEVGVHTESHIARLSSCFTFIASIHA 179
G VGLFE L S IL + LQ PEH +S TA E G H+ S S TFIASIHA
Sbjct: 1022 GKVGLFEQLSCL*SSNILFSGLQRPEHLGMSQTATEEGEHSGSQRM*WFSWLTFIASIHA 843
Query: 178 PIVTSS*SNILKLSLFAVARASTTSEERAYSEPDACMKYSLPNSSQELSYHFKFGSLTT 2
PIVTSS NILKL + +TTS ERA P A KYS P+ SYH GS+ T
Sbjct: 842 PIVTSSLLNILKLLFLRATKLATTSAERA*IGP*A*RKYSFPSR*DNGSYHLSLGSVKT 666
>emb|BX818399.1|CNS0AAJ6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL77ZA05 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 1045
Score = 176 bits (379), Expect = 6e-043
Identities = 68/118 (57%), Positives = 86/118 (72%)
Frame = +3 / +3
Query: 3 VVNDPNLKWYESSWELLGNEYFMHASGSLYALSSEVVEALATAKSDSLRMFDYEDVTIGA 182
V DP LKWYE LLG EYF+HA G +YALS++VV +L K++S RMF+ EDVTIGA
Sbjct: 609 VFTDPKLKWYEPLSHLLGKEYFLHAYGPIYALSADVVASLVALKNNSFRMFNNEDVTIGA 788
Query: 183 WMLAMNVKHEDNRAMCDSVCTPTSIAVWDSKKCSGTCNVADKIKQLHNTTVCSKSPTL 356
WMLAMNV HE++ +C+ C+P+S+AVWD KCSG CN ++ +LH CSKSPTL
Sbjct: 789 WMLAMNVNHENHHILCEPECSPSSVAVWDIPKCSGLCNPEKRMLELHKQESCSKSPTL 962
Score = 107 bits (229), Expect = 3e-022
Identities = 60/119 (50%), Positives = 67/119 (56%)
Frame = -2 / -1
Query: 358 GNVGLFEHTVVLWSCFILSATLQVPEHFLLSHTAMEVGVHTESHIARLSSCFTFIASIHA 179
G VGLFE L S IL + LQ PEH +S TA E G H+ S S TFIASIHA
Sbjct: 964 GKVGLFEQLSCL*SSNILFSGLQRPEHLGMSQTATEEGEHSGSQRM*WFSWLTFIASIHA 785
Query: 178 PIVTSS*SNILKLSLFAVARASTTSEERAYSEPDACMKYSLPNSSQELSYHFKFGSLTT 2
PIVTSS NILKL + +TTS ERA P A KYS P+ SYH GS+ T
Sbjct: 784 PIVTSSLLNILKLLFLRATKLATTSAERA*IGP*A*RKYSFPSR*DNGSYHLSLGSVKT 608
>ref|NM_104207.2| Arabidopsis thaliana transferase, transferring glycosyl groups /
transferase, transferring hexosyl groups AT1G53290 mRNA,
complete cds
Length = 1331
Score = 176 bits (379), Expect = 6e-043
Identities = 68/118 (57%), Positives = 86/118 (72%)
Frame = +3 / +1
Query: 3 VVNDPNLKWYESSWELLGNEYFMHASGSLYALSSEVVEALATAKSDSLRMFDYEDVTIGA 182
V DP LKWYE LLG EYF+HA G +YALS++VV +L K++S RMF+ EDVTIGA
Sbjct: 721 VFTDPKLKWYEPLSHLLGKEYFLHAYGPIYALSADVVASLVALKNNSFRMFNNEDVTIGA 900
Query: 183 WMLAMNVKHEDNRAMCDSVCTPTSIAVWDSKKCSGTCNVADKIKQLHNTTVCSKSPTL 356
WMLAMNV HE++ +C+ C+P+S+AVWD KCSG CN ++ +LH CSKSPTL
Sbjct: 901 WMLAMNVNHENHHILCEPECSPSSVAVWDIPKCSGLCNPEKRMLELHKQESCSKSPTL 1074
Score = 107 bits (229), Expect = 3e-022
Identities = 60/119 (50%), Positives = 67/119 (56%)
Frame = -2 / -1
Query: 358 GNVGLFEHTVVLWSCFILSATLQVPEHFLLSHTAMEVGVHTESHIARLSSCFTFIASIHA 179
G VGLFE L S IL + LQ PEH +S TA E G H+ S S TFIASIHA
Sbjct: 1076 GKVGLFEQLSCL*SSNILFSGLQRPEHLGMSQTATEEGEHSGSQRM*WFSWLTFIASIHA 897
Query: 178 PIVTSS*SNILKLSLFAVARASTTSEERAYSEPDACMKYSLPNSSQELSYHFKFGSLTT 2
PIVTSS NILKL + +TTS ERA P A KYS P+ SYH GS+ T
Sbjct: 896 PIVTSSLLNILKLLFLRATKLATTSAERA*IGP*A*RKYSFPSR*DNGSYHLSLGSVKT 720
>gb|AY070398.1| Arabidopsis thaliana putative galactosyltransferase (At3g14960) mRNA,
complete cds
Length = 1429
Score = 173 bits (373), Expect = 4e-042
Identities = 69/118 (58%), Positives = 84/118 (71%)
Frame = +3 / +3
Query: 3 VVNDPNLKWYESSWELLGNEYFMHASGSLYALSSEVVEALATAKSDSLRMFDYEDVTIGA 182
V DP LKWYE +LLG EYF+HA G +YALS++VV +L K++S RMF EDVTIGA
Sbjct: 717 VFTDPKLKWYEPLADLLGKEYFLHAYGPIYALSADVVTSLVALKNNSFRMFSNEDVTIGA 896
Query: 183 WMLAMNVKHEDNRAMCDSVCTPTSIAVWDSKKCSGTCNVADKIKQLHNTTVCSKSPTL 356
WMLAMNV HE+ +C+ C+P SIAVWD KCSG CN ++ +LH CSKSPTL
Sbjct: 897 WMLAMNVNHENLHTLCEPECSPYSIAVWDIPKCSGLCNPEKRMLELHMLESCSKSPTL 1070
Score = 122 bits (260), Expect = 2e-026
Identities = 63/119 (52%), Positives = 72/119 (60%)
Frame = -2 / -1
Query: 358 GNVGLFEHTVVLWSCFILSATLQVPEHFLLSHTAMEVGVHTESHIARLSSCFTFIASIHA 179
G VGLFE + S IL + LQ PEHF +S TAME G H+ S S TFIASIHA
Sbjct: 1072 GKVGLFEQLSSM*SSNILFSGLQRPEHFGISQTAMEYGEHSGSQRV*RFSWLTFIASIHA 893
Query: 178 PIVTSS*SNILKLSLFAVARASTTSEERAYSEPDACMKYSLPNSSQELSYHFKFGSLTT 2
P+VTSS NILKL + TTS ERAY P A KYS P+ S + SYH FGS+ T
Sbjct: 892 PMVTSSLLNILKLLFLRATKLVTTSAERAYMGP*A*RKYSFPSRSAKGSYHLSFGSVKT 716
>gb|AY133728.1| Arabidopsis thaliana clone U19626 putative galactosyltransferase
(At3g14960) mRNA, complete cds
Length = 1063
Score = 173 bits (373), Expect = 4e-042
Identities = 69/118 (58%), Positives = 84/118 (71%)
Frame = +3 / +1
Query: 3 VVNDPNLKWYESSWELLGNEYFMHASGSLYALSSEVVEALATAKSDSLRMFDYEDVTIGA 182
V DP LKWYE +LLG EYF+HA G +YALS++VV +L K++S RMF EDVTIGA
Sbjct: 661 VFTDPKLKWYEPLADLLGKEYFLHAYGPIYALSADVVTSLVALKNNSFRMFSNEDVTIGA 840
Query: 183 WMLAMNVKHEDNRAMCDSVCTPTSIAVWDSKKCSGTCNVADKIKQLHNTTVCSKSPTL 356
WMLAMNV HE+ +C+ C+P SIAVWD KCSG CN ++ +LH CSKSPTL
Sbjct: 841 WMLAMNVNHENLHTLCEPECSPYSIAVWDIPKCSGLCNPEKRMLELHMLESCSKSPTL 1014
Score = 122 bits (260), Expect = 2e-026
Identities = 63/119 (52%), Positives = 72/119 (60%)
Frame = -2 / -3
Query: 358 GNVGLFEHTVVLWSCFILSATLQVPEHFLLSHTAMEVGVHTESHIARLSSCFTFIASIHA 179
G VGLFE + S IL + LQ PEHF +S TAME G H+ S S TFIASIHA
Sbjct: 1016 GKVGLFEQLSSM*SSNILFSGLQRPEHFGISQTAMEYGEHSGSQRV*RFSWLTFIASIHA 837
Query: 178 PIVTSS*SNILKLSLFAVARASTTSEERAYSEPDACMKYSLPNSSQELSYHFKFGSLTT 2
P+VTSS NILKL + TTS ERAY P A KYS P+ S + SYH FGS+ T
Sbjct: 836 PMVTSSLLNILKLLFLRATKLVTTSAERAYMGP*A*RKYSFPSRSAKGSYHLSFGSVKT 660
>emb|BX824144.1|CNS0A6RK Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH25ZH09 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1395
Score = 173 bits (373), Expect = 4e-042
Identities = 69/118 (58%), Positives = 84/118 (71%)
Frame = +3 / +1
Query: 3 VVNDPNLKWYESSWELLGNEYFMHASGSLYALSSEVVEALATAKSDSLRMFDYEDVTIGA 182
V DP LKWYE +LLG EYF+HA G +YALS++VV +L K++S RMF EDVTIGA
Sbjct: 706 VFTDPKLKWYEPLADLLGKEYFLHAYGPIYALSADVVTSLVALKNNSFRMFSNEDVTIGA 885
Query: 183 WMLAMNVKHEDNRAMCDSVCTPTSIAVWDSKKCSGTCNVADKIKQLHNTTVCSKSPTL 356
WMLAMNV HE+ +C+ C+P SIAVWD KCSG CN ++ +LH CSKSPTL
Sbjct: 886 WMLAMNVNHENLHTLCEPECSPYSIAVWDIPKCSGLCNPEKRMLELHMLESCSKSPTL 1059
Score = 122 bits (260), Expect = 2e-026
Identities = 63/119 (52%), Positives = 72/119 (60%)
Frame = -2 / -2
Query: 358 GNVGLFEHTVVLWSCFILSATLQVPEHFLLSHTAMEVGVHTESHIARLSSCFTFIASIHA 179
G VGLFE + S IL + LQ PEHF +S TAME G H+ S S TFIASIHA
Sbjct: 1061 GKVGLFEQLSSM*SSNILFSGLQRPEHFGISQTAMEYGEHSGSQRV*RFSWLTFIASIHA 882
Query: 178 PIVTSS*SNILKLSLFAVARASTTSEERAYSEPDACMKYSLPNSSQELSYHFKFGSLTT 2
P+VTSS NILKL + TTS ERAY P A KYS P+ S + SYH FGS+ T
Sbjct: 881 PMVTSSLLNILKLLFLRATKLVTTSAERAYMGP*A*RKYSFPSRSAKGSYHLSFGSVKT 705
>ref|NM_112358.3| Arabidopsis thaliana transferase, transferring glycosyl groups /
transferase, transferring hexosyl groups AT3G14960 mRNA,
complete cds
Length = 1444
Score = 173 bits (373), Expect = 4e-042
Identities = 69/118 (58%), Positives = 84/118 (71%)
Frame = +3 / +3
Query: 3 VVNDPNLKWYESSWELLGNEYFMHASGSLYALSSEVVEALATAKSDSLRMFDYEDVTIGA 182
V DP LKWYE +LLG EYF+HA G +YALS++VV +L K++S RMF EDVTIGA
Sbjct: 717 VFTDPKLKWYEPLADLLGKEYFLHAYGPIYALSADVVTSLVALKNNSFRMFSNEDVTIGA 896
Query: 183 WMLAMNVKHEDNRAMCDSVCTPTSIAVWDSKKCSGTCNVADKIKQLHNTTVCSKSPTL 356
WMLAMNV HE+ +C+ C+P SIAVWD KCSG CN ++ +LH CSKSPTL
Sbjct: 897 WMLAMNVNHENLHTLCEPECSPYSIAVWDIPKCSGLCNPEKRMLELHMLESCSKSPTL 1070
Score = 122 bits (260), Expect = 2e-026
Identities = 63/119 (52%), Positives = 72/119 (60%)
Frame = -2 / -1
Query: 358 GNVGLFEHTVVLWSCFILSATLQVPEHFLLSHTAMEVGVHTESHIARLSSCFTFIASIHA 179
G VGLFE + S IL + LQ PEHF +S TAME G H+ S S TFIASIHA
Sbjct: 1072 GKVGLFEQLSSM*SSNILFSGLQRPEHFGISQTAMEYGEHSGSQRV*RFSWLTFIASIHA 893
Query: 178 PIVTSS*SNILKLSLFAVARASTTSEERAYSEPDACMKYSLPNSSQELSYHFKFGSLTT 2
P+VTSS NILKL + TTS ERAY P A KYS P+ S + SYH FGS+ T
Sbjct: 892 PMVTSSLLNILKLLFLRATKLVTTSAERAYMGP*A*RKYSFPSRSAKGSYHLSFGSVKT 716
>emb|BX823512.1|CNS0A6KQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS46ZB01 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1383
Score = 173 bits (373), Expect = 4e-042
Identities = 69/118 (58%), Positives = 84/118 (71%)
Frame = +3 / +2
Query: 3 VVNDPNLKWYESSWELLGNEYFMHASGSLYALSSEVVEALATAKSDSLRMFDYEDVTIGA 182
V DP LKWYE +LLG EYF+HA G +YALS++VV +L K++S RMF EDVTIGA
Sbjct: 677 VFTDPKLKWYEPLADLLGKEYFLHAYGPIYALSADVVTSLVALKNNSFRMFSNEDVTIGA 856
Query: 183 WMLAMNVKHEDNRAMCDSVCTPTSIAVWDSKKCSGTCNVADKIKQLHNTTVCSKSPTL 356
WMLAMNV HE+ +C+ C+P SIAVWD KCSG CN ++ +LH CSKSPTL
Sbjct: 857 WMLAMNVNHENLHTLCEPECSPYSIAVWDIPKCSGLCNPEKRMLELHMLESCSKSPTL 1030
Score = 122 bits (260), Expect = 2e-026
Identities = 63/119 (52%), Positives = 72/119 (60%)
Frame = -2 / -1
Query: 358 GNVGLFEHTVVLWSCFILSATLQVPEHFLLSHTAMEVGVHTESHIARLSSCFTFIASIHA 179
G VGLFE + S IL + LQ PEHF +S TAME G H+ S S TFIASIHA
Sbjct: 1032 GKVGLFEQLSSM*SSNILFSGLQRPEHFGISQTAMEYGEHSGSQRV*RFSWLTFIASIHA 853
Query: 178 PIVTSS*SNILKLSLFAVARASTTSEERAYSEPDACMKYSLPNSSQELSYHFKFGSLTT 2
P+VTSS NILKL + TTS ERAY P A KYS P+ S + SYH FGS+ T
Sbjct: 852 PMVTSSLLNILKLLFLRATKLVTTSAERAYMGP*A*RKYSFPSRSAKGSYHLSFGSVKT 676
>emb|BX818271.1|CNS0AEK9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL6ZG03 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 1152
Score = 171 bits (367), Expect = 3e-041
Identities = 66/118 (55%), Positives = 85/118 (72%)
Frame = +3 / +3
Query: 3 VVNDPNLKWYESSWELLGNEYFMHASGSLYALSSEVVEALATAKSDSLRMFDYEDVTIGA 182
V DP LKWYE LLG EYF+HA G +YALS++VV +L K++S RMF+ EDVTIGA
Sbjct: 711 VFTDPELKWYEPLSHLLGKEYFLHAYGPIYALSADVVASLVALKNNSFRMFNNEDVTIGA 890
Query: 183 WMLAMNVKHEDNRAMCDSVCTPTSIAVWDSKKCSGTCNVADKIKQLHNTTVCSKSPTL 356
WMLAMNV HE++ +C+ C+P+S+AVWD KCSG CN ++ ++ CSKSPTL
Sbjct: 891 WMLAMNVNHENHHILCEPECSPSSVAVWDIPKCSGLCNPEKRMLEVKKQESCSKSPTL 1064
Score = 104 bits (222), Expect = 3e-021
Identities = 58/119 (48%), Positives = 66/119 (55%)
Frame = -2 / -3
Query: 358 GNVGLFEHTVVLWSCFILSATLQVPEHFLLSHTAMEVGVHTESHIARLSSCFTFIASIHA 179
G VGLFE + IL + LQ PEH +S TA E G H+ S S TFIASIHA
Sbjct: 1066 GKVGLFEQLSCFLTSNILFSGLQRPEHLGMSQTATEEGEHSGSQRM*WFSWLTFIASIHA 887
Query: 178 PIVTSS*SNILKLSLFAVARASTTSEERAYSEPDACMKYSLPNSSQELSYHFKFGSLTT 2
PIVTSS NILKL + +TTS ERA P A KYS P+ SYH GS+ T
Sbjct: 886 PIVTSSLLNILKLLFLRATKLATTSAERA*IGP*A*RKYSFPSR*DNGSYHLSSGSVKT 710
>gb|AC004747.3| Arabidopsis thaliana chromosome 2 clone T19L18 map B68, complete
sequence
Length = 87080
Score = 99.1 bits (210), Expect(3) = 9e-038
Identities = 38/53 (71%), Positives = 44/53 (83%)
Frame = +3 / +2
Query: 141 SLRMFDYEDVTIGAWMLAMNVKHEDNRAMCDSVCTPTSIAVWDSKKCSGTCNV 299
SLRMF+ EDVTIG+WMLAM+V HEDNRA+CD C+P SIAVWD KCSG N+
Sbjct: 27962 SLRMFNNEDVTIGSWMLAMDVHHEDNRALCDPHCSPKSIAVWDIPKCSGNINM 28120
Score = 58.8 bits (122), Expect(3) = 9e-038
Identities = 23/51 (45%), Positives = 32/51 (62%)
Frame = +3 / +2
Query: 3 VVNDPNLKWYESSWELLGNEYFMHASGSLYALSSEVVEALATAKSDSLRMF 155
+V D YE L+GNEYF+HA G +Y LS+E+V +LA A++ MF
Sbjct: 27749 LVTDTEFVRYEKQGNLIGNEYFLHAYGPIYVLSAEIVASLAAARNGRFEMF 27901
Score = 39.6 bits (80), Expect(3) = 9e-038
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +3 / +3
Query: 276 KCSGTCNVADKIKQLHNTTVCSKSPTL 356
K G C+ ++K+LH T +CSKSPTL
Sbjct: 28179 KSLGLCDPESRLKELHKTDMCSKSPTL 28259
>gb|BP596219.1|BP596219 BP596219 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-33-F20 3',
mRNA sequence
Length = 440
Score = 157 bits (337), Expect = 4e-037
Identities = 60/103 (58%), Positives = 78/103 (75%)
Frame = +3 / -1
Query: 48 LLGNEYFMHASGSLYALSSEVVEALATAKSDSLRMFDYEDVTIGAWMLAMNVKHEDNRAM 227
LLG EYF+HA G +YALS++VV +L K++S RMF+ EDVTIGAWMLAMNV HE++ +
Sbjct: 431 LLGKEYFLHAYGPIYALSADVVASLVALKNNSFRMFNNEDVTIGAWMLAMNVNHENHHIL 252
Query: 228 CDSVCTPTSIAVWDSKKCSGTCNVADKIKQLHNTTVCSKSPTL 356
C+ C+P+S+AVWD KCSG CN ++ +LH CSKSPTL
Sbjct: 251 CEPECSPSSVAVWDIPKCSGLCNPEKRMLELHKQESCSKSPTL 123
>gb|AV820584.1|AV820584 AV820584 RAFL11 Arabidopsis thaliana cDNA clone RAFL11-11-D13 3',
mRNA sequence
Length = 419
Score = 134 bits (288), Expect = 2e-030
Identities = 51/90 (56%), Positives = 68/90 (75%)
Frame = +3 / -1
Query: 87 LYALSSEVVEALATAKSDSLRMFDYEDVTIGAWMLAMNVKHEDNRAMCDSVCTPTSIAVW 266
+YALS++VV +L K++S RMF+ EDVTIGAWMLAMNV HE++ +C+ C+P+S+AVW
Sbjct: 419 IYALSADVVASLVALKNNSFRMFNNEDVTIGAWMLAMNVNHENHHILCEPECSPSSVAVW 240
Query: 267 DSKKCSGTCNVADKIKQLHNTTVCSKSPTL 356
D KCSG CN ++ +LH CSKSPTL
Sbjct: 239 DIPKCSGLCNPEKRMLELHKQESCSKSPTL 150
>gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom arm complete sequence
Length = 14668883
Score = 89.0 bits (188), Expect(3) = 1e-029
Identities = 32/50 (64%), Positives = 41/50 (82%)
Frame = +3 / +3
Query: 141 SLRMFDYEDVTIGAWMLAMNVKHEDNRAMCDSVCTPTSIAVWDSKKCSGT 290
S RMF+ EDVTIGAWMLAMNV HE++ +C+ C+P+S+AVWD KCSG+
Sbjct: 4232175 SFRMFNNEDVTIGAWMLAMNVNHENHHILCEPECSPSSVAVWDIPKCSGS 4232324
Score = 47.3 bits (97), Expect(3) = 1e-029
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = +3 / +2
Query: 30 YESSWELLGNEYFMHASGSLYALSSEVVEALATAKSD 140
YE LLG EYF+HA G +YALS++VV +L K++
Sbjct: 4231979 YEPLSHLLGKEYFLHAYGPIYALSADVVASLVALKNN 4232089
Score = 33.1 bits (66), Expect(3) = 1e-029
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3 / +1
Query: 282 SGTCNVADKIKQLHNTTVCSKSPTL 356
+G CN ++ +LH CSKSPTL
Sbjct: 4232422 AGLCNPEKRMLELHKQESCSKSPTL 4232496
>gb|AC008007.7|AC008007 Genomic sequence for Arabidopsis thaliana BAC F12M16 from chromosome I,
complete sequence
Length = 130235
Score = 89.0 bits (188), Expect(3) = 1e-029
Identities = 32/50 (64%), Positives = 41/50 (82%)
Frame = +3 / +3
Query: 141 SLRMFDYEDVTIGAWMLAMNVKHEDNRAMCDSVCTPTSIAVWDSKKCSGT 290
S RMF+ EDVTIGAWMLAMNV HE++ +C+ C+P+S+AVWD KCSG+
Sbjct: 71817 SFRMFNNEDVTIGAWMLAMNVNHENHHILCEPECSPSSVAVWDIPKCSGS 71966
Score = 47.3 bits (97), Expect(3) = 1e-029
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = +3 / +2
Query: 30 YESSWELLGNEYFMHASGSLYALSSEVVEALATAKSD 140
YE LLG EYF+HA G +YALS++VV +L K++
Sbjct: 71621 YEPLSHLLGKEYFLHAYGPIYALSADVVASLVALKNN 71731
Score = 33.1 bits (66), Expect(3) = 1e-029
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3 / +1
Query: 282 SGTCNVADKIKQLHNTTVCSKSPTL 356
+G CN ++ +LH CSKSPTL
Sbjct: 72064 AGLCNPEKRMLELHKQESCSKSPTL 72138
>gb|AV818851.1|AV818851 AV818851 RAFL11 Arabidopsis thaliana cDNA clone RAFL11-01-A09 3',
mRNA sequence
Length = 427
Score = 132 bits (282), Expect = 2e-029
Identities = 50/92 (54%), Positives = 68/92 (73%)
Frame = +3 / -3
Query: 81 GSLYALSSEVVEALATAKSDSLRMFDYEDVTIGAWMLAMNVKHEDNRAMCDSVCTPTSIA 260
G +YALS++VV +L K++S RMF+ EDVT GAWMLAMNV HE++ +C+ C+P+S+A
Sbjct: 425 GPIYALSADVVASLVALKNNSFRMFNNEDVTKGAWMLAMNVNHENHHILCEPECSPSSVA 246
Query: 261 VWDSKKCSGTCNVADKIKQLHNTTVCSKSPTL 356
VW+ KCSG CN ++ +LH CSKSPTL
Sbjct: 245 VWEIPKCSGLCNPEKRMLELHKQESCSKSPTL 150
>dbj|AP000370.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K15M2
Length = 79279
Score = 86.3 bits (182), Expect(3) = 1e-028
Identities = 33/50 (66%), Positives = 38/50 (76%)
Frame = +3 / -3
Query: 141 SLRMFDYEDVTIGAWMLAMNVKHEDNRAMCDSVCTPTSIAVWDSKKCSGT 290
S RMF EDVTIGAWMLAMNV HE+ +C+ C+P SIAVWD KCSG+
Sbjct: 32624 SFRMFSNEDVTIGAWMLAMNVNHENLHTLCEPECSPYSIAVWDIPKCSGS 32475
Score = 48.3 bits (99), Expect(3) = 1e-028
Identities = 19/37 (51%), Positives = 27/37 (72%)
Frame = +3 / -3
Query: 30 YESSWELLGNEYFMHASGSLYALSSEVVEALATAKSD 140
YE +LLG EYF+HA G +YALS++VV +L K++
Sbjct: 32840 YEPLADLLGKEYFLHAYGPIYALSADVVTSLVALKNN 32730
Score = 32.2 bits (64), Expect(3) = 1e-028
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3 / -2
Query: 282 SGTCNVADKIKQLHNTTVCSKSPTL 356
+G CN ++ +LH CSKSPTL
Sbjct: 32376 AGLCNPEKRMLELHMLESCSKSPTL 32302
>emb|AL953547.1| Arabidopsis thaliana T-DNA flanking sequence GK-352B03-016361,
genomic survey sequence
Length = 594
Score = 89.0 bits (188), Expect(3) = 4e-028
Identities = 32/50 (64%), Positives = 41/50 (82%)
Frame = +3 / -3
Query: 141 SLRMFDYEDVTIGAWMLAMNVKHEDNRAMCDSVCTPTSIAVWDSKKCSGT 290
S RMF+ EDVTIGAWMLAMNV HE++ +C+ C+P+S+AVWD KCSG+
Sbjct: 349 SFRMFNNEDVTIGAWMLAMNVNHENHHILCEPECSPSSVAVWDIPKCSGS 200
Score = 47.3 bits (97), Expect(3) = 4e-028
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = +3 / -2
Query: 30 YESSWELLGNEYFMHASGSLYALSSEVVEALATAKSD 140
YE LLG EYF+HA G +YALS++VV +L K++
Sbjct: 545 YEPLSHLLGKEYFLHAYGPIYALSADVVASLVALKNN 435
Score = 28.6 bits (56), Expect(3) = 4e-028
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3 / -1
Query: 282 SGTCNVADKIKQLHNTTVCSKSPTL 356
+G C+ ++ +LH CS+SPTL
Sbjct: 102 AGLCSPEKRMLELHKQENCSQSPTL 28
>gb|AI995369.1|AI995369 701673573 A. thaliana, Columbia Col-0, inflorescence-1 Arabidopsis
thaliana cDNA clone 701673573, mRNA sequence
Length = 557
Score = 119 bits (255), Expect = 8e-026
Identities = 48/84 (57%), Positives = 61/84 (72%)
Frame = +3 / -2
Query: 105 EVVEALATAKSDSLRMFDYEDVTIGAWMLAMNVKHEDNRAMCDSVCTPTSIAVWDSKKCS 284
E+V +LA A++ S R + EDVTIG+W LAM V HEDNRA+ D C+P SIAVWD K S
Sbjct: 556 EIVASLAAARNGSXRXXNXEDVTIGSWXLAMXVHHEDNRALXDPHCSPKSIAVWDIPKXS 377
Query: 285 GTCNVADKIKQLHNTTVCSKSPTL 356
G C+ ++K+LH T +CSKSPTL
Sbjct: 376 GLCDPESRLKELHKTDMCSKSPTL 305
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,638,025,231
Number of Sequences: 1013581
Number of extensions: 22924545
Number of successful extensions: 168383
Number of sequences better than 1.0e-020: 27
length of database: 302,980,290
effective HSP length: 56
effective length of database: 246,219,754
effective search space used: 45550654490
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)