TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2969912.2.1
(507 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AY070387.1| Arabidopsis thaliana At5g58490 mRNA sequence 104 2e-049
ref|NM_125235.2| Arabidopsis thaliana cinnamoyl-CoA reducta... 104 2e-049
gb|AY086975.1| Arabidopsis thaliana clone 30064 mRNA, compl... 104 2e-049
emb|BX832502.1|CNS09ZKK Arabidopsis thaliana Full-length cD... 104 2e-049
gb|BT002742.1| Arabidopsis thaliana clone C105311 putative ... 104 2e-049
emb|CQ804836.1| Sequence 1247 from Patent WO2004035798 104 2e-049
gb|BP796739.1|BP796739 BP796739 RAFL6 Arabidopsis thaliana ... 104 2e-049
emb|BX833752.1|CNS09Z4X Arabidopsis thaliana Full-length cD... 103 4e-048
emb|BX829945.1|CNS0A05K Arabidopsis thaliana Full-length cD... 85 4e-042
gb|BT006079.1| Arabidopsis thaliana clone U20366 putative c... 99 5e-040
ref|NM_126297.3| Arabidopsis thaliana cinnamoyl-CoA reducta... 99 7e-040
gb|BT005781.1| Arabidopsis thaliana clone RAFL15-02-P07 (R2... 99 7e-040
emb|BX819162.1|CNS0A82X Arabidopsis thaliana Full-length cD... 99 2e-039
emb|BX819049.1|CNS0A9QN Arabidopsis thaliana Full-length cD... 99 1e-035
gb|CK119010.1|CK119010 215a01.p1 AtM1 Arabidopsis thaliana ... 85 6e-035
dbj|AB025632.1| Arabidopsis thaliana genomic DNA, chromosom... 73 2e-034
gb|AC005312.3| Arabidopsis thaliana chromosome 2 clone T16F... 73 5e-032
gb|AY093143.1| Arabidopsis thaliana putative cinnamoyl-CoA ... 73 3e-030
ref|NM_128920.2| Arabidopsis thaliana cinnamoyl-CoA reducta... 73 3e-030
emb|AX412482.1| Sequence 246 from Patent WO0222675 73 3e-030
gb|BT008718.1| Arabidopsis thaliana At2g33600 gene, complet... 73 3e-030
gb|CK117630.1|CK117630 215b04.p1 AtM1 Arabidopsis thaliana ... 73 3e-030
gb|DQ056491.1| Arabidopsis thaliana putative cinnamyl-alcoh... 57 4e-030
ref|NM_104019.2| Arabidopsis thaliana alcohol dehydrogenase... 57 4e-030
gb|AV540919.1|AV540919 AV540919 Arabidopsis thaliana roots ... 57 4e-029
ref|NM_121949.2| Arabidopsis thaliana alcohol dehydrogenase... 57 4e-029
gb|AY088448.1| Arabidopsis thaliana clone 6748 mRNA, comple... 57 4e-029
emb|BX833200.1|CNS09YNN Arabidopsis thaliana Full-length cD... 57 4e-029
gb|AV822159.1|AV822159 AV822159 RAFL5 Arabidopsis thaliana ... 57 4e-029
gb|BP560824.1|BP560824 BP560824 RAFL5 Arabidopsis thaliana ... 57 4e-029
gb|CB252385.1|CB252385 27-E013702-019-004-B01Q-T7R MPIZ-ADI... 57 4e-029
gb|AV532425.1|AV532425 AV532425 Arabidopsis thaliana flower... 57 4e-029
gb|CB253432.1|CB253432 01-E012999-019-004-B01-T7R MPIZ-ADIS... 57 4e-029
gb|BU635054.1|BU635054 015C09 Infected Arabidopsis Leaf Ara... 60 3e-026
gb|CD529311.1|CD529311 02H15 Arabidopsis Leaf Senescence Li... 73 2e-025
gb|AV828474.1|AV828474 AV828474 RAFL9 Arabidopsis thaliana ... 60 2e-025
gb|AV552812.1|AV552812 AV552812 Arabidopsis thaliana roots ... 51 9e-025
ref|NM_105351.2| Arabidopsis thaliana alcohol dehydrogenase... 51 1e-024
ref|NM_119708.2| Arabidopsis thaliana unknown protein AT4G3... 51 3e-024
gb|BT022119.1| Arabidopsis thaliana At4g35420 mRNA, complet... 51 3e-024
gb|BU635464.1|BU635464 023D12 Infected Arabidopsis Leaf Ara... 73 3e-024
ref|NM_101463.2| Arabidopsis thaliana CCR1 (CINNAMOYL COA R... 73 5e-024
gb|AY087316.1| Arabidopsis thaliana clone 34141 mRNA, compl... 73 5e-024
emb|BX815742.1|CNS0ABF5 Arabidopsis thaliana Full-length cD... 73 5e-024
emb|BX815700.1|CNS0ABD9 Arabidopsis thaliana Full-length cD... 73 5e-024
emb|BX815831.1|CNS0AAHT Arabidopsis thaliana Full-length cD... 73 5e-024
emb|BX815406.1|CNS0ABFH Arabidopsis thaliana Full-length cD... 73 5e-024
emb|BX815739.1|CNS0ABDT Arabidopsis thaliana Full-length cD... 73 5e-024
emb|BX816709.1|CNS0ABPI Arabidopsis thaliana Full-length cD... 73 5e-024
gb|AF320624.1|AF320624 Arabidopsis thaliana cinnamoyl CoA r... 73 5e-024
gb|AF321114.1|AF321114 Arabidopsis thaliana cinnamoyl-CoA r... 73 5e-024
gb|AF332459.1| Arabidopsis thaliana clone C00167 (e) putati... 73 5e-024
gb|AY743921.1| Arabidopsis thaliana cinnamoyl CoA reductase... 73 5e-024
gb|BU634974.1|BU634974 013F08 Infected Arabidopsis Leaf Ara... 73 5e-024
gb|BP560996.1|BP560996 BP560996 RAFL5 Arabidopsis thaliana ... 73 5e-024
ref|NM_106730.2| Arabidopsis thaliana CCR2 (CINNAMOYL COA R... 73 2e-023
gb|AY087148.1| Arabidopsis thaliana clone 32255 mRNA, compl... 73 2e-023
gb|AF320623.1|AF320623 Arabidopsis thaliana cinnamoyl CoA r... 73 2e-023
gb|BT005826.1| Arabidopsis thaliana At1g80820 gene, complet... 73 2e-023
emb|CQ805268.1| Sequence 1679 from Patent WO2004035798 73 2e-023
gb|AV823328.1|AV823328 AV823328 RAFL5 Arabidopsis thaliana ... 71 7e-023
emb|BX813775.1|CNS0AC0E Arabidopsis thaliana Full-length cD... 68 1e-022
gb|CB252321.1|CB252321 28-E015391-019-006-G07-T7R MPIZ-ADIS... 70 1e-022
gb|AV519636.1|AV519636 AV519636 Arabidopsis thaliana aboveg... 73 1e-022
ref|NM_100821.2| Arabidopsis thaliana alcohol dehydrogenase... 71 5e-022
gb|AF462838.1|AF462838 Arabidopsis thaliana At1g09500/F14J9... 71 5e-022
gb|AF424567.1|AF424567 Arabidopsis thaliana At1g09500/F14J9... 71 5e-022
emb|BX818550.1|CNS0AAW1 Arabidopsis thaliana Full-length cD... 72 5e-022
ref|NM_001035935.1| Arabidopsis thaliana cinnamyl-alcohol d... 71 5e-022
gb|BT000479.1| Arabidopsis thaliana putative cinnamyl alcoh... 71 5e-022
emb|AX506833.1| Sequence 1528 from Patent WO0216655 71 5e-022
emb|AX651786.1| Sequence 639 from Patent WO03000898 71 5e-022
gb|AU235328.1|AU235328 AU235328 RAFL14 Arabidopsis thaliana... 51 9e-022
emb|BX827054.1|CNS0A42W Arabidopsis thaliana Full-length cD... 50 2e-021
gb|AV550353.1|AV550353 AV550353 Arabidopsis thaliana roots ... 57 4e-021
>gb|AY070387.1| Arabidopsis thaliana At5g58490 mRNA sequence
Length = 1176
Score = 104 bits (221), Expect(3) = 2e-049
Identities = 37/55 (67%), Positives = 45/55 (81%)
Frame = +3 / +3
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
V+RVVVTSSISA+ P+P WPA ++ +E CW DYC +NG+WYP SKTLAEKAAW
Sbjct: 402 VKRVVVTSSISAITPSPNWPADKIKNEECWAAEDYCRQNGLWYPLSKTLAEKAAW 566
Score = 84.9 bits (179), Expect(3) = 2e-049
Identities = 37/72 (51%), Positives = 44/72 (61%)
Frame = +3 / +3
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
RL F GCSGVFHLASPC VD V+DPQ QL+ PAV+GT+NV+ A K
Sbjct: 213 RLHLFEMDLLQYDTVSAAINGCSGVFHLASPCIVDEVQDPQKQLLDPAVKGTINVLTAAK 392
Query: 330 DAGGVRRVVVTS 365
+A R VV +S
Sbjct: 393 EASVKRVVVTSS 428
Score = 46.9 bits (96), Expect(3) = 2e-049
Identities = 23/38 (60%), Positives = 25/38 (65%)
Frame = +3 / +3
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASG IGS LV LL RGY+V A V + D ET H
Sbjct: 72 VTGASGCIGSWLVHQLLLRGYSVHATVKNLQDEKETKH 185
>ref|NM_125235.2| Arabidopsis thaliana cinnamoyl-CoA reductase AT5G58490 mRNA,
complete cds
Length = 1164
Score = 104 bits (221), Expect(3) = 2e-049
Identities = 37/55 (67%), Positives = 45/55 (81%)
Frame = +3 / +2
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
V+RVVVTSSISA+ P+P WPA ++ +E CW DYC +NG+WYP SKTLAEKAAW
Sbjct: 407 VKRVVVTSSISAITPSPNWPADKIKNEECWAAEDYCRQNGLWYPLSKTLAEKAAW 571
Score = 84.9 bits (179), Expect(3) = 2e-049
Identities = 37/72 (51%), Positives = 44/72 (61%)
Frame = +3 / +2
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
RL F GCSGVFHLASPC VD V+DPQ QL+ PAV+GT+NV+ A K
Sbjct: 218 RLHLFEMDLLQYDTVSAAINGCSGVFHLASPCIVDEVQDPQKQLLDPAVKGTINVLTAAK 397
Query: 330 DAGGVRRVVVTS 365
+A R VV +S
Sbjct: 398 EASVKRVVVTSS 433
Score = 46.9 bits (96), Expect(3) = 2e-049
Identities = 23/38 (60%), Positives = 25/38 (65%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASG IGS LV LL RGY+V A V + D ET H
Sbjct: 77 VTGASGCIGSWLVHQLLLRGYSVHATVKNLQDEKETKH 190
>gb|AY086975.1| Arabidopsis thaliana clone 30064 mRNA, complete sequence
Length = 1150
Score = 104 bits (221), Expect(3) = 2e-049
Identities = 37/55 (67%), Positives = 45/55 (81%)
Frame = +3 / +2
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
V+RVVVTSSISA+ P+P WPA ++ +E CW DYC +NG+WYP SKTLAEKAAW
Sbjct: 407 VKRVVVTSSISAITPSPNWPADKIKNEECWAAEDYCRQNGLWYPLSKTLAEKAAW 571
Score = 84.9 bits (179), Expect(3) = 2e-049
Identities = 37/72 (51%), Positives = 44/72 (61%)
Frame = +3 / +2
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
RL F GCSGVFHLASPC VD V+DPQ QL+ PAV+GT+NV+ A K
Sbjct: 218 RLHLFEMDLLQYDTVSAAINGCSGVFHLASPCIVDEVQDPQKQLLDPAVKGTINVLTAAK 397
Query: 330 DAGGVRRVVVTS 365
+A R VV +S
Sbjct: 398 EASVKRVVVTSS 433
Score = 46.9 bits (96), Expect(3) = 2e-049
Identities = 23/38 (60%), Positives = 25/38 (65%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASG IGS LV LL RGY+V A V + D ET H
Sbjct: 77 VTGASGCIGSWLVHQLLLRGYSVHATVKNLQDEKETKH 190
>emb|BX832502.1|CNS09ZKK Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH77ZF02 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1082
Score = 104 bits (221), Expect(3) = 2e-049
Identities = 37/55 (67%), Positives = 45/55 (81%)
Frame = +3 / +3
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
V+RVVVTSSISA+ P+P WPA ++ +E CW DYC +NG+WYP SKTLAEKAAW
Sbjct: 378 VKRVVVTSSISAITPSPNWPADKIKNEECWAAEDYCRQNGLWYPLSKTLAEKAAW 542
Score = 84.9 bits (179), Expect(3) = 2e-049
Identities = 37/72 (51%), Positives = 44/72 (61%)
Frame = +3 / +3
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
RL F GCSGVFHLASPC VD V+DPQ QL+ PAV+GT+NV+ A K
Sbjct: 189 RLHLFEMDLLQYDTVSAAINGCSGVFHLASPCIVDEVQDPQKQLLDPAVKGTINVLTAAK 368
Query: 330 DAGGVRRVVVTS 365
+A R VV +S
Sbjct: 369 EASVKRVVVTSS 404
Score = 46.9 bits (96), Expect(3) = 2e-049
Identities = 23/38 (60%), Positives = 25/38 (65%)
Frame = +3 / +3
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASG IGS LV LL RGY+V A V + D ET H
Sbjct: 48 VTGASGCIGSWLVHQLLLRGYSVHATVKNLQDEKETKH 161
>gb|BT002742.1| Arabidopsis thaliana clone C105311 putative cinnamoyl-CoA reductase
(At5g58490) mRNA, complete cds
Length = 1006
Score = 104 bits (221), Expect(3) = 2e-049
Identities = 37/55 (67%), Positives = 45/55 (81%)
Frame = +3 / +1
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
V+RVVVTSSISA+ P+P WPA ++ +E CW DYC +NG+WYP SKTLAEKAAW
Sbjct: 361 VKRVVVTSSISAITPSPNWPADKIKNEECWAAEDYCRQNGLWYPLSKTLAEKAAW 525
Score = 84.9 bits (179), Expect(3) = 2e-049
Identities = 37/72 (51%), Positives = 44/72 (61%)
Frame = +3 / +1
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
RL F GCSGVFHLASPC VD V+DPQ QL+ PAV+GT+NV+ A K
Sbjct: 172 RLHLFEMDLLQYDTVSAAINGCSGVFHLASPCIVDEVQDPQKQLLDPAVKGTINVLTAAK 351
Query: 330 DAGGVRRVVVTS 365
+A R VV +S
Sbjct: 352 EASVKRVVVTSS 387
Score = 46.9 bits (96), Expect(3) = 2e-049
Identities = 23/38 (60%), Positives = 25/38 (65%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASG IGS LV LL RGY+V A V + D ET H
Sbjct: 31 VTGASGCIGSWLVHQLLLRGYSVHATVKNLQDEKETKH 144
>emb|CQ804836.1| Sequence 1247 from Patent WO2004035798
Length = 975
Score = 104 bits (221), Expect(3) = 2e-049
Identities = 37/55 (67%), Positives = 45/55 (81%)
Frame = +3 / +1
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
V+RVVVTSSISA+ P+P WPA ++ +E CW DYC +NG+WYP SKTLAEKAAW
Sbjct: 361 VKRVVVTSSISAITPSPNWPADKIKNEECWAAEDYCRQNGLWYPLSKTLAEKAAW 525
Score = 84.9 bits (179), Expect(3) = 2e-049
Identities = 37/72 (51%), Positives = 44/72 (61%)
Frame = +3 / +1
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
RL F GCSGVFHLASPC VD V+DPQ QL+ PAV+GT+NV+ A K
Sbjct: 172 RLHLFEMDLLQYDTVSAAINGCSGVFHLASPCIVDEVQDPQKQLLDPAVKGTINVLTAAK 351
Query: 330 DAGGVRRVVVTS 365
+A R VV +S
Sbjct: 352 EASVKRVVVTSS 387
Score = 46.9 bits (96), Expect(3) = 2e-049
Identities = 23/38 (60%), Positives = 25/38 (65%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASG IGS LV LL RGY+V A V + D ET H
Sbjct: 31 VTGASGCIGSWLVHQLLLRGYSVHATVKNLQDEKETKH 144
>gb|BP796739.1|BP796739 BP796739 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-07-O12 5',
mRNA sequence
Length = 669
Score = 104 bits (221), Expect(3) = 2e-049
Identities = 37/55 (67%), Positives = 45/55 (81%)
Frame = +3 / +1
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
V+RVVVTSSISA+ P+P WPA ++ +E CW DYC +NG+WYP SKTLAEKAAW
Sbjct: 412 VKRVVVTSSISAITPSPNWPADKIKNEECWAAEDYCRQNGLWYPLSKTLAEKAAW 576
Score = 84.9 bits (179), Expect(3) = 2e-049
Identities = 37/72 (51%), Positives = 44/72 (61%)
Frame = +3 / +1
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
RL F GCSGVFHLASPC VD V+DPQ QL+ PAV+GT+NV+ A K
Sbjct: 223 RLHLFEMDLLQYDTVSAAINGCSGVFHLASPCIVDEVQDPQKQLLDPAVKGTINVLTAAK 402
Query: 330 DAGGVRRVVVTS 365
+A R VV +S
Sbjct: 403 EASVKRVVVTSS 438
Score = 46.9 bits (96), Expect(3) = 2e-049
Identities = 23/38 (60%), Positives = 25/38 (65%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASG IGS LV LL RGY+V A V + D ET H
Sbjct: 82 VTGASGCIGSWLVHQLLLRGYSVHATVKNLQDEKETKH 195
>emb|BX833752.1|CNS09Z4X Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL75ZC10 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 1042
Score = 103 bits (219), Expect(3) = 4e-048
Identities = 36/55 (65%), Positives = 45/55 (81%)
Frame = +3 / +2
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
++RVVVTSSISA+ P+P WPA ++ +E CW DYC +NG+WYP SKTLAEKAAW
Sbjct: 353 IKRVVVTSSISAITPSPDWPADKIKNEECWAAEDYCRQNGLWYPLSKTLAEKAAW 517
Score = 84.5 bits (178), Expect(3) = 4e-048
Identities = 37/72 (51%), Positives = 44/72 (61%)
Frame = +3 / +2
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
RL F GCSGVFHLASPC VD V+DPQ QL+ PAV+GT+NV+ A K
Sbjct: 164 RLHLFEMDLLQYDTVSAAINGCSGVFHLASPCIVDEVQDPQKQLLDPAVKGTINVLTAAK 343
Query: 330 DAGGVRRVVVTS 365
+A R VV +S
Sbjct: 344 EASIKRVVVTSS 379
Score = 44.1 bits (90), Expect(3) = 4e-048
Identities = 22/38 (57%), Positives = 24/38 (63%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGAS IGS LV LL RGY+V A V + D ET H
Sbjct: 23 VTGASSCIGSWLVHQLLLRGYSVHATVKNLQDEKETKH 136
>emb|BX829945.1|CNS0A05K Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB48ZH08 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1291
Score = 84.9 bits (179), Expect(4) = 4e-042
Identities = 37/72 (51%), Positives = 44/72 (61%)
Frame = +3 / +3
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
RL F GCSGVFHLASPC VD V+DPQ QL+ PAV+GT+NV+ A K
Sbjct: 267 RLHLFEMDLLQYDTVSAAINGCSGVFHLASPCIVDEVQDPQKQLLDPAVKGTINVLTAAK 446
Query: 330 DAGGVRRVVVTS 365
+A R VV +S
Sbjct: 447 EASFKRVVVTSS 482
Score = 71.6 bits (150), Expect(4) = 4e-042
Identities = 25/42 (59%), Positives = 32/42 (76%)
Frame = +3 / +3
Query: 345 RRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWY 470
+RVVVTSSISA+ P+P WPA ++ +E CW DYC +NGV Y
Sbjct: 459 KRVVVTSSISAITPSPNWPADKIKNEECWAAEDYCRQNGVCY 584
Score = 38.6 bits (78), Expect(4) = 4e-042
Identities = 19/27 (70%), Positives = 20/27 (74%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGV 83
VTGASG IGS LV LL RGY+V A V
Sbjct: 44 VTGASGCIGSWLVHQLLLRGYSVHATV 124
Score = 37.7 bits (76), Expect(4) = 4e-042
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +3 / +1
Query: 462 VWYPASKTLAEKAAW 506
+WYP SKTLAEKAAW
Sbjct: 658 LWYPLSKTLAEKAAW 702
>gb|BT006079.1| Arabidopsis thaliana clone U20366 putative cinnamoyl-CoA reductase
(At2g02400) mRNA, complete cds
Length = 988
Score = 98.7 bits (209), Expect(3) = 5e-040
Identities = 37/55 (67%), Positives = 43/55 (78%)
Frame = +3 / +1
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
VRRVV+TSSISA+VPNP WP VDE W+D+D+C+ WYP SKTLAEKAAW
Sbjct: 346 VRRVVITSSISALVPNPNWPEKVPVDESSWSDLDFCKSRQKWYPISKTLAEKAAW 510
Score = 73.0 bits (153), Expect(3) = 5e-040
Identities = 28/52 (53%), Positives = 39/52 (75%)
Frame = +3 / +1
Query: 210 GCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTS 365
GC+GVFH+ASPCT+DP DP+ +L+ PAV+GT+NV+ A K R V+ +S
Sbjct: 217 GCAGVFHVASPCTLDPPVDPEKELVEPAVKGTINVLEAAKRFNVRRVVITSS 372
Score = 35.4 bits (71), Expect(3) = 5e-040
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGY 65
VTGA+GFIGS ++R L+ +GY
Sbjct: 22 VTGANGFIGSWIIRTLIEKGY 84
>ref|NM_126297.3| Arabidopsis thaliana cinnamoyl-CoA reductase AT2G02400 mRNA,
complete cds
Length = 1229
Score = 98.7 bits (209), Expect(3) = 7e-040
Identities = 37/55 (67%), Positives = 43/55 (78%)
Frame = +3 / +1
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
VRRVV+TSSISA+VPNP WP VDE W+D+D+C+ WYP SKTLAEKAAW
Sbjct: 472 VRRVVITSSISALVPNPNWPEKVPVDESSWSDLDFCKSRQKWYPISKTLAEKAAW 636
Score = 73.0 bits (153), Expect(3) = 7e-040
Identities = 28/52 (53%), Positives = 39/52 (75%)
Frame = +3 / +1
Query: 210 GCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTS 365
GC+GVFH+ASPCT+DP DP+ +L+ PAV+GT+NV+ A K R V+ +S
Sbjct: 343 GCAGVFHVASPCTLDPPVDPEKELVEPAVKGTINVLEAAKRFNVRRVVITSS 498
Score = 35.4 bits (71), Expect(3) = 7e-040
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGY 65
VTGA+GFIGS ++R L+ +GY
Sbjct: 148 VTGANGFIGSWIIRTLIEKGY 210
>gb|BT005781.1| Arabidopsis thaliana clone RAFL15-02-P07 (R20366) putative
cinnamoyl-CoA reductase (At2g02400) mRNA, complete cds
Length = 1235
Score = 98.7 bits (209), Expect(3) = 7e-040
Identities = 37/55 (67%), Positives = 43/55 (78%)
Frame = +3 / +2
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
VRRVV+TSSISA+VPNP WP VDE W+D+D+C+ WYP SKTLAEKAAW
Sbjct: 473 VRRVVITSSISALVPNPNWPEKVPVDESSWSDLDFCKSRQKWYPISKTLAEKAAW 637
Score = 73.0 bits (153), Expect(3) = 7e-040
Identities = 28/52 (53%), Positives = 39/52 (75%)
Frame = +3 / +2
Query: 210 GCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTS 365
GC+GVFH+ASPCT+DP DP+ +L+ PAV+GT+NV+ A K R V+ +S
Sbjct: 344 GCAGVFHVASPCTLDPPVDPEKELVEPAVKGTINVLEAAKRFNVRRVVITSS 499
Score = 35.4 bits (71), Expect(3) = 7e-040
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGY 65
VTGA+GFIGS ++R L+ +GY
Sbjct: 149 VTGANGFIGSWIIRTLIEKGY 211
>emb|BX819162.1|CNS0A82X Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB53ZA01 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1136
Score = 98.7 bits (209), Expect(3) = 2e-039
Identities = 37/55 (67%), Positives = 43/55 (78%)
Frame = +3 / +3
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
VRRVV+TSSISA+VPNP WP VDE W+D+D+C+ WYP SKTLAEKAAW
Sbjct: 348 VRRVVITSSISALVPNPNWPEKVPVDESSWSDLDFCKSRQKWYPISKTLAEKAAW 512
Score = 73.0 bits (153), Expect(3) = 2e-039
Identities = 28/52 (53%), Positives = 39/52 (75%)
Frame = +3 / +3
Query: 210 GCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTS 365
GC+GVFH+ASPCT+DP DP+ +L+ PAV+GT+NV+ A K R V+ +S
Sbjct: 219 GCAGVFHVASPCTLDPPVDPEKELVEPAVKGTINVLEAAKRFNVRRVVITSS 374
Score = 33.6 bits (67), Expect(3) = 2e-039
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +3 / +3
Query: 6 TGASGFIGSTLVRGLLGRGY 65
TGA+GFIGS ++R L+ +GY
Sbjct: 27 TGANGFIGSWIIRTLIEKGY 86
>emb|BX819049.1|CNS0A9QN Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB3ZF05 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 930
Score = 98.7 bits (209), Expect(2) = 1e-035
Identities = 37/55 (67%), Positives = 43/55 (78%)
Frame = +3 / +1
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
VRRVV+TSSISA+VPNP WP VDE W+D+D+C+ WYP SKTLAEKAAW
Sbjct: 172 VRRVVITSSISALVPNPNWPEKVPVDESSWSDLDFCKSRQKWYPISKTLAEKAAW 336
Score = 73.0 bits (153), Expect(2) = 1e-035
Identities = 28/52 (53%), Positives = 39/52 (75%)
Frame = +3 / +1
Query: 210 GCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTS 365
GC+GVFH+ASPCT+DP DP+ +L+ PAV+GT+NV+ A K R V+ +S
Sbjct: 43 GCAGVFHVASPCTLDPPVDPEKELVEPAVKGTINVLEAAKRFNVRRVVITSS 198
>gb|CK119010.1|CK119010 215a01.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011A01215
5-PRIME, mRNA sequence
Length = 475
Score = 84.9 bits (179), Expect(3) = 6e-035
Identities = 37/72 (51%), Positives = 44/72 (61%)
Frame = +3 / +3
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
RL F GCSGVFHLASPC VD V+DPQ QL+ PAV+GT+NV+ A K
Sbjct: 189 RLHLFEMDLLQYDTVSAAINGCSGVFHLASPCIVDEVQDPQKQLLDPAVKGTINVLTAAK 368
Query: 330 DAGGVRRVVVTS 365
+A R VV +S
Sbjct: 369 EASVKRVVVTSS 404
Score = 55.6 bits (115), Expect(3) = 6e-035
Identities = 19/30 (63%), Positives = 25/30 (83%)
Frame = +3 / +3
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCW 431
V+RVVVTSSISA+ P+P WPA ++ +E CW
Sbjct: 378 VKRVVVTSSISAITPSPNWPADKIKNEECW 467
Score = 46.9 bits (96), Expect(3) = 6e-035
Identities = 23/38 (60%), Positives = 25/38 (65%)
Frame = +3 / +3
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASG IGS LV LL RGY+V A V + D ET H
Sbjct: 48 VTGASGCIGSWLVHQLLLRGYSVHATVKNLQDEKETKH 161
>dbj|AB025632.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQJ2
Length = 51440
Score = 73.5 bits (154), Expect(4) = 2e-034
Identities = 26/43 (60%), Positives = 33/43 (76%)
Frame = +3 / +1
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWY 470
V+RVVVTSSISA+ P+P WPA ++ +E CW DYC +NGV Y
Sbjct: 29629 VKRVVVTSSISAITPSPNWPADKIKNEECWAAEDYCRQNGVCY 29757
Score = 53.3 bits (110), Expect(4) = 2e-034
Identities = 22/47 (46%), Positives = 24/47 (51%)
Frame = +3 / +1
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVP 290
RL F GCSGVFHLASPC VD V+DPQ + P
Sbjct: 29359 RLHLFEMDLLQYDTVSAAINGCSGVFHLASPCIVDEVQDPQVLISTP 29499
Score = 38.2 bits (77), Expect(4) = 2e-034
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = +3 / +1
Query: 270 QNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTS 365
Q QL+ PAV+GT+NV+ A K+A R VV +S
Sbjct: 29560 QKQLLDPAVKGTINVLTAAKEASVKRVVVTSS 29655
Score = 37.7 bits (76), Expect(4) = 2e-034
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +3 / +2
Query: 462 VWYPASKTLAEKAAW 506
+WYP SKTLAEKAAW
Sbjct: 29831 LWYPLSKTLAEKAAW 29875
>gb|AC005312.3| Arabidopsis thaliana chromosome 2 clone T16F16 map CIC11A04, complete
sequence
Length = 74903
Score = 73.0 bits (153), Expect(3) = 5e-032
Identities = 28/52 (53%), Positives = 39/52 (75%)
Frame = +3 / -1
Query: 210 GCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTS 365
GC+GVFH+ASPCT+DP DP+ +L+ PAV+GT+NV+ A K R V+ +S
Sbjct: 47840 GCAGVFHVASPCTLDPPVDPEKELVEPAVKGTINVLEAAKRFNVRRVVITSS 47685
Score = 67.0 bits (140), Expect(3) = 5e-032
Identities = 25/41 (60%), Positives = 31/41 (75%)
Frame = +3 / -1
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGV 464
VRRVV+TSSISA+VPNP WP VDE W+D+D+C+ V
Sbjct: 47711 VRRVVITSSISALVPNPNWPEKVPVDESSWSDLDFCKSRQV 47589
Score = 37.3 bits (75), Expect(3) = 5e-032
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +3 / -3
Query: 465 WYPASKTLAEKAAW 506
WYP SKTLAEKAAW
Sbjct: 47508 WYPISKTLAEKAAW 47467
>gb|AY093143.1| Arabidopsis thaliana putative cinnamoyl-CoA reductase (At2g33600)
mRNA, complete cds
Length = 1286
Score = 73.5 bits (154), Expect(3) = 3e-030
Identities = 29/55 (52%), Positives = 36/55 (65%)
Frame = +3 / +3
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
V+RVV SS+SAV NP W +V+DE W+D DYC+K WY SKT AE A+
Sbjct: 465 VKRVVYVSSVSAVAMNPMWSKSQVLDETAWSDQDYCKKTENWYSLSKTRAESEAF 629
Score = 59.7 bits (124), Expect(3) = 3e-030
Identities = 28/72 (38%), Positives = 39/72 (54%)
Frame = +3 / +3
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
+L F+ GCSGVFH+A P V +P+ L+ PAV+GTLNV++A
Sbjct: 276 KLKLFKADLLNYGSLQSAIAGCSGVFHVACPVPSASVPNPEVDLIAPAVDGTLNVLKACV 455
Query: 330 DAGGVRRVVVTS 365
+A R V V+S
Sbjct: 456 EAKVKRVVYVSS 491
Score = 38.2 bits (77), Expect(3) = 3e-030
Identities = 17/30 (56%), Positives = 19/30 (63%)
Frame = +3 / +3
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDP 92
VTGA GF+GS +V LL R Y V V DP
Sbjct: 138 VTGAGGFLGSWVVNHLLSRDYFVHGTVRDP 227
>ref|NM_128920.2| Arabidopsis thaliana cinnamoyl-CoA reductase AT2G33600 mRNA,
complete cds
Length = 1286
Score = 73.5 bits (154), Expect(3) = 3e-030
Identities = 29/55 (52%), Positives = 36/55 (65%)
Frame = +3 / +3
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
V+RVV SS+SAV NP W +V+DE W+D DYC+K WY SKT AE A+
Sbjct: 465 VKRVVYVSSVSAVAMNPMWSKSQVLDETAWSDQDYCKKTENWYSLSKTRAESEAF 629
Score = 59.7 bits (124), Expect(3) = 3e-030
Identities = 28/72 (38%), Positives = 39/72 (54%)
Frame = +3 / +3
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
+L F+ GCSGVFH+A P V +P+ L+ PAV+GTLNV++A
Sbjct: 276 KLKLFKADLLNYGSLQSAIAGCSGVFHVACPVPSASVPNPEVDLIAPAVDGTLNVLKACV 455
Query: 330 DAGGVRRVVVTS 365
+A R V V+S
Sbjct: 456 EAKVKRVVYVSS 491
Score = 38.2 bits (77), Expect(3) = 3e-030
Identities = 17/30 (56%), Positives = 19/30 (63%)
Frame = +3 / +3
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDP 92
VTGA GF+GS +V LL R Y V V DP
Sbjct: 138 VTGAGGFLGSWVVNHLLSRDYFVHGTVRDP 227
>emb|AX412482.1| Sequence 246 from Patent WO0222675
Length = 966
Score = 73.5 bits (154), Expect(3) = 3e-030
Identities = 29/55 (52%), Positives = 36/55 (65%)
Frame = +3 / +1
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
V+RVV SS+SAV NP W +V+DE W+D DYC+K WY SKT AE A+
Sbjct: 358 VKRVVYVSSVSAVAMNPMWSKSQVLDETAWSDQDYCKKTENWYSLSKTRAESEAF 522
Score = 59.7 bits (124), Expect(3) = 3e-030
Identities = 28/72 (38%), Positives = 39/72 (54%)
Frame = +3 / +1
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
+L F+ GCSGVFH+A P V +P+ L+ PAV+GTLNV++A
Sbjct: 169 KLKLFKADLLNYGSLQSAIAGCSGVFHVACPVPSASVPNPEVDLIAPAVDGTLNVLKACV 348
Query: 330 DAGGVRRVVVTS 365
+A R V V+S
Sbjct: 349 EAKVKRVVYVSS 384
Score = 38.2 bits (77), Expect(3) = 3e-030
Identities = 17/30 (56%), Positives = 19/30 (63%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDP 92
VTGA GF+GS +V LL R Y V V DP
Sbjct: 31 VTGAGGFLGSWVVNHLLSRDYFVHGTVRDP 120
>gb|BT008718.1| Arabidopsis thaliana At2g33600 gene, complete cds
Length = 966
Score = 73.5 bits (154), Expect(3) = 3e-030
Identities = 29/55 (52%), Positives = 36/55 (65%)
Frame = +3 / +1
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
V+RVV SS+SAV NP W +V+DE W+D DYC+K WY SKT AE A+
Sbjct: 358 VKRVVYVSSVSAVAMNPMWSKSQVLDETAWSDQDYCKKTENWYSLSKTRAESEAF 522
Score = 59.7 bits (124), Expect(3) = 3e-030
Identities = 28/72 (38%), Positives = 39/72 (54%)
Frame = +3 / +1
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
+L F+ GCSGVFH+A P V +P+ L+ PAV+GTLNV++A
Sbjct: 169 KLKLFKADLLNYGSLQSAIAGCSGVFHVACPVPSASVPNPEVDLIAPAVDGTLNVLKACV 348
Query: 330 DAGGVRRVVVTS 365
+A R V V+S
Sbjct: 349 EAKVKRVVYVSS 384
Score = 38.2 bits (77), Expect(3) = 3e-030
Identities = 17/30 (56%), Positives = 19/30 (63%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDP 92
VTGA GF+GS +V LL R Y V V DP
Sbjct: 31 VTGAGGFLGSWVVNHLLSRDYFVHGTVRDP 120
>gb|CK117630.1|CK117630 215b04.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011B04215
5-PRIME, mRNA sequence
Length = 647
Score = 73.5 bits (154), Expect(3) = 3e-030
Identities = 29/55 (52%), Positives = 36/55 (65%)
Frame = +3 / +1
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
V+RVV SS+SAV NP W +V+DE W+D DYC+K WY SKT AE A+
Sbjct: 433 VKRVVYVSSVSAVAMNPMWSKSQVLDETAWSDQDYCKKTENWYSLSKTRAESEAF 597
Score = 59.7 bits (124), Expect(3) = 3e-030
Identities = 28/72 (38%), Positives = 39/72 (54%)
Frame = +3 / +1
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
+L F+ GCSGVFH+A P V +P+ L+ PAV+GTLNV++A
Sbjct: 244 KLKLFKADLLNYGSLQSAIAGCSGVFHVACPVPSASVPNPEVDLIAPAVDGTLNVLKACV 423
Query: 330 DAGGVRRVVVTS 365
+A R V V+S
Sbjct: 424 EAKVKRVVYVSS 459
Score = 38.2 bits (77), Expect(3) = 3e-030
Identities = 17/30 (56%), Positives = 19/30 (63%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDP 92
VTGA GF+GS +V LL R Y V V DP
Sbjct: 106 VTGAGGFLGSWVVNHLLSRDYFVHGTVRDP 195
>gb|DQ056491.1| Arabidopsis thaliana putative cinnamyl-alcohol dehydrogenase
(At1g51410) mRNA, complete cds
Length = 978
Score = 56.5 bits (117), Expect(4) = 4e-030
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +3 / +1
Query: 258 VKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCW 431
VKDPQ +L+ PAV+GT+NV+ + V+RVV+TSSI+AV N E + + W
Sbjct: 277 VKDPQAELLDPAVKGTINVLSSCLKTSSVKRVVLTSSIAAVAFNGMPRTPETIVDETW 450
Score = 52.8 bits (109), Expect(4) = 4e-030
Identities = 22/38 (57%), Positives = 29/38 (76%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASG+I S +V+ LL RGY V+A V DP+D +T+H
Sbjct: 31 VTGASGYIASWIVKLLLLRGYTVKASVRDPNDPRKTEH 144
Score = 49.2 bits (101), Expect(4) = 4e-030
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = +3 / +1
Query: 411 VVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
+VDE + D DYC + +WY SKTLAE AAW
Sbjct: 433 IVDETWFADPDYCRASKLWYVLSKTLAENAAW 528
Score = 29.9 bits (59), Expect(4) = 4e-030
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +3 / +1
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASP 242
RL F+ GC GVFH ASP
Sbjct: 172 RLKLFKANLLEEGSFDSAIDGCEGVFHTASP 264
>ref|NM_104019.2| Arabidopsis thaliana alcohol dehydrogenase AT1G51410 mRNA, complete
cds
Length = 978
Score = 56.5 bits (117), Expect(4) = 4e-030
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +3 / +1
Query: 258 VKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCW 431
VKDPQ +L+ PAV+GT+NV+ + V+RVV+TSSI+AV N E + + W
Sbjct: 277 VKDPQAELLDPAVKGTINVLSSCLKTSSVKRVVLTSSIAAVAFNGMPRTPETIVDETW 450
Score = 52.8 bits (109), Expect(4) = 4e-030
Identities = 22/38 (57%), Positives = 29/38 (76%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASG+I S +V+ LL RGY V+A V DP+D +T+H
Sbjct: 31 VTGASGYIASWIVKLLLLRGYTVKASVRDPNDPRKTEH 144
Score = 49.2 bits (101), Expect(4) = 4e-030
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = +3 / +1
Query: 411 VVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
+VDE + D DYC + +WY SKTLAE AAW
Sbjct: 433 IVDETWFADPDYCRASKLWYVLSKTLAENAAW 528
Score = 29.9 bits (59), Expect(4) = 4e-030
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +3 / +1
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASP 242
RL F+ GC GVFH ASP
Sbjct: 172 RLKLFKANLLEEGSFDSAIDGCEGVFHTASP 264
>gb|AV540919.1|AV540919 AV540919 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ157c06F 3', mRNA sequence
Length = 593
Score = 56.5 bits (117), Expect(4) = 4e-029
Identities = 27/57 (47%), Positives = 37/57 (64%)
Frame = +3 / +3
Query: 261 KDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCW 431
KDPQ +L+ PAV+GTLNV+ + A V+RVVVTSS++AV N +V + W
Sbjct: 324 KDPQAELIDPAVKGTLNVLNSCAKASSVKRVVVTSSMAAVGYNGKPRTPDVTVDETW 494
Score = 54.7 bits (113), Expect(4) = 4e-029
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = +3 / +3
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASG+I S LV+ LL RGY V+A V DP D +T H
Sbjct: 75 VTGASGYIASWLVKFLLSRGYTVKASVRDPSDPKKTQH 188
Score = 44.6 bits (91), Expect(4) = 4e-029
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +3 / +3
Query: 414 VDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
VDE ++D + CE + +WY SKTLAE AAW
Sbjct: 480 VDETWFSDPELCEASKMWYVLSKTLAEDAAW 572
Score = 29.0 bits (57), Expect(4) = 4e-029
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +3 / +3
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASP 242
RL F+ GC GVFH ASP
Sbjct: 216 RLHLFKADLLEQGSFDSAIDGCHGVFHTASP 308
>ref|NM_121949.2| Arabidopsis thaliana alcohol dehydrogenase AT5G19440 mRNA, complete
cds
Length = 1273
Score = 56.5 bits (117), Expect(4) = 4e-029
Identities = 27/57 (47%), Positives = 37/57 (64%)
Frame = +3 / +2
Query: 261 KDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCW 431
KDPQ +L+ PAV+GTLNV+ + A V+RVVVTSS++AV N +V + W
Sbjct: 356 KDPQAELIDPAVKGTLNVLNSCAKASSVKRVVVTSSMAAVGYNGKPRTPDVTVDETW 526
Score = 54.7 bits (113), Expect(4) = 4e-029
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASG+I S LV+ LL RGY V+A V DP D +T H
Sbjct: 107 VTGASGYIASWLVKFLLSRGYTVKASVRDPSDPKKTQH 220
Score = 44.6 bits (91), Expect(4) = 4e-029
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +3 / +2
Query: 414 VDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
VDE ++D + CE + +WY SKTLAE AAW
Sbjct: 512 VDETWFSDPELCEASKMWYVLSKTLAEDAAW 604
Score = 29.0 bits (57), Expect(4) = 4e-029
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +3 / +2
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASP 242
RL F+ GC GVFH ASP
Sbjct: 248 RLHLFKADLLEQGSFDSAIDGCHGVFHTASP 340
>gb|AY088448.1| Arabidopsis thaliana clone 6748 mRNA, complete sequence
Length = 1205
Score = 56.5 bits (117), Expect(4) = 4e-029
Identities = 27/57 (47%), Positives = 37/57 (64%)
Frame = +3 / +1
Query: 261 KDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCW 431
KDPQ +L+ PAV+GTLNV+ + A V+RVVVTSS++AV N +V + W
Sbjct: 349 KDPQAELIDPAVKGTLNVLNSCAKASSVKRVVVTSSMAAVGYNGKPRTPDVTVDETW 519
Score = 54.7 bits (113), Expect(4) = 4e-029
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASG+I S LV+ LL RGY V+A V DP D +T H
Sbjct: 100 VTGASGYIASWLVKFLLSRGYTVKASVRDPSDPKKTQH 213
Score = 44.6 bits (91), Expect(4) = 4e-029
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +3 / +1
Query: 414 VDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
VDE ++D + CE + +WY SKTLAE AAW
Sbjct: 505 VDETWFSDPELCEASKMWYVLSKTLAEDAAW 597
Score = 29.0 bits (57), Expect(4) = 4e-029
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +3 / +1
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASP 242
RL F+ GC GVFH ASP
Sbjct: 241 RLHLFKADLLEQGSFDSAIDGCHGVFHTASP 333
>emb|BX833200.1|CNS09YNN Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL39ZA05 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 1140
Score = 56.5 bits (117), Expect(4) = 4e-029
Identities = 27/57 (47%), Positives = 37/57 (64%)
Frame = +3 / +3
Query: 261 KDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCW 431
KDPQ +L+ PAV+GTLNV+ + A V+RVVVTSS++AV N +V + W
Sbjct: 324 KDPQAELIDPAVKGTLNVLNSCAKASSVKRVVVTSSMAAVGYNGKPRTPDVTVDETW 494
Score = 54.7 bits (113), Expect(4) = 4e-029
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = +3 / +3
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASG+I S LV+ LL RGY V+A V DP D +T H
Sbjct: 75 VTGASGYIASWLVKFLLSRGYTVKASVRDPSDPKKTQH 188
Score = 44.6 bits (91), Expect(4) = 4e-029
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +3 / +3
Query: 414 VDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
VDE ++D + CE + +WY SKTLAE AAW
Sbjct: 480 VDETWFSDPELCEASKMWYVLSKTLAEDAAW 572
Score = 29.0 bits (57), Expect(4) = 4e-029
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +3 / +3
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASP 242
RL F+ GC GVFH ASP
Sbjct: 216 RLHLFKADLLEQGSFDSAIDGCHGVFHTASP 308
>gb|AV822159.1|AV822159 AV822159 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-02-D19 5',
mRNA sequence
Length = 663
Score = 56.5 bits (117), Expect(4) = 4e-029
Identities = 27/57 (47%), Positives = 37/57 (64%)
Frame = +3 / +3
Query: 261 KDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCW 431
KDPQ +L+ PAV+GTLNV+ + A V+RVVVTSS++AV N +V + W
Sbjct: 351 KDPQAELIDPAVKGTLNVLNSCAKASSVKRVVVTSSMAAVGYNGKPRTPDVTVDETW 521
Score = 54.7 bits (113), Expect(4) = 4e-029
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = +3 / +3
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASG+I S LV+ LL RGY V+A V DP D +T H
Sbjct: 102 VTGASGYIASWLVKFLLSRGYTVKASVRDPSDPKKTQH 215
Score = 44.6 bits (91), Expect(4) = 4e-029
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +3 / +3
Query: 414 VDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
VDE ++D + CE + +WY SKTLAE AAW
Sbjct: 507 VDETWFSDPELCEASKMWYVLSKTLAEDAAW 599
Score = 29.0 bits (57), Expect(4) = 4e-029
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +3 / +3
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASP 242
RL F+ GC GVFH ASP
Sbjct: 243 RLHLFKADLLEQGSFDSAIDGCHGVFHTASP 335
>gb|BP560824.1|BP560824 BP560824 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-07-P09 5',
mRNA sequence
Length = 657
Score = 56.5 bits (117), Expect(4) = 4e-029
Identities = 27/57 (47%), Positives = 37/57 (64%)
Frame = +3 / +1
Query: 261 KDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCW 431
KDPQ +L+ PAV+GTLNV+ + A V+RVVVTSS++AV N +V + W
Sbjct: 346 KDPQAELIDPAVKGTLNVLNSCAKASSVKRVVVTSSMAAVGYNGKPRTPDVTVDETW 516
Score = 54.7 bits (113), Expect(4) = 4e-029
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASG+I S LV+ LL RGY V+A V DP D +T H
Sbjct: 97 VTGASGYIASWLVKFLLSRGYTVKASVRDPSDPKKTQH 210
Score = 44.6 bits (91), Expect(4) = 4e-029
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +3 / +1
Query: 414 VDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
VDE ++D + CE + +WY SKTLAE AAW
Sbjct: 502 VDETWFSDPELCEASKMWYVLSKTLAEDAAW 594
Score = 29.0 bits (57), Expect(4) = 4e-029
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +3 / +1
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASP 242
RL F+ GC GVFH ASP
Sbjct: 238 RLHLFKADLLEQGSFDSAIDGCHGVFHTASP 330
>gb|CB252385.1|CB252385 27-E013702-019-004-B01Q-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768B014Q 5-PRIME, mRNA sequence
Length = 643
Score = 56.5 bits (117), Expect(4) = 4e-029
Identities = 27/57 (47%), Positives = 37/57 (64%)
Frame = +3 / +1
Query: 261 KDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCW 431
KDPQ +L+ PAV+GTLNV+ + A V+RVVVTSS++AV N +V + W
Sbjct: 337 KDPQAELIDPAVKGTLNVLNSCAKASSVKRVVVTSSMAAVGYNGKPRTPDVTVDETW 507
Score = 54.7 bits (113), Expect(4) = 4e-029
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASG+I S LV+ LL RGY V+A V DP D +T H
Sbjct: 88 VTGASGYIASWLVKFLLSRGYTVKASVRDPSDPKKTQH 201
Score = 44.6 bits (91), Expect(4) = 4e-029
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +3 / +1
Query: 414 VDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
VDE ++D + CE + +WY SKTLAE AAW
Sbjct: 493 VDETWFSDPELCEASKMWYVLSKTLAEDAAW 585
Score = 29.0 bits (57), Expect(4) = 4e-029
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +3 / +1
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASP 242
RL F+ GC GVFH ASP
Sbjct: 229 RLHLFKADLLEQGSFDSAIDGCHGVFHTASP 321
>gb|AV532425.1|AV532425 AV532425 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB042a07F 3', mRNA sequence
Length = 612
Score = 56.5 bits (117), Expect(4) = 4e-029
Identities = 27/57 (47%), Positives = 37/57 (64%)
Frame = +3 / +2
Query: 261 KDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCW 431
KDPQ +L+ PAV+GTLNV+ + A V+RVVVTSS++AV N +V + W
Sbjct: 356 KDPQAELIDPAVKGTLNVLNSCAKASSVKRVVVTSSMAAVGYNGKPRTPDVTVDETW 526
Score = 54.7 bits (113), Expect(4) = 4e-029
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASG+I S LV+ LL RGY V+A V DP D +T H
Sbjct: 107 VTGASGYIASWLVKFLLSRGYTVKASVRDPSDPKKTQH 220
Score = 44.6 bits (91), Expect(4) = 4e-029
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +3 / +2
Query: 414 VDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
VDE ++D + CE + +WY SKTLAE AAW
Sbjct: 512 VDETWFSDPELCEASKMWYVLSKTLAEDAAW 604
Score = 29.0 bits (57), Expect(4) = 4e-029
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +3 / +2
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASP 242
RL F+ GC GVFH ASP
Sbjct: 248 RLHLFKADLLEQGSFDSAIDGCHGVFHTASP 340
>gb|CB253432.1|CB253432 01-E012999-019-004-B01-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768B014Q 5-PRIME, mRNA sequence
Length = 603
Score = 56.5 bits (117), Expect(4) = 4e-029
Identities = 27/57 (47%), Positives = 37/57 (64%)
Frame = +3 / +1
Query: 261 KDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCW 431
KDPQ +L+ PAV+GTLNV+ + A V+RVVVTSS++AV N +V + W
Sbjct: 337 KDPQAELIDPAVKGTLNVLNSCAKASSVKRVVVTSSMAAVGYNGKPRTPDVTVDETW 507
Score = 54.7 bits (113), Expect(4) = 4e-029
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASG+I S LV+ LL RGY V+A V DP D +T H
Sbjct: 88 VTGASGYIASWLVKFLLSRGYTVKASVRDPSDPKKTQH 201
Score = 44.6 bits (91), Expect(4) = 4e-029
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +3 / +1
Query: 414 VDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
VDE ++D + CE + +WY SKTLAE AAW
Sbjct: 493 VDETWFSDPELCEASKMWYVLSKTLAEDAAW 585
Score = 29.0 bits (57), Expect(4) = 4e-029
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +3 / +1
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASP 242
RL F+ GC GVFH ASP
Sbjct: 229 RLHLFKADLLEQGSFDSAIDGCHGVFHTASP 321
>gb|BU635054.1|BU635054 015C09 Infected Arabidopsis Leaf Arabidopsis thaliana cDNA, mRNA
sequence
Length = 666
Score = 59.7 bits (124), Expect(3) = 3e-026
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = +3 / +1
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVW 467
V+RVV SS+SAV NP W +V+DE W+D DYC+K W
Sbjct: 382 VKRVVYVSSVSAVAMNPMWSKSQVLDETAWSDQDYCKKTENW 507
Score = 59.7 bits (124), Expect(3) = 3e-026
Identities = 28/72 (38%), Positives = 39/72 (54%)
Frame = +3 / +1
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
+L F+ GCSGVFH+A P V +P+ L+ PAV+GTLNV++A
Sbjct: 193 KLKLFKADLLNYGSLQSAIAGCSGVFHVACPVPSASVPNPEVDLIAPAVDGTLNVLKACV 372
Query: 330 DAGGVRRVVVTS 365
+A R V V+S
Sbjct: 373 EAKVKRVVYVSS 408
Score = 38.2 bits (77), Expect(3) = 3e-026
Identities = 17/30 (56%), Positives = 19/30 (63%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDP 92
VTGA GF+GS +V LL R Y V V DP
Sbjct: 55 VTGAGGFLGSWVVNHLLSRDYFVHGTVRDP 144
>gb|CD529311.1|CD529311 02H15 Arabidopsis Leaf Senescence Library Arabidopsis thaliana cDNA
3', mRNA sequence
Length = 449
Score = 73.0 bits (153), Expect(3) = 2e-025
Identities = 28/52 (53%), Positives = 39/52 (75%)
Frame = +3 / +1
Query: 210 GCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTS 365
GC+GVFH+ASPCT+DP DP+ +L+ PAV+GT+NV+ A K R V+ +S
Sbjct: 244 GCAGVFHVASPCTLDPPVDPEKELVEPAVKGTINVLEAAKRFNVRRVVITSS 399
Score = 45.5 bits (93), Expect(3) = 2e-025
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +3 / +1
Query: 342 VRRVVVTSSISAVVPNPGWP 401
VRRVV+TSSISA+VPNP WP
Sbjct: 373 VRRVVITSSISALVPNPNWP 432
Score = 35.4 bits (71), Expect(3) = 2e-025
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGY 65
VTGA+GFIGS ++R L+ +GY
Sbjct: 49 VTGANGFIGSWIIRTLIEKGY 111
>gb|AV828474.1|AV828474 AV828474 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-28-H16 5',
mRNA sequence
Length = 579
Score = 59.7 bits (124), Expect(3) = 2e-025
Identities = 28/72 (38%), Positives = 39/72 (54%)
Frame = +3 / +1
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
+L F+ GCSGVFH+A P V +P+ L+ PAV+GTLNV++A
Sbjct: 277 KLKLFKADLLNYGSLQSAIAGCSGVFHVACPVPSASVPNPEVDLIAPAVDGTLNVLKACV 456
Query: 330 DAGGVRRVVVTS 365
+A R V V+S
Sbjct: 457 EAKVKRVVYVSS 492
Score = 57.0 bits (118), Expect(3) = 2e-025
Identities = 21/38 (55%), Positives = 27/38 (71%)
Frame = +3 / +1
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEK 455
V+RVV SS+SAV NP W +V+DE W+D DYC+K
Sbjct: 466 VKRVVYVSSVSAVAMNPMWSKSQVLDETAWSDQDYCKK 579
Score = 38.2 bits (77), Expect(3) = 2e-025
Identities = 17/30 (56%), Positives = 19/30 (63%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDP 92
VTGA GF+GS +V LL R Y V V DP
Sbjct: 139 VTGAGGFLGSWVVNHLLSRDYFVHGTVRDP 228
>gb|AV552812.1|AV552812 AV552812 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ39b08R 5', mRNA sequence
Length = 564
Score = 51.0 bits (105), Expect(4) = 9e-025
Identities = 21/42 (50%), Positives = 29/42 (69%)
Frame = +3 / +1
Query: 258 VKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVV 383
V DPQ +++ PAV GTLNV+R V+RV+VTSS +A +
Sbjct: 283 VTDPQTEMIDPAVNGTLNVLRTCAKVSSVKRVIVTSSTAATL 408
Score = 49.2 bits (101), Expect(4) = 9e-025
Identities = 22/38 (57%), Positives = 28/38 (73%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASG+I S +V+ LL RGY VRA V +P D +T+H
Sbjct: 37 VTGASGYIASWIVKLLLLRGYTVRATVRNPMDTKKTNH 150
Score = 39.1 bits (79), Expect(4) = 9e-025
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3 / +1
Query: 408 EVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
+VVDE +TD+ WY SKTLAE+ AW
Sbjct: 424 DVVDETVFTDLSVYLAMKAWYGYSKTLAEETAW 522
Score = 30.4 bits (60), Expect(4) = 9e-025
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = +3 / +1
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTV 251
RL F+ GC GVFH ASP ++
Sbjct: 178 RLKLFKSDLLEEGSFDQAIEGCDGVFHTASPVSL 279
>ref|NM_105351.2| Arabidopsis thaliana alcohol dehydrogenase/ cinnamyl-alcohol
dehydrogenase AT1G66800 mRNA, complete cds
Length = 1128
Score = 51.0 bits (105), Expect(4) = 1e-024
Identities = 21/42 (50%), Positives = 29/42 (69%)
Frame = +3 / +3
Query: 258 VKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVV 383
V DPQ +++ PAV GTLNV+R V+RV+VTSS +A +
Sbjct: 315 VTDPQTEMIDPAVNGTLNVLRTCAKVSSVKRVIVTSSTAATL 440
Score = 49.2 bits (101), Expect(4) = 1e-024
Identities = 22/38 (57%), Positives = 28/38 (73%)
Frame = +3 / +3
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASG+I S +V+ LL RGY VRA V +P D +T+H
Sbjct: 69 VTGASGYIASWIVKLLLLRGYTVRATVRNPMDTKKTNH 182
Score = 39.1 bits (79), Expect(4) = 1e-024
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3 / +3
Query: 408 EVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
+VVDE +TD+ WY SKTLAE+ AW
Sbjct: 456 DVVDETVFTDLSVYLAMKAWYGYSKTLAEETAW 554
Score = 30.4 bits (60), Expect(4) = 1e-024
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = +3 / +3
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTV 251
RL F+ GC GVFH ASP ++
Sbjct: 210 RLKLFKSDLLEEGSFDQAIEGCDGVFHTASPVSL 311
>ref|NM_119708.2| Arabidopsis thaliana unknown protein AT4G35420 mRNA, complete cds
Length = 1135
Score = 50.6 bits (104), Expect(4) = 3e-024
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +3 / +3
Query: 414 VDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
+DE WT ++ C++ VWY SKTLAE+AAW
Sbjct: 438 LDESIWTSVELCKRFQVWYALSKTLAEQAAW 530
Score = 49.6 bits (102), Expect(4) = 3e-024
Identities = 19/42 (45%), Positives = 31/42 (73%)
Frame = +3 / +3
Query: 255 PVKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAV 380
P +P+ +++ PA+EGTLNV+R+ + ++RVV+TSS S V
Sbjct: 279 PTSNPEEEILRPAIEGTLNVLRSCRKNPSLKRVVLTSSSSTV 404
Score = 40.9 bits (83), Expect(4) = 3e-024
Identities = 19/38 (50%), Positives = 23/38 (60%)
Frame = +3 / +3
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASGF+ S LV+ LL GY V V DP + + H
Sbjct: 36 VTGASGFLASWLVKRLLLEGYEVIGTVRDPGNEKKLAH 149
Score = 27.2 bits (53), Expect(4) = 3e-024
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3 / +3
Query: 210 GCSGVFHLASP 242
GC GVFH ASP
Sbjct: 237 GCQGVFHTASP 269
>gb|BT022119.1| Arabidopsis thaliana At4g35420 mRNA, complete cds
Length = 1060
Score = 50.6 bits (104), Expect(4) = 3e-024
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +3 / +2
Query: 414 VDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
+DE WT ++ C++ VWY SKTLAE+AAW
Sbjct: 434 LDESIWTSVELCKRFQVWYALSKTLAEQAAW 526
Score = 49.6 bits (102), Expect(4) = 3e-024
Identities = 19/42 (45%), Positives = 31/42 (73%)
Frame = +3 / +2
Query: 255 PVKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAV 380
P +P+ +++ PA+EGTLNV+R+ + ++RVV+TSS S V
Sbjct: 275 PTSNPEEEILRPAIEGTLNVLRSCRKNPSLKRVVLTSSSSTV 400
Score = 40.9 bits (83), Expect(4) = 3e-024
Identities = 19/38 (50%), Positives = 23/38 (60%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASGF+ S LV+ LL GY V V DP + + H
Sbjct: 32 VTGASGFLASWLVKRLLLEGYEVIGTVRDPGNEKKLAH 145
Score = 27.2 bits (53), Expect(4) = 3e-024
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3 / +2
Query: 210 GCSGVFHLASP 242
GC GVFH ASP
Sbjct: 233 GCQGVFHTASP 265
>gb|BU635464.1|BU635464 023D12 Infected Arabidopsis Leaf Arabidopsis thaliana cDNA, mRNA
sequence
Length = 655
Score = 73.5 bits (154), Expect(2) = 3e-024
Identities = 29/55 (52%), Positives = 36/55 (65%)
Frame = +3 / +3
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
V+RVV SS+SAV NP W +V+DE W+D DYC+K WY SKT AE A+
Sbjct: 255 VKRVVYVSSVSAVAMNPMWSKSQVLDETAWSDQDYCKKTENWYSLSKTRAESEAF 419
Score = 59.7 bits (124), Expect(2) = 3e-024
Identities = 28/72 (38%), Positives = 39/72 (54%)
Frame = +3 / +3
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
+L F+ GCSGVFH+A P V +P+ L+ PAV+GTLNV++A
Sbjct: 66 KLKLFKADLLNYGSLQSAIAGCSGVFHVACPVPSASVPNPEVDLIAPAVDGTLNVLKACV 245
Query: 330 DAGGVRRVVVTS 365
+A R V V+S
Sbjct: 246 EAKVKRVVYVSS 281
>ref|NM_101463.2| Arabidopsis thaliana CCR1 (CINNAMOYL COA REDUCTASE 1) AT1G15950
(CCR1) mRNA, complete cds
Length = 1386
Score = 72.5 bits (152), Expect(3) = 5e-024
Identities = 28/55 (50%), Positives = 37/55 (67%)
Frame = +3 / +3
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
V+RVV+TSSI AV +P VVDE CW+D+D+C+ WY K +AE+AAW
Sbjct: 456 VKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAW 620
Score = 44.1 bits (90), Expect(3) = 5e-024
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +3 / +3
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAET 110
VTGA G+I S +V+ LL RGY V+ V +PDD T
Sbjct: 144 VTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNT 251
Score = 33.6 bits (67), Expect(3) = 5e-024
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +3 / +3
Query: 210 GCSGVFHLASPCTVDP 257
GC GVFH ASP T DP
Sbjct: 342 GCDGVFHTASPVTDDP 389
>gb|AY087316.1| Arabidopsis thaliana clone 34141 mRNA, complete sequence
Length = 1370
Score = 72.5 bits (152), Expect(3) = 5e-024
Identities = 28/55 (50%), Positives = 37/55 (67%)
Frame = +3 / +1
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
V+RVV+TSSI AV +P VVDE CW+D+D+C+ WY K +AE+AAW
Sbjct: 457 VKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAW 621
Score = 44.1 bits (90), Expect(3) = 5e-024
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAET 110
VTGA G+I S +V+ LL RGY V+ V +PDD T
Sbjct: 145 VTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNT 252
Score = 33.6 bits (67), Expect(3) = 5e-024
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +3 / +1
Query: 210 GCSGVFHLASPCTVDP 257
GC GVFH ASP T DP
Sbjct: 343 GCDGVFHTASPVTDDP 390
>emb|BX815742.1|CNS0ABF5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS8ZF03 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1338
Score = 72.5 bits (152), Expect(3) = 5e-024
Identities = 28/55 (50%), Positives = 37/55 (67%)
Frame = +3 / +2
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
V+RVV+TSSI AV +P VVDE CW+D+D+C+ WY K +AE+AAW
Sbjct: 437 VKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAW 601
Score = 44.1 bits (90), Expect(3) = 5e-024
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAET 110
VTGA G+I S +V+ LL RGY V+ V +PDD T
Sbjct: 125 VTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNT 232
Score = 33.6 bits (67), Expect(3) = 5e-024
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +3 / +2
Query: 210 GCSGVFHLASPCTVDP 257
GC GVFH ASP T DP
Sbjct: 323 GCDGVFHTASPVTDDP 370
>emb|BX815700.1|CNS0ABD9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS85ZF05 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1314
Score = 72.5 bits (152), Expect(3) = 5e-024
Identities = 28/55 (50%), Positives = 37/55 (67%)
Frame = +3 / +2
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
V+RVV+TSSI AV +P VVDE CW+D+D+C+ WY K +AE+AAW
Sbjct: 437 VKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAW 601
Score = 44.1 bits (90), Expect(3) = 5e-024
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAET 110
VTGA G+I S +V+ LL RGY V+ V +PDD T
Sbjct: 125 VTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNT 232
Score = 33.6 bits (67), Expect(3) = 5e-024
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +3 / +2
Query: 210 GCSGVFHLASPCTVDP 257
GC GVFH ASP T DP
Sbjct: 323 GCDGVFHTASPVTDDP 370
>emb|BX815831.1|CNS0AAHT Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH11ZC11 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1305
Score = 72.5 bits (152), Expect(3) = 5e-024
Identities = 28/55 (50%), Positives = 37/55 (67%)
Frame = +3 / +2
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
V+RVV+TSSI AV +P VVDE CW+D+D+C+ WY K +AE+AAW
Sbjct: 437 VKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAW 601
Score = 44.1 bits (90), Expect(3) = 5e-024
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAET 110
VTGA G+I S +V+ LL RGY V+ V +PDD T
Sbjct: 125 VTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNT 232
Score = 33.6 bits (67), Expect(3) = 5e-024
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +3 / +2
Query: 210 GCSGVFHLASPCTVDP 257
GC GVFH ASP T DP
Sbjct: 323 GCDGVFHTASPVTDDP 370
>emb|BX815406.1|CNS0ABFH Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS58ZD09 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1305
Score = 72.5 bits (152), Expect(3) = 5e-024
Identities = 28/55 (50%), Positives = 37/55 (67%)
Frame = +3 / +2
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
V+RVV+TSSI AV +P VVDE CW+D+D+C+ WY K +AE+AAW
Sbjct: 410 VKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKSTKNWYCYGKMVAEQAAW 574
Score = 44.1 bits (90), Expect(3) = 5e-024
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAET 110
VTGA G+I S +V+ LL RGY V+ V +PDD T
Sbjct: 98 VTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNT 205
Score = 33.6 bits (67), Expect(3) = 5e-024
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +3 / +2
Query: 210 GCSGVFHLASPCTVDP 257
GC GVFH ASP T DP
Sbjct: 296 GCDGVFHTASPVTDDP 343
>emb|BX815739.1|CNS0ABDT Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS8ZE04 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1292
Score = 72.5 bits (152), Expect(3) = 5e-024
Identities = 28/55 (50%), Positives = 37/55 (67%)
Frame = +3 / +2
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
V+RVV+TSSI AV +P VVDE CW+D+D+C+ WY K +AE+AAW
Sbjct: 410 VKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAW 574
Score = 44.1 bits (90), Expect(3) = 5e-024
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAET 110
VTGA G+I S +V+ LL RGY V+ V +PDD T
Sbjct: 98 VTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNT 205
Score = 33.6 bits (67), Expect(3) = 5e-024
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +3 / +2
Query: 210 GCSGVFHLASPCTVDP 257
GC GVFH ASP T DP
Sbjct: 296 GCDGVFHTASPVTDDP 343
>emb|BX816709.1|CNS0ABPI Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH64ZG07 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1291
Score = 72.5 bits (152), Expect(3) = 5e-024
Identities = 28/55 (50%), Positives = 37/55 (67%)
Frame = +3 / +2
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
V+RVV+TSSI AV +P VVDE CW+D+D+C+ WY K +AE+AAW
Sbjct: 410 VKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAW 574
Score = 44.1 bits (90), Expect(3) = 5e-024
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAET 110
VTGA G+I S +V+ LL RGY V+ V +PDD T
Sbjct: 98 VTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNT 205
Score = 33.6 bits (67), Expect(3) = 5e-024
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +3 / +2
Query: 210 GCSGVFHLASPCTVDP 257
GC GVFH ASP T DP
Sbjct: 296 GCDGVFHTASPVTDDP 343
>gb|AF320624.1|AF320624 Arabidopsis thaliana cinnamoyl CoA reductase isoform 1 (CCR1) mRNA,
complete cds
Length = 1269
Score = 72.5 bits (152), Expect(3) = 5e-024
Identities = 28/55 (50%), Positives = 37/55 (67%)
Frame = +3 / +1
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
V+RVV+TSSI AV +P VVDE CW+D+D+C+ WY K +AE+AAW
Sbjct: 355 VKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAW 519
Score = 44.1 bits (90), Expect(3) = 5e-024
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAET 110
VTGA G+I S +V+ LL RGY V+ V +PDD T
Sbjct: 43 VTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNT 150
Score = 33.6 bits (67), Expect(3) = 5e-024
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +3 / +1
Query: 210 GCSGVFHLASPCTVDP 257
GC GVFH ASP T DP
Sbjct: 241 GCDGVFHTASPVTDDP 288
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 442,351,394
Number of Sequences: 1013581
Number of extensions: 3805223
Number of successful extensions: 103772
Number of sequences better than 1.0e-020: 79
length of database: 302,980,290
effective HSP length: 54
effective length of database: 248,246,916
effective search space used: 28300148424
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)