TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2969865.2.1
(675 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|F20137.1|F20137 ATTS6176 AC16H Arabidopsis thaliana cDNA... 215 8e-055
gb|CK118493.1|CK118493 216o12.p1 AtM1 Arabidopsis thaliana ... 215 8e-055
gb|BP562727.2|BP562727 BP562727 RAFL14 Arabidopsis thaliana... 215 8e-055
gb|CB254025.1|CB254025 80-E015391-019-006-O19-T7R MPIZ-ADIS... 215 8e-055
gb|BT004783.1| Arabidopsis thaliana At2g47640 gene, complet... 215 8e-055
emb|BX821379.1|CNS0AA65 Arabidopsis thaliana Full-length cD... 215 8e-055
ref|NM_116149.2| Arabidopsis thaliana unknown protein AT3G6... 215 8e-055
ref|NM_180146.3| Arabidopsis thaliana unknown protein AT2G4... 215 8e-055
ref|NM_201981.2| Arabidopsis thaliana unknown protein AT2G4... 215 8e-055
gb|AI998209.1|AI998209 701515770 A. thaliana, Columbia Col-... 215 2e-054
gb|AV533116.1|AV533116 AV533116 Arabidopsis thaliana flower... 215 2e-054
gb|AY086601.1| Arabidopsis thaliana clone 26123 mRNA, compl... 215 2e-054
gb|AY087177.1| Arabidopsis thaliana clone 32457 mRNA, compl... 215 2e-054
ref|NM_130332.2| Arabidopsis thaliana unknown protein AT2G4... 215 2e-054
gb|CB264605.1|CB264605 49-E014658-035-002-A13-T7R MPIZ-ADIS... 212 1e-053
gb|AU226468.1|AU226468 AU226468 RAFL14 Arabidopsis thaliana... 205 1e-051
gb|BP571612.1|BP571612 BP571612 RAFL14 Arabidopsis thaliana... 203 4e-051
emb|AL162651.1|ATF26K9 Arabidopsis thaliana DNA chromosome ... 129 7e-050
gb|BP613407.1|BP613407 BP613407 RAFL16 Arabidopsis thaliana... 173 2e-049
gb|AV819279.1|AV819279 AV819279 RAFL11 Arabidopsis thaliana... 191 2e-047
gb|BP864880.1|BP864880 BP864880 RAFL21 Arabidopsis thaliana... 191 2e-047
gb|BP866835.1|BP866835 BP866835 RAFL21 Arabidopsis thaliana... 188 2e-046
gb|BP581041.1|BP581041 BP581041 RAFL14 Arabidopsis thaliana... 116 9e-043
gb|BP821598.1|BP821598 BP821598 RAFL19 Arabidopsis thaliana... 175 2e-042
gb|BP815339.1|BP815339 BP815339 RAFL19 Arabidopsis thaliana... 155 3e-042
gb|AC002535.3| Arabidopsis thaliana chromosome 2 clone T30B... 93 2e-041
gb|AC005309.3| Arabidopsis thaliana chromosome 2 clone F17A... 93 2e-041
gb|AI999102.1|AI999102 701554462 A. thaliana, Columbia Col-... 170 5e-041
gb|BP788381.1|BP788381 BP788381 RAFL7 Arabidopsis thaliana ... 163 6e-039
gb|BP665200.1|BP665200 BP665200 RAFL21 Arabidopsis thaliana... 95 1e-038
gb|BP854615.1|BP854615 BP854615 RAFL21 Arabidopsis thaliana... 159 1e-037
gb|BP621376.1|BP621376 BP621376 RAFL16 Arabidopsis thaliana... 158 2e-037
gb|AV832022.1|AV832022 AV832022 RAFL11 Arabidopsis thaliana... 139 8e-037
gb|AY042797.1| Arabidopsis thaliana small nuclear ribonucle... 139 8e-037
gb|BP851888.1|BP851888 BP851888 RAFL21 Arabidopsis thaliana... 155 1e-036
gb|AV818857.1|AV818857 AV818857 RAFL11 Arabidopsis thaliana... 139 1e-036
gb|BP636278.1|BP636278 BP636278 RAFL18 Arabidopsis thaliana... 83 1e-035
gb|AV549536.1|AV549536 AV549536 Arabidopsis thaliana roots ... 150 4e-035
gb|BP650469.1|BP650469 BP650469 RAFL19 Arabidopsis thaliana... 95 1e-034
gb|BP869127.1|BP869127 BP869127 RAFL21 Arabidopsis thaliana... 148 2e-034
gb|BP858325.1|BP858325 BP858325 RAFL21 Arabidopsis thaliana... 100 2e-034
gb|AV820625.1|AV820625 AV820625 RAFL11 Arabidopsis thaliana... 122 7e-033
gb|BP831765.1|BP831765 BP831765 RAFL19 Arabidopsis thaliana... 141 2e-032
gb|BP623210.1|BP623210 BP623210 RAFL17 Arabidopsis thaliana... 139 9e-032
gb|H36625.1|H36625 14293 Lambda-PRL2 Arabidopsis thaliana c... 136 1e-031
gb|BP864529.1|BP864529 BP864529 RAFL21 Arabidopsis thaliana... 119 2e-031
gb|BP851641.1|BP851641 BP851641 RAFL21 Arabidopsis thaliana... 109 1e-030
gb|BP868432.1|BP868432 BP868432 RAFL21 Arabidopsis thaliana... 115 4e-030
gb|BP867804.1|BP867804 BP867804 RAFL21 Arabidopsis thaliana... 133 5e-030
gb|BP844944.1|BP844944 BP844944 RAFL21 Arabidopsis thaliana... 113 7e-030
gb|BP850718.1|BP850718 BP850718 RAFL21 Arabidopsis thaliana... 130 4e-029
gb|BP848760.1|BP848760 BP848760 RAFL21 Arabidopsis thaliana... 71 5e-029
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 129 7e-029
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 129 7e-029
gb|BP597520.1|BP597520 BP597520 RAFL15 Arabidopsis thaliana... 123 4e-027
gb|BZ379263.1|BZ379263 SALK_113104.21.35.x Arabidopsis thal... 76 1e-024
gb|BP670363.1|BP670363 BP670363 RAFL21 Arabidopsis thaliana... 95 4e-021
gb|AV535104.1|AV535104 AV535104 Arabidopsis thaliana flower... 104 4e-021
>gb|F20137.1|F20137 ATTS6176 AC16H Arabidopsis thaliana cDNA clone TAP0004 similar to
Homo sapiens., mRNA sequence
Length = 574
Score = 215 bits (465), Expect = 8e-055
Identities = 91/106 (85%), Positives = 94/106 (88%)
Frame = +3 / +2
Query: 87 PMAXXXXXXXXXXXFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 266
PM F+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLEN
Sbjct: 101 PMEEDTNGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLEN 280
Query: 267 VREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 404
VREMWTEVPKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 281 VREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 418
Score = 178 bits (384), Expect = 1e-043
Identities = 77/96 (80%), Positives = 84/96 (87%)
Frame = -3 / -2
Query: 424 SLRVQATHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ 245
SL + ++HFGFLRT+MTESPRRNILLMN SLFTG AFFLP PVFGTSVHISLTFSRTMLQ
Sbjct: 438 SLSLSSSHFGFLRTIMTESPRRNILLMNRSLFTGSAFFLPFPVFGTSVHISLTFSRTMLQ 259
Query: 244 CRSKARTRPSNFLLFRQLIRTWVLFLTLIMSTERGP 137
C S A TRP +FLLFRQLI+T VLFLTLI+ TE GP
Sbjct: 258 CLSNALTRPRSFLLFRQLIKT*VLFLTLIIRTESGP 151
Score = 140 bits (301), Expect = 3e-032
Identities = 56/105 (53%), Positives = 74/105 (70%)
Frame = -2 / -1
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
SF +PED++DR+ T +HLAYEP+ VHR+ LLAF R L PHL ++ KNHVAV ++ H
Sbjct: 418 SFWIPEDDNDRVST*KHLAYEPISVHRKCFLLAFPSFRNLSPHLSDIFKNHVAVSVKRPH 239
Query: 224 ATKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFLLFYVGFFRH 90
+ K+ VVPA+D NL +ILDAHH++RE G E LFL +G H
Sbjct: 238 SAKKFPVVPAID*NLSVILDAHHKNREWPGVEFLFLSLAIGILFH 104
Score = 127 bits (272), Expect = 3e-028
Identities = 59/113 (52%), Positives = 75/113 (66%)
Frame = +2 / +1
Query: 86 AHGGRNQHKKGGRGVQHRSSLGAHDERQE*YPGSYQLPEQQEVAWSRASLRSALQHGS*E 265
A+G Q + GRG+QHR++L ++DERQE*+ G QLPEQQE +W + LQHGS*+
Sbjct: 100 ANGRGYQWQD*GRGIQHRATLCSYDERQE*HSGFNQLPEQQETSWPSEGV*QTLQHGS*K 279
Query: 266 R*GDVDRGTEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQEPEMSSLYT*R 424
DVD G+E+ RQEE + GEQ VHKQDV W GH+ PQE +M T*R
Sbjct: 280 CQRDVD*GSENWERQEESTSGEQRSVHKQDVSTWRLGHYRPQESKMRGRET*R 438
>gb|CK118493.1|CK118493 216o12.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011O12216
5-PRIME, mRNA sequence
Length = 582
Score = 215 bits (465), Expect = 8e-055
Identities = 91/106 (85%), Positives = 94/106 (88%)
Frame = +3 / +2
Query: 87 PMAXXXXXXXXXXXFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 266
PM F+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLEN
Sbjct: 113 PMEEDTNGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLEN 292
Query: 267 VREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 404
VREMWTEVPKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 293 VREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 430
Score = 178 bits (384), Expect = 1e-043
Identities = 77/96 (80%), Positives = 84/96 (87%)
Frame = -3 / -1
Query: 424 SLRVQATHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ 245
SL + ++HFGFLRT+MTESPRRNILLMN SLFTG AFFLP PVFGTSVHISLTFSRTMLQ
Sbjct: 450 SLSLSSSHFGFLRTIMTESPRRNILLMNRSLFTGSAFFLPFPVFGTSVHISLTFSRTMLQ 271
Query: 244 CRSKARTRPSNFLLFRQLIRTWVLFLTLIMSTERGP 137
C S A TRP +FLLFRQLI+T VLFLTLI+ TE GP
Sbjct: 270 CLSNALTRPRSFLLFRQLIKT*VLFLTLIIRTESGP 163
Score = 140 bits (300), Expect = 5e-032
Identities = 56/105 (53%), Positives = 74/105 (70%)
Frame = -2 / -3
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
SF +PED++DR+ T +HLAYEP+ VHR+ LLAF R L PHL ++ KNHVAV ++ H
Sbjct: 430 SFWIPEDDNDRVST*KHLAYEPISVHRKCFLLAFPSFRNLSPHLSDIFKNHVAVSVKRPH 251
Query: 224 ATKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFLLFYVGFFRH 90
+ K+ VVPA+D NL +ILDAHH++RE G E LFL +G H
Sbjct: 250 SPKKFPVVPAID*NLSVILDAHHKNREWPGVEFLFLSLAIGILFH 116
Score = 128 bits (274), Expect = 2e-028
Identities = 59/113 (52%), Positives = 76/113 (67%)
Frame = +2 / +1
Query: 86 AHGGRNQHKKGGRGVQHRSSLGAHDERQE*YPGSYQLPEQQEVAWSRASLRSALQHGS*E 265
A+G Q + GRG+QHR++L ++DERQE*+ G QLPEQQE +W+ + LQHGS*+
Sbjct: 112 ANGRGYQWQD*GRGIQHRATLCSYDERQE*HSGFNQLPEQQETSWASEGV*QTLQHGS*K 291
Query: 266 R*GDVDRGTEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQEPEMSSLYT*R 424
DVD G+E+ RQEE + GEQ VHKQDV W GH+ PQE +M T*R
Sbjct: 292 CQRDVD*GSENWERQEESTSGEQRSVHKQDVSTWRLGHYRPQESKMRGRET*R 450
>gb|BP562727.2|BP562727 BP562727 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-35-O15 5',
mRNA sequence
Length = 491
Score = 215 bits (465), Expect = 8e-055
Identities = 91/106 (85%), Positives = 94/106 (88%)
Frame = +3 / +2
Query: 87 PMAXXXXXXXXXXXFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 266
PM F+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLEN
Sbjct: 107 PMEEDTNGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLEN 286
Query: 267 VREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 404
VREMWTEVPKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 287 VREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 424
Score = 176 bits (379), Expect = 6e-043
Identities = 76/96 (79%), Positives = 83/96 (86%)
Frame = -3 / -3
Query: 424 SLRVQATHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ 245
S + ++HFGFLRT+MTESPRRNILLMN SLFTG AFFLP PVFGTSVHISLTFSRTMLQ
Sbjct: 444 SXSLSSSHFGFLRTIMTESPRRNILLMNRSLFTGSAFFLPFPVFGTSVHISLTFSRTMLQ 265
Query: 244 CRSKARTRPSNFLLFRQLIRTWVLFLTLIMSTERGP 137
C S A TRP +FLLFRQLI+T VLFLTLI+ TE GP
Sbjct: 264 CLSNALTRPRSFLLFRQLIKT*VLFLTLIIRTESGP 157
Score = 140 bits (300), Expect = 5e-032
Identities = 56/105 (53%), Positives = 74/105 (70%)
Frame = -2 / -2
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
SF +PED++DR+ T +HLAYEP+ VHR+ LLAF R L PHL ++ KNHVAV ++ H
Sbjct: 424 SFWIPEDDNDRVST*KHLAYEPISVHRKCFLLAFPSFRNLSPHLSDIFKNHVAVSVKRPH 245
Query: 224 ATKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFLLFYVGFFRH 90
+ K+ VVPA+D NL +ILDAHH++RE G E LFL +G H
Sbjct: 244 SPKKFPVVPAID*NLSVILDAHHKNREWPGVEFLFLSLAIGILFH 110
Score = 126 bits (269), Expect = 9e-028
Identities = 58/113 (51%), Positives = 75/113 (66%)
Frame = +2 / +1
Query: 86 AHGGRNQHKKGGRGVQHRSSLGAHDERQE*YPGSYQLPEQQEVAWSRASLRSALQHGS*E 265
A+G Q + GRG+QHR++L ++DERQE*+ G QLPEQQE +W+ + LQHGS*+
Sbjct: 106 ANGRGYQWQD*GRGIQHRATLCSYDERQE*HSGFNQLPEQQETSWASEGV*QTLQHGS*K 285
Query: 266 R*GDVDRGTEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQEPEMSSLYT*R 424
DVD G+E+ RQEE + GEQ VHKQDV W GH+ PQE +M T R
Sbjct: 286 CQRDVD*GSENWERQEESTSGEQRSVHKQDVSTWRLGHYRPQESKMRGRETXR 444
>gb|CB254025.1|CB254025 80-E015391-019-006-O19-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768O196Q 5-PRIME, mRNA sequence
Length = 535
Score = 215 bits (465), Expect = 8e-055
Identities = 91/106 (85%), Positives = 94/106 (88%)
Frame = +3 / +1
Query: 87 PMAXXXXXXXXXXXFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 266
PM F+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLEN
Sbjct: 88 PMEEDTNGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLEN 267
Query: 267 VREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 404
VREMWTEVPKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 268 VREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 405
Score = 168 bits (362), Expect = 1e-040
Identities = 73/89 (82%), Positives = 76/89 (85%)
Frame = -3 / -3
Query: 403 HFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKART 224
H GFLRT+MTESPRRNILLMN SL TGRAFF P PVFGTSVHISLTFSRTMLQC SKA T
Sbjct: 404 HLGFLRTIMTESPRRNILLMNRSLLTGRAFFFPFPVFGTSVHISLTFSRTMLQCLSKALT 225
Query: 223 RPSNFLLFRQLIRTWVLFLTLIMSTERGP 137
RP +FLL RQLI T VLFLTLI+ TE GP
Sbjct: 224 RPRSFLLLRQLINT*VLFLTLIIKTESGP 138
Score = 122 bits (262), Expect = 8e-027
Identities = 49/105 (46%), Positives = 73/105 (69%)
Frame = -2 / -2
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
S VPED++D + T+EHLA E + V+R+S LL+F+G R L PH ++ KNHVAVP++ +
Sbjct: 405 SLGVPEDDND*VSTQEHLADESISVNRKSFLLSFSGFRNLSPHFSDIFKNHVAVPVKSPN 226
Query: 224 ATKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFLLFYVGFFRH 90
+ K+ VV A+D++L +IL+ HH++RE + ELL L VG H
Sbjct: 225 SAKEFPVVTAIDQHLSVILNTHHQNREWSSVELLLLSLSVGILFH 91
>gb|BT004783.1| Arabidopsis thaliana At2g47640 gene, complete cds
Length = 327
Score = 215 bits (465), Expect = 8e-055
Identities = 91/106 (85%), Positives = 94/106 (88%)
Frame = +3 / +1
Query: 87 PMAXXXXXXXXXXXFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 266
PM F+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLEN
Sbjct: 10 PMEEDTNGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLEN 189
Query: 267 VREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 404
VREMWTEVPKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 190 VREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 327
Score = 174 bits (374), Expect = 3e-042
Identities = 75/89 (84%), Positives = 79/89 (88%)
Frame = -3 / -2
Query: 403 HFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKART 224
HFGFLRT+MTESPRRNILLMN SLFTG AFFLP PVFGTSVHISLTFSRTMLQC S A T
Sbjct: 326 HFGFLRTIMTESPRRNILLMNRSLFTGSAFFLPFPVFGTSVHISLTFSRTMLQCLSNALT 147
Query: 223 RPSNFLLFRQLIRTWVLFLTLIMSTERGP 137
RP +FLLFRQLI+T VLFLTLI+ TE GP
Sbjct: 146 RPRSFLLFRQLIKT*VLFLTLIIRTESGP 60
Score = 140 bits (300), Expect = 5e-032
Identities = 56/105 (53%), Positives = 74/105 (70%)
Frame = -2 / -1
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
SF +PED++DR+ T +HLAYEP+ VHR+ LLAF R L PHL ++ KNHVAV ++ H
Sbjct: 327 SFWIPEDDNDRVST*KHLAYEPISVHRKCFLLAFPSFRNLSPHLSDIFKNHVAVSVKRPH 148
Query: 224 ATKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFLLFYVGFFRH 90
+ K+ VVPA+D NL +ILDAHH++RE G E LFL +G H
Sbjct: 147 SPKKFPVVPAID*NLSVILDAHHKNREWPGVEFLFLSLAIGILFH 13
Score = 125 bits (268), Expect = 1e-027
Identities = 56/106 (52%), Positives = 73/106 (68%)
Frame = +2 / +3
Query: 86 AHGGRNQHKKGGRGVQHRSSLGAHDERQE*YPGSYQLPEQQEVAWSRASLRSALQHGS*E 265
A+G Q + GRG+QHR++L ++DERQE*+ G QLPEQQE +W+ + LQHGS*+
Sbjct: 9 ANGRGYQWQD*GRGIQHRATLCSYDERQE*HSGFNQLPEQQETSWASEGV*QTLQHGS*K 188
Query: 266 R*GDVDRGTEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQEPEM 403
DVD G+E+ RQEE + GEQ VHKQDV W GH+ PQE +M
Sbjct: 189 CQRDVD*GSENWERQEESTSGEQRSVHKQDVSTWRLGHYRPQESKM 326
>emb|BX821379.1|CNS0AA65 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL37ZF02 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 586
Score = 215 bits (465), Expect = 8e-055
Identities = 91/106 (85%), Positives = 94/106 (88%)
Frame = +3 / +1
Query: 87 PMAXXXXXXXXXXXFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 266
PM F+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLEN
Sbjct: 109 PMEEDTNGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLEN 288
Query: 267 VREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 404
VREMWTEVPKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 289 VREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 426
Score = 178 bits (384), Expect = 1e-043
Identities = 77/96 (80%), Positives = 84/96 (87%)
Frame = -3 / -3
Query: 424 SLRVQATHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ 245
SL + ++HFGFLRT+MTESPRRNILLMN SLFTG AFFLP PVFGTSVHISLTFSRTMLQ
Sbjct: 446 SLSLSSSHFGFLRTIMTESPRRNILLMNRSLFTGSAFFLPFPVFGTSVHISLTFSRTMLQ 267
Query: 244 CRSKARTRPSNFLLFRQLIRTWVLFLTLIMSTERGP 137
C S A TRP +FLLFRQLI+T VLFLTLI+ TE GP
Sbjct: 266 CLSNALTRPRSFLLFRQLIKT*VLFLTLIIRTESGP 159
Score = 140 bits (300), Expect = 5e-032
Identities = 56/105 (53%), Positives = 74/105 (70%)
Frame = -2 / -2
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
SF +PED++DR+ T +HLAYEP+ VHR+ LLAF R L PHL ++ KNHVAV ++ H
Sbjct: 426 SFWIPEDDNDRVST*KHLAYEPISVHRKCFLLAFPSFRNLSPHLSDIFKNHVAVSVKRPH 247
Query: 224 ATKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFLLFYVGFFRH 90
+ K+ VVPA+D NL +ILDAHH++RE G E LFL +G H
Sbjct: 246 SPKKFPVVPAID*NLSVILDAHHKNREWPGVEFLFLSLAIGILFH 112
Score = 128 bits (274), Expect = 2e-028
Identities = 59/113 (52%), Positives = 76/113 (67%)
Frame = +2 / +3
Query: 86 AHGGRNQHKKGGRGVQHRSSLGAHDERQE*YPGSYQLPEQQEVAWSRASLRSALQHGS*E 265
A+G Q + GRG+QHR++L ++DERQE*+ G QLPEQQE +W+ + LQHGS*+
Sbjct: 108 ANGRGYQWQD*GRGIQHRATLCSYDERQE*HSGFNQLPEQQETSWASEGV*QTLQHGS*K 287
Query: 266 R*GDVDRGTEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQEPEMSSLYT*R 424
DVD G+E+ RQEE + GEQ VHKQDV W GH+ PQE +M T*R
Sbjct: 288 CQRDVD*GSENWERQEESTSGEQRSVHKQDVSTWRLGHYRPQESKMRGRET*R 446
>ref|NM_116149.2| Arabidopsis thaliana unknown protein AT3G62840 mRNA, complete cds
Length = 1063
Score = 215 bits (465), Expect = 8e-055
Identities = 91/106 (85%), Positives = 94/106 (88%)
Frame = +3 / +1
Query: 87 PMAXXXXXXXXXXXFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 266
PM F+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLEN
Sbjct: 130 PMEEDTNGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLEN 309
Query: 267 VREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 404
VREMWTEVPKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 310 VREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 447
Score = 168 bits (362), Expect = 1e-040
Identities = 73/89 (82%), Positives = 76/89 (85%)
Frame = -3 / -3
Query: 403 HFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKART 224
H GFLRT+MTESPRRNILLMN SL TGRAFF P PVFGTSVHISLTFSRTMLQC SKA T
Sbjct: 446 HLGFLRTIMTESPRRNILLMNRSLLTGRAFFFPFPVFGTSVHISLTFSRTMLQCLSKALT 267
Query: 223 RPSNFLLFRQLIRTWVLFLTLIMSTERGP 137
RP +FLL RQLI T VLFLTLI+ TE GP
Sbjct: 266 RPRSFLLLRQLINT*VLFLTLIIKTESGP 180
Score = 122 bits (262), Expect = 8e-027
Identities = 49/105 (46%), Positives = 73/105 (69%)
Frame = -2 / -2
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
S VPED++D + T+EHLA E + V+R+S LL+F+G R L PH ++ KNHVAVP++ +
Sbjct: 447 SLGVPEDDND*VSTQEHLADESISVNRKSFLLSFSGFRNLSPHFSDIFKNHVAVPVKSPN 268
Query: 224 ATKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFLLFYVGFFRH 90
+ K+ VV A+D++L +IL+ HH++RE + ELL L VG H
Sbjct: 267 SAKEFPVVTAIDQHLSVILNTHHQNREWSSVELLLLSLSVGILFH 133
>ref|NM_180146.3| Arabidopsis thaliana unknown protein AT2G47640 transcript variant
AT2G47640.2 mRNA, complete cds
Length = 586
Score = 215 bits (465), Expect = 8e-055
Identities = 91/106 (85%), Positives = 94/106 (88%)
Frame = +3 / +2
Query: 87 PMAXXXXXXXXXXXFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 266
PM F+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLEN
Sbjct: 101 PMEEDTNGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLEN 280
Query: 267 VREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 404
VREMWTEVPKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 281 VREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 418
Score = 178 bits (384), Expect = 1e-043
Identities = 77/96 (80%), Positives = 84/96 (87%)
Frame = -3 / -2
Query: 424 SLRVQATHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ 245
SL + ++HFGFLRT+MTESPRRNILLMN SLFTG AFFLP PVFGTSVHISLTFSRTMLQ
Sbjct: 438 SLSLSSSHFGFLRTIMTESPRRNILLMNRSLFTGSAFFLPFPVFGTSVHISLTFSRTMLQ 259
Query: 244 CRSKARTRPSNFLLFRQLIRTWVLFLTLIMSTERGP 137
C S A TRP +FLLFRQLI+T VLFLTLI+ TE GP
Sbjct: 258 CLSNALTRPRSFLLFRQLIKT*VLFLTLIIRTESGP 151
Score = 140 bits (300), Expect = 5e-032
Identities = 56/105 (53%), Positives = 74/105 (70%)
Frame = -2 / -1
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
SF +PED++DR+ T +HLAYEP+ VHR+ LLAF R L PHL ++ KNHVAV ++ H
Sbjct: 418 SFWIPEDDNDRVST*KHLAYEPISVHRKCFLLAFPSFRNLSPHLSDIFKNHVAVSVKRPH 239
Query: 224 ATKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFLLFYVGFFRH 90
+ K+ VVPA+D NL +ILDAHH++RE G E LFL +G H
Sbjct: 238 SPKKFPVVPAID*NLSVILDAHHKNREWPGVEFLFLSLAIGILFH 104
Score = 128 bits (274), Expect = 2e-028
Identities = 59/113 (52%), Positives = 76/113 (67%)
Frame = +2 / +1
Query: 86 AHGGRNQHKKGGRGVQHRSSLGAHDERQE*YPGSYQLPEQQEVAWSRASLRSALQHGS*E 265
A+G Q + GRG+QHR++L ++DERQE*+ G QLPEQQE +W+ + LQHGS*+
Sbjct: 100 ANGRGYQWQD*GRGIQHRATLCSYDERQE*HSGFNQLPEQQETSWASEGV*QTLQHGS*K 279
Query: 266 R*GDVDRGTEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQEPEMSSLYT*R 424
DVD G+E+ RQEE + GEQ VHKQDV W GH+ PQE +M T*R
Sbjct: 280 CQRDVD*GSENWERQEESTSGEQRSVHKQDVSTWRLGHYRPQESKMRGRET*R 438
>ref|NM_201981.2| Arabidopsis thaliana unknown protein AT2G47640 transcript variant
AT2G47640.3 mRNA, complete cds
Length = 594
Score = 215 bits (465), Expect = 8e-055
Identities = 91/106 (85%), Positives = 94/106 (88%)
Frame = +3 / +1
Query: 87 PMAXXXXXXXXXXXFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 266
PM F+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLEN
Sbjct: 109 PMEEDTNGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLEN 288
Query: 267 VREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 404
VREMWTEVPKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 289 VREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 426
Score = 178 bits (384), Expect = 1e-043
Identities = 77/96 (80%), Positives = 84/96 (87%)
Frame = -3 / -2
Query: 424 SLRVQATHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ 245
SL + ++HFGFLRT+MTESPRRNILLMN SLFTG AFFLP PVFGTSVHISLTFSRTMLQ
Sbjct: 446 SLSLSSSHFGFLRTIMTESPRRNILLMNRSLFTGSAFFLPFPVFGTSVHISLTFSRTMLQ 267
Query: 244 CRSKARTRPSNFLLFRQLIRTWVLFLTLIMSTERGP 137
C S A TRP +FLLFRQLI+T VLFLTLI+ TE GP
Sbjct: 266 CLSNALTRPRSFLLFRQLIKT*VLFLTLIIRTESGP 159
Score = 140 bits (300), Expect = 5e-032
Identities = 56/105 (53%), Positives = 74/105 (70%)
Frame = -2 / -1
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
SF +PED++DR+ T +HLAYEP+ VHR+ LLAF R L PHL ++ KNHVAV ++ H
Sbjct: 426 SFWIPEDDNDRVST*KHLAYEPISVHRKCFLLAFPSFRNLSPHLSDIFKNHVAVSVKRPH 247
Query: 224 ATKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFLLFYVGFFRH 90
+ K+ VVPA+D NL +ILDAHH++RE G E LFL +G H
Sbjct: 246 SPKKFPVVPAID*NLSVILDAHHKNREWPGVEFLFLSLAIGILFH 112
Score = 128 bits (274), Expect = 2e-028
Identities = 59/113 (52%), Positives = 76/113 (67%)
Frame = +2 / +3
Query: 86 AHGGRNQHKKGGRGVQHRSSLGAHDERQE*YPGSYQLPEQQEVAWSRASLRSALQHGS*E 265
A+G Q + GRG+QHR++L ++DERQE*+ G QLPEQQE +W+ + LQHGS*+
Sbjct: 108 ANGRGYQWQD*GRGIQHRATLCSYDERQE*HSGFNQLPEQQETSWASEGV*QTLQHGS*K 287
Query: 266 R*GDVDRGTEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQEPEMSSLYT*R 424
DVD G+E+ RQEE + GEQ VHKQDV W GH+ PQE +M T*R
Sbjct: 288 CQRDVD*GSENWERQEESTSGEQRSVHKQDVSTWRLGHYRPQESKMRGRET*R 446
>gb|AI998209.1|AI998209 701515770 A. thaliana, Columbia Col-0, rosette-2 Arabidopsis
thaliana cDNA clone 701515770, mRNA sequence
Length = 515
Score = 215 bits (463), Expect = 2e-054
Identities = 89/92 (96%), Positives = 92/92 (100%)
Frame = +3 / -1
Query: 129 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 308
F+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 401 FNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 222
Query: 309 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 404
KKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 221 KKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 126
Score = 178 bits (384), Expect = 1e-043
Identities = 77/96 (80%), Positives = 84/96 (87%)
Frame = -3 / +1
Query: 424 SLRVQATHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ 245
SL + ++HFGFLRT+MTESPRRNILLMN SLFTG AFFLP PVFGTSVHISLTFSRTMLQ
Sbjct: 106 SLSLSSSHFGFLRTIMTESPRRNILLMNRSLFTGSAFFLPFPVFGTSVHISLTFSRTMLQ 285
Query: 244 CRSKARTRPSNFLLFRQLIRTWVLFLTLIMSTERGP 137
C S A TRP +FLLFRQLI+T VLFLTLI+ TE GP
Sbjct: 286 CLSNALTRPRSFLLFRQLIKT*VLFLTLIIRTESGP 393
Score = 135 bits (290), Expect = 1e-030
Identities = 54/96 (56%), Positives = 71/96 (73%)
Frame = -2 / +3
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
SF +PED++DR+ T +HLAYEP+ VHR+ LLAF R L PHL ++ KNHVAV ++ H
Sbjct: 126 SFWIPEDDNDRVST*KHLAYEPISVHRKCFLLAFPSFRNLSPHLSDIFKNHVAVSVKRPH 305
Query: 224 ATKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFL 117
+ K+ VVPA+D NL +ILDAHH++RE G E LFL
Sbjct: 306 SPKKFPVVPAID*NLSVILDAHHKNREWPGVEFLFL 413
Score = 126 bits (270), Expect = 6e-028
Identities = 56/102 (54%), Positives = 71/102 (69%)
Frame = +2 / -3
Query: 119 GRGVQHRSSLGAHDERQE*YPGSYQLPEQQEVAWSRASLRSALQHGS*ER*GDVDRGTED 298
GRG+QHR++L ++DERQE*+ G QLPEQQE +W+ + LQHGS*+ DVD G+E+
Sbjct: 411 GRGIQHRATLCSYDERQE*HSGFNQLPEQQETSWASEGV*QTLQHGS*KCQRDVD*GSEN 232
Query: 299 R*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQEPEMSSLYT*R 424
RQEE + GEQ VHKQDV W GH+ PQE +M T*R
Sbjct: 231 WERQEESTSGEQRSVHKQDVSTWRLGHYRPQESKMRGRET*R 106
>gb|AV533116.1|AV533116 AV533116 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB056b01F 3', mRNA sequence
Length = 591
Score = 215 bits (463), Expect = 2e-054
Identities = 89/92 (96%), Positives = 92/92 (100%)
Frame = +3 / -2
Query: 129 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 308
F+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 470 FNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 291
Query: 309 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 404
KKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 290 KKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 195
Score = 168 bits (362), Expect = 1e-040
Identities = 73/89 (82%), Positives = 76/89 (85%)
Frame = -3 / +1
Query: 403 HFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKART 224
H GFLRT+MTESPRRNILLMN SL TGRAFF P PVFGTSVHISLTFSRTMLQC SKA T
Sbjct: 196 HLGFLRTIMTESPRRNILLMNRSLLTGRAFFFPFPVFGTSVHISLTFSRTMLQCLSKALT 375
Query: 223 RPSNFLLFRQLIRTWVLFLTLIMSTERGP 137
RP +FLL RQLI T VLFLTLI+ TE GP
Sbjct: 376 RPRSFLLLRQLINT*VLFLTLIIKTESGP 462
Score = 117 bits (251), Expect = 3e-025
Identities = 46/96 (47%), Positives = 70/96 (72%)
Frame = -2 / +3
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
S VPED++D + T+EHLA E + V+R+S LL+F+G R L PH ++ KNHVAVP++ +
Sbjct: 195 SLGVPEDDND*VSTQEHLADESISVNRKSFLLSFSGFRNLSPHFSDIFKNHVAVPVKSPN 374
Query: 224 ATKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFL 117
+ K+ VV A+D++L +IL+ HH++RE + ELL L
Sbjct: 375 SAKEFPVVTAIDQHLSVILNTHHQNREWSSVELLLL 482
>gb|AY086601.1| Arabidopsis thaliana clone 26123 mRNA, complete sequence
Length = 619
Score = 215 bits (463), Expect = 2e-054
Identities = 89/92 (96%), Positives = 92/92 (100%)
Frame = +3 / +2
Query: 129 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 308
F+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 176 FNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 355
Query: 309 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 404
KKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 356 KKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 451
Score = 178 bits (384), Expect = 1e-043
Identities = 77/96 (80%), Positives = 84/96 (87%)
Frame = -3 / -2
Query: 424 SLRVQATHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ 245
SL + ++HFGFLRT+MTESPRRNILLMN SLFTG AFFLP PVFGTSVHISLTFSRTMLQ
Sbjct: 471 SLSLSSSHFGFLRTIMTESPRRNILLMNRSLFTGSAFFLPFPVFGTSVHISLTFSRTMLQ 292
Query: 244 CRSKARTRPSNFLLFRQLIRTWVLFLTLIMSTERGP 137
C S A TRP +FLLFRQLI+T VLFLTLI+ TE GP
Sbjct: 291 CLSNALTRPRSFLLFRQLIKT*VLFLTLIIRTESGP 184
Score = 135 bits (290), Expect = 1e-030
Identities = 54/96 (56%), Positives = 71/96 (73%)
Frame = -2 / -1
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
SF +PED++DR+ T +HLAYEP+ VHR+ LLAF R L PHL ++ KNHVAV ++ H
Sbjct: 451 SFWIPEDDNDRVST*KHLAYEPISVHRKCFLLAFPSFRNLSPHLSDIFKNHVAVSVKRPH 272
Query: 224 ATKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFL 117
+ K+ VVPA+D NL +ILDAHH++RE G E LFL
Sbjct: 271 SPKKFPVVPAID*NLSVILDAHHKNREWPGVEFLFL 164
Score = 126 bits (270), Expect = 6e-028
Identities = 56/102 (54%), Positives = 71/102 (69%)
Frame = +2 / +1
Query: 119 GRGVQHRSSLGAHDERQE*YPGSYQLPEQQEVAWSRASLRSALQHGS*ER*GDVDRGTED 298
GRG+QHR++L ++DERQE*+ G QLPEQQE +W+ + LQHGS*+ DVD G+E+
Sbjct: 166 GRGIQHRATLCSYDERQE*HSGFNQLPEQQETSWASEGV*QTLQHGS*KCQRDVD*GSEN 345
Query: 299 R*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQEPEMSSLYT*R 424
RQEE + GEQ VHKQDV W GH+ PQE +M T*R
Sbjct: 346 WERQEESTSGEQRSVHKQDVSTWRLGHYRPQESKMRGRET*R 471
>gb|AY087177.1| Arabidopsis thaliana clone 32457 mRNA, complete sequence
Length = 646
Score = 215 bits (463), Expect = 2e-054
Identities = 89/92 (96%), Positives = 92/92 (100%)
Frame = +3 / +1
Query: 129 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 308
F+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 175 FNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 354
Query: 309 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 404
KKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 355 KKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 450
Score = 169 bits (363), Expect = 1e-040
Identities = 73/90 (81%), Positives = 77/90 (85%)
Frame = -3 / -3
Query: 406 THFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKAR 227
+H GFLRT+MTESPRRNILLMN SL TGRAFF P PVFGTSVHISLTFSRTMLQC SKA
Sbjct: 452 SHLGFLRTIMTESPRRNILLMNRSLLTGRAFFFPFPVFGTSVHISLTFSRTMLQCLSKAL 273
Query: 226 TRPSNFLLFRQLIRTWVLFLTLIMSTERGP 137
TRP +FLL RQLI T VLFLTLI+ TE GP
Sbjct: 272 TRPRSFLLLRQLINT*VLFLTLIIKTESGP 183
Score = 117 bits (251), Expect = 3e-025
Identities = 46/96 (47%), Positives = 70/96 (72%)
Frame = -2 / -2
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
S VPED++D + T+EHLA E + V+R+S LL+F+G R L PH ++ KNHVAVP++ +
Sbjct: 450 SLGVPEDDND*VSTQEHLADESISVNRKSFLLSFSGFRNLSPHFSDIFKNHVAVPVKSPN 271
Query: 224 ATKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFL 117
+ K+ VV A+D++L +IL+ HH++RE + ELL L
Sbjct: 270 SAKEFPVVTAIDQHLSVILNTHHQNREWSSVELLLL 163
>ref|NM_130332.2| Arabidopsis thaliana unknown protein AT2G47640 transcript variant
AT2G47640.1 mRNA, complete cds
Length = 624
Score = 215 bits (463), Expect = 2e-054
Identities = 89/92 (96%), Positives = 92/92 (100%)
Frame = +3 / +1
Query: 129 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 308
F+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 181 FNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 360
Query: 309 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 404
KKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 361 KKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 456
Score = 178 bits (384), Expect = 1e-043
Identities = 77/96 (80%), Positives = 84/96 (87%)
Frame = -3 / -2
Query: 424 SLRVQATHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ 245
SL + ++HFGFLRT+MTESPRRNILLMN SLFTG AFFLP PVFGTSVHISLTFSRTMLQ
Sbjct: 476 SLSLSSSHFGFLRTIMTESPRRNILLMNRSLFTGSAFFLPFPVFGTSVHISLTFSRTMLQ 297
Query: 244 CRSKARTRPSNFLLFRQLIRTWVLFLTLIMSTERGP 137
C S A TRP +FLLFRQLI+T VLFLTLI+ TE GP
Sbjct: 296 CLSNALTRPRSFLLFRQLIKT*VLFLTLIIRTESGP 189
Score = 135 bits (290), Expect = 1e-030
Identities = 54/96 (56%), Positives = 71/96 (73%)
Frame = -2 / -1
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
SF +PED++DR+ T +HLAYEP+ VHR+ LLAF R L PHL ++ KNHVAV ++ H
Sbjct: 456 SFWIPEDDNDRVST*KHLAYEPISVHRKCFLLAFPSFRNLSPHLSDIFKNHVAVSVKRPH 277
Query: 224 ATKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFL 117
+ K+ VVPA+D NL +ILDAHH++RE G E LFL
Sbjct: 276 SPKKFPVVPAID*NLSVILDAHHKNREWPGVEFLFL 169
Score = 126 bits (270), Expect = 6e-028
Identities = 56/102 (54%), Positives = 71/102 (69%)
Frame = +2 / +3
Query: 119 GRGVQHRSSLGAHDERQE*YPGSYQLPEQQEVAWSRASLRSALQHGS*ER*GDVDRGTED 298
GRG+QHR++L ++DERQE*+ G QLPEQQE +W+ + LQHGS*+ DVD G+E+
Sbjct: 171 GRGIQHRATLCSYDERQE*HSGFNQLPEQQETSWASEGV*QTLQHGS*KCQRDVD*GSEN 350
Query: 299 R*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQEPEMSSLYT*R 424
RQEE + GEQ VHKQDV W GH+ PQE +M T*R
Sbjct: 351 WERQEESTSGEQRSVHKQDVSTWRLGHYRPQESKMRGRET*R 476
>gb|CB264605.1|CB264605 49-E014658-035-002-A13-T7R MPIZ-ADIS-035 Arabidopsis thaliana cDNA
clone MPIZp2000A132Q 5-PRIME, mRNA sequence
Length = 560
Score = 212 bits (457), Expect = 1e-053
Identities = 90/106 (84%), Positives = 93/106 (87%)
Frame = +3 / +3
Query: 87 PMAXXXXXXXXXXXFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 266
PM F+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLEN
Sbjct: 96 PMEEDTNGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLEN 275
Query: 267 VREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 404
V EMWTEVPKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 276 VIEMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 413
Score = 168 bits (361), Expect = 2e-040
Identities = 72/90 (80%), Positives = 77/90 (85%)
Frame = -3 / -2
Query: 406 THFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKAR 227
+H GFLRT+MTESPRRNILLMN SL TGRAFF P PVFGTSVHIS+TFSRTMLQC SKA
Sbjct: 415 SHLGFLRTIMTESPRRNILLMNRSLLTGRAFFFPFPVFGTSVHISMTFSRTMLQCLSKAL 236
Query: 226 TRPSNFLLFRQLIRTWVLFLTLIMSTERGP 137
TRP +FLL RQLI T VLFLTLI+ TE GP
Sbjct: 235 TRPRSFLLLRQLINT*VLFLTLIIKTESGP 146
Score = 122 bits (260), Expect = 2e-026
Identities = 49/105 (46%), Positives = 73/105 (69%)
Frame = -2 / -1
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
S VPED++D + T+EHLA E + V+R+S LL+F+G R L PH ++ KNHVAVP++ +
Sbjct: 413 SLGVPEDDND*VSTQEHLADESISVNRKSFLLSFSGFRNLSPHFYDIFKNHVAVPVKSPN 234
Query: 224 ATKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFLLFYVGFFRH 90
+ K+ VV A+D++L +IL+ HH++RE + ELL L VG H
Sbjct: 233 SAKEFPVVTAIDQHLSVILNTHHQNREWSSVELLLLSLSVGILFH 99
>gb|AU226468.1|AU226468 AU226468 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-35-O15 3',
mRNA sequence
Length = 425
Score = 205 bits (442), Expect = 1e-051
Identities = 85/88 (96%), Positives = 88/88 (100%)
Frame = +3 / -2
Query: 141 PLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKA 320
PLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKA
Sbjct: 424 PLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKA 245
Query: 321 LPVNKDRFISKMFLRGDSVIIVLRNPK* 404
LP+N+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 244 LPLNRDRFISKMFLRGDSVIIVLRNPK* 161
Score = 170 bits (366), Expect = 4e-041
Identities = 74/95 (77%), Positives = 81/95 (85%)
Frame = -3 / +3
Query: 424 SLRVQATHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ 245
SL + ++HFGFLRT+MTESPRRNILLMN SLF G AFFLP PV GTSVHISLTFSRTMLQ
Sbjct: 141 SLSLSSSHFGFLRTIMTESPRRNILLMNRSLFNGSAFFLPFPVLGTSVHISLTFSRTMLQ 320
Query: 244 CRSKARTRPSNFLLFRQLIRTWVLFLTLIMSTERG 140
C S A TRP +FLLFRQLI+T VLFLTLI+ TE G
Sbjct: 321 CLSNALTRPRSFLLFRQLIKT*VLFLTLIIRTESG 425
Score = 119 bits (254), Expect = 1e-025
Identities = 47/87 (54%), Positives = 64/87 (73%)
Frame = -2 / +2
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
SF +PED++DR+ T +HLAYEP+ V R+ LLAF L PHL ++ KNHVAV ++ H
Sbjct: 161 SFWIPEDDNDRVST*KHLAYEPISVQRKCFLLAFPSFGNLSPHLSDIFKNHVAVSVKRPH 340
Query: 224 ATKQLLVVPAVDKNLGIILDAHHEHRE 144
+ K+ VVPA+D NL +ILDAHH++RE
Sbjct: 341 SPKKFPVVPAID*NLSVILDAHHKNRE 421
Score = 103 bits (220), Expect = 5e-021
Identities = 48/95 (50%), Positives = 63/95 (66%)
Frame = +2 / -1
Query: 140 SSLGAHDERQE*YPGSYQLPEQQEVAWSRASLRSALQHGS*ER*GDVDRGTEDR*RQEEG 319
++L ++DERQE*+ G QLPEQQE +W+ + LQHGS*+ DVD G+++ RQEE
Sbjct: 425 ATLCSYDERQE*HSGFNQLPEQQETSWASEGV*QTLQHGS*KCQRDVD*GSQNWERQEES 246
Query: 320 SPGEQGQVHKQDVPPWGFGHHCPQEPEMSSLYT*R 424
+ EQ VHKQDV W GH+ PQE +M T*R
Sbjct: 245 TSVEQRSVHKQDVSTWRLGHYRPQESKMRGRET*R 141
>gb|BP571612.1|BP571612 BP571612 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-76-O18 3',
mRNA sequence
Length = 451
Score = 203 bits (438), Expect = 4e-051
Identities = 84/88 (95%), Positives = 88/88 (100%)
Frame = +3 / -2
Query: 141 PLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKA 320
PLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENVRE+WTEVPKTGKGKKKA
Sbjct: 429 PLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVREIWTEVPKTGKGKKKA 250
Query: 321 LPVNKDRFISKMFLRGDSVIIVLRNPK* 404
LPVN+DRFI+KMFLRGDSVIIVLRNPK*
Sbjct: 249 LPVNRDRFITKMFLRGDSVIIVLRNPK* 166
Score = 170 bits (366), Expect = 4e-041
Identities = 74/95 (77%), Positives = 82/95 (86%)
Frame = -3 / +2
Query: 424 SLRVQATHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ 245
SL + ++HFGFLRT+MTESPRRNIL+MN SLFTG AFFLP PVFGTSV ISLTFSRTMLQ
Sbjct: 146 SLSLSSSHFGFLRTIMTESPRRNILVMNRSLFTGSAFFLPFPVFGTSVQISLTFSRTMLQ 325
Query: 244 CRSKARTRPSNFLLFRQLIRTWVLFLTLIMSTERG 140
C S A TRP +FLLFRQLI+T VLFLTLI+ TE G
Sbjct: 326 CLSNALTRPRSFLLFRQLIKT*VLFLTLIIRTESG 430
Score = 121 bits (258), Expect = 3e-026
Identities = 47/87 (54%), Positives = 65/87 (74%)
Frame = -2 / +1
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
SF +PED++DR+ T +HL YEP+ VHR+ LLAF R L P+L ++ KNHVAV ++ H
Sbjct: 166 SFWIPEDDNDRVST*KHLGYEPISVHRKCFLLAFPSFRNLSPNLSDIFKNHVAVSVKRPH 345
Query: 224 ATKQLLVVPAVDKNLGIILDAHHEHRE 144
+ K+ VVPA+D NL +ILDAHH++RE
Sbjct: 346 SPKKFPVVPAID*NLSVILDAHHKNRE 426
Score = 105 bits (224), Expect = 1e-021
Identities = 48/95 (50%), Positives = 63/95 (66%)
Frame = +2 / -1
Query: 140 SSLGAHDERQE*YPGSYQLPEQQEVAWSRASLRSALQHGS*ER*GDVDRGTEDR*RQEEG 319
++L ++DERQE*+ G QLPEQQE +W+ + LQHGS*+ D+D G+E+ RQEE
Sbjct: 430 ATLCSYDERQE*HSGFNQLPEQQETSWASEGV*QTLQHGS*KCQRDLD*GSENWERQEES 251
Query: 320 SPGEQGQVHKQDVPPWGFGHHCPQEPEMSSLYT*R 424
+ GEQ VH QDV W GH+ PQE +M T*R
Sbjct: 250 TSGEQRSVHNQDVSTWRLGHYRPQESKMRGRET*R 146
>emb|AL162651.1|ATF26K9 Arabidopsis thaliana DNA chromosome 3, BAC clone F26K9
Length = 110257
Score = 129 bits (277), Expect(2) = 7e-050
Identities = 52/54 (96%), Positives = 54/54 (100%)
Frame = +3 / -2
Query: 129 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV 290
F+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENVREMWTEV
Sbjct: 89064 FNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVREMWTEV 88903
Score = 91.8 bits (194), Expect(2) = 3e-036
Identities = 41/51 (80%), Positives = 43/51 (84%)
Frame = -3 / +2
Query: 289 TSVHISLTFSRTMLQCRSKARTRPSNFLLFRQLIRTWVLFLTLIMSTERGP 137
TSVHISLTFSRTMLQC SKA TRP +FLL RQLI T VLFLTLI+ TE GP
Sbjct: 88904 TSVHISLTFSRTMLQCLSKALTRPRSFLLLRQLINT*VLFLTLIIKTESGP 89056
Score = 90.0 bits (190), Expect(2) = 7e-050
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = +3 / -3
Query: 288 VPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 404
VPKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 88817 VPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 88701
Score = 82.2 bits (173), Expect(2) = 3e-036
Identities = 33/39 (84%), Positives = 34/39 (87%)
Frame = -3 / +1
Query: 403 HFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGT 287
H GFLRT+MTESPRRNILLMN SL TGRAFF P PVFGT
Sbjct: 88702 HLGFLRTIMTESPRRNILLMNRSLLTGRAFFFPFPVFGT 88818
>gb|BP613407.1|BP613407 BP613407 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-93-A15 3',
mRNA sequence
Length = 514
Score = 173 bits (373), Expect(2) = 2e-049
Identities = 71/73 (97%), Positives = 73/73 (100%)
Frame = +3 / -3
Query: 186 LINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLR 365
LINCRNN+KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVN+DRFISKMFLR
Sbjct: 410 LINCRNNRKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLR 231
Query: 366 GDSVIIVLRNPK* 404
GDSVIIVLRNPK*
Sbjct: 230 GDSVIIVLRNPK* 192
Score = 143 bits (307), Expect(2) = 2e-035
Identities = 61/72 (84%), Positives = 63/72 (87%)
Frame = -3 / +1
Query: 403 HFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKART 224
H GFLRT+MTESPRRNILLMN SL TGRAFF P PVFGTSVHISLTFSRTMLQC SKA T
Sbjct: 193 HLGFLRTIMTESPRRNILLMNRSLLTGRAFFFPFPVFGTSVHISLTFSRTMLQCLSKALT 372
Query: 223 RPSNFLLFRQLI 188
RP +FLL RQLI
Sbjct: 373 RPRSFLLLRQLI 408
Score = 44.6 bits (91), Expect(2) = 2e-049
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +3 / -2
Query: 129 FSTGPLSVLMMSVKNNTQVL 188
F+TGPLSVLMMSVKNNTQV+
Sbjct: 468 FNTGPLSVLMMSVKNNTQVV 409
Score = 28.1 bits (55), Expect(2) = 2e-035
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -3 / +2
Query: 184 TWVLFLTLIMSTERGP 137
T VLFLTLI+ TE GP
Sbjct: 413 T*VLFLTLIIKTESGP 460
>gb|AV819279.1|AV819279 AV819279 RAFL11 Arabidopsis thaliana cDNA clone RAFL11-03-H06 3',
mRNA sequence
Length = 435
Score = 191 bits (412), Expect = 2e-047
Identities = 79/81 (97%), Positives = 81/81 (100%)
Frame = +3 / -2
Query: 162 SVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDR 341
SVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVN+DR
Sbjct: 434 SVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNRDR 255
Query: 342 FISKMFLRGDSVIIVLRNPK* 404
FISKMFLRGDSVIIVLRNPK*
Sbjct: 254 FISKMFLRGDSVIIVLRNPK* 192
Score = 156 bits (335), Expect = 7e-037
Identities = 68/81 (83%), Positives = 70/81 (86%)
Frame = -3 / +1
Query: 403 HFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKART 224
H GFLRT+MTESPRRNILLMN SL TGRAFF P PVFGTSVHISLTFSRTMLQC SKA T
Sbjct: 193 HLGFLRTIMTESPRRNILLMNRSLLTGRAFFFPFPVFGTSVHISLTFSRTMLQCLSKALT 372
Query: 223 RPSNFLLFRQLIRTWVLFLTL 161
RP +FLL RQLI T VLFLTL
Sbjct: 373 RPRSFLLLRQLINT*VLFLTL 435
>gb|BP864880.1|BP864880 BP864880 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-72-C14 5',
mRNA sequence
Length = 390
Score = 191 bits (411), Expect = 2e-047
Identities = 77/81 (95%), Positives = 81/81 (100%)
Frame = +3 / +3
Query: 129 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 308
F+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 147 FNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 326
Query: 309 KKKALPVNKDRFISKMFLRGD 371
K+KALPVN+DRFISKMFLRGD
Sbjct: 327 KEKALPVNRDRFISKMFLRGD 389
Score = 142 bits (304), Expect = 1e-032
Identities = 63/78 (80%), Positives = 65/78 (83%)
Frame = -3 / -3
Query: 370 SPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKARTRPSNFLLFRQL 191
SPRRNILLMN SL TGRAF P PVFGTSVHISLTFSRTMLQC SKA TRP +FLL RQL
Sbjct: 388 SPRRNILLMNRSLLTGRAFSFPFPVFGTSVHISLTFSRTMLQCLSKALTRPRSFLLLRQL 209
Query: 190 IRTWVLFLTLIMSTERGP 137
I T VLFLTLI+ TE GP
Sbjct: 208 INT*VLFLTLIIKTESGP 155
Score = 105 bits (223), Expect = 2e-021
Identities = 40/85 (47%), Positives = 62/85 (72%)
Frame = -2 / -2
Query: 371 IPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSHATKQLLVVPAV 192
+ T+EHLA E + V+R+S LL+F+G R L PH ++ KNHVAVP++ ++ K+ VV A+
Sbjct: 389 VSTQEHLADESISVNRKSFLLSFSGFRNLSPHFSDIFKNHVAVPVKSPNSAKEFPVVTAI 210
Query: 191 DKNLGIILDAHHEHRERTGAELLFL 117
D++L +IL+ HH++RE + ELL L
Sbjct: 209 DQHLSVILNTHHQNREWSSVELLLL 135
>gb|BP866835.1|BP866835 BP866835 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-79-B01 5',
mRNA sequence
Length = 381
Score = 188 bits (405), Expect = 2e-046
Identities = 78/93 (83%), Positives = 81/93 (87%)
Frame = +3 / +2
Query: 87 PMAXXXXXXXXXXXFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 266
PM F+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLEN
Sbjct: 101 PMEEDTNGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLEN 280
Query: 267 VREMWTEVPKTGKGKKKALPVNKDRFISKMFLR 365
VREMWTEVPKTGKGKKKALPVN+DRFISKMFLR
Sbjct: 281 VREMWTEVPKTGKGKKKALPVNRDRFISKMFLR 379
Score = 144 bits (308), Expect = 4e-033
Identities = 63/77 (81%), Positives = 65/77 (84%)
Frame = -3 / -1
Query: 367 PRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKARTRPSNFLLFRQLI 188
PRRNILLMN SL TGRAFF P PVFGTSVHISLTFSRTMLQC SKA TRP +FLL RQLI
Sbjct: 381 PRRNILLMNRSLLTGRAFFFPFPVFGTSVHISLTFSRTMLQCLSKALTRPRSFLLLRQLI 202
Query: 187 RTWVLFLTLIMSTERGP 137
T VLFLTLI+ TE GP
Sbjct: 201 NT*VLFLTLIIKTESGP 151
Score = 109 bits (232), Expect = 1e-022
Identities = 43/92 (46%), Positives = 64/92 (69%)
Frame = -2 / -3
Query: 365 TEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSHATKQLLVVPAVDK 186
T+EHLA E + V+R+S LL+F+G R L PH ++ KNHVAVP++ ++ K+ VV A+D+
Sbjct: 379 TQEHLADESISVNRKSFLLSFSGFRNLSPHFSDIFKNHVAVPVKSPNSAKEFPVVTAIDQ 200
Query: 185 NLGIILDAHHEHRERTGAELLFLLFYVGFFRH 90
+L +IL+ HH++RE + ELL L VG H
Sbjct: 199 HLSVILNTHHQNREWSSVELLLLSLSVGILFH 104
>gb|BP581041.1|BP581041 BP581041 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-30-D07 3',
mRNA sequence
Length = 467
Score = 116 bits (249), Expect(3) = 9e-043
Identities = 46/52 (88%), Positives = 49/52 (94%)
Frame = +3 / -3
Query: 216 LGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGD 371
L + AFDRHCNMVLENVREMWTEVPKTGKGKKKALPVN+DRFISKMFLRG+
Sbjct: 384 LAELGAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGE 229
Score = 100 bits (212), Expect(3) = 5e-030
Identities = 43/54 (79%), Positives = 43/54 (79%)
Frame = -3 / +2
Query: 370 SPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKARTRPSNF 209
SPRRNILLMN SL TGRAFF P PVFGTSVHISLTFSRTMLQC SKA F
Sbjct: 230 SPRRNILLMNRSLLTGRAFFFPFPVFGTSVHISLTFSRTMLQCLSKAPNSAKEF 391
Score = 72.5 bits (152), Expect(3) = 9e-043
Identities = 29/32 (90%), Positives = 31/32 (96%)
Frame = +3 / -2
Query: 141 PLSVLMMSVKNNTQVLINCRNNKKLLGRVRAF 236
PLS+LMMSVKNNTQVLINCRNN+KLLGRVR F
Sbjct: 460 PLSILMMSVKNNTQVLINCRNNRKLLGRVRGF 365
Score = 45.5 bits (93), Expect(3) = 5e-030
Identities = 21/32 (65%), Positives = 23/32 (71%)
Frame = -3 / +3
Query: 235 KARTRPSNFLLFRQLIRTWVLFLTLIMSTERG 140
K TRP +FLL RQLI T VLFLTLI+ E G
Sbjct: 366 KPLTRPRSFLLLRQLINT*VLFLTLIIKIESG 461
Score = 25.8 bits (50), Expect(3) = 5e-030
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -3 / +1
Query: 403 HFGFLRTMMTE 371
H GFLRT+MTE
Sbjct: 196 HLGFLRTIMTE 228
Score = 24.9 bits (48), Expect(3) = 9e-043
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3 / -1
Query: 372 SVIIVLRNPK* 404
SVIIVLRNPK*
Sbjct: 227 SVIIVLRNPK* 195
>gb|BP821598.1|BP821598 BP821598 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-58-J16 5',
mRNA sequence
Length = 398
Score = 175 bits (376), Expect = 2e-042
Identities = 72/85 (84%), Positives = 78/85 (91%)
Frame = +3 / +1
Query: 129 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 308
F+TGPLSVLMMSVKNNTQVLINCR N+KLLGRVRAFDRHCNMVLENVREMWTEV K GK
Sbjct: 142 FNTGPLSVLMMSVKNNTQVLINCRKNRKLLGRVRAFDRHCNMVLENVREMWTEVRKLGKA 321
Query: 309 KKKALPVNKDRFISKMFLRGDSVII 383
++K +N+DRFISKMFLRGDSVII
Sbjct: 322 RRKHFRLNRDRFISKMFLRGDSVII 396
Score = 135 bits (289), Expect = 2e-030
Identities = 60/82 (73%), Positives = 66/82 (80%)
Frame = -3 / -1
Query: 382 MMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKARTRPSNFLL 203
+MTESPRRNILLMN SLF+ + F L P F TSVHISLTFSRTMLQC S A TRP +FL
Sbjct: 395 IMTESPRRNILLMNRSLFSRKCFLLAFPSFRTSVHISLTFSRTMLQCLSNALTRPRSFLF 216
Query: 202 FRQLIRTWVLFLTLIMSTERGP 137
FRQLI+T VLFLTLI+ TE GP
Sbjct: 215 FRQLIKT*VLFLTLIIRTESGP 150
Score = 104 bits (221), Expect = 4e-021
Identities = 43/89 (48%), Positives = 59/89 (66%)
Frame = -2 / -3
Query: 383 NDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSHATKQLLV 204
++DR+ T +HLAYEP+ V E L + L PHL ++ KNHVAV ++ H+ K+ V
Sbjct: 396 DNDRVST*KHLAYEPISVQPEVLSSCLSQFSNLSPHLSDIFKNHVAVSVKRPHSPKKFPV 217
Query: 203 VPAVDKNLGIILDAHHEHRERTGAELLFL 117
PA+D NL +ILDAHH++RE G E LFL
Sbjct: 216 FPAID*NLSVILDAHHKNREWPGVEFLFL 130
>gb|BP815339.1|BP815339 BP815339 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-38-I16 5',
mRNA sequence
Length = 391
Score = 155 bits (334), Expect(2) = 3e-042
Identities = 63/65 (96%), Positives = 65/65 (100%)
Frame = +3 / +3
Query: 129 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 308
F+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 144 FNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 323
Query: 309 KKKAL 323
KKKAL
Sbjct: 324 KKKAL 338
Score = 115 bits (245), Expect(2) = 2e-028
Identities = 50/62 (80%), Positives = 52/62 (83%)
Frame = -3 / -1
Query: 322 RAFFLPLPVFGTSVHISLTFSRTMLQCRSKARTRPSNFLLFRQLIRTWVLFLTLIMSTER 143
RAFF P PVFGTSVHISLTFSRTMLQC SKA TRP +FLL RQLI T VLFLTLI+ TE
Sbjct: 337 RAFFFPFPVFGTSVHISLTFSRTMLQCLSKALTRPRSFLLLRQLINT*VLFLTLIIKTES 158
Query: 142 GP 137
GP
Sbjct: 157 GP 152
Score = 38.6 bits (78), Expect(2) = 3e-042
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +3 / +2
Query: 303 KGKKKALPVNKDRFISKMFLRGDSV 377
K K+++ VN+D FI KMFLRGDSV
Sbjct: 317 KRKEESSSVNRDGFIRKMFLRGDSV 391
Score = 33.1 bits (66), Expect(2) = 2e-028
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -3 / -2
Query: 376 TESPRRNILLMNLSLFT 326
TESPRRNI LMN SL T
Sbjct: 390 TESPRRNIFLMNPSLLT 340
>gb|AC002535.3| Arabidopsis thaliana chromosome 2 clone T30B22 map CIC06C03, complete
sequence
Length = 98937
Score = 92.7 bits (196), Expect(3) = 2e-041
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +3 / -1
Query: 180 QVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV 290
QVLINCRNN+KLLGRVRAFDRHCNMVLENVREMWTEV
Sbjct: 10515 QVLINCRNNRKLLGRVRAFDRHCNMVLENVREMWTEV 10405
Score = 91.3 bits (193), Expect(3) = 2e-033
Identities = 37/46 (80%), Positives = 41/46 (89%)
Frame = -3 / +1
Query: 424 SLRVQATHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGT 287
SL + ++HFGFLRT+MTESPRRNILLMN SLFTG AFFLP PVFGT
Sbjct: 10189 SLSLSSSHFGFLRTIMTESPRRNILLMNRSLFTGSAFFLPFPVFGT 10326
Score = 90.0 bits (190), Expect(3) = 2e-041
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = +3 / -2
Query: 288 VPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 404
VPKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 10325 VPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 10209
Score = 71.6 bits (150), Expect(3) = 2e-033
Identities = 30/39 (76%), Positives = 33/39 (84%)
Frame = -3 / +2
Query: 298 VFGTSVHISLTFSRTMLQCRSKARTRPSNFLLFRQLIRT 182
+ TSVHISLTFSRTMLQC S A TRP +FLLFRQLI+T
Sbjct: 10397 ILATSVHISLTFSRTMLQCLSNALTRPRSFLLFRQLIKT 10513
Score = 44.1 bits (90), Expect(3) = 2e-041
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +3 / -3
Query: 129 FSTGPLSVLMMSVKNNTQV 185
F+TGPLSVLMMSVKNNTQV
Sbjct: 10756 FNTGPLSVLMMSVKNNTQV 10700
Score = 36.8 bits (74), Expect(3) = 2e-033
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2 / +2
Query: 182 LGIILDAHHEHRERTGAELLFL 117
L +ILDAHH++RE G E LFL
Sbjct: 10703 LSVILDAHHKNREWPGVEFLFL 10768
>gb|AC005309.3| Arabidopsis thaliana chromosome 2 clone F17A22 map CIC06C03, complete
sequence
Length = 106355
Score = 92.7 bits (196), Expect(3) = 2e-041
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +3 / +2
Query: 180 QVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV 290
QVLINCRNN+KLLGRVRAFDRHCNMVLENVREMWTEV
Sbjct: 5561 QVLINCRNNRKLLGRVRAFDRHCNMVLENVREMWTEV 5671
Score = 91.3 bits (193), Expect(3) = 2e-033
Identities = 37/46 (80%), Positives = 41/46 (89%)
Frame = -3 / -2
Query: 424 SLRVQATHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGT 287
SL + ++HFGFLRT+MTESPRRNILLMN SLFTG AFFLP PVFGT
Sbjct: 5887 SLSLSSSHFGFLRTIMTESPRRNILLMNRSLFTGSAFFLPFPVFGT 5750
Score = 90.0 bits (190), Expect(3) = 2e-041
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = +3 / +3
Query: 288 VPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 404
VPKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 5751 VPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 5867
Score = 71.6 bits (150), Expect(3) = 2e-033
Identities = 30/39 (76%), Positives = 33/39 (84%)
Frame = -3 / -3
Query: 298 VFGTSVHISLTFSRTMLQCRSKARTRPSNFLLFRQLIRT 182
+ TSVHISLTFSRTMLQC S A TRP +FLLFRQLI+T
Sbjct: 5679 ILATSVHISLTFSRTMLQCLSNALTRPRSFLLFRQLIKT 5563
Score = 44.1 bits (90), Expect(3) = 2e-041
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +3 / +1
Query: 129 FSTGPLSVLMMSVKNNTQV 185
F+TGPLSVLMMSVKNNTQV
Sbjct: 5320 FNTGPLSVLMMSVKNNTQV 5376
Score = 36.8 bits (74), Expect(3) = 2e-033
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2 / -3
Query: 182 LGIILDAHHEHRERTGAELLFL 117
L +ILDAHH++RE G E LFL
Sbjct: 5373 LSVILDAHHKNREWPGVEFLFL 5308
>gb|AI999102.1|AI999102 701554462 A. thaliana, Columbia Col-0, rosette-3 Arabidopsis
thaliana cDNA clone 701554462, mRNA sequence
Length = 379
Score = 170 bits (365), Expect = 5e-041
Identities = 69/71 (97%), Positives = 71/71 (100%)
Frame = +3 / -1
Query: 192 NCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGD 371
NCRNN+KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVN+DRFISKMFLRGD
Sbjct: 379 NCRNNRKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGD 200
Query: 372 SVIIVLRNPK* 404
SVIIVLRNPK*
Sbjct: 199 SVIIVLRNPK* 167
Score = 139 bits (299), Expect = 6e-032
Identities = 59/70 (84%), Positives = 61/70 (87%)
Frame = -3 / +3
Query: 403 HFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKART 224
H GFLRT+MTESPRRNILLMN SL TGRAFF P PVFGTSVHISLTFSRTMLQC SKA T
Sbjct: 168 HLGFLRTIMTESPRRNILLMNRSLLTGRAFFFPFPVFGTSVHISLTFSRTMLQCLSKALT 347
Query: 223 RPSNFLLFRQ 194
RP +FLL RQ
Sbjct: 348 RPRSFLLLRQ 377
>gb|BP788381.1|BP788381 BP788381 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-33-J03 3',
mRNA sequence
Length = 403
Score = 163 bits (350), Expect = 6e-039
Identities = 67/69 (97%), Positives = 69/69 (100%)
Frame = +3 / -3
Query: 198 RNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSV 377
RNN+KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVN+DRFISKMFLRGDSV
Sbjct: 401 RNNRKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSV 222
Query: 378 IIVLRNPK* 404
IIVLRNPK*
Sbjct: 221 IIVLRNPK* 195
Score = 137 bits (294), Expect = 3e-031
Identities = 58/69 (84%), Positives = 60/69 (86%)
Frame = -3 / +1
Query: 403 HFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKART 224
H GFLRT+MTESPRRNILLMN SL TGRAFF P PVFGTSVHISLTFSRTMLQC SKA T
Sbjct: 196 HLGFLRTIMTESPRRNILLMNRSLLTGRAFFFPFPVFGTSVHISLTFSRTMLQCLSKALT 375
Query: 223 RPSNFLLFR 197
RP +FLL R
Sbjct: 376 RPRSFLLLR 402
>gb|BP665200.1|BP665200 BP665200 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-15-H11 3',
mRNA sequence
Length = 408
Score = 94.5 bits (200), Expect(4) = 1e-038
Identities = 38/40 (95%), Positives = 39/40 (97%)
Frame = +3 / -1
Query: 207 KKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALP 326
+KLLGRVRAFDRH NMVLENVREMWTEVPKTGKGKKKALP
Sbjct: 288 QKLLGRVRAFDRHSNMVLENVREMWTEVPKTGKGKKKALP 169
Score = 76.2 bits (160), Expect(3) = 2e-027
Identities = 31/39 (79%), Positives = 33/39 (84%)
Frame = -3 / +2
Query: 325 GRAFFLPLPVFGTSVHISLTFSRTMLQCRSKARTRPSNF 209
G AFFLP PVFGTSVHISLTFSRTML+C S A TRP +F
Sbjct: 170 GSAFFLPFPVFGTSVHISLTFSRTMLECLSNALTRPRSF 286
Score = 61.1 bits (127), Expect(3) = 2e-027
Identities = 25/33 (75%), Positives = 29/33 (87%)
Frame = -3 / +3
Query: 424 SLRVQATHFGFLRTMMTESPRRNILLMNLSLFT 326
SL + ++HFGFLR +MTESPRRNILLMN SLFT
Sbjct: 72 SLSLSSSHFGFLRRIMTESPRRNILLMNRSLFT 170
Score = 58.3 bits (121), Expect(4) = 1e-038
Identities = 24/32 (75%), Positives = 30/32 (93%)
Frame = +3 / -3
Query: 309 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 404
++++ VN+DRFISKMFLRGDSVII+LRNPK*
Sbjct: 187 QEESTSVNRDRFISKMFLRGDSVIILLRNPK* 92
Score = 40.9 bits (83), Expect(4) = 1e-038
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = +3 / -3
Query: 129 FSTGPLSVLMMSVKNNTQ 182
F+TGPLSVLMMS+KNNTQ
Sbjct: 364 FNTGPLSVLMMSLKNNTQ 311
Score = 25.4 bits (49), Expect(3) = 2e-027
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -3 / +1
Query: 220 PSNFLLFRQLIRT 182
P FLLFR+LI+T
Sbjct: 274 PKKFLLFRELIKT 312
Score = 24.0 bits (46), Expect(4) = 1e-038
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3 / -2
Query: 183 VLINCRNNKKLLG 221
VLIN RNN+ LG
Sbjct: 311 VLINSRNNRNFLG 273
>gb|BP854615.1|BP854615 BP854615 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-23-N20 5',
mRNA sequence
Length = 371
Score = 159 bits (341), Expect = 1e-037
Identities = 64/66 (96%), Positives = 66/66 (100%)
Frame = +3 / +1
Query: 129 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 308
F+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 169 FNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 348
Query: 309 KKKALP 326
KKKALP
Sbjct: 349 KKKALP 366
Score = 117 bits (251), Expect = 3e-025
Identities = 51/63 (80%), Positives = 53/63 (84%)
Frame = -3 / -1
Query: 325 GRAFFLPLPVFGTSVHISLTFSRTMLQCRSKARTRPSNFLLFRQLIRTWVLFLTLIMSTE 146
GRAFF P PVFGTSVHISLTFSRTMLQC SKA TRP +FLL RQLI T VLFLTLI+ TE
Sbjct: 365 GRAFFFPFPVFGTSVHISLTFSRTMLQCLSKALTRPRSFLLLRQLINT*VLFLTLIIKTE 186
Query: 145 RGP 137
GP
Sbjct: 185 SGP 177
>gb|BP621376.1|BP621376 BP621376 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-41-B20 3',
mRNA sequence
Length = 426
Score = 158 bits (339), Expect = 2e-037
Identities = 66/73 (90%), Positives = 69/73 (94%)
Frame = +3 / -3
Query: 180 QVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMF 359
+VLIN NN+KLLGRVRAFDRH NMVLENVREMWTEVPKTGKGKKKALPVN+DRFISKMF
Sbjct: 415 RVLINSPNNRKLLGRVRAFDRHSNMVLENVREMWTEVPKTGKGKKKALPVNRDRFISKMF 236
Query: 360 LRGDSVIIVLRNP 398
LRGDSVIIVLR P
Sbjct: 235 LRGDSVIIVLRTP 197
Score = 133 bits (284), Expect = 8e-030
Identities = 57/72 (79%), Positives = 61/72 (84%)
Frame = -3 / +3
Query: 397 GFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKARTRP 218
G LRT+MTESPRRNILLMN SL TGRAFF P PVFGTSVHISLTFSRTML+C SKA TRP
Sbjct: 198 GVLRTIMTESPRRNILLMNRSLLTGRAFFFPFPVFGTSVHISLTFSRTMLECLSKALTRP 377
Query: 217 SNFLLFRQLIRT 182
+FLL +LI T
Sbjct: 378 RSFLLLGELINT 413
>gb|AV832022.1|AV832022 AV832022 RAFL11 Arabidopsis thaliana cDNA clone RAFL11-01-A19 5',
mRNA sequence
Length = 547
Score = 139 bits (298), Expect(2) = 8e-037
Identities = 57/58 (98%), Positives = 58/58 (100%)
Frame = +3 / +2
Query: 231 AFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 404
AFDRHCNMVLENVREMWTEVPKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 254 AFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 427
Score = 122 bits (260), Expect(2) = 3e-036
Identities = 51/58 (87%), Positives = 52/58 (89%)
Frame = -3 / -2
Query: 403 HFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKA 230
H GFLRT+MTESPRRNILLMN SL TGRAFF P PVFGTSVHISLTFSRTMLQC SKA
Sbjct: 426 HLGFLRTIMTESPRRNILLMNRSLLTGRAFFFPFPVFGTSVHISLTFSRTMLQCLSKA 253
Score = 52.4 bits (108), Expect(2) = 3e-036
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = -3 / -1
Query: 235 KARTRPSNFLLFRQLIRTWVLFLTLIMSTERGP 137
K+ TRP +FLL RQLI T VLFLTLI+ TE GP
Sbjct: 259 KSLTRPRSFLLLRQLINT*VLFLTLIIKTESGP 161
Score = 36.8 bits (74), Expect(2) = 8e-037
Identities = 20/42 (47%), Positives = 23/42 (54%)
Frame = +2 / +2
Query: 95 GRNQHKKGGRGVQHRSSLGAHDERQE*YPGSYQLPEQQEVAW 220
G K G GVQH ++L DE E*+ G QLP QQE W
Sbjct: 119 GYQPGKD*GGGVQHWTTLCFDDEC*E*HSGVDQLP*QQETPW 244
>gb|AY042797.1| Arabidopsis thaliana small nuclear ribonucleoprotein-like protein
(F26K9.270) mRNA, complete cds
Length = 541
Score = 139 bits (298), Expect(2) = 8e-037
Identities = 57/58 (98%), Positives = 58/58 (100%)
Frame = +3 / +1
Query: 231 AFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 404
AFDRHCNMVLENVREMWTEVPKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 256 AFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 429
Score = 122 bits (260), Expect(2) = 3e-036
Identities = 51/58 (87%), Positives = 52/58 (89%)
Frame = -3 / -3
Query: 403 HFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKA 230
H GFLRT+MTESPRRNILLMN SL TGRAFF P PVFGTSVHISLTFSRTMLQC SKA
Sbjct: 428 HLGFLRTIMTESPRRNILLMNRSLLTGRAFFFPFPVFGTSVHISLTFSRTMLQCLSKA 255
Score = 79.0 bits (166), Expect(2) = 9e-021
Identities = 31/68 (45%), Positives = 47/68 (69%)
Frame = -2 / -2
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
S VPED++D + T+EHLA E + V+R+S LL+F+G R L PH ++ KNHVAVP++
Sbjct: 429 SLGVPEDDND*VSTQEHLADESISVNRKSFLLSFSGFRNLSPHFSDIFKNHVAVPVKSLT 250
Query: 224 ATKQLLVV 201
+ L++
Sbjct: 249 RPRSFLLL 226
Score = 52.4 bits (108), Expect(2) = 3e-036
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = -3 / -2
Query: 235 KARTRPSNFLLFRQLIRTWVLFLTLIMSTERGP 137
K+ TRP +FLL RQLI T VLFLTLI+ TE GP
Sbjct: 261 KSLTRPRSFLLLRQLINT*VLFLTLIIKTESGP 163
Score = 43.2 bits (88), Expect(2) = 9e-021
Identities = 16/37 (43%), Positives = 27/37 (72%)
Frame = -2 / -1
Query: 227 HATKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFL 117
++ K+ VV A+D++L +IL+ HH++RE + ELL L
Sbjct: 253 NSAKEFPVVTAIDQHLSVILNTHHQNREWSSVELLLL 143
Score = 36.8 bits (74), Expect(2) = 8e-037
Identities = 20/42 (47%), Positives = 23/42 (54%)
Frame = +2 / +1
Query: 95 GRNQHKKGGRGVQHRSSLGAHDERQE*YPGSYQLPEQQEVAW 220
G K G GVQH ++L DE E*+ G QLP QQE W
Sbjct: 121 GYQPGKD*GGGVQHWTTLCFDDEC*E*HSGVDQLP*QQETPW 246
>gb|BP851888.1|BP851888 BP851888 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-17-N19 5',
mRNA sequence
Length = 388
Score = 155 bits (334), Expect = 1e-036
Identities = 63/65 (96%), Positives = 65/65 (100%)
Frame = +3 / +2
Query: 129 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 308
F+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 167 FNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 346
Query: 309 KKKAL 323
KKKAL
Sbjct: 347 KKKAL 361
Score = 115 bits (246), Expect = 1e-024
Identities = 50/61 (81%), Positives = 53/61 (86%)
Frame = -3 / -2
Query: 319 AFFLPLPVFGTSVHISLTFSRTMLQCRSKARTRPSNFLLFRQLIRTWVLFLTLIMSTERG 140
AFFLP PVFGTSVHISLTFSRTMLQC S A TRP +FLLFRQLI+T VLFLTLI+ TE G
Sbjct: 357 AFFLPFPVFGTSVHISLTFSRTMLQCLSNALTRPRSFLLFRQLIKT*VLFLTLIIRTESG 178
Query: 139 P 137
P
Sbjct: 177 P 175
>gb|AV818857.1|AV818857 AV818857 RAFL11 Arabidopsis thaliana cDNA clone RAFL11-01-A19 3',
mRNA sequence
Length = 412
Score = 139 bits (298), Expect(2) = 1e-036
Identities = 57/58 (98%), Positives = 58/58 (100%)
Frame = +3 / -1
Query: 231 AFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 404
AFDRHCNMVLENVREMWTEVPKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 286 AFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 113
Score = 122 bits (260), Expect(2) = 3e-036
Identities = 51/58 (87%), Positives = 52/58 (89%)
Frame = -3 / +3
Query: 403 HFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKA 230
H GFLRT+MTESPRRNILLMN SL TGRAFF P PVFGTSVHISLTFSRTMLQC SKA
Sbjct: 114 HLGFLRTIMTESPRRNILLMNRSLLTGRAFFFPFPVFGTSVHISLTFSRTMLQCLSKA 287
Score = 79.0 bits (166), Expect(2) = 9e-021
Identities = 31/68 (45%), Positives = 47/68 (69%)
Frame = -2 / +2
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
S VPED++D + T+EHLA E + V+R+S LL+F+G R L PH ++ KNHVAVP++
Sbjct: 113 SLGVPEDDND*VSTQEHLADESISVNRKSFLLSFSGFRNLSPHFSDIFKNHVAVPVKSLT 292
Query: 224 ATKQLLVV 201
+ L++
Sbjct: 293 RPRSFLLL 316
Score = 52.4 bits (108), Expect(2) = 3e-036
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = -3 / +2
Query: 235 KARTRPSNFLLFRQLIRTWVLFLTLIMSTERGP 137
K+ TRP +FLL RQLI T VLFLTLI+ TE GP
Sbjct: 281 KSLTRPRSFLLLRQLINT*VLFLTLIIKTESGP 379
Score = 43.2 bits (88), Expect(2) = 9e-021
Identities = 16/37 (43%), Positives = 27/37 (72%)
Frame = -2 / +1
Query: 227 HATKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFL 117
++ K+ VV A+D++L +IL+ HH++RE + ELL L
Sbjct: 289 NSAKEFPVVTAIDQHLSVILNTHHQNREWSSVELLLL 399
Score = 36.3 bits (73), Expect(2) = 1e-036
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = +2 / -1
Query: 119 GRGVQHRSSLGAHDERQE*YPGSYQLPEQQEVAW 220
G GVQH ++L DE E*+ G QLP QQE W
Sbjct: 397 GGGVQHWTTLCFDDEC*E*HSGVDQLP*QQETPW 296
>gb|BP636278.1|BP636278 BP636278 RAFL18 Arabidopsis thaliana cDNA clone RAFL18-03-P22 3',
mRNA sequence
Length = 469
Score = 83.1 bits (175), Expect(3) = 1e-035
Identities = 35/37 (94%), Positives = 37/37 (100%)
Frame = +3 / -3
Query: 294 KTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 404
+TGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 350 ETGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 240
Score = 65.2 bits (136), Expect(3) = 1e-035
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = +3 / -1
Query: 216 LGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKK 317
L + AFDRHCNMVLENVREMWTEVPK K ++K
Sbjct: 427 LAELGAFDRHCNMVLENVREMWTEVPKPEKERRK 326
Score = 41.8 bits (85), Expect(3) = 1e-035
Identities = 17/20 (85%), Positives = 17/20 (85%)
Frame = +3 / -3
Query: 177 TQVLINCRNNKKLLGRVRAF 236
TQ LINCRNN KLLGRVR F
Sbjct: 467 TQWLINCRNNTKLLGRVRGF 408
>gb|AV549536.1|AV549536 AV549536 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ09a07R 5', mRNA sequence
Length = 352
Score = 150 bits (322), Expect = 4e-035
Identities = 62/63 (98%), Positives = 63/63 (100%)
Frame = +3 / +1
Query: 216 LGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRN 395
LGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRN
Sbjct: 1 LGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRN 180
Query: 396 PK* 404
PK*
Sbjct: 181 PK* 189
Score = 135 bits (290), Expect = 1e-030
Identities = 57/69 (82%), Positives = 61/69 (88%)
Frame = -3 / -3
Query: 424 SLRVQATHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ 245
SL + ++HFGFLRT+MTESPRRNILLMN SLFTG AFFLP PVFGTSVHISLTFSRTMLQ
Sbjct: 209 SLSLSSSHFGFLRTIMTESPRRNILLMNRSLFTGSAFFLPFPVFGTSVHISLTFSRTMLQ 30
Query: 244 CRSKARTRP 218
C S A TRP
Sbjct: 29 CLSNALTRP 3
>gb|BP650469.1|BP650469 BP650469 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-84-H22 3',
mRNA sequence
Length = 410
Score = 95.0 bits (201), Expect(2) = 1e-034
Identities = 37/45 (82%), Positives = 41/45 (91%)
Frame = +3 / -1
Query: 186 LINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKA 320
LINC NN+KLLGRVRAFDRHCNMVLENVREMWTEVPKT K ++ +
Sbjct: 410 LINCLNNRKLLGRVRAFDRHCNMVLENVREMWTEVPKTEKKEESS 276
Score = 73.9 bits (155), Expect(2) = 1e-034
Identities = 32/34 (94%), Positives = 33/34 (97%)
Frame = +3 / -2
Query: 303 KGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 404
K KKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 295 KRKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 194
>gb|BP869127.1|BP869127 BP869127 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-86-N16 5',
mRNA sequence
Length = 361
Score = 148 bits (318), Expect = 2e-034
Identities = 65/88 (73%), Positives = 67/88 (76%)
Frame = +3 / +1
Query: 87 PMAXXXXXXXXXXXFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 266
PM TGPLSV MMSVKNNTQVLIN RN +KLLGRVRA DRH MVLEN
Sbjct: 97 PMEEDTNGKTEEEELKTGPLSVWMMSVKNNTQVLINGRNKRKLLGRVRASDRHGKMVLEN 276
Query: 267 VREMWTEVPKTGKGKKKALPVNKDRFIS 350
VREMWTEVPKTGKGK KALPVN+DRFIS
Sbjct: 277 VREMWTEVPKTGKGKNKALPVNRDRFIS 360
Score = 117 bits (251), Expect = 3e-025
Identities = 52/71 (73%), Positives = 56/71 (78%)
Frame = -3 / -3
Query: 349 LMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKARTRPSNFLLFRQLIRTWVLF 170
LMN SL TGRA F P PVFGTSVHISLTFSRT+L C S+A TRP +FLL R LI T VLF
Sbjct: 359 LMNRSLLTGRALFFPFPVFGTSVHISLTFSRTILPCLSEALTRPRSFLLLRPLINT*VLF 180
Query: 169 LTLIMSTERGP 137
LTLI+ TE GP
Sbjct: 179 LTLIIQTESGP 147
>gb|BP858325.1|BP858325 BP858325 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-36-N11 5',
mRNA sequence
Length = 398
Score = 100 bits (212), Expect(2) = 2e-034
Identities = 39/46 (84%), Positives = 42/46 (91%)
Frame = +3 / +1
Query: 216 LGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISK 353
L + FDRHCNMVLENVREMWTEVPKTGKGKKKALPVN+DRFIS+
Sbjct: 232 LAELGPFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNRDRFISQ 369
Score = 82.2 bits (173), Expect(2) = 2e-022
Identities = 35/47 (74%), Positives = 35/47 (74%)
Frame = -3 / -1
Query: 349 LMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKARTRPSNF 209
LMN SL TGRAFF P PVFGTSVHISLTFSRTMLQC SK F
Sbjct: 365 LMNRSLLTGRAFFFPFPVFGTSVHISLTFSRTMLQCLSKGPNSAKEF 225
Score = 68.0 bits (142), Expect(2) = 2e-034
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = +3 / +3
Query: 150 VLMMSVKNNTQVLINCRNNKKLLGRVRAF 236
VLMMSVKNNTQVLINCRNN+KLLGRVRAF
Sbjct: 165 VLMMSVKNNTQVLINCRNNRKLLGRVRAF 251
Score = 46.0 bits (94), Expect(2) = 2e-022
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = -3 / -2
Query: 235 KARTRPSNFLLFRQLIRTWVLFLTLIMST 149
KA TRP +FLL RQLI T VLFLTLI+ T
Sbjct: 250 KALTRPRSFLLLRQLINT*VLFLTLIIKT 164
>gb|AV820625.1|AV820625 AV820625 RAFL11 Arabidopsis thaliana cDNA clone RAFL11-11-H04 3',
mRNA sequence
Length = 404
Score = 122 bits (262), Expect(2) = 7e-033
Identities = 55/75 (73%), Positives = 59/75 (78%)
Frame = +3 / -2
Query: 180 QVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMF 359
QVLINCRN+ KLLGRVR L+ + EVPKTGKGKKKALPVN+DRFISKMF
Sbjct: 337 QVLINCRNDTKLLGRVRLLTGTATWFLKMSEKCGAEVPKTGKGKKKALPVNRDRFISKMF 158
Query: 360 LRGDSVIIVLRNPK* 404
LRGDSVIIVLRNPK*
Sbjct: 157 LRGDSVIIVLRNPK* 113
Score = 84.0 bits (177), Expect(4) = 1e-026
Identities = 34/40 (85%), Positives = 35/40 (87%)
Frame = -3 / +3
Query: 403 HFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTS 284
H GFLRT+MTESPRRNILLMN SL TGRAFF P PVFGTS
Sbjct: 114 HLGFLRTIMTESPRRNILLMNRSLLTGRAFFFPFPVFGTS 233
Score = 40.0 bits (81), Expect(2) = 7e-033
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +3 / -1
Query: 129 FSTGPLSVLMMSVKNNT 179
F+TGPLSVLMMSVKNNT
Sbjct: 389 FNTGPLSVLMMSVKNNT 339
Score = 39.6 bits (80), Expect(4) = 1e-026
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -3 / +1
Query: 283 VHISLTFSRTMLQCRSKA 230
+HISLTFSRTMLQC SKA
Sbjct: 235 LHISLTFSRTMLQCLSKA 288
Score = 27.6 bits (54), Expect(4) = 1e-026
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -3 / +1
Query: 178 VLFLTLIMSTERGP 137
VLFLTLI+ TE GP
Sbjct: 340 VLFLTLIIKTESGP 381
Score = 25.4 bits (49), Expect(4) = 1e-026
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3 / +3
Query: 235 KARTRPSNFLLFRQLIRT 182
K+ TRP +F+ RQLI T
Sbjct: 282 KSLTRPRSFVSLRQLINT 335
>gb|BP831765.1|BP831765 BP831765 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-90-C10 5',
mRNA sequence
Length = 364
Score = 141 bits (303), Expect = 2e-032
Identities = 57/64 (89%), Positives = 62/64 (96%)
Frame = +3 / +2
Query: 129 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 308
F+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENVREMWTEVPKT K
Sbjct: 146 FNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVREMWTEVPKTRKR 325
Query: 309 KKKA 320
K+++
Sbjct: 326 KEES 337
Score = 99.1 bits (210), Expect(2) = 9e-024
Identities = 44/54 (81%), Positives = 46/54 (85%)
Frame = -3 / -2
Query: 298 VFGTSVHISLTFSRTMLQCRSKARTRPSNFLLFRQLIRTWVLFLTLIMSTERGP 137
VFGTSVHISLTFSRTMLQC SKA TRP +FLL RQLI T VLFLTLI+ TE GP
Sbjct: 315 VFGTSVHISLTFSRTMLQCLSKALTRPRSFLLLRQLINT*VLFLTLIIKTESGP 154
Score = 33.1 bits (66), Expect(2) = 9e-024
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = -3 / -1
Query: 346 MNLSLFTGRAFFLPLPVF 293
MN SL TGRAFF P P F
Sbjct: 364 MNRSLLTGRAFFFPFPGF 311
>gb|BP623210.1|BP623210 BP623210 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-05-P16 3',
mRNA sequence
Length = 368
Score = 139 bits (298), Expect = 9e-032
Identities = 57/58 (98%), Positives = 58/58 (100%)
Frame = +3 / -2
Query: 231 AFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 404
AFDRHCNMVLENVREMWTEVPKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 367 AFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 194
Score = 128 bits (275), Expect = 1e-028
Identities = 54/65 (83%), Positives = 58/65 (89%)
Frame = -3 / +3
Query: 424 SLRVQATHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ 245
SL + ++HFGFLRT+MTESPRRNILLMN SLFTG AFFLP PVFGTSVHISLTFSRTMLQ
Sbjct: 174 SLSLSSSHFGFLRTIMTESPRRNILLMNRSLFTGSAFFLPFPVFGTSVHISLTFSRTMLQ 353
Query: 244 CRSKA 230
C S A
Sbjct: 354 CLSNA 368
>gb|H36625.1|H36625 14293 Lambda-PRL2 Arabidopsis thaliana cDNA clone 175N1T7, mRNA
sequence
Length = 450
Score = 136 bits (292), Expect(2) = 1e-031
Identities = 56/77 (72%), Positives = 60/77 (77%)
Frame = +3 / +2
Query: 87 PMAXXXXXXXXXXXFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 266
PM F+TGPLSV MMSVKNNTQVLINCRNN+KLLGRVRAF RHCNMVLEN
Sbjct: 119 PMEEDTNGKTEEEEFNTGPLSVXMMSVKNNTQVLINCRNNRKLLGRVRAFXRHCNMVLEN 298
Query: 267 VREMWTEVPKTGKGKKK 317
R MWTEVPKTGKG ++
Sbjct: 299 XRXMWTEVPKTGKGXER 349
Score = 22.1 bits (42), Expect(2) = 1e-031
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +3 / +2
Query: 309 KKKALPVNKDRFISK 353
++K N+DRFISK
Sbjct: 344 ERKXFLFNRDRFISK 388
>gb|BP864529.1|BP864529 BP864529 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-70-I12 5',
mRNA sequence
Length = 390
Score = 119 bits (254), Expect(2) = 2e-031
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = +3 / +3
Query: 234 FDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSV 377
FDRHCNMVLENVREMWTEVPKTGKGKKKALPVN+DRFISKMFLRGDSV
Sbjct: 246 FDRHCNMVLENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSV 389
Score = 101 bits (216), Expect(2) = 8e-031
Identities = 43/48 (89%), Positives = 43/48 (89%)
Frame = -3 / -3
Query: 376 TESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSK 233
TESPRRNILLMN SL TGRAFF P PVFGTSVHISLTFSRTMLQC SK
Sbjct: 388 TESPRRNILLMNRSLLTGRAFFFPFPVFGTSVHISLTFSRTMLQCLSK 245
Score = 54.2 bits (112), Expect(2) = 8e-031
Identities = 27/57 (47%), Positives = 34/57 (59%)
Frame = -3 / -2
Query: 235 KARTRPSNFLLFRQLIRTWVLFLTLIMSTERGPXXXXXXXXXXXXXSAMGANWSRQS 65
KA TRP +FLL RQLI T VLFLTLI+ TE GP S++G + S ++
Sbjct: 248 KALTRPRSFLLLRQLINT*VLFLTLIIKTESGPVLNSSSSVFPLVSSSIGYSCSLEA 78
Score = 39.1 bits (79), Expect(2) = 2e-031
Identities = 21/44 (47%), Positives = 25/44 (56%)
Frame = +2 / +3
Query: 89 HGGRNQHKKGGRGVQHRSSLGAHDERQE*YPGSYQLPEQQEVAW 220
+G Q K G GVQH ++L DE E*+ G QLP QQE W
Sbjct: 102 NGRGYQRKD*GGGVQHWTTLCFDDEC*E*HSGVDQLP*QQETPW 233
>gb|BP851641.1|BP851641 BP851641 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-17-B11 5',
mRNA sequence
Length = 396
Score = 109 bits (233), Expect(2) = 1e-030
Identities = 42/45 (93%), Positives = 44/45 (97%)
Frame = +3 / +3
Query: 189 INCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAL 323
+NCRNN+KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG KKAL
Sbjct: 228 LNCRNNRKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGNKKAL 362
Score = 85.4 bits (180), Expect(2) = 1e-021
Identities = 36/43 (83%), Positives = 37/43 (86%)
Frame = -3 / -3
Query: 319 AFFLPLPVFGTSVHISLTFSRTMLQCRSKARTRPSNFLLFRQL 191
AF LP PVFGTSVHISLTFSRTMLQC S A TRP +FLLFRQL
Sbjct: 358 AFLLPFPVFGTSVHISLTFSRTMLQCLSNALTRPRSFLLFRQL 230
Score = 46.0 bits (94), Expect(2) = 1e-030
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +3 / +2
Query: 129 FSTGPLSVLMMSVKNNTQVL 188
F+TGPLSVLMMSVKNNTQVL
Sbjct: 167 FNTGPLSVLMMSVKNNTQVL 226
Score = 39.6 bits (80), Expect(2) = 1e-021
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -2 / -3
Query: 185 NLGIILDAHHEHRERTGAELLFL 117
NL +ILDAHH++RE G E LFL
Sbjct: 223 NLSVILDAHHKNREWPGVEFLFL 155
>gb|BP868432.1|BP868432 BP868432 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-84-F15 5',
mRNA sequence
Length = 396
Score = 115 bits (245), Expect(2) = 1e-028
Identities = 46/49 (93%), Positives = 47/49 (95%)
Frame = +3 / +2
Query: 234 FDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVI 380
FDRHCNMVLENVREMWTEVPKTGKGKKKALPV +DRFISKMFL GDSVI
Sbjct: 248 FDRHCNMVLENVREMWTEVPKTGKGKKKALPVKRDRFISKMFLGGDSVI 394
Score = 100 bits (212), Expect(2) = 4e-030
Identities = 42/50 (84%), Positives = 44/50 (88%)
Frame = -3 / -1
Query: 382 MMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSK 233
+MTESP +NILLMN SL TGRAFF P PVFGTSVHISLTFSRTMLQC SK
Sbjct: 396 IMTESPPKNILLMNRSLLTGRAFFFPFPVFGTSVHISLTFSRTMLQCLSK 247
Score = 53.8 bits (111), Expect(2) = 4e-030
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = -3 / -3
Query: 235 KARTRPSNFLLFRQLIRTWVLFLTLIMSTERGP 137
KA TRP +FLL RQLI T VLFLTLI+ TE GP
Sbjct: 250 KALTRPRSFLLLRQLINT*VLFLTLIIKTESGP 152
Score = 33.6 bits (67), Expect(2) = 1e-028
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = +2 / +2
Query: 95 GRNQHKKGGRGVQHRSSLGAHDERQE*YPGSYQLPEQQEVAW 220
G K G GVQ+ ++L DE E*+ G QLP QQE W
Sbjct: 110 GYQPGKD*GGGVQNWTTLCFDDEC*E*HSGVDQLP*QQETPW 235
>gb|BP867804.1|BP867804 BP867804 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-82-E04 5',
mRNA sequence
Length = 377
Score = 133 bits (285), Expect = 5e-030
Identities = 52/63 (82%), Positives = 59/63 (93%)
Frame = +3 / +1
Query: 129 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 308
F+TGPLSV+MMSVKNNT+VLINCR N+KLLGRVRA DRHC+MV E VREMWTEVPKTGKG
Sbjct: 163 FNTGPLSVIMMSVKNNTKVLINCRKNRKLLGRVRASDRHCHMVFETVREMWTEVPKTGKG 342
Query: 309 KKK 317
++K
Sbjct: 343 RRK 351
>gb|BP844944.1|BP844944 BP844944 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-92-A02 5',
mRNA sequence
Length = 383
Score = 113 bits (241), Expect(2) = 7e-030
Identities = 45/53 (84%), Positives = 47/53 (88%)
Frame = +3 / +1
Query: 186 LINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRF 344
LINCR N+KL GRVRAFDRHCNMVLENVREMW EV KTGKG KKAL VN+DRF
Sbjct: 223 LINCRKNRKLFGRVRAFDRHCNMVLENVREMWPEVRKTGKGTKKALAVNRDRF 381
Score = 93.6 bits (198), Expect(2) = 2e-024
Identities = 40/54 (74%), Positives = 43/54 (79%)
Frame = -3 / -1
Query: 346 MNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKARTRPSNFLLFRQLIR 185
MN SLFT AFF+P PVF TS HISLTFSRTMLQC S A TRP +FL FRQLI+
Sbjct: 383 MNRSLFTASAFFVPFPVFRTSGHISLTFSRTMLQCLSNALTRPKSFLFFRQLIK 222
Score = 40.9 bits (83), Expect(2) = 2e-024
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = -2 / -2
Query: 185 NLGIILDAHHEHRERTGAELLFLLFYVGFFRH 90
NL +ILDAHH++RE G LFL +G H
Sbjct: 223 NLSVILDAHHKNREWPGVGFLFLSLAIGILFH 128
Score = 39.6 bits (80), Expect(2) = 7e-030
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +3 / +2
Query: 132 STGPLSVLMMSVKNNTQV 185
+TGPLSV MMSVKNNTQV
Sbjct: 170 NTGPLSVFMMSVKNNTQV 223
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,242,733,459
Number of Sequences: 1013581
Number of extensions: 16174450
Number of successful extensions: 137754
Number of sequences better than 1.0e-020: 64
length of database: 302,980,290
effective HSP length: 55
effective length of database: 247,233,335
effective search space used: 41782433615
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)