TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3023585.2.1
(635 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|NM_179453.1| Arabidopsis thaliana AGO1 (ARGONAUTE 1) AT... 197 9e-056
ref|NM_103737.2| Arabidopsis thaliana AGO1 (ARGONAUTE 1) AT... 197 9e-056
gb|U91995.1|ATU91995 Arabidopsis thaliana Argonaute protein... 197 9e-056
gb|BT000941.1| Arabidopsis thaliana clone C105223 putative ... 197 9e-056
gb|AY080690.1| Arabidopsis thaliana At1g48410 mRNA sequence 197 9e-056
gb|CK119358.1|CK119358 212p13.p1 AtM1 Arabidopsis thaliana ... 197 9e-056
emb|BX818680.1|CNS0ACI7 Arabidopsis thaliana Full-length cD... 197 9e-056
gb|AV441187.1|AV441187 AV441187 Arabidopsis thaliana above-... 197 9e-056
gb|AV563657.1|AV563657 AV563657 Arabidopsis thaliana green ... 197 9e-056
gb|AV545970.1|AV545970 AV545970 Arabidopsis thaliana roots ... 197 9e-056
emb|BX815116.1|CNS0AAU5 Arabidopsis thaliana Full-length cD... 194 6e-055
ref|NM_123748.2| Arabidopsis thaliana ZLL (ZWILLE) AT5G4381... 192 8e-055
emb|AJ223508.1|ART223508 Arabidopsis thaliana mRNA for Zwil... 192 8e-055
emb|AX505737.1| Sequence 432 from Patent WO0216655 192 2e-054
ref|NM_179779.1| Arabidopsis thaliana unknown protein AT2G2... 184 4e-051
emb|BX821460.1|CNS0A8DH Arabidopsis thaliana Full-length cD... 184 4e-051
gb|BX838222.1|BX838222 BX838222 Arabidopsis thaliana Siliqu... 184 4e-051
gb|AV548172.1|AV548172 AV548172 Arabidopsis thaliana roots ... 182 4e-051
gb|AV523806.1|AV523806 AV523806 Arabidopsis thaliana aboveg... 193 4e-048
gb|AV529891.1|AV529891 AV529891 Arabidopsis thaliana aboveg... 170 1e-047
gb|CB260762.1|CB260762 67-E009520-012-003-F21-T7R MPIZ-ADIS... 192 1e-047
gb|AV548086.1|AV548086 AV548086 Arabidopsis thaliana roots ... 160 8e-045
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 155 1e-044
gb|AC007932.3|F11A17 Arabidopsis thaliana chromosome 1 BAC ... 83 2e-044
gb|AC020889.3|AC020889 Genomic sequence for Arabidopsis tha... 83 2e-044
gb|AY600524.1| Arabidopsis thaliana hypothetical protein (A... 156 1e-043
gb|AC005824.3| Arabidopsis thaliana chromosome 2 clone F15K... 86 4e-042
gb|AC006929.4| Arabidopsis thaliana chromosome 2 clone T1E2... 86 4e-042
gb|AV534003.1|AV534003 AV534003 Arabidopsis thaliana flower... 151 6e-042
gb|AV532952.1|AV532952 AV532952 Arabidopsis thaliana flower... 151 6e-042
gb|AV560716.1|AV560716 AV560716 Arabidopsis thaliana green ... 151 6e-042
emb|AJ522260.1|ATH522260 Arabidopsis thaliana T-DNA flankin... 85 2e-041
gb|B25866.1|B25866 F28J22TRB IGF Arabidopsis thaliana genom... 86 5e-041
dbj|AB026651.1| Arabidopsis thaliana genomic DNA, chromosom... 103 2e-040
gb|AF154272.1|AF154272 Arabidopsis thaliana PINHEAD (PINHEA... 103 2e-040
gb|AC073178.9|AC073178 Arabidopsis thaliana chromosome 1 BA... 155 1e-039
ref|NM_105611.3| Arabidopsis thaliana AGO7 (ARGONAUTE7) AT1... 155 1e-039
gb|AY394564.1| Arabidopsis thaliana ZIPPY mRNA, complete cds 155 1e-039
gb|AV556836.1|AV556836 AV556836 Arabidopsis thaliana green ... 155 1e-039
gb|BP795190.1|BP795190 BP795190 RAFL7 Arabidopsis thaliana ... 142 2e-039
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 155 9e-037
gb|BH904361.1|BH904361 SALK_104357.53.75.x Arabidopsis thal... 86 1e-036
gb|BP618364.1|BP618364 BP618364 RAFL16 Arabidopsis thaliana... 130 6e-035
gb|BP619936.1|BP619936 BP619936 RAFL16 Arabidopsis thaliana... 127 8e-035
gb|BH617562.1|BH617562 SALK_037270 Arabidopsis thaliana TDN... 86 3e-030
gb|BP640077.1|BP640077 BP640077 RAFL19 Arabidopsis thaliana... 110 2e-029
gb|BP601377.1|BP601377 BP601377 RAFL16 Arabidopsis thaliana... 103 1e-027
gb|BP617474.1|BP617474 BP617474 RAFL16 Arabidopsis thaliana... 102 5e-027
gb|BP575189.1|BP575189 BP575189 RAFL14 Arabidopsis thaliana... 100 9e-027
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 121 3e-026
gb|BT005914.1| Arabidopsis thaliana At1g31280 gene, complet... 121 3e-026
gb|AC007654.2|AC007654 Genomic sequence for Arabidopsis tha... 121 3e-026
dbj|AK118463.1| Arabidopsis thaliana At1g31280 mRNA for unk... 121 3e-026
ref|NM_102866.1| Arabidopsis thaliana AGO2 AT1G31280 (AGO2)... 121 3e-026
gb|AV792863.1|AV792863 AV792863 RAFL7 Arabidopsis thaliana ... 100 4e-026
gb|BP611041.1|BP611041 BP611041 RAFL16 Arabidopsis thaliana... 98 6e-026
gb|BU635669.1|BU635669 028G09 Infected Arabidopsis Leaf Ara... 115 1e-024
gb|BP785021.1|BP785021 BP785021 RAFL7 Arabidopsis thaliana ... 92 6e-024
dbj|AK221864.1| Arabidopsis thaliana mRNA for zwille/pinhea... 108 2e-023
ref|NM_122122.2| Arabidopsis thaliana unknown protein AT5G2... 108 2e-023
dbj|AK118258.1| Arabidopsis thaliana At5g21150 mRNA for put... 107 3e-023
gb|BP606094.1|BP606094 BP606094 RAFL16 Arabidopsis thaliana... 89 3e-023
emb|AJ544236.1|ATH544236 Arabidopsis thaliana mRNA for ARGO... 105 1e-022
gb|AV523440.1|AV523440 AV523440 Arabidopsis thaliana aboveg... 107 3e-022
gb|AV524024.1|AV524024 AV524024 Arabidopsis thaliana aboveg... 107 3e-022
gb|AY035081.1| Arabidopsis thaliana putative Argonaute (AGO... 107 3e-022
gb|AY051033.1| Arabidopsis thaliana putative argonaute AGO1... 107 3e-022
emb|AX505699.1| Sequence 394 from Patent WO0216655 107 3e-022
emb|BX820023.1|CNS0A9EM Arabidopsis thaliana Full-length cD... 107 3e-022
ref|NM_128262.2| Arabidopsis thaliana AGO4 (ARGONAUTE 4) AT... 107 3e-022
emb|BX530820.1| Arabidopsis thaliana T-DNA flanking sequenc... 83 5e-022
gb|Z34562.1|Z34562 ATTS3322 Versailles-VB Arabidopsis thali... 71 1e-021
ref|NM_122111.2| Arabidopsis thaliana unknown protein AT5G2... 102 1e-021
gb|BP657306.1|BP657306 BP657306 RAFL19 Arabidopsis thaliana... 82 2e-021
ref|NM_102867.1| Arabidopsis thaliana unknown protein AT1G3... 104 2e-021
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 103 5e-021
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 103 5e-021
gb|BE523184.1|BE523184 M35A4STM Arabidopsis developing seed... 102 9e-021
>ref|NM_179453.1| Arabidopsis thaliana AGO1 (ARGONAUTE 1) AT1G48410 (AGO1) transcript
variant AT1G48410.2 mRNA, complete cds
Length = 3489
Score = 197 bits (425), Expect(2) = 9e-056
Identities = 76/92 (82%), Positives = 83/92 (90%)
Frame = +1 / +3
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTAD +Q+LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 2925 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCYTYARCTRSVSIVPPAY 3104
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
YAHLAAFRARFYMEPE S++ + S + GG
Sbjct: 3105 YAHLAAFRARFYMEPETSDSGSMASGSMARGG 3200
Score = 105 bits (224), Expect(2) = 8e-026
Identities = 59/91 (64%), Positives = 61/91 (67%)
Frame = -1 / -3
Query: 275 PPFVPLELFDVWFSDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISS 96
PP L L SD+SGSM RCA*YAGGT ETERVH A V* +L V S
Sbjct: 3199 PPRAMLPLAIEPLSDVSGSM*NRALKAARCA*YAGGTIETERVHLAYV*HKLLVRD*SPS 3020
Query: 95 AVKLFSSQRTW**AGLLVPWIPA*LQR*KSN 3
AVKLFSSQRTW**AG VP IPA*LQR*KSN
Sbjct: 3019 AVKLFSSQRTW**AGREVP*IPA*LQR*KSN 2927
Score = 41.8 bits (85), Expect(2) = 9e-056
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / +3
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KE VKRVMFYC*
Sbjct: 3246 VRPLPALKENVKRVMFYC* 3302
Score = 33.6 bits (67), Expect(2) = 8e-026
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -1 / -3
Query: 335 QQ*NITLFTFSFTAGRGFT 279
QQ*N+T FTFSF AG G T
Sbjct: 3301 QQ*NMTRFTFSFRAGSGLT 3245
>ref|NM_103737.2| Arabidopsis thaliana AGO1 (ARGONAUTE 1) AT1G48410 (AGO1) transcript
variant AT1G48410.1 mRNA, complete cds
Length = 3483
Score = 197 bits (425), Expect(2) = 9e-056
Identities = 76/92 (82%), Positives = 83/92 (90%)
Frame = +1 / +3
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTAD +Q+LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 2919 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCYTYARCTRSVSIVPPAY 3098
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
YAHLAAFRARFYMEPE S++ + S + GG
Sbjct: 3099 YAHLAAFRARFYMEPETSDSGSMASGSMARGG 3194
Score = 105 bits (224), Expect(2) = 8e-026
Identities = 59/91 (64%), Positives = 61/91 (67%)
Frame = -1 / -3
Query: 275 PPFVPLELFDVWFSDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISS 96
PP L L SD+SGSM RCA*YAGGT ETERVH A V* +L V S
Sbjct: 3193 PPRAMLPLAIEPLSDVSGSM*NRALKAARCA*YAGGTIETERVHLAYV*HKLLVRD*SPS 3014
Query: 95 AVKLFSSQRTW**AGLLVPWIPA*LQR*KSN 3
AVKLFSSQRTW**AG VP IPA*LQR*KSN
Sbjct: 3013 AVKLFSSQRTW**AGREVP*IPA*LQR*KSN 2921
Score = 41.8 bits (85), Expect(2) = 9e-056
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / +3
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KE VKRVMFYC*
Sbjct: 3240 VRPLPALKENVKRVMFYC* 3296
Score = 33.6 bits (67), Expect(2) = 8e-026
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -1 / -3
Query: 335 QQ*NITLFTFSFTAGRGFT 279
QQ*N+T FTFSF AG G T
Sbjct: 3295 QQ*NMTRFTFSFRAGSGLT 3239
>gb|U91995.1|ATU91995 Arabidopsis thaliana Argonaute protein (AGO1) mRNA, complete cds
Length = 3473
Score = 197 bits (425), Expect(2) = 9e-056
Identities = 76/92 (82%), Positives = 83/92 (90%)
Frame = +1 / +1
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTAD +Q+LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 2896 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCYTYARCTRSVSIVPPAY 3075
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
YAHLAAFRARFYMEPE S++ + S + GG
Sbjct: 3076 YAHLAAFRARFYMEPETSDSGSMASGSMARGG 3171
Score = 105 bits (224), Expect(2) = 8e-026
Identities = 59/91 (64%), Positives = 61/91 (67%)
Frame = -1 / -1
Query: 275 PPFVPLELFDVWFSDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISS 96
PP L L SD+SGSM RCA*YAGGT ETERVH A V* +L V S
Sbjct: 3170 PPRAMLPLAIEPLSDVSGSM*NRALKAARCA*YAGGTIETERVHLAYV*HKLLVRD*SPS 2991
Query: 95 AVKLFSSQRTW**AGLLVPWIPA*LQR*KSN 3
AVKLFSSQRTW**AG VP IPA*LQR*KSN
Sbjct: 2990 AVKLFSSQRTW**AGREVP*IPA*LQR*KSN 2898
Score = 41.8 bits (85), Expect(2) = 9e-056
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / +1
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KE VKRVMFYC*
Sbjct: 3217 VRPLPALKENVKRVMFYC* 3273
Score = 33.6 bits (67), Expect(2) = 8e-026
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -1 / -1
Query: 335 QQ*NITLFTFSFTAGRGFT 279
QQ*N+T FTFSF AG G T
Sbjct: 3272 QQ*NMTRFTFSFRAGSGLT 3216
>gb|BT000941.1| Arabidopsis thaliana clone C105223 putative leaf development protein
Argonaute (At1g48410) mRNA, complete cds
Length = 3177
Score = 197 bits (425), Expect(2) = 9e-056
Identities = 76/92 (82%), Positives = 83/92 (90%)
Frame = +1 / +1
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTAD +Q+LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 2770 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCYTYARCTRSVSIVPPAY 2949
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
YAHLAAFRARFYMEPE S++ + S + GG
Sbjct: 2950 YAHLAAFRARFYMEPETSDSGSMASGSMARGG 3045
Score = 105 bits (224), Expect(2) = 8e-026
Identities = 59/91 (64%), Positives = 61/91 (67%)
Frame = -1 / -2
Query: 275 PPFVPLELFDVWFSDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISS 96
PP L L SD+SGSM RCA*YAGGT ETERVH A V* +L V S
Sbjct: 3044 PPRAMLPLAIEPLSDVSGSM*NRALKAARCA*YAGGTIETERVHLAYV*HKLLVRD*SPS 2865
Query: 95 AVKLFSSQRTW**AGLLVPWIPA*LQR*KSN 3
AVKLFSSQRTW**AG VP IPA*LQR*KSN
Sbjct: 2864 AVKLFSSQRTW**AGREVP*IPA*LQR*KSN 2772
Score = 41.8 bits (85), Expect(2) = 9e-056
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / +1
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KE VKRVMFYC*
Sbjct: 3091 VRPLPALKENVKRVMFYC* 3147
Score = 33.6 bits (67), Expect(2) = 8e-026
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -1 / -2
Query: 335 QQ*NITLFTFSFTAGRGFT 279
QQ*N+T FTFSF AG G T
Sbjct: 3146 QQ*NMTRFTFSFRAGSGLT 3090
>gb|AY080690.1| Arabidopsis thaliana At1g48410 mRNA sequence
Length = 2764
Score = 197 bits (425), Expect(2) = 9e-056
Identities = 76/92 (82%), Positives = 83/92 (90%)
Frame = +1 / +2
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTAD +Q+LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 2168 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCYTYARCTRSVSIVPPAY 2347
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
YAHLAAFRARFYMEPE S++ + S + GG
Sbjct: 2348 YAHLAAFRARFYMEPETSDSGSMASGSMARGG 2443
Score = 105 bits (224), Expect(2) = 8e-026
Identities = 59/91 (64%), Positives = 61/91 (67%)
Frame = -1 / -2
Query: 275 PPFVPLELFDVWFSDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISS 96
PP L L SD+SGSM RCA*YAGGT ETERVH A V* +L V S
Sbjct: 2442 PPRAMLPLAIEPLSDVSGSM*NRALKAARCA*YAGGTIETERVHLAYV*HKLLVRD*SPS 2263
Query: 95 AVKLFSSQRTW**AGLLVPWIPA*LQR*KSN 3
AVKLFSSQRTW**AG VP IPA*LQR*KSN
Sbjct: 2262 AVKLFSSQRTW**AGREVP*IPA*LQR*KSN 2170
Score = 41.8 bits (85), Expect(2) = 9e-056
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / +2
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KE VKRVMFYC*
Sbjct: 2489 VRPLPALKENVKRVMFYC* 2545
Score = 33.6 bits (67), Expect(2) = 8e-026
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -1 / -2
Query: 335 QQ*NITLFTFSFTAGRGFT 279
QQ*N+T FTFSF AG G T
Sbjct: 2544 QQ*NMTRFTFSFRAGSGLT 2488
>gb|CK119358.1|CK119358 212p13.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011P13212
5-PRIME, mRNA sequence
Length = 775
Score = 197 bits (425), Expect(2) = 9e-056
Identities = 76/92 (82%), Positives = 83/92 (90%)
Frame = +1 / +3
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTAD +Q+LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 252 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCYTYARCTRSVSIVPPAY 431
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
YAHLAAFRARFYMEPE S++ + S + GG
Sbjct: 432 YAHLAAFRARFYMEPETSDSGSMASGSMARGG 527
Score = 105 bits (224), Expect(2) = 8e-026
Identities = 59/91 (64%), Positives = 61/91 (67%)
Frame = -1 / -1
Query: 275 PPFVPLELFDVWFSDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISS 96
PP L L SD+SGSM RCA*YAGGT ETERVH A V* +L V S
Sbjct: 526 PPRAMLPLAIEPLSDVSGSM*NRALKAARCA*YAGGTIETERVHLAYV*HKLLVRD*SPS 347
Query: 95 AVKLFSSQRTW**AGLLVPWIPA*LQR*KSN 3
AVKLFSSQRTW**AG VP IPA*LQR*KSN
Sbjct: 346 AVKLFSSQRTW**AGREVP*IPA*LQR*KSN 254
Score = 41.8 bits (85), Expect(2) = 9e-056
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / +3
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KE VKRVMFYC*
Sbjct: 573 VRPLPALKENVKRVMFYC* 629
Score = 33.6 bits (67), Expect(2) = 8e-026
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -1 / -1
Query: 335 QQ*NITLFTFSFTAGRGFT 279
QQ*N+T FTFSF AG G T
Sbjct: 628 QQ*NMTRFTFSFRAGSGLT 572
>emb|BX818680.1|CNS0ACI7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL91ZD02 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 728
Score = 197 bits (425), Expect(2) = 9e-056
Identities = 76/92 (82%), Positives = 83/92 (90%)
Frame = +1 / +1
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTAD +Q+LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 175 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCYTYARCTRSVSIVPPAY 354
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
YAHLAAFRARFYMEPE S++ + S + GG
Sbjct: 355 YAHLAAFRARFYMEPETSDSGSMASGSMARGG 450
Score = 105 bits (224), Expect(2) = 3e-026
Identities = 59/91 (64%), Positives = 61/91 (67%)
Frame = -1 / -1
Query: 275 PPFVPLELFDVWFSDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISS 96
PP L L SD+SGSM RCA*YAGGT ETERVH A V* +L V S
Sbjct: 449 PPRAMLPLAIEPLSDVSGSM*NRALKAARCA*YAGGTIETERVHLAYV*HKLLVRD*SPS 270
Query: 95 AVKLFSSQRTW**AGLLVPWIPA*LQR*KSN 3
AVKLFSSQRTW**AG VP IPA*LQR*KSN
Sbjct: 269 AVKLFSSQRTW**AGREVP*IPA*LQR*KSN 177
Score = 41.8 bits (85), Expect(2) = 9e-056
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / +1
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KE VKRVMFYC*
Sbjct: 496 VRPLPALKENVKRVMFYC* 552
Score = 35.0 bits (70), Expect(2) = 3e-026
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = -1 / -1
Query: 335 QQ*NITLFTFSFTAGRGFT 279
QQ*NIT FTFSF AG G T
Sbjct: 551 QQ*NITRFTFSFRAGSGLT 495
>gb|AV441187.1|AV441187 AV441187 Arabidopsis thaliana above-ground organ two to six-week
old Arabidopsis thaliana cDNA clone APZ31g03_f 3', mRNA
sequence
Length = 607
Score = 197 bits (425), Expect(2) = 9e-056
Identities = 76/92 (82%), Positives = 83/92 (90%)
Frame = +1 / -2
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTAD +Q+LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 495 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCYTYARCTRSVSIVPPAY 316
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
YAHLAAFRARFYMEPE S++ + S + GG
Sbjct: 315 YAHLAAFRARFYMEPETSDSGSMASGSMARGG 220
Score = 105 bits (224), Expect(2) = 8e-026
Identities = 59/91 (64%), Positives = 61/91 (67%)
Frame = -1 / +2
Query: 275 PPFVPLELFDVWFSDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISS 96
PP L L SD+SGSM RCA*YAGGT ETERVH A V* +L V S
Sbjct: 221 PPRAMLPLAIEPLSDVSGSM*NRALKAARCA*YAGGTIETERVHLAYV*HKLLVRD*SPS 400
Query: 95 AVKLFSSQRTW**AGLLVPWIPA*LQR*KSN 3
AVKLFSSQRTW**AG VP IPA*LQR*KSN
Sbjct: 401 AVKLFSSQRTW**AGREVP*IPA*LQR*KSN 493
Score = 41.8 bits (85), Expect(2) = 9e-056
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / -2
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KE VKRVMFYC*
Sbjct: 174 VRPLPALKENVKRVMFYC* 118
Score = 33.6 bits (67), Expect(2) = 8e-026
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -1 / +2
Query: 335 QQ*NITLFTFSFTAGRGFT 279
QQ*N+T FTFSF AG G T
Sbjct: 119 QQ*NMTRFTFSFRAGSGLT 175
>gb|AV563657.1|AV563657 AV563657 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ191b06F 3', mRNA sequence
Length = 601
Score = 197 bits (425), Expect(2) = 9e-056
Identities = 76/92 (82%), Positives = 83/92 (90%)
Frame = +1 / -3
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTAD +Q+LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 506 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCYTYARCTRSVSIVPPAY 327
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
YAHLAAFRARFYMEPE S++ + S + GG
Sbjct: 326 YAHLAAFRARFYMEPETSDSGSMASGSMARGG 231
Score = 105 bits (224), Expect(2) = 8e-026
Identities = 59/91 (64%), Positives = 61/91 (67%)
Frame = -1 / +1
Query: 275 PPFVPLELFDVWFSDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISS 96
PP L L SD+SGSM RCA*YAGGT ETERVH A V* +L V S
Sbjct: 232 PPRAMLPLAIEPLSDVSGSM*NRALKAARCA*YAGGTIETERVHLAYV*HKLLVRD*SPS 411
Query: 95 AVKLFSSQRTW**AGLLVPWIPA*LQR*KSN 3
AVKLFSSQRTW**AG VP IPA*LQR*KSN
Sbjct: 412 AVKLFSSQRTW**AGREVP*IPA*LQR*KSN 504
Score = 41.8 bits (85), Expect(2) = 9e-056
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / -3
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KE VKRVMFYC*
Sbjct: 185 VRPLPALKENVKRVMFYC* 129
Score = 33.6 bits (67), Expect(2) = 8e-026
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -1 / +1
Query: 335 QQ*NITLFTFSFTAGRGFT 279
QQ*N+T FTFSF AG G T
Sbjct: 130 QQ*NMTRFTFSFRAGSGLT 186
>gb|AV545970.1|AV545970 AV545970 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZL06e02F 3', mRNA sequence
Length = 575
Score = 197 bits (425), Expect(2) = 9e-056
Identities = 76/92 (82%), Positives = 83/92 (90%)
Frame = +1 / -1
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTAD +Q+LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 506 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCYTYARCTRSVSIVPPAY 327
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
YAHLAAFRARFYMEPE S++ + S + GG
Sbjct: 326 YAHLAAFRARFYMEPETSDSGSMASGSMARGG 231
Score = 105 bits (224), Expect(2) = 8e-026
Identities = 59/91 (64%), Positives = 61/91 (67%)
Frame = -1 / +1
Query: 275 PPFVPLELFDVWFSDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISS 96
PP L L SD+SGSM RCA*YAGGT ETERVH A V* +L V S
Sbjct: 232 PPRAMLPLAIEPLSDVSGSM*NRALKAARCA*YAGGTIETERVHLAYV*HKLLVRD*SPS 411
Query: 95 AVKLFSSQRTW**AGLLVPWIPA*LQR*KSN 3
AVKLFSSQRTW**AG VP IPA*LQR*KSN
Sbjct: 412 AVKLFSSQRTW**AGREVP*IPA*LQR*KSN 504
Score = 41.8 bits (85), Expect(2) = 9e-056
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / -1
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KE VKRVMFYC*
Sbjct: 185 VRPLPALKENVKRVMFYC* 129
Score = 33.6 bits (67), Expect(2) = 8e-026
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -1 / +1
Query: 335 QQ*NITLFTFSFTAGRGFT 279
QQ*N+T FTFSF AG G T
Sbjct: 130 QQ*NMTRFTFSFRAGSGLT 186
>emb|BX815116.1|CNS0AAU5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS34ZG07 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 3188
Score = 194 bits (419), Expect(2) = 6e-055
Identities = 75/92 (81%), Positives = 82/92 (89%)
Frame = +1 / +3
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTAD +Q+LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 2646 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCYTYARCTRSVSIVPPAY 2825
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
YAHLAA RARFYMEPE S++ + S + GG
Sbjct: 2826 YAHLAALRARFYMEPETSDSGSMASGSMARGG 2921
Score = 105 bits (224), Expect(2) = 8e-026
Identities = 59/91 (64%), Positives = 61/91 (67%)
Frame = -1 / -2
Query: 275 PPFVPLELFDVWFSDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISS 96
PP L L SD+SGSM RCA*YAGGT ETERVH A V* +L V S
Sbjct: 2920 PPRAMLPLAIEPLSDVSGSM*NRALRAARCA*YAGGTIETERVHLAYV*HKLLVRD*SPS 2741
Query: 95 AVKLFSSQRTW**AGLLVPWIPA*LQR*KSN 3
AVKLFSSQRTW**AG VP IPA*LQR*KSN
Sbjct: 2740 AVKLFSSQRTW**AGREVP*IPA*LQR*KSN 2648
Score = 41.8 bits (85), Expect(2) = 6e-055
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / +3
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KE VKRVMFYC*
Sbjct: 2967 VRPLPALKENVKRVMFYC* 3023
Score = 33.6 bits (67), Expect(2) = 8e-026
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -1 / -2
Query: 335 QQ*NITLFTFSFTAGRGFT 279
QQ*N+T FTFSF AG G T
Sbjct: 3022 QQ*NMTRFTFSFRAGSGLT 2966
>ref|NM_123748.2| Arabidopsis thaliana ZLL (ZWILLE) AT5G43810 (ZLL) mRNA, complete cds
Length = 3330
Score = 192 bits (413), Expect(2) = 8e-055
Identities = 73/89 (82%), Positives = 80/89 (89%)
Frame = +1 / +3
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTAD +Q+LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 2745 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSIVPPAY 2924
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGT 267
YAHLAAFRARFY+EPE+ ++ S T
Sbjct: 2925 YAHLAAFRARFYLEPEIMQDNGSPGKKNT 3011
Score = 102 bits (217), Expect(2) = 1e-026
Identities = 56/76 (73%), Positives = 57/76 (75%)
Frame = -1 / -3
Query: 230 ISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRTW**AG 51
ISGS R A*YAGGT ET+RVHRA*V*QRL V I SAVKLFSSQRTW* AG
Sbjct: 2974 ISGSR*KRARNAAR*A*YAGGTIETDRVHRA*V*QRLLVRD*IPSAVKLFSSQRTW*CAG 2795
Query: 50 LLVPWIPA*LQR*KSN 3
LLVP IPA LQR*KSN
Sbjct: 2794 LLVP*IPAWLQR*KSN 2747
Score = 44.1 bits (90), Expect(2) = 8e-055
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +1 / +3
Query: 280 VKPLPAVKEKVKRVMFYC*R 339
VKPLPA+KE VKRVMFYC*+
Sbjct: 3039 VKPLPALKENVKRVMFYC*K 3098
Score = 39.6 bits (80), Expect(2) = 1e-026
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -1 / -3
Query: 332 Q*NITLFTFSFTAGRGFT 279
Q*NITLFTFSF AG+GFT
Sbjct: 3091 Q*NITLFTFSFKAGKGFT 3038
>emb|AJ223508.1|ART223508 Arabidopsis thaliana mRNA for Zwille protein
Length = 3323
Score = 192 bits (413), Expect(2) = 8e-055
Identities = 73/89 (82%), Positives = 80/89 (89%)
Frame = +1 / +3
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTAD +Q+LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 2745 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSIVPPAY 2924
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGT 267
YAHLAAFRARFY+EPE+ ++ S T
Sbjct: 2925 YAHLAAFRARFYLEPEIMQDNGSPGKKNT 3011
Score = 102 bits (217), Expect(2) = 1e-026
Identities = 56/76 (73%), Positives = 57/76 (75%)
Frame = -1 / -2
Query: 230 ISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRTW**AG 51
ISGS R A*YAGGT ET+RVHRA*V*QRL V I SAVKLFSSQRTW* AG
Sbjct: 2974 ISGSR*KRARNAAR*A*YAGGTIETDRVHRA*V*QRLLVRD*IPSAVKLFSSQRTW*CAG 2795
Query: 50 LLVPWIPA*LQR*KSN 3
LLVP IPA LQR*KSN
Sbjct: 2794 LLVP*IPAWLQR*KSN 2747
Score = 44.1 bits (90), Expect(2) = 8e-055
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +1 / +3
Query: 280 VKPLPAVKEKVKRVMFYC*R 339
VKPLPA+KE VKRVMFYC*+
Sbjct: 3039 VKPLPALKENVKRVMFYC*K 3098
Score = 39.6 bits (80), Expect(2) = 1e-026
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -1 / -2
Query: 332 Q*NITLFTFSFTAGRGFT 279
Q*NITLFTFSF AG+GFT
Sbjct: 3091 Q*NITLFTFSFKAGKGFT 3038
>emb|AX505737.1| Sequence 432 from Patent WO0216655
Length = 2967
Score = 192 bits (413), Expect(2) = 2e-054
Identities = 73/89 (82%), Positives = 80/89 (89%)
Frame = +1 / +1
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTAD +Q+LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 2617 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSIVPPAY 2796
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGT 267
YAHLAAFRARFY+EPE+ ++ S T
Sbjct: 2797 YAHLAAFRARFYLEPEIMQDNGSPGKKNT 2883
Score = 102 bits (217), Expect(2) = 1e-026
Identities = 56/76 (73%), Positives = 57/76 (75%)
Frame = -1 / -2
Query: 230 ISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRTW**AG 51
ISGS R A*YAGGT ET+RVHRA*V*QRL V I SAVKLFSSQRTW* AG
Sbjct: 2846 ISGSR*KRARNAAR*A*YAGGTIETDRVHRA*V*QRLLVRD*IPSAVKLFSSQRTW*CAG 2667
Query: 50 LLVPWIPA*LQR*KSN 3
LLVP IPA LQR*KSN
Sbjct: 2666 LLVP*IPAWLQR*KSN 2619
Score = 43.2 bits (88), Expect(2) = 2e-054
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +1 / +1
Query: 280 VKPLPAVKEKVKRVMFYC* 336
VKPLPA+KE VKRVMFYC*
Sbjct: 2911 VKPLPALKENVKRVMFYC* 2967
Score = 39.6 bits (80), Expect(2) = 1e-026
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -1 / -2
Query: 332 Q*NITLFTFSFTAGRGFT 279
Q*NITLFTFSF AG+GFT
Sbjct: 2963 Q*NITLFTFSFKAGKGFT 2910
>ref|NM_179779.1| Arabidopsis thaliana unknown protein AT2G27880 mRNA, complete cds
Length = 2994
Score = 184 bits (396), Expect(2) = 4e-051
Identities = 72/91 (79%), Positives = 81/91 (89%)
Frame = +1 / +1
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYL SHAGIQGTSRPAHYHVL DEN FTAD++Q LTNNLCYTYARCT+SVS+VPPAY
Sbjct: 2653 EFDFYLNSHAGIQGTSRPAHYHVLLDENGFTADQLQMLTNNLCYTYARCTKSVSIVPPAY 2832
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNG 273
YAHLAAFRAR+YME EMS+ +S+S + T G
Sbjct: 2833 YAHLAAFRARYYMESEMSDGGSSRSRSSTTG 2925
Score = 39.6 bits (80), Expect(2) = 4e-051
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +1 / +1
Query: 247 SKSSNGTNGGLVKPLPAVKEKVKRVMFYC* 336
S+SS G ++ LPA+K+ VK VMFYC*
Sbjct: 2905 SRSSTTGVGQVISQLPAIKDNVKEVMFYC* 2994
>emb|BX821460.1|CNS0A8DH Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL43ZD04 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 1092
Score = 184 bits (396), Expect(2) = 4e-051
Identities = 72/91 (79%), Positives = 81/91 (89%)
Frame = +1 / +2
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYL SHAGIQGTSRPAHYHVL DEN FTAD++Q LTNNLCYTYARCT+SVS+VPPAY
Sbjct: 569 EFDFYLNSHAGIQGTSRPAHYHVLLDENGFTADQLQMLTNNLCYTYARCTKSVSIVPPAY 748
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNG 273
YAHLAAFRAR+YME EMS+ +S+S + T G
Sbjct: 749 YAHLAAFRARYYMESEMSDGGSSRSRSSTTG 841
Score = 39.6 bits (80), Expect(2) = 4e-051
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +1 / +2
Query: 247 SKSSNGTNGGLVKPLPAVKEKVKRVMFYC* 336
S+SS G ++ LPA+K+ VK VMFYC*
Sbjct: 821 SRSSTTGVGQVISQLPAIKDNVKEVMFYC* 910
>gb|BX838222.1|BX838222 BX838222 Arabidopsis thaliana Silique Col-0 Arabidopsis thaliana
cDNA clone GSLTSIL68ZF03 5PRIM, mRNA sequence
Length = 616
Score = 184 bits (396), Expect(2) = 4e-051
Identities = 72/91 (79%), Positives = 81/91 (89%)
Frame = +1 / +1
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYL SHAGIQGTSRPAHYHVL DEN FTAD++Q LTNNLCYTYARCT+SVS+VPPAY
Sbjct: 58 EFDFYLNSHAGIQGTSRPAHYHVLLDENGFTADQLQMLTNNLCYTYARCTKSVSIVPPAY 237
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNG 273
YAHLAAFRAR+YME EMS+ +S+S + T G
Sbjct: 238 YAHLAAFRARYYMESEMSDGGSSRSRSSTTG 330
Score = 39.6 bits (80), Expect(2) = 4e-051
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +1 / +1
Query: 247 SKSSNGTNGGLVKPLPAVKEKVKRVMFYC* 336
S+SS G ++ LPA+K+ VK VMFYC*
Sbjct: 310 SRSSTTGVGQVISQLPAIKDNVKEVMFYC* 399
>gb|AV548172.1|AV548172 AV548172 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZL48g02F 3', mRNA sequence
Length = 540
Score = 182 bits (391), Expect(2) = 4e-051
Identities = 70/86 (81%), Positives = 77/86 (89%)
Frame = +1 / -3
Query: 19 CSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAYYAHLAA 198
CSHAGIQGTSRPAHYHVLWDENNFTAD +Q+LTNNLCYTYARCTRSVS+VPPAYYAHLAA
Sbjct: 538 CSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAA 359
Query: 199 FRARFYMEPEMSENQTSKSSNGTNGG 276
FRARFYMEPE S++ + S + GG
Sbjct: 358 FRARFYMEPETSDSGSMASGSMARGG 281
Score = 95.9 bits (203), Expect(2) = 6e-023
Identities = 54/86 (62%), Positives = 56/86 (65%)
Frame = -1 / +3
Query: 275 PPFVPLELFDVWFSDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISS 96
PP L L SD+SGSM RCA*YAGGT ETERVH A V* +L V S
Sbjct: 282 PPRAMLPLAIEPLSDVSGSM*NRALKAARCA*YAGGTIETERVHLAYV*HKLLVRD*SPS 461
Query: 95 AVKLFSSQRTW**AGLLVPWIPA*LQ 18
AVKLFSSQRTW**AG VP IPA*LQ
Sbjct: 462 AVKLFSSQRTW**AGREVP*IPA*LQ 539
Score = 41.8 bits (85), Expect(2) = 4e-051
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / -3
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KE VKRVMFYC*
Sbjct: 235 VRPLPALKENVKRVMFYC* 179
Score = 33.6 bits (67), Expect(2) = 6e-023
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -1 / +3
Query: 335 QQ*NITLFTFSFTAGRGFT 279
QQ*N+T FTFSF AG G T
Sbjct: 180 QQ*NMTRFTFSFRAGSGLT 236
>gb|AV523806.1|AV523806 AV523806 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZL40f03F 3', mRNA
sequence
Length = 447
Score = 193 bits (416), Expect = 4e-048
Identities = 74/87 (85%), Positives = 81/87 (93%)
Frame = +1 / -1
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTAD +Q+LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 312 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCYTYARCTRSVSIVPPAY 133
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSN 261
YAHLAAFRARFYMEPE S++ + S +
Sbjct: 132 YAHLAAFRARFYMEPETSDSGSMASGS 52
Score = 103 bits (219), Expect = 6e-021
Identities = 55/78 (70%), Positives = 57/78 (73%)
Frame = -1 / +2
Query: 236 SDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRTW** 57
SD+SGSM RCA*YAGGT ETERVH A V* +L V SAVKLFSSQRTW**
Sbjct: 77 SDVSGSM*NRALKAARCA*YAGGTIETERVHLAYV*HKLLVRD*SPSAVKLFSSQRTW** 256
Query: 56 AGLLVPWIPA*LQR*KSN 3
AG VP IPA*LQR*KSN
Sbjct: 257 AGREVP*IPA*LQR*KSN 310
>gb|AV529891.1|AV529891 AV529891 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZL51c02R 5', mRNA
sequence
Length = 528
Score = 170 bits (366), Expect(2) = 1e-047
Identities = 66/82 (80%), Positives = 73/82 (89%)
Frame = +1 / -1
Query: 31 GIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRAR 210
GIQGTSRPAHYHVLWDENNFTAD +Q+LTNNLCYTYARCTRSVS+VPPAYYAHLAAFRAR
Sbjct: 528 GIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRAR 349
Query: 211 FYMEPEMSENQTSKSSNGTNGG 276
FYMEPE S++ + S + GG
Sbjct: 348 FYMEPETSDSGSMASGSMARGG 283
Score = 41.8 bits (85), Expect(2) = 1e-047
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / -1
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KE VKRVMFYC*
Sbjct: 237 VRPLPALKENVKRVMFYC* 181
>gb|CB260762.1|CB260762 67-E009520-012-003-F21-T7R MPIZ-ADIS-012 Arabidopsis thaliana cDNA
clone MPIZp769F213Q 5-PRIME, mRNA sequence
Length = 532
Score = 192 bits (413), Expect = 1e-047
Identities = 73/89 (82%), Positives = 80/89 (89%)
Frame = +1 / +3
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTAD +Q+LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 231 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSIVPPAY 410
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGT 267
YAHLAAFRARFY+EPE+ ++ S T
Sbjct: 411 YAHLAAFRARFYLEPEIMQDNGSPGKKNT 497
>gb|AV548086.1|AV548086 AV548086 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZL46g10F 3', mRNA sequence
Length = 511
Score = 160 bits (345), Expect(2) = 8e-045
Identities = 62/78 (79%), Positives = 69/78 (88%)
Frame = +1 / -1
Query: 43 TSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYME 222
TSRPAHYHVLWDENNFTAD +Q+LTNNLCYTYARCTRSVS+VPPAYYAHLAAFRARFYME
Sbjct: 511 TSRPAHYHVLWDENNFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYME 332
Query: 223 PEMSENQTSKSSNGTNGG 276
PE S++ + S + GG
Sbjct: 331 PETSDSGSMASGSMARGG 278
Score = 41.8 bits (85), Expect(2) = 8e-045
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / -1
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KE VKRVMFYC*
Sbjct: 232 VRPLPALKENVKRVMFYC* 176
>gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom arm complete sequence
Length = 14668883
Score = 155 bits (334), Expect(2) = 1e-039
Identities = 55/90 (61%), Positives = 69/90 (76%)
Frame = +1 / -3
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSH G++GTSRP HYH+LWDEN FT+DE+Q L NLCYT+ RCT+ +S+VPPAY
Sbjct: 10344105 EFDFYLCSHLGVKGTSRPTHYHILWDENEFTSDELQRLVYNLCYTFVRCTKPISIVPPAY 10343926
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTN 270
YAHLAA+R R Y+E N S + + +
Sbjct: 10343925 YAHLAAYRGRLYIERSSESNGGSMNPSSVS 10343836
Score = 82.6 bits (174), Expect(5) = 1e-044
Identities = 30/33 (90%), Positives = 32/33 (96%)
Frame = +1 / -1
Query: 37 QGTSRPAHYHVLWDENNFTADEMQTLTNNLCYT 135
QGTSRPAHYHVLWDENNFTAD +Q+LTNNLCYT
Sbjct: 2246093 QGTSRPAHYHVLWDENNFTADGLQSLTNNLCYT 2245995
Score = 65.2 bits (136), Expect(5) = 1e-044
Identities = 26/38 (68%), Positives = 30/38 (78%)
Frame = +1 / -2
Query: 163 VVPPAYYAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
VVPPAYYAHLAAFRARFYMEPE S++ + S + GG
Sbjct: 2245762 VVPPAYYAHLAAFRARFYMEPETSDSGSMASGSMARGG 2245649
Score = 41.8 bits (85), Expect(5) = 1e-044
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / -2
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KE VKRVMFYC*
Sbjct: 2245603 VRPLPALKENVKRVMFYC* 2245547
Score = 36.8 bits (74), Expect(5) = 1e-044
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +1 / -1
Query: 1 EFDFYLCSHAGIQ 39
EFDFYLCSHAGIQ
Sbjct: 2246207 EFDFYLCSHAGIQ 2246169
Score = 29.5 bits (58), Expect(2) = 1e-039
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1 / -3
Query: 286 PLPAVKEKVKRVMFYC* 336
PLP + + VK +MFYC*
Sbjct: 10343811 PLPKLSDNVKNLMFYC* 10343761
Score = 28.6 bits (56), Expect(5) = 1e-044
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1 / -3
Query: 130 YTYARCTRSVSV 165
Y YARCTRSVS+
Sbjct: 2245899 YRYARCTRSVSI 2245864
>gb|AC007932.3|F11A17 Arabidopsis thaliana chromosome 1 BAC F11A17 sequence, complete
sequence
Length = 102078
Score = 82.6 bits (174), Expect(5) = 2e-044
Identities = 30/33 (90%), Positives = 32/33 (96%)
Frame = +1 / +1
Query: 37 QGTSRPAHYHVLWDENNFTADEMQTLTNNLCYT 135
QGTSRPAHYHVLWDENNFTAD +Q+LTNNLCYT
Sbjct: 17233 QGTSRPAHYHVLWDENNFTADGLQSLTNNLCYT 17331
Score = 65.2 bits (136), Expect(5) = 2e-044
Identities = 26/38 (68%), Positives = 30/38 (78%)
Frame = +1 / +2
Query: 163 VVPPAYYAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
VVPPAYYAHLAAFRARFYMEPE S++ + S + GG
Sbjct: 17564 VVPPAYYAHLAAFRARFYMEPETSDSGSMASGSMARGG 17677
Score = 41.8 bits (85), Expect(5) = 2e-044
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / +2
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KE VKRVMFYC*
Sbjct: 17723 VRPLPALKENVKRVMFYC* 17779
Score = 36.8 bits (74), Expect(5) = 2e-044
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +1 / +1
Query: 1 EFDFYLCSHAGIQ 39
EFDFYLCSHAGIQ
Sbjct: 17119 EFDFYLCSHAGIQ 17157
Score = 28.6 bits (56), Expect(5) = 2e-044
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1 / +3
Query: 130 YTYARCTRSVSV 165
Y YARCTRSVS+
Sbjct: 17427 YRYARCTRSVSI 17462
>gb|AC020889.3|AC020889 Genomic sequence for Arabidopsis thaliana BAC T1N15 from chromosome
I, complete sequence
Length = 95295
Score = 82.6 bits (174), Expect(5) = 2e-044
Identities = 30/33 (90%), Positives = 32/33 (96%)
Frame = +1 / -3
Query: 37 QGTSRPAHYHVLWDENNFTADEMQTLTNNLCYT 135
QGTSRPAHYHVLWDENNFTAD +Q+LTNNLCYT
Sbjct: 1723 QGTSRPAHYHVLWDENNFTADGLQSLTNNLCYT 1625
Score = 65.2 bits (136), Expect(5) = 2e-044
Identities = 26/38 (68%), Positives = 30/38 (78%)
Frame = +1 / -1
Query: 163 VVPPAYYAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
VVPPAYYAHLAAFRARFYMEPE S++ + S + GG
Sbjct: 1392 VVPPAYYAHLAAFRARFYMEPETSDSGSMASGSMARGG 1279
Score = 41.8 bits (85), Expect(5) = 2e-044
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / -1
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KE VKRVMFYC*
Sbjct: 1233 VRPLPALKENVKRVMFYC* 1177
Score = 36.8 bits (74), Expect(5) = 2e-044
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +1 / -3
Query: 1 EFDFYLCSHAGIQ 39
EFDFYLCSHAGIQ
Sbjct: 1837 EFDFYLCSHAGIQ 1799
Score = 28.6 bits (56), Expect(5) = 2e-044
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1 / -2
Query: 130 YTYARCTRSVSV 165
Y YARCTRSVS+
Sbjct: 1529 YRYARCTRSVSI 1494
>gb|AY600524.1| Arabidopsis thaliana hypothetical protein (At1g48405) mRNA,
complete cds
Length = 1462
Score = 156 bits (336), Expect(2) = 1e-043
Identities = 60/76 (78%), Positives = 67/76 (88%)
Frame = +1 / +3
Query: 49 RPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPE 228
RPAHYHVLWDENNFTAD +Q+LTNNLCYTYARCTRSVS+VPPAYYAHLAAFRARFYMEPE
Sbjct: 3 RPAHYHVLWDENNFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPE 182
Query: 229 MSENQTSKSSNGTNGG 276
S++ + S + GG
Sbjct: 183 TSDSGSMASGSMARGG 230
Score = 41.8 bits (85), Expect(2) = 1e-043
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / +3
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KE VKRVMFYC*
Sbjct: 276 VRPLPALKENVKRVMFYC* 332
>gb|AC005824.3| Arabidopsis thaliana chromosome 2 clone F15K20 map B68, complete
sequence
Length = 118196
Score = 86.3 bits (182), Expect(4) = 4e-042
Identities = 33/46 (71%), Positives = 40/46 (86%)
Frame = +1 / -3
Query: 136 YARCTRSVSVVPPAYYAHLAAFRARFYMEPEMSENQTSKSSNGTNG 273
YARCT+SVS+VPPAYYAHLAAFRAR+YME EMS+ +S+S + T G
Sbjct: 3171 YARCTKSVSIVPPAYYAHLAAFRARYYMESEMSDGGSSRSRSSTTG 3034
Score = 72.5 bits (152), Expect(4) = 4e-042
Identities = 27/32 (84%), Positives = 29/32 (90%)
Frame = +1 / -3
Query: 40 GTSRPAHYHVLWDENNFTADEMQTLTNNLCYT 135
GTSRPAHYHVL DEN FTAD++Q LTNNLCYT
Sbjct: 3354 GTSRPAHYHVLLDENGFTADQLQMLTNNLCYT 3259
Score = 39.6 bits (80), Expect(4) = 4e-042
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +1 / -3
Query: 247 SKSSNGTNGGLVKPLPAVKEKVKRVMFYC* 336
S+SS G ++ LPA+K+ VK VMFYC*
Sbjct: 3054 SRSSTTGVGQVISQLPAIKDNVKEVMFYC* 2965
Score = 31.3 bits (62), Expect(4) = 4e-042
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1 / -1
Query: 1 EFDFYLCSHAGIQ 39
EFDFYL SHAGIQ
Sbjct: 3479 EFDFYLNSHAGIQ 3441
>gb|AC006929.4| Arabidopsis thaliana chromosome 2 clone T1E2 map mi54, complete
sequence
Length = 94884
Score = 86.3 bits (182), Expect(4) = 4e-042
Identities = 33/46 (71%), Positives = 40/46 (86%)
Frame = +1 / -3
Query: 136 YARCTRSVSVVPPAYYAHLAAFRARFYMEPEMSENQTSKSSNGTNG 273
YARCT+SVS+VPPAYYAHLAAFRAR+YME EMS+ +S+S + T G
Sbjct: 84514 YARCTKSVSIVPPAYYAHLAAFRARYYMESEMSDGGSSRSRSSTTG 84377
Score = 72.5 bits (152), Expect(4) = 4e-042
Identities = 27/32 (84%), Positives = 29/32 (90%)
Frame = +1 / -3
Query: 40 GTSRPAHYHVLWDENNFTADEMQTLTNNLCYT 135
GTSRPAHYHVL DEN FTAD++Q LTNNLCYT
Sbjct: 84697 GTSRPAHYHVLLDENGFTADQLQMLTNNLCYT 84602
Score = 39.6 bits (80), Expect(4) = 4e-042
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +1 / -3
Query: 247 SKSSNGTNGGLVKPLPAVKEKVKRVMFYC* 336
S+SS G ++ LPA+K+ VK VMFYC*
Sbjct: 84397 SRSSTTGVGQVISQLPAIKDNVKEVMFYC* 84308
Score = 31.3 bits (62), Expect(4) = 4e-042
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1 / -1
Query: 1 EFDFYLCSHAGIQ 39
EFDFYL SHAGIQ
Sbjct: 84822 EFDFYLNSHAGIQ 84784
>gb|AV534003.1|AV534003 AV534003 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB072b01F 3', mRNA sequence
Length = 512
Score = 151 bits (324), Expect(2) = 6e-042
Identities = 58/74 (78%), Positives = 65/74 (87%)
Frame = +1 / -2
Query: 55 AHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPEMS 234
AHYHVLWDENNFTAD +Q+LTNNLCYTYARCTRSVS+VPPAYYAHLAAFRARFYMEPE S
Sbjct: 511 AHYHVLWDENNFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETS 332
Query: 235 ENQTSKSSNGTNGG 276
++ + S + GG
Sbjct: 331 DSGSMASGSMARGG 290
Score = 41.8 bits (85), Expect(2) = 6e-042
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / -2
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KE VKRVMFYC*
Sbjct: 244 VRPLPALKENVKRVMFYC* 188
>gb|AV532952.1|AV532952 AV532952 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB053a03F 3', mRNA sequence
Length = 507
Score = 151 bits (324), Expect(2) = 6e-042
Identities = 58/74 (78%), Positives = 65/74 (87%)
Frame = +1 / -2
Query: 55 AHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPEMS 234
AHYHVLWDENNFTAD +Q+LTNNLCYTYARCTRSVS+VPPAYYAHLAAFRARFYMEPE S
Sbjct: 506 AHYHVLWDENNFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETS 327
Query: 235 ENQTSKSSNGTNGG 276
++ + S + GG
Sbjct: 326 DSGSMASGSMARGG 285
Score = 41.8 bits (85), Expect(2) = 6e-042
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / -2
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KE VKRVMFYC*
Sbjct: 239 VRPLPALKENVKRVMFYC* 183
>gb|AV560716.1|AV560716 AV560716 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ139e07F 3', mRNA sequence
Length = 505
Score = 151 bits (324), Expect(2) = 6e-042
Identities = 58/74 (78%), Positives = 65/74 (87%)
Frame = +1 / -3
Query: 55 AHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPEMS 234
AHYHVLWDENNFTAD +Q+LTNNLCYTYARCTRSVS+VPPAYYAHLAAFRARFYMEPE S
Sbjct: 503 AHYHVLWDENNFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETS 324
Query: 235 ENQTSKSSNGTNGG 276
++ + S + GG
Sbjct: 323 DSGSMASGSMARGG 282
Score = 41.8 bits (85), Expect(2) = 6e-042
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / -3
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KE VKRVMFYC*
Sbjct: 236 VRPLPALKENVKRVMFYC* 180
>emb|AJ522260.1|ATH522260 Arabidopsis thaliana T-DNA flanking sequence, left border, clone
288C04
Length = 545
Score = 85.4 bits (180), Expect(4) = 2e-041
Identities = 33/46 (71%), Positives = 40/46 (86%)
Frame = +1 / +3
Query: 136 YARCTRSVSVVPPAYYAHLAAFRARFYMEPEMSENQTSKSSNGTNG 273
YARCT+SVS+VPPAYYAHLAAFRAR+YME EMS+ +S+S + T G
Sbjct: 312 YARCTKSVSIVPPAYYAHLAAFRARYYMESEMSDGGSSRSRSTTTG 449
Score = 72.5 bits (152), Expect(4) = 2e-041
Identities = 27/32 (84%), Positives = 29/32 (90%)
Frame = +1 / +3
Query: 40 GTSRPAHYHVLWDENNFTADEMQTLTNNLCYT 135
GTSRPAHYHVL DEN FTAD++Q LTNNLCYT
Sbjct: 129 GTSRPAHYHVLLDENGFTADQLQMLTNNLCYT 224
Score = 38.2 bits (77), Expect(4) = 2e-041
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +1 / +3
Query: 247 SKSSNGTNGGLVKPLPAVKEKVKRVMFYC* 336
S+S+ G ++ LPA+K+ VK VMFYC*
Sbjct: 429 SRSTTTGVGQVISQLPAIKDNVKEVMFYC* 518
Score = 31.3 bits (62), Expect(4) = 2e-041
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1 / +1
Query: 1 EFDFYLCSHAGIQ 39
EFDFYL SHAGIQ
Sbjct: 4 EFDFYLNSHAGIQ 42
>gb|B25866.1|B25866 F28J22TRB IGF Arabidopsis thaliana genomic clone F28J22, DNA
sequence
Length = 535
Score = 86.3 bits (182), Expect(4) = 5e-041
Identities = 33/46 (71%), Positives = 40/46 (86%)
Frame = +1 / +1
Query: 136 YARCTRSVSVVPPAYYAHLAAFRARFYMEPEMSENQTSKSSNGTNG 273
YARCT+SVS+VPPAYYAHLAAFRAR+YME EMS+ +S+S + T G
Sbjct: 310 YARCTKSVSIVPPAYYAHLAAFRARYYMESEMSDGGSSRSRSSTTG 447
Score = 72.5 bits (152), Expect(4) = 5e-041
Identities = 27/32 (84%), Positives = 29/32 (90%)
Frame = +1 / +1
Query: 40 GTSRPAHYHVLWDENNFTADEMQTLTNNLCYT 135
GTSRPAHYHVL DEN FTAD++Q LTNNLCYT
Sbjct: 127 GTSRPAHYHVLLDENGFTADQLQMLTNNLCYT 222
Score = 35.9 bits (72), Expect(4) = 5e-041
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +1 / +1
Query: 247 SKSSNGTNGGLVKPLPAVKEKVKRVMFYC* 336
S+SS G ++ LPA+K+ VK VM YC*
Sbjct: 427 SRSSTTGVGQVISQLPAIKDNVKEVMCYC* 516
Score = 31.3 bits (62), Expect(4) = 5e-041
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1 / +2
Query: 1 EFDFYLCSHAGIQ 39
EFDFYL SHAGIQ
Sbjct: 2 EFDFYLNSHAGIQ 40
>dbj|AB026651.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQD19
Length = 87286
Score = 103 bits (220), Expect(3) = 2e-040
Identities = 40/50 (80%), Positives = 44/50 (88%)
Frame = +1 / +1
Query: 16 LCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSV 165
+C I GTSRPAHYHVLWDENNFTAD +Q+LTNNLCYTYARCTRSVS+
Sbjct: 71023 VCVCCMI*GTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSI 71172
Score = 58.3 bits (121), Expect(3) = 2e-040
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = +1 / +3
Query: 166 VPPAYYAHLAAFRARFYMEPEMSENQTSKSSNGT 267
VPPAYYAHLAAFRARFY+EPE+ ++ S T
Sbjct: 71268 VPPAYYAHLAAFRARFYLEPEIMQDNGSPGKKNT 71369
Score = 44.1 bits (90), Expect(3) = 2e-040
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +1 / +3
Query: 280 VKPLPAVKEKVKRVMFYC*R 339
VKPLPA+KE VKRVMFYC*+
Sbjct: 71397 VKPLPALKENVKRVMFYC*K 71456
>gb|AF154272.1|AF154272 Arabidopsis thaliana PINHEAD (PINHEAD) gene, complete cds
Length = 5895
Score = 103 bits (220), Expect(3) = 2e-040
Identities = 40/50 (80%), Positives = 44/50 (88%)
Frame = +1 / +2
Query: 16 LCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSV 165
+C I GTSRPAHYHVLWDENNFTAD +Q+LTNNLCYTYARCTRSVS+
Sbjct: 5234 VCVCCMI*GTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSI 5383
Score = 58.3 bits (121), Expect(3) = 2e-040
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = +1 / +1
Query: 166 VPPAYYAHLAAFRARFYMEPEMSENQTSKSSNGT 267
VPPAYYAHLAAFRARFY+EPE+ ++ S T
Sbjct: 5479 VPPAYYAHLAAFRARFYLEPEIMQDNGSPGKKNT 5580
Score = 44.1 bits (90), Expect(3) = 2e-040
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +1 / +1
Query: 280 VKPLPAVKEKVKRVMFYC*R 339
VKPLPA+KE VKRVMFYC*+
Sbjct: 5608 VKPLPALKENVKRVMFYC*K 5667
>gb|AC073178.9|AC073178 Arabidopsis thaliana chromosome 1 BAC F10D13 genomic sequence, complete
sequence
Length = 107214
Score = 155 bits (334), Expect(2) = 1e-039
Identities = 55/90 (61%), Positives = 69/90 (76%)
Frame = +1 / -2
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSH G++GTSRP HYH+LWDEN FT+DE+Q L NLCYT+ RCT+ +S+VPPAY
Sbjct: 45230 EFDFYLCSHLGVKGTSRPTHYHILWDENEFTSDELQRLVYNLCYTFVRCTKPISIVPPAY 45051
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTN 270
YAHLAA+R R Y+E N S + + +
Sbjct: 45050 YAHLAAYRGRLYIERSSESNGGSMNPSSVS 44961
Score = 29.5 bits (58), Expect(2) = 1e-039
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1 / -2
Query: 286 PLPAVKEKVKRVMFYC* 336
PLP + + VK +MFYC*
Sbjct: 44936 PLPKLSDNVKNLMFYC* 44886
>ref|NM_105611.3| Arabidopsis thaliana AGO7 (ARGONAUTE7) AT1G69440 (AGO7) mRNA,
complete cds
Length = 3163
Score = 155 bits (334), Expect(2) = 1e-039
Identities = 55/90 (61%), Positives = 69/90 (76%)
Frame = +1 / +1
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSH G++GTSRP HYH+LWDEN FT+DE+Q L NLCYT+ RCT+ +S+VPPAY
Sbjct: 2779 EFDFYLCSHLGVKGTSRPTHYHILWDENEFTSDELQRLVYNLCYTFVRCTKPISIVPPAY 2958
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTN 270
YAHLAA+R R Y+E N S + + +
Sbjct: 2959 YAHLAAYRGRLYIERSSESNGGSMNPSSVS 3048
Score = 29.5 bits (58), Expect(2) = 1e-039
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1 / +1
Query: 286 PLPAVKEKVKRVMFYC* 336
PLP + + VK +MFYC*
Sbjct: 3073 PLPKLSDNVKNLMFYC* 3123
>gb|AY394564.1| Arabidopsis thaliana ZIPPY mRNA, complete cds
Length = 3161
Score = 155 bits (334), Expect(2) = 1e-039
Identities = 55/90 (61%), Positives = 69/90 (76%)
Frame = +1 / +1
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSH G++GTSRP HYH+LWDEN FT+DE+Q L NLCYT+ RCT+ +S+VPPAY
Sbjct: 2779 EFDFYLCSHLGVKGTSRPTHYHILWDENEFTSDELQRLVYNLCYTFVRCTKPISIVPPAY 2958
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTN 270
YAHLAA+R R Y+E N S + + +
Sbjct: 2959 YAHLAAYRGRLYIERSSESNGGSMNPSSVS 3048
Score = 29.5 bits (58), Expect(2) = 1e-039
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1 / +1
Query: 286 PLPAVKEKVKRVMFYC* 336
PLP + + VK +MFYC*
Sbjct: 3073 PLPKLSDNVKNLMFYC* 3123
>gb|AV556836.1|AV556836 AV556836 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ053e11F 3', mRNA sequence
Length = 551
Score = 155 bits (334), Expect(2) = 1e-039
Identities = 55/90 (61%), Positives = 69/90 (76%)
Frame = +1 / -2
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSH G++GTSRP HYH+LWDEN FT+DE+Q L NLCYT+ RCT+ +S+VPPAY
Sbjct: 382 EFDFYLCSHLGVKGTSRPTHYHILWDENEFTSDELQRLVYNLCYTFVRCTKPISIVPPAY 203
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTN 270
YAHLAA+R R Y+E N S + + +
Sbjct: 202 YAHLAAYRGRLYIERSSESNGGSMNPSSVS 113
Score = 29.5 bits (58), Expect(2) = 1e-039
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1 / -2
Query: 286 PLPAVKEKVKRVMFYC* 336
PLP + + VK +MFYC*
Sbjct: 88 PLPKLSDNVKNLMFYC* 38
>gb|BP795190.1|BP795190 BP795190 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-64-A11 3',
mRNA sequence
Length = 499
Score = 142 bits (305), Expect(2) = 2e-039
Identities = 55/71 (77%), Positives = 62/71 (87%)
Frame = +1 / -1
Query: 64 HVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPEMSENQ 243
HVLWDENNFTAD +Q+LTNNLCYTYARCTRSVS+VPPAYYAHLAAFRARFYMEPE S++
Sbjct: 499 HVLWDENNFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSG 320
Query: 244 TSKSSNGTNGG 276
+ S + GG
Sbjct: 319 SMASGSMARGG 287
Score = 41.8 bits (85), Expect(2) = 2e-039
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / -1
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KE VKRVMFYC*
Sbjct: 241 VRPLPALKENVKRVMFYC* 185
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 155 bits (334), Expect = 9e-037
Identities = 55/90 (61%), Positives = 69/90 (76%)
Frame = +1 / -2
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSH G++GTSRP HYH+LWDEN FT+DE+Q L NLCYT+ RCT+ +S+VPPAY
Sbjct: 26105572 EFDFYLCSHLGVKGTSRPTHYHILWDENEFTSDELQRLVYNLCYTFVRCTKPISIVPPAY 26105393
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTN 270
YAHLAA+R R Y+E N S + + +
Sbjct: 26105392 YAHLAAYRGRLYIERSSESNGGSMNPSSVS 26105303
Score = 121 bits (258), Expect = 3e-026
Identities = 44/79 (55%), Positives = 56/79 (70%)
Frame = +1 / +2
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
E+DFYLCSH G GTS+P HY+ LWDE FT+D++Q L +C+T+ RCT+ VS+VPP Y
Sbjct: 11184722 EYDFYLCSHHGGIGTSKPTHYYTLWDELGFTSDQVQKLIFEMCFTFTRCTKPVSLVPPVY 11184901
Query: 181 YAHLAAFRARFYMEPEMSE 237
YA + AFR R Y E E
Sbjct: 11184902 YADMVAFRGRMYHEASSRE 11184958
Score = 104 bits (222), Expect = 2e-021
Identities = 40/90 (44%), Positives = 59/90 (65%)
Frame = +1 / +1
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
E+DFYLCS G GTS+P HY+VL DE F ++++Q L +LC+T+ RCT+ V++VPP
Sbjct: 11191927 EYDFYLCSQHGAIGTSKPTHYYVLSDEIGFNSNQIQKLIFDLCFTFTRCTKPVALVPPVS 11192106
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTN 270
YA AA R R Y E + + + +S ++
Sbjct: 11192107 YADKAASRGRVYYEASLMKKNSKQSRGASS 11192196
>gb|BH904361.1|BH904361 SALK_104357.53.75.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_104357.53.75.x,
DNA sequence
Length = 429
Score = 86.3 bits (182), Expect(3) = 1e-036
Identities = 33/46 (71%), Positives = 40/46 (86%)
Frame = +1 / -1
Query: 136 YARCTRSVSVVPPAYYAHLAAFRARFYMEPEMSENQTSKSSNGTNG 273
YARCT+SVS+VPPAYYAHLAAFRAR+YME EMS+ +S+S + T G
Sbjct: 228 YARCTKSVSIVPPAYYAHLAAFRARYYMESEMSDGGSSRSRSSTTG 91
Score = 67.5 bits (141), Expect(3) = 1e-036
Identities = 26/32 (81%), Positives = 28/32 (87%)
Frame = +1 / -1
Query: 40 GTSRPAHYHVLWDENNFTADEMQTLTNNLCYT 135
GTSRPAHYHVL DEN FTAD++Q LTNNL YT
Sbjct: 411 GTSRPAHYHVLLDENGFTADQLQMLTNNLXYT 316
Score = 39.6 bits (80), Expect(3) = 1e-036
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +1 / -1
Query: 247 SKSSNGTNGGLVKPLPAVKEKVKRVMFYC* 336
S+SS G ++ LPA+K+ VK VMFYC*
Sbjct: 111 SRSSTTGVGQVISQLPAIKDNVKEVMFYC* 22
>gb|BP618364.1|BP618364 BP618364 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-28-A09 3',
mRNA sequence
Length = 445
Score = 130 bits (278), Expect(2) = 6e-035
Identities = 49/53 (92%), Positives = 52/53 (98%)
Frame = +1 / -2
Query: 61 YHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYM 219
YHVLWDENNFTAD +Q+LTNNLCYTYARCTRSVS+VPPAYYAHLAAFRARFYM
Sbjct: 444 YHVLWDENNFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYM 286
Score = 39.6 bits (80), Expect(2) = 6e-035
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = +1 / -1
Query: 283 KPLPAVKEKVKRVMFYC* 336
+PLPA+KE VKRVMFYC*
Sbjct: 184 EPLPALKENVKRVMFYC* 131
>gb|BP619936.1|BP619936 BP619936 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-35-C16 3',
mRNA sequence
Length = 431
Score = 127 bits (272), Expect(2) = 8e-035
Identities = 50/66 (75%), Positives = 57/66 (86%)
Frame = +1 / -2
Query: 79 ENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPEMSENQTSKSS 258
ENNFTAD +Q+LTNNLCYTYARCTRSVS+VPPAYYAHLAAFRARFYMEPE S++ + S
Sbjct: 430 ENNFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMASG 251
Query: 259 NGTNGG 276
+ GG
Sbjct: 250 SMARGG 233
Score = 41.8 bits (85), Expect(2) = 8e-035
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / -2
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KE VKRVMFYC*
Sbjct: 187 VRPLPALKENVKRVMFYC* 131
>gb|BH617562.1|BH617562 SALK_037270 Arabidopsis thaliana TDNA insertion lines Arabidopsis
thaliana genomic clone SALK_037270, DNA sequence
Length = 424
Score = 86.3 bits (182), Expect(2) = 3e-030
Identities = 33/46 (71%), Positives = 40/46 (86%)
Frame = +1 / -3
Query: 136 YARCTRSVSVVPPAYYAHLAAFRARFYMEPEMSENQTSKSSNGTNG 273
YARCT+SVS+VPPAYYAHLAAFRAR+YME EMS+ +S+S + T G
Sbjct: 245 YARCTKSVSIVPPAYYAHLAAFRARYYMESEMSDGGSSRSRSSTTG 108
Score = 67.5 bits (141), Expect(2) = 3e-030
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = +1 / -3
Query: 46 SRPAHYHVLWDENNFTADEMQTLTNNLCYT 135
SRPAHYHVL DEN FTAD++Q LTNNLCYT
Sbjct: 422 SRPAHYHVLLDENGFTADQLQMLTNNLCYT 333
>gb|BP640077.1|BP640077 BP640077 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-50-E21 3',
mRNA sequence
Length = 404
Score = 110 bits (234), Expect(2) = 2e-029
Identities = 43/57 (75%), Positives = 49/57 (85%)
Frame = +1 / -3
Query: 106 QTLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
Q+LTNNLCYTYARCTRSVS+VPPAYYAHLAAFRARFYMEPE S++ + S + GG
Sbjct: 402 QSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMASGSMARGG 232
Score = 40.9 bits (83), Expect(2) = 2e-029
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +1 / -3
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V PLPA+KE VKRVMFYC*
Sbjct: 186 VSPLPALKENVKRVMFYC* 130
>gb|BP601377.1|BP601377 BP601377 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-49-M05 3',
mRNA sequence
Length = 437
Score = 103 bits (219), Expect(2) = 1e-027
Identities = 40/53 (75%), Positives = 45/53 (84%)
Frame = +1 / -1
Query: 118 NNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
NNLCYTYARCTRSVS+VPPAYYAHLAAFRARFYMEPE S++ + S + GG
Sbjct: 437 NNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMASGSMARGG 279
Score = 41.8 bits (85), Expect(2) = 1e-027
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / -1
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KE VKRVMFYC*
Sbjct: 233 VRPLPALKENVKRVMFYC* 177
>gb|BP617474.1|BP617474 BP617474 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-24-B20 3',
mRNA sequence
Length = 439
Score = 102 bits (218), Expect(2) = 5e-027
Identities = 40/53 (75%), Positives = 45/53 (84%)
Frame = +1 / -2
Query: 118 NNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
NNLCYTYARCTRSVS+VPPAYYAHLAAFRARFYMEPE S++ + S + GG
Sbjct: 438 NNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMASGSMPRGG 280
Score = 40.5 bits (82), Expect(2) = 5e-027
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = +1 / -2
Query: 280 VKPLPAVKEKVKRVMFYC* 336
++PLPA+KE VKRVMFYC*
Sbjct: 234 LRPLPALKENVKRVMFYC* 178
>gb|BP575189.1|BP575189 BP575189 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-11-F08 3',
mRNA sequence
Length = 436
Score = 100 bits (213), Expect(2) = 9e-027
Identities = 39/52 (75%), Positives = 44/52 (84%)
Frame = +1 / -3
Query: 121 NLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
NLCYTYARCTRSVS+VPPAYYAHLAAFRARFYMEPE S++ + S + GG
Sbjct: 434 NLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMASGSMARGG 279
Score = 41.8 bits (85), Expect(2) = 9e-027
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / -3
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KE VKRVMFYC*
Sbjct: 233 VRPLPALKENVKRVMFYC* 177
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 121 bits (258), Expect = 3e-026
Identities = 44/79 (55%), Positives = 56/79 (70%)
Frame = +1 / +3
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
E+DFYLCSH G GTS+P HY+ LWDE FT+D++Q L +C+T+ RCT+ VS+VPP Y
Sbjct: 11193522 EYDFYLCSHHGGIGTSKPTHYYTLWDELGFTSDQVQKLIFEMCFTFTRCTKPVSLVPPVY 11193701
Query: 181 YAHLAAFRARFYMEPEMSE 237
YA + AFR R Y E E
Sbjct: 11193702 YADMVAFRGRMYHEASSRE 11193758
Score = 104 bits (222), Expect = 2e-021
Identities = 40/90 (44%), Positives = 59/90 (65%)
Frame = +1 / +2
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
E+DFYLCS G GTS+P HY+VL DE F ++++Q L +LC+T+ RCT+ V++VPP
Sbjct: 11200727 EYDFYLCSQHGAIGTSKPTHYYVLSDEIGFNSNQIQKLIFDLCFTFTRCTKPVALVPPVS 11200906
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTN 270
YA AA R R Y E + + + +S ++
Sbjct: 11200907 YADKAASRGRVYYEASLMKKNSKQSRGASS 11200996
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,357,789,339
Number of Sequences: 1013581
Number of extensions: 18732533
Number of successful extensions: 173942
Number of sequences better than 1.0e-020: 86
length of database: 302,980,290
effective HSP length: 55
effective length of database: 247,233,335
effective search space used: 38568400260
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)