TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2950292.2.1
(1205 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|NM_127085.3| Arabidopsis thaliana unknown protein AT2G1... 247 e-123
gb|AF378872.1|AF378872 Arabidopsis thaliana At2g15240/F15A2... 247 e-123
gb|AY052736.1| Arabidopsis thaliana At2g15240/F15A23.2 mRNA... 247 e-123
emb|BX820218.1|CNS0AA37 Arabidopsis thaliana Full-length cD... 247 e-123
emb|AX505576.1| Sequence 271 from Patent WO0216655 220 e-118
gb|BE037686.1|BE037686 AA02G05 AA Arabidopsis thaliana cDNA... 220 e-102
gb|AV821307.1|AV821307 AV821307 RAFL3 Arabidopsis thaliana ... 220 e-101
gb|AY084886.1| Arabidopsis thaliana clone 120231 mRNA, comp... 248 6e-080
gb|AV781680.1|AV781680 AV781680 RAFL3 Arabidopsis thaliana ... 247 1e-064
gb|AC006298.13| Arabidopsis thaliana chromosome 2 clone F15... 88 3e-064
gb|AV441458.1|AV441458 AV441458 Arabidopsis thaliana above-... 212 2e-053
gb|AA041159.1|AA041159 24425 CD4-13 Arabidopsis thaliana cD... 203 9e-051
gb|T22013.1|T22013 4021 Lambda-PRL2 Arabidopsis thaliana cD... 198 3e-049
gb|N38189.1|N38189 19416 Lambda-PRL2 Arabidopsis thaliana c... 173 1e-041
gb|AV561346.1|AV561346 AV561346 Arabidopsis thaliana green ... 165 3e-039
gb|AI994765.1|AI994765 701499621 A. thaliana, Ohio State cl... 157 5e-037
gb|BP856345.1|BP856345 BP856345 RAFL21 Arabidopsis thaliana... 87 2e-025
gb|CF773763.1|CF773763 AG_FSL_22C10 Arabidopsis ag-1 35S:AG... 107 6e-022
>ref|NM_127085.3| Arabidopsis thaliana unknown protein AT2G15240 mRNA, complete cds
Length = 1315
Score = 247 bits (533), Expect(2) = e-123
Identities = 94/115 (81%), Positives = 106/115 (92%)
Frame = +2 / +3
Query: 488 EEPNSHVVEQRVEWLYAFDVHCNSFFPAFVILYVVQYFLSPLLVAHGFFPALLSNLLFVV 667
E PNSHVVEQRVEWLY FDVHCNSFFP FV+LYVV YFLSPLL+AHGF P LLSNLLF+V
Sbjct: 501 ETPNSHVVEQRVEWLYTFDVHCNSFFPMFVLLYVVHYFLSPLLIAHGFIPLLLSNLLFMV 680
Query: 668 AISYYHYLNFLGYDVLPFLDRTTFFLYPIGLVIILSPLMILIGFNPTRYFLSLYF 832
SYYHYLNFLGYDVLPFL+RTTFFLYPIG+VI+LSP++IL GFNP+RYF+++YF
Sbjct: 681 GASYYHYLNFLGYDVLPFLERTTFFLYPIGVVIVLSPILILSGFNPSRYFMNMYF 845
Score = 220 bits (474), Expect(2) = e-123
Identities = 84/114 (73%), Positives = 93/114 (81%)
Frame = +2 / +3
Query: 152 FFFYLRRIVKWQQRDIEYTFWQMVHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVILIL 331
F Y RRIVKWQQ D+EYTFWQM++LCTSPKVVYQHTKYHKQTKNQWARDDPAF+VI L
Sbjct: 162 FLQYFRRIVKWQQMDVEYTFWQMLNLCTSPKVVYQHTKYHKQTKNQWARDDPAFIVICSL 341
Query: 332 FLVFATSAYCAAYGESASHAALTITSVVFLHFLFAGIVLATLCWFLTNSYLREE 493
LV AT AYC Y S+SHA + + SV+F HFL G V+AT CWFLTNSYLREE
Sbjct: 342 LLVVATVAYCVTYDHSSSHAVVVVVSVLFTHFLITGAVIATCCWFLTNSYLREE 503
Score = 163 bits (350), Expect(2) = 1e-080
Identities = 72/107 (67%), Positives = 80/107 (74%)
Frame = -3 / -1
Query: 492 SSLK*EFVRNQQSVAKTIPANKKWRNTTEVIVRAACEALSPYAAQ*ADVANTRKRIRITT 313
SS +*EFV+NQQ VA T P KKW N TE A E L Y Q*A VA TR R++IT
Sbjct: 502 SSRR*EFVKNQQHVAITAPVIKKWVNKTETTTTTA*ELLWSYVTQ*ATVATTRSRLQITI 323
Query: 312 NAGSSRAHWFFVCL*YLVC**TTFGEVQR*TICQNVYSISLCCHLTM 172
NAGSSRAHWF VCL*YLVC**TTFG+VQR +ICQ VYS S+CCHLT+
Sbjct: 322 NAGSSRAHWFLVCL*YLVC**TTFGDVQRLSICQKVYSTSICCHLTI 182
Score = 160 bits (344), Expect(2) = 1e-080
Identities = 75/115 (65%), Positives = 79/115 (68%)
Frame = -3 / -1
Query: 831 KYKLRKYLVGLNPISIISGDRMMTRPIGYRKNVVLSRNGRTSYPRKFR****EIATTKSR 652
KY KYL GLNP+ I GDR MT PIG RKNVV S+NG TSYPRK R* * E T KSR
Sbjct: 844 KYMFMKYLDGLNPLKIRIGDRTMTTPIG*RKNVVRSKNGSTSYPRKLR*W*YEAPTMKSR 665
Query: 651 LDNKAGKKPCATNRGDRKYCTTYRMTNAGKNELQ*TSNA*SHSTRCSTTWLLGSS 487
D+ G PCA GD+K CTT TN GKNELQ*TSN SHSTRCSTT L G S
Sbjct: 664 FDSSKGMNPCAIRSGDKK*CTT*SSTNIGKNELQ*TSNVYSHSTRCSTT*LFGVS 500
Score = 102 bits (217), Expect(2) = 1e-038
Identities = 48/113 (42%), Positives = 70/113 (61%)
Frame = -2 / -3
Query: 490 LSQVRICKEPAKCGQNYPSKQEMEKHNRSDC*SSM*GTLSICCTVS*CCKHEEKNQNNNK 311
L++VRIC++P C N EM + N +D M T+ I T+ C ++++ ++NK
Sbjct: 500 LAKVRICQKPTACSYNCSGD*EMGEQN*NDYDDGMRATMVIRDTIGYSCNNKKQATDHNK 321
Query: 310 CRIITGPLVLCLLVIFGVLIDYFW*STEMNHLPKCVFNIPLLPLDDAAEVKKK 152
R+IT PLVL L VI VLID F T++ HLP+ +FNI LLPL+D +V K+
Sbjct: 320 RRVITCPLVLSLFVILSVLIDNFRRCTKVKHLPESIFNIHLLPLNDTTKVLKE 162
Score = 80.8 bits (170), Expect(2) = 1e-038
Identities = 39/114 (34%), Positives = 69/114 (60%)
Frame = -2 / -3
Query: 838 LTEVQA*KVSCRIKPY*YHKWRQDDDETNRIQEECCXXXXXXXXXXXKVQVVIIRNCHHE 659
L EV ++S R++ * RQD+D ++ ++EECC +V+++++R+ HE
Sbjct: 851 LAEVHVHEIS*RVESA*DKNRRQDNDNSDWVEEECCSLQKWKHVIS*EVKIMVVRSPDHE 672
Query: 658 E*IR*QSWKEAMRDQ*RRQKILHHI*DDKRRKERVTMNVKCIEPLHALLNNMAV 497
+ IR*Q E++ Q R ++++ + K KERV +N+KCI+P +AL ++M V
Sbjct: 671 KQIR*Q*RDESVCYQER**EVMYDVEQHKHWKERVAVNIKCIQPFNALFHHMTV 510
>gb|AF378872.1|AF378872 Arabidopsis thaliana At2g15240/F15A23.2 mRNA, complete cds
Length = 1155
Score = 247 bits (533), Expect(2) = e-123
Identities = 94/115 (81%), Positives = 106/115 (92%)
Frame = +2 / +2
Query: 488 EEPNSHVVEQRVEWLYAFDVHCNSFFPAFVILYVVQYFLSPLLVAHGFFPALLSNLLFVV 667
E PNSHVVEQRVEWLY FDVHCNSFFP FV+LYVV YFLSPLL+AHGF P LLSNLLF+V
Sbjct: 479 ETPNSHVVEQRVEWLYTFDVHCNSFFPMFVLLYVVHYFLSPLLIAHGFIPLLLSNLLFMV 658
Query: 668 AISYYHYLNFLGYDVLPFLDRTTFFLYPIGLVIILSPLMILIGFNPTRYFLSLYF 832
SYYHYLNFLGYDVLPFL+RTTFFLYPIG+VI+LSP++IL GFNP+RYF+++YF
Sbjct: 659 GASYYHYLNFLGYDVLPFLERTTFFLYPIGVVIVLSPILILSGFNPSRYFMNMYF 823
Score = 220 bits (474), Expect(2) = e-123
Identities = 84/114 (73%), Positives = 93/114 (81%)
Frame = +2 / +2
Query: 152 FFFYLRRIVKWQQRDIEYTFWQMVHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVILIL 331
F Y RRIVKWQQ D+EYTFWQM++LCTSPKVVYQHTKYHKQTKNQWARDDPAF+VI L
Sbjct: 140 FLQYFRRIVKWQQMDVEYTFWQMLNLCTSPKVVYQHTKYHKQTKNQWARDDPAFIVICSL 319
Query: 332 FLVFATSAYCAAYGESASHAALTITSVVFLHFLFAGIVLATLCWFLTNSYLREE 493
LV AT AYC Y S+SHA + + SV+F HFL G V+AT CWFLTNSYLREE
Sbjct: 320 LLVVATVAYCVTYDHSSSHAVVVVVSVLFTHFLITGAVIATCCWFLTNSYLREE 481
Score = 163 bits (350), Expect(2) = 1e-080
Identities = 72/107 (67%), Positives = 80/107 (74%)
Frame = -3 / -1
Query: 492 SSLK*EFVRNQQSVAKTIPANKKWRNTTEVIVRAACEALSPYAAQ*ADVANTRKRIRITT 313
SS +*EFV+NQQ VA T P KKW N TE A E L Y Q*A VA TR R++IT
Sbjct: 480 SSRR*EFVKNQQHVAITAPVIKKWVNKTETTTTTA*ELLWSYVTQ*ATVATTRSRLQITI 301
Query: 312 NAGSSRAHWFFVCL*YLVC**TTFGEVQR*TICQNVYSISLCCHLTM 172
NAGSSRAHWF VCL*YLVC**TTFG+VQR +ICQ VYS S+CCHLT+
Sbjct: 300 NAGSSRAHWFLVCL*YLVC**TTFGDVQRLSICQKVYSTSICCHLTI 160
Score = 160 bits (344), Expect(2) = 1e-080
Identities = 75/115 (65%), Positives = 79/115 (68%)
Frame = -3 / -1
Query: 831 KYKLRKYLVGLNPISIISGDRMMTRPIGYRKNVVLSRNGRTSYPRKFR****EIATTKSR 652
KY KYL GLNP+ I GDR MT PIG RKNVV S+NG TSYPRK R* * E T KSR
Sbjct: 822 KYMFMKYLDGLNPLKIRIGDRTMTTPIG*RKNVVRSKNGSTSYPRKLR*W*YEAPTMKSR 643
Query: 651 LDNKAGKKPCATNRGDRKYCTTYRMTNAGKNELQ*TSNA*SHSTRCSTTWLLGSS 487
D+ G PCA GD+K CTT TN GKNELQ*TSN SHSTRCSTT L G S
Sbjct: 642 FDSSKGMNPCAIRSGDKK*CTT*SSTNIGKNELQ*TSNVYSHSTRCSTT*LFGVS 478
Score = 102 bits (217), Expect(2) = 1e-038
Identities = 48/113 (42%), Positives = 70/113 (61%)
Frame = -2 / -3
Query: 490 LSQVRICKEPAKCGQNYPSKQEMEKHNRSDC*SSM*GTLSICCTVS*CCKHEEKNQNNNK 311
L++VRIC++P C N EM + N +D M T+ I T+ C ++++ ++NK
Sbjct: 478 LAKVRICQKPTACSYNCSGD*EMGEQN*NDYDDGMRATMVIRDTIGYSCNNKKQATDHNK 299
Query: 310 CRIITGPLVLCLLVIFGVLIDYFW*STEMNHLPKCVFNIPLLPLDDAAEVKKK 152
R+IT PLVL L VI VLID F T++ HLP+ +FNI LLPL+D +V K+
Sbjct: 298 RRVITCPLVLSLFVILSVLIDNFRRCTKVKHLPESIFNIHLLPLNDTTKVLKE 140
Score = 80.8 bits (170), Expect(2) = 1e-038
Identities = 39/114 (34%), Positives = 69/114 (60%)
Frame = -2 / -3
Query: 838 LTEVQA*KVSCRIKPY*YHKWRQDDDETNRIQEECCXXXXXXXXXXXKVQVVIIRNCHHE 659
L EV ++S R++ * RQD+D ++ ++EECC +V+++++R+ HE
Sbjct: 829 LAEVHVHEIS*RVESA*DKNRRQDNDNSDWVEEECCSLQKWKHVIS*EVKIMVVRSPDHE 650
Query: 658 E*IR*QSWKEAMRDQ*RRQKILHHI*DDKRRKERVTMNVKCIEPLHALLNNMAV 497
+ IR*Q E++ Q R ++++ + K KERV +N+KCI+P +AL ++M V
Sbjct: 649 KQIR*Q*RDESVCYQER**EVMYDVEQHKHWKERVAVNIKCIQPFNALFHHMTV 488
>gb|AY052736.1| Arabidopsis thaliana At2g15240/F15A23.2 mRNA, complete cds
Length = 759
Score = 247 bits (533), Expect(2) = e-123
Identities = 94/115 (81%), Positives = 106/115 (92%)
Frame = +2 / +1
Query: 488 EEPNSHVVEQRVEWLYAFDVHCNSFFPAFVILYVVQYFLSPLLVAHGFFPALLSNLLFVV 667
E PNSHVVEQRVEWLY FDVHCNSFFP FV+LYVV YFLSPLL+AHGF P LLSNLLF+V
Sbjct: 400 ETPNSHVVEQRVEWLYTFDVHCNSFFPMFVLLYVVHYFLSPLLIAHGFIPLLLSNLLFMV 579
Query: 668 AISYYHYLNFLGYDVLPFLDRTTFFLYPIGLVIILSPLMILIGFNPTRYFLSLYF 832
SYYHYLNFLGYDVLPFL+RTTFFLYPIG+VI+LSP++IL GFNP+RYF+++YF
Sbjct: 580 GASYYHYLNFLGYDVLPFLERTTFFLYPIGVVIVLSPILILSGFNPSRYFMNMYF 744
Score = 220 bits (474), Expect(2) = e-123
Identities = 84/114 (73%), Positives = 93/114 (81%)
Frame = +2 / +1
Query: 152 FFFYLRRIVKWQQRDIEYTFWQMVHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVILIL 331
F Y RRIVKWQQ D+EYTFWQM++LCTSPKVVYQHTKYHKQTKNQWARDDPAF+VI L
Sbjct: 61 FLQYFRRIVKWQQMDVEYTFWQMLNLCTSPKVVYQHTKYHKQTKNQWARDDPAFIVICSL 240
Query: 332 FLVFATSAYCAAYGESASHAALTITSVVFLHFLFAGIVLATLCWFLTNSYLREE 493
LV AT AYC Y S+SHA + + SV+F HFL G V+AT CWFLTNSYLREE
Sbjct: 241 LLVVATVAYCVTYDHSSSHAVVVVVSVLFTHFLITGAVIATCCWFLTNSYLREE 402
Score = 163 bits (350), Expect(2) = 1e-080
Identities = 72/107 (67%), Positives = 80/107 (74%)
Frame = -3 / -2
Query: 492 SSLK*EFVRNQQSVAKTIPANKKWRNTTEVIVRAACEALSPYAAQ*ADVANTRKRIRITT 313
SS +*EFV+NQQ VA T P KKW N TE A E L Y Q*A VA TR R++IT
Sbjct: 401 SSRR*EFVKNQQHVAITAPVIKKWVNKTETTTTTA*ELLWSYVTQ*ATVATTRSRLQITI 222
Query: 312 NAGSSRAHWFFVCL*YLVC**TTFGEVQR*TICQNVYSISLCCHLTM 172
NAGSSRAHWF VCL*YLVC**TTFG+VQR +ICQ VYS S+CCHLT+
Sbjct: 221 NAGSSRAHWFLVCL*YLVC**TTFGDVQRLSICQKVYSTSICCHLTI 81
Score = 160 bits (344), Expect(2) = 1e-080
Identities = 75/115 (65%), Positives = 79/115 (68%)
Frame = -3 / -2
Query: 831 KYKLRKYLVGLNPISIISGDRMMTRPIGYRKNVVLSRNGRTSYPRKFR****EIATTKSR 652
KY KYL GLNP+ I GDR MT PIG RKNVV S+NG TSYPRK R* * E T KSR
Sbjct: 743 KYMFMKYLDGLNPLKIRIGDRTMTTPIG*RKNVVRSKNGSTSYPRKLR*W*YEAPTMKSR 564
Query: 651 LDNKAGKKPCATNRGDRKYCTTYRMTNAGKNELQ*TSNA*SHSTRCSTTWLLGSS 487
D+ G PCA GD+K CTT TN GKNELQ*TSN SHSTRCSTT L G S
Sbjct: 563 FDSSKGMNPCAIRSGDKK*CTT*SSTNIGKNELQ*TSNVYSHSTRCSTT*LFGVS 399
Score = 102 bits (217), Expect(2) = 1e-038
Identities = 48/113 (42%), Positives = 70/113 (61%)
Frame = -2 / -1
Query: 490 LSQVRICKEPAKCGQNYPSKQEMEKHNRSDC*SSM*GTLSICCTVS*CCKHEEKNQNNNK 311
L++VRIC++P C N EM + N +D M T+ I T+ C ++++ ++NK
Sbjct: 399 LAKVRICQKPTACSYNCSGD*EMGEQN*NDYDDGMRATMVIRDTIGYSCNNKKQATDHNK 220
Query: 310 CRIITGPLVLCLLVIFGVLIDYFW*STEMNHLPKCVFNIPLLPLDDAAEVKKK 152
R+IT PLVL L VI VLID F T++ HLP+ +FNI LLPL+D +V K+
Sbjct: 219 RRVITCPLVLSLFVILSVLIDNFRRCTKVKHLPESIFNIHLLPLNDTTKVLKE 61
Score = 80.8 bits (170), Expect(2) = 1e-038
Identities = 39/114 (34%), Positives = 69/114 (60%)
Frame = -2 / -1
Query: 838 LTEVQA*KVSCRIKPY*YHKWRQDDDETNRIQEECCXXXXXXXXXXXKVQVVIIRNCHHE 659
L EV ++S R++ * RQD+D ++ ++EECC +V+++++R+ HE
Sbjct: 750 LAEVHVHEIS*RVESA*DKNRRQDNDNSDWVEEECCSLQKWKHVIS*EVKIMVVRSPDHE 571
Query: 658 E*IR*QSWKEAMRDQ*RRQKILHHI*DDKRRKERVTMNVKCIEPLHALLNNMAV 497
+ IR*Q E++ Q R ++++ + K KERV +N+KCI+P +AL ++M V
Sbjct: 570 KQIR*Q*RDESVCYQER**EVMYDVEQHKHWKERVAVNIKCIQPFNALFHHMTV 409
>emb|BX820218.1|CNS0AA37 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS95ZC04 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1312
Score = 247 bits (533), Expect(2) = e-123
Identities = 94/115 (81%), Positives = 106/115 (92%)
Frame = +2 / +3
Query: 488 EEPNSHVVEQRVEWLYAFDVHCNSFFPAFVILYVVQYFLSPLLVAHGFFPALLSNLLFVV 667
E PNSHVVEQRVEWLY FDVHCNSFFP FV+LYVV YFLSPLL+AHGF P LLSNLLF+V
Sbjct: 501 ETPNSHVVEQRVEWLYTFDVHCNSFFPMFVLLYVVHYFLSPLLIAHGFIPLLLSNLLFMV 680
Query: 668 AISYYHYLNFLGYDVLPFLDRTTFFLYPIGLVIILSPLMILIGFNPTRYFLSLYF 832
SYYHYLNFLGYDVLPFL+RTTFFLYPIG+VI+LSP++IL GFNP+RYF+++YF
Sbjct: 681 GASYYHYLNFLGYDVLPFLERTTFFLYPIGVVIVLSPILILSGFNPSRYFMNMYF 845
Score = 217 bits (469), Expect(2) = e-123
Identities = 83/114 (72%), Positives = 93/114 (81%)
Frame = +2 / +3
Query: 152 FFFYLRRIVKWQQRDIEYTFWQMVHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVILIL 331
F Y RRIVKWQQ D+EYTFWQM++LCTSPKVVYQHTKYHKQTKNQWARDDPAF+VI L
Sbjct: 162 FLQYFRRIVKWQQMDVEYTFWQMLNLCTSPKVVYQHTKYHKQTKNQWARDDPAFIVICSL 341
Query: 332 FLVFATSAYCAAYGESASHAALTITSVVFLHFLFAGIVLATLCWFLTNSYLREE 493
LV AT AYC + S+SHA + + SV+F HFL G V+AT CWFLTNSYLREE
Sbjct: 342 LLVVATVAYCVTHDHSSSHAVVVVVSVLFTHFLITGAVIATCCWFLTNSYLREE 503
Score = 160 bits (344), Expect(2) = 2e-079
Identities = 75/115 (65%), Positives = 79/115 (68%)
Frame = -3 / -1
Query: 831 KYKLRKYLVGLNPISIISGDRMMTRPIGYRKNVVLSRNGRTSYPRKFR****EIATTKSR 652
KY KYL GLNP+ I GDR MT PIG RKNVV S+NG TSYPRK R* * E T KSR
Sbjct: 844 KYMFMKYLDGLNPLKIRIGDRTMTTPIG*RKNVVRSKNGSTSYPRKLR*W*YEAPTMKSR 665
Query: 651 LDNKAGKKPCATNRGDRKYCTTYRMTNAGKNELQ*TSNA*SHSTRCSTTWLLGSS 487
D+ G PCA GD+K CTT TN GKNELQ*TSN SHSTRCSTT L G S
Sbjct: 664 FDSSKGMNPCAIRSGDKK*CTT*SSTNIGKNELQ*TSNVYSHSTRCSTT*LFGVS 500
Score = 159 bits (341), Expect(2) = 2e-079
Identities = 71/107 (66%), Positives = 79/107 (73%)
Frame = -3 / -1
Query: 492 SSLK*EFVRNQQSVAKTIPANKKWRNTTEVIVRAACEALSPYAAQ*ADVANTRKRIRITT 313
SS +*EFV+NQQ VA T P KKW N TE A E L Q*A VA TR R++IT
Sbjct: 502 SSRR*EFVKNQQHVAITAPVIKKWVNKTETTTTTA*ELLWSCVTQ*ATVATTRSRLQITI 323
Query: 312 NAGSSRAHWFFVCL*YLVC**TTFGEVQR*TICQNVYSISLCCHLTM 172
NAGSSRAHWF VCL*YLVC**TTFG+VQR +ICQ VYS S+CCHLT+
Sbjct: 322 NAGSSRAHWFLVCL*YLVC**TTFGDVQRLSICQKVYSTSICCHLTI 182
Score = 100 bits (214), Expect(2) = 3e-038
Identities = 47/113 (41%), Positives = 70/113 (61%)
Frame = -2 / -3
Query: 490 LSQVRICKEPAKCGQNYPSKQEMEKHNRSDC*SSM*GTLSICCTVS*CCKHEEKNQNNNK 311
L++VRIC++P C N EM + N +D M T+ + T+ C ++++ ++NK
Sbjct: 500 LAKVRICQKPTACSYNCSGD*EMGEQN*NDYDDGMRATMVMRDTIGYSCNNKKQATDHNK 321
Query: 310 CRIITGPLVLCLLVIFGVLIDYFW*STEMNHLPKCVFNIPLLPLDDAAEVKKK 152
R+IT PLVL L VI VLID F T++ HLP+ +FNI LLPL+D +V K+
Sbjct: 320 RRVITCPLVLSLFVILSVLIDNFRRCTKVKHLPESIFNIHLLPLNDTTKVLKE 162
Score = 80.8 bits (170), Expect(2) = 3e-038
Identities = 39/114 (34%), Positives = 69/114 (60%)
Frame = -2 / -3
Query: 838 LTEVQA*KVSCRIKPY*YHKWRQDDDETNRIQEECCXXXXXXXXXXXKVQVVIIRNCHHE 659
L EV ++S R++ * RQD+D ++ ++EECC +V+++++R+ HE
Sbjct: 851 LAEVHVHEIS*RVESA*DKNRRQDNDNSDWVEEECCSLQKWKHVIS*EVKIMVVRSPDHE 672
Query: 658 E*IR*QSWKEAMRDQ*RRQKILHHI*DDKRRKERVTMNVKCIEPLHALLNNMAV 497
+ IR*Q E++ Q R ++++ + K KERV +N+KCI+P +AL ++M V
Sbjct: 671 KQIR*Q*RDESVCYQER**EVMYDVEQHKHWKERVAVNIKCIQPFNALFHHMTV 510
>emb|AX505576.1| Sequence 271 from Patent WO0216655
Length = 972
Score = 220 bits (474), Expect(3) = e-118
Identities = 84/114 (73%), Positives = 93/114 (81%)
Frame = +2 / +1
Query: 152 FFFYLRRIVKWQQRDIEYTFWQMVHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVILIL 331
F Y RRIVKWQQ D+EYTFWQM++LCTSPKVVYQHTKYHKQTKNQWARDDPAF+VI L
Sbjct: 61 FLQYFRRIVKWQQMDVEYTFWQMLNLCTSPKVVYQHTKYHKQTKNQWARDDPAFIVICSL 240
Query: 332 FLVFATSAYCAAYGESASHAALTITSVVFLHFLFAGIVLATLCWFLTNSYLREE 493
LV AT AYC Y S+SHA + + SV+F HFL G V+AT CWFLTNSYLREE
Sbjct: 241 LLVVATVAYCVTYDHSSSHAVVVVVSVLFTHFLITGAVIATCCWFLTNSYLREE 402
Score = 215 bits (463), Expect(3) = e-118
Identities = 83/98 (84%), Positives = 90/98 (91%)
Frame = +2 / +1
Query: 488 EEPNSHVVEQRVEWLYAFDVHCNSFFPAFVILYVVQYFLSPLLVAHGFFPALLSNLLFVV 667
E PNSHVVEQRVEWLY FDVHCNSFFP FV+LYVV YFLSPLL+AHGF P LLSNLLF+V
Sbjct: 400 ETPNSHVVEQRVEWLYTFDVHCNSFFPMFVLLYVVHYFLSPLLIAHGFIPLLLSNLLFMV 579
Query: 668 AISYYHYLNFLGYDVLPFLDRTTFFLYPIGLVIILSPL 781
SYYHYLNFLGYDVLPFL+RTTFFLYPIG+VI+LSP+
Sbjct: 580 GASYYHYLNFLGYDVLPFLERTTFFLYPIGVVIVLSPI 693
Score = 163 bits (350), Expect(3) = 6e-077
Identities = 72/107 (67%), Positives = 80/107 (74%)
Frame = -3 / -2
Query: 492 SSLK*EFVRNQQSVAKTIPANKKWRNTTEVIVRAACEALSPYAAQ*ADVANTRKRIRITT 313
SS +*EFV+NQQ VA T P KKW N TE A E L Y Q*A VA TR R++IT
Sbjct: 401 SSRR*EFVKNQQHVAITAPVIKKWVNKTETTTTTA*ELLWSYVTQ*ATVATTRSRLQITI 222
Query: 312 NAGSSRAHWFFVCL*YLVC**TTFGEVQR*TICQNVYSISLCCHLTM 172
NAGSSRAHWF VCL*YLVC**TTFG+VQR +ICQ VYS S+CCHLT+
Sbjct: 221 NAGSSRAHWFLVCL*YLVC**TTFGDVQRLSICQKVYSTSICCHLTI 81
Score = 140 bits (300), Expect(3) = 6e-077
Identities = 66/102 (64%), Positives = 71/102 (69%)
Frame = -3 / -2
Query: 792 ISIISGDRMMTRPIGYRKNVVLSRNGRTSYPRKFR****EIATTKSRLDNKAGKKPCATN 613
+S+ GDR MT PIG RKNVV S+NG TSYPRK R* * E T KSR D+ G PCA
Sbjct: 704 LSLRIGDRTMTTPIG*RKNVVRSKNGSTSYPRKLR*W*YEAPTMKSRFDSSKGMNPCAIR 525
Query: 612 RGDRKYCTTYRMTNAGKNELQ*TSNA*SHSTRCSTTWLLGSS 487
GD+K CTT TN GKNELQ*TSN SHSTRCSTT L G S
Sbjct: 524 SGDKK*CTT*SSTNIGKNELQ*TSNVYSHSTRCSTT*LFGVS 399
Score = 102 bits (217), Expect(2) = 8e-037
Identities = 48/113 (42%), Positives = 70/113 (61%)
Frame = -2 / -1
Query: 490 LSQVRICKEPAKCGQNYPSKQEMEKHNRSDC*SSM*GTLSICCTVS*CCKHEEKNQNNNK 311
L++VRIC++P C N EM + N +D M T+ I T+ C ++++ ++NK
Sbjct: 399 LAKVRICQKPTACSYNCSGD*EMGEQN*NDYDDGMRATMVIRDTIGYSCNNKKQATDHNK 220
Query: 310 CRIITGPLVLCLLVIFGVLIDYFW*STEMNHLPKCVFNIPLLPLDDAAEVKKK 152
R+IT PLVL L VI VLID F T++ HLP+ +FNI LLPL+D +V K+
Sbjct: 219 RRVITCPLVLSLFVILSVLIDNFRRCTKVKHLPESIFNIHLLPLNDTTKVLKE 61
Score = 74.8 bits (157), Expect(2) = 8e-037
Identities = 33/93 (35%), Positives = 59/93 (63%)
Frame = -2 / -1
Query: 775 RQDDDETNRIQEECCXXXXXXXXXXXKVQVVIIRNCHHEE*IR*QSWKEAMRDQ*RRQKI 596
RQD+D ++ ++EECC +V+++++R+ HE+ IR*Q E++ Q R ++
Sbjct: 687 RQDNDNSDWVEEECCSLQKWKHVIS*EVKIMVVRSPDHEKQIR*Q*RDESVCYQER**EV 508
Query: 595 LHHI*DDKRRKERVTMNVKCIEPLHALLNNMAV 497
++ + K KERV +N+KCI+P +AL ++M V
Sbjct: 507 MYDVEQHKHWKERVAVNIKCIQPFNALFHHMTV 409
Score = 35.0 bits (70), Expect(3) = e-118
Identities = 11/17 (64%), Positives = 16/17 (94%)
Frame = +2 / +2
Query: 782 MILIGFNPTRYFLSLYF 832
+IL GFNP+RYF+++YF
Sbjct: 746 LILSGFNPSRYFMNMYF 796
Score = 26.7 bits (52), Expect(3) = 6e-077
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -3 / -1
Query: 831 KYKLRKYLVGLNPISI 784
KY KYL GLNP+ I
Sbjct: 795 KYMFMKYLDGLNPLKI 748
>gb|BE037686.1|BE037686 AA02G05 AA Arabidopsis thaliana cDNA 5', mRNA sequence
Length = 724
Score = 220 bits (474), Expect(2) = e-102
Identities = 84/114 (73%), Positives = 93/114 (81%)
Frame = +2 / +1
Query: 152 FFFYLRRIVKWQQRDIEYTFWQMVHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVILIL 331
F Y RRIVKWQQ D+EYTFWQM++LCTSPKVVYQHTKYHKQTKNQWARDDPAF+VI L
Sbjct: 148 FLQYFRRIVKWQQMDVEYTFWQMLNLCTSPKVVYQHTKYHKQTKNQWARDDPAFIVICSL 327
Query: 332 FLVFATSAYCAAYGESASHAALTITSVVFLHFLFAGIVLATLCWFLTNSYLREE 493
LV AT AYC Y S+SHA + + SV+F HFL G V+AT CWFLTNSYLREE
Sbjct: 328 LLVVATVAYCVTYDHSSSHAVVVVVSVLFTHFLITGAVIATCCWFLTNSYLREE 489
Score = 175 bits (377), Expect(2) = e-102
Identities = 68/79 (86%), Positives = 71/79 (89%)
Frame = +2 / +1
Query: 488 EEPNSHVVEQRVEWLYAFDVHCNSFFPAFVILYVVQYFLSPLLVAHGFFPALLSNLLFVV 667
E PNSHVVEQRVEWLY FDVHCNSFFP FV+LYVV YFLSPLL+AHGF P LLSNLLF+V
Sbjct: 487 ETPNSHVVEQRVEWLYTFDVHCNSFFPMFVLLYVVHYFLSPLLIAHGFIPLLLSNLLFMV 666
Query: 668 AISYYHYLNFLGYDVLPFL 724
SYYHYLNFLGYDVLPFL
Sbjct: 667 GASYYHYLNFLGYDVLPFL 723
Score = 163 bits (350), Expect(2) = 2e-065
Identities = 72/107 (67%), Positives = 80/107 (74%)
Frame = -3 / -3
Query: 492 SSLK*EFVRNQQSVAKTIPANKKWRNTTEVIVRAACEALSPYAAQ*ADVANTRKRIRITT 313
SS +*EFV+NQQ VA T P KKW N TE A E L Y Q*A VA TR R++IT
Sbjct: 488 SSRR*EFVKNQQHVAITAPVIKKWVNKTETTTTTA*ELLWSYVTQ*ATVATTRSRLQITI 309
Query: 312 NAGSSRAHWFFVCL*YLVC**TTFGEVQR*TICQNVYSISLCCHLTM 172
NAGSSRAHWF VCL*YLVC**TTFG+VQR +ICQ VYS S+CCHLT+
Sbjct: 308 NAGSSRAHWFLVCL*YLVC**TTFGDVQRLSICQKVYSTSICCHLTI 168
Score = 109 bits (233), Expect(2) = 2e-065
Identities = 51/79 (64%), Positives = 54/79 (68%)
Frame = -3 / -3
Query: 723 RNGRTSYPRKFR****EIATTKSRLDNKAGKKPCATNRGDRKYCTTYRMTNAGKNELQ*T 544
+NG TSYPRK R* * E T KSR D+ G PCA GD+K CTT TN GKNELQ*T
Sbjct: 722 KNGSTSYPRKLR*W*YEAPTMKSRFDSSKGMNPCAIRSGDKK*CTT*SSTNIGKNELQ*T 543
Query: 543 SNA*SHSTRCSTTWLLGSS 487
SN SHSTRCSTT L G S
Sbjct: 542 SNVYSHSTRCSTT*LFGVS 486
Score = 102 bits (217), Expect(2) = 3e-031
Identities = 48/113 (42%), Positives = 70/113 (61%)
Frame = -2 / -2
Query: 490 LSQVRICKEPAKCGQNYPSKQEMEKHNRSDC*SSM*GTLSICCTVS*CCKHEEKNQNNNK 311
L++VRIC++P C N EM + N +D M T+ I T+ C ++++ ++NK
Sbjct: 486 LAKVRICQKPTACSYNCSGD*EMGEQN*NDYDDGMRATMVIRDTIGYSCNNKKQATDHNK 307
Query: 310 CRIITGPLVLCLLVIFGVLIDYFW*STEMNHLPKCVFNIPLLPLDDAAEVKKK 152
R+IT PLVL L VI VLID F T++ HLP+ +FNI LLPL+D +V K+
Sbjct: 306 RRVITCPLVLSLFVILSVLIDNFRRCTKVKHLPESIFNIHLLPLNDTTKVLKE 148
Score = 56.1 bits (116), Expect(2) = 3e-031
Identities = 25/66 (37%), Positives = 45/66 (68%)
Frame = -2 / -2
Query: 694 VQVVIIRNCHHEE*IR*QSWKEAMRDQ*RRQKILHHI*DDKRRKERVTMNVKCIEPLHAL 515
V+++++R+ HE+ IR*Q E++ Q R ++++ + K KERV +N+KCI+P +AL
Sbjct: 693 VKIMVVRSPDHEKQIR*Q*RDESVCYQER**EVMYDVEQHKHWKERVAVNIKCIQPFNAL 514
Query: 514 LNNMAV 497
++M V
Sbjct: 513 FHHMTV 496
>gb|AV821307.1|AV821307 AV821307 RAFL3 Arabidopsis thaliana cDNA clone RAFL03-07-C10 5',
mRNA sequence
Length = 724
Score = 220 bits (474), Expect(2) = e-101
Identities = 84/114 (73%), Positives = 93/114 (81%)
Frame = +2 / +3
Query: 152 FFFYLRRIVKWQQRDIEYTFWQMVHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVILIL 331
F Y RRIVKWQQ D+EYTFWQM++LCTSPKVVYQHTKYHKQTKNQWARDDPAF+VI L
Sbjct: 141 FLQYFRRIVKWQQMDVEYTFWQMLNLCTSPKVVYQHTKYHKQTKNQWARDDPAFIVICSL 320
Query: 332 FLVFATSAYCAAYGESASHAALTITSVVFLHFLFAGIVLATLCWFLTNSYLREE 493
LV AT AYC Y S+SHA + + SV+F HFL G V+AT CWFLTNSYLREE
Sbjct: 321 LLVVATVAYCVTYDHSSSHAVVVVVSVLFTHFLITGAVIATCCWFLTNSYLREE 482
Score = 171 bits (368), Expect(2) = e-101
Identities = 67/79 (84%), Positives = 70/79 (88%)
Frame = +2 / +3
Query: 488 EEPNSHVVEQRVEWLYAFDVHCNSFFPAFVILYVVQYFLSPLLVAHGFFPALLSNLLFVV 667
E PNSHVVEQRVEWLY FDVHCNSFFP FV+LYVV YFLSPLL+AHGF P LLSNLLF+V
Sbjct: 480 ETPNSHVVEQRVEWLYTFDVHCNSFFPMFVLLYVVHYFLSPLLIAHGFIPLLLSNLLFMV 659
Query: 668 AISYYHYLNFLGYDVLPFL 724
SYYHYLNFLGYDVL FL
Sbjct: 660 GASYYHYLNFLGYDVLXFL 716
Score = 163 bits (350), Expect(2) = 2e-064
Identities = 72/107 (67%), Positives = 80/107 (74%)
Frame = -3 / -1
Query: 492 SSLK*EFVRNQQSVAKTIPANKKWRNTTEVIVRAACEALSPYAAQ*ADVANTRKRIRITT 313
SS +*EFV+NQQ VA T P KKW N TE A E L Y Q*A VA TR R++IT
Sbjct: 481 SSRR*EFVKNQQHVAITAPVIKKWVNKTETTTTTA*ELLWSYVTQ*ATVATTRSRLQITI 302
Query: 312 NAGSSRAHWFFVCL*YLVC**TTFGEVQR*TICQNVYSISLCCHLTM 172
NAGSSRAHWF VCL*YLVC**TTFG+VQR +ICQ VYS S+CCHLT+
Sbjct: 301 NAGSSRAHWFLVCL*YLVC**TTFGDVQRLSICQKVYSTSICCHLTI 161
Score = 106 bits (226), Expect(2) = 2e-064
Identities = 50/79 (63%), Positives = 53/79 (67%)
Frame = -3 / -1
Query: 723 RNGRTSYPRKFR****EIATTKSRLDNKAGKKPCATNRGDRKYCTTYRMTNAGKNELQ*T 544
+N TSYPRK R* * E T KSR D+ G PCA GD+K CTT TN GKNELQ*T
Sbjct: 715 KNXSTSYPRKLR*W*YEAPTMKSRFDSSKGMNPCAIRSGDKK*CTT*SSTNIGKNELQ*T 536
Query: 543 SNA*SHSTRCSTTWLLGSS 487
SN SHSTRCSTT L G S
Sbjct: 535 SNVXSHSTRCSTT*LFGVS 479
Score = 102 bits (217), Expect(2) = 8e-031
Identities = 48/113 (42%), Positives = 70/113 (61%)
Frame = -2 / -3
Query: 490 LSQVRICKEPAKCGQNYPSKQEMEKHNRSDC*SSM*GTLSICCTVS*CCKHEEKNQNNNK 311
L++VRIC++P C N EM + N +D M T+ I T+ C ++++ ++NK
Sbjct: 479 LAKVRICQKPTACSYNCSGD*EMGEQN*NDYDDGMRATMVIRDTIGYSCNNKKQATDHNK 300
Query: 310 CRIITGPLVLCLLVIFGVLIDYFW*STEMNHLPKCVFNIPLLPLDDAAEVKKK 152
R+IT PLVL L VI VLID F T++ HLP+ +FNI LLPL+D +V K+
Sbjct: 299 RRVITCPLVLSLFVILSVLIDNFRRCTKVKHLPESIFNIHLLPLNDTTKVLKE 141
Score = 54.7 bits (113), Expect(2) = 8e-031
Identities = 25/66 (37%), Positives = 44/66 (66%)
Frame = -2 / -3
Query: 694 VQVVIIRNCHHEE*IR*QSWKEAMRDQ*RRQKILHHI*DDKRRKERVTMNVKCIEPLHAL 515
V+++++R+ HE+ IR*Q E++ Q R ++++ + K KERV +N+KCI P +AL
Sbjct: 686 VKIMVVRSPDHEKQIR*Q*RDESVCYQER**EVMYDVEQHKHWKERVAVNIKCIXPFNAL 507
Query: 514 LNNMAV 497
++M V
Sbjct: 506 FHHMTV 489
>gb|AY084886.1| Arabidopsis thaliana clone 120231 mRNA, complete sequence
Length = 1236
Score = 248 bits (535), Expect(2) = 4e-074
Identities = 99/178 (55%), Positives = 126/178 (70%)
Frame = +2 / +1
Query: 299 DDPAFVVILILFLVFATSAYCAAYGESASHAALTITSVVFLHFLFAGIVLATLCWFLTNS 478
D V+ +L +V + S+ + ++ ++ + ++ + +
Sbjct: 289 DPAFIVICSLLLVVATVAYCVTYDHSSSHAVVVVVSVLLTHFLITGAVIATCCWFLTNSY 468
Query: 479 YLREEPNSHVVEQRVEWLYAFDVHCNSFFPAFVILYVVQYFLSPLLVAHGFFPALLSNLL 658
E PNSHVVEQRVEWLY FDVHCNSFFP FV+LYVV YFLSPLL+AHGF P LLSNLL
Sbjct: 469 LREETPNSHVVEQRVEWLYTFDVHCNSFFPMFVLLYVVHYFLSPLLIAHGFIPLLLSNLL 648
Query: 659 FVVAISYYHYLNFLGYDVLPFLDRTTFFLYPIGLVIILSPLMILIGFNPTRYFLSLYF 832
F+V SYYHYLNFLGYDVLPFL+RTTFFLYPIG+VI+LSP++IL GFNP+RYF+++YF
Sbjct: 649 FMVGASYYHYLNFLGYDVLPFLERTTFFLYPIGVVIVLSPILILSGFNPSRYFMNMYF 822
Score = 217 bits (468), Expect(2) = 1e-057
Identities = 83/114 (72%), Positives = 92/114 (80%)
Frame = +2 / +1
Query: 152 FFFYLRRIVKWQQRDIEYTFWQMVHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVILIL 331
F Y RRIVKWQQ D+EYTFWQM++LCTSPKVVYQHTKYHKQTKNQWARDDPAF+VI L
Sbjct: 139 FLQYFRRIVKWQQMDVEYTFWQMLNLCTSPKVVYQHTKYHKQTKNQWARDDPAFIVICSL 318
Query: 332 FLVFATSAYCAAYGESASHAALTITSVVFLHFLFAGIVLATLCWFLTNSYLREE 493
LV AT AYC Y S+SHA + + SV+ HFL G V+AT CWFLTNSYLREE
Sbjct: 319 LLVVATVAYCVTYDHSSSHAVVVVVSVLLTHFLITGAVIATCCWFLTNSYLREE 480
Score = 160 bits (345), Expect(2) = 6e-080
Identities = 71/107 (66%), Positives = 80/107 (74%)
Frame = -3 / -2
Query: 492 SSLK*EFVRNQQSVAKTIPANKKWRNTTEVIVRAACEALSPYAAQ*ADVANTRKRIRITT 313
SS +*EFV+NQQ VA T P KKW + TE A E L Y Q*A VA TR R++IT
Sbjct: 479 SSRR*EFVKNQQHVAITAPVIKKWVSKTETTTTTA*ELLWSYVTQ*ATVATTRSRLQITI 300
Query: 312 NAGSSRAHWFFVCL*YLVC**TTFGEVQR*TICQNVYSISLCCHLTM 172
NAGSSRAHWF VCL*YLVC**TTFG+VQR +ICQ VYS S+CCHLT+
Sbjct: 299 NAGSSRAHWFLVCL*YLVC**TTFGDVQRLSICQKVYSTSICCHLTI 159
Score = 160 bits (344), Expect(2) = 6e-080
Identities = 75/115 (65%), Positives = 79/115 (68%)
Frame = -3 / -2
Query: 831 KYKLRKYLVGLNPISIISGDRMMTRPIGYRKNVVLSRNGRTSYPRKFR****EIATTKSR 652
KY KYL GLNP+ I GDR MT PIG RKNVV S+NG TSYPRK R* * E T KSR
Sbjct: 821 KYMFMKYLDGLNPLKIRIGDRTMTTPIG*RKNVVRSKNGSTSYPRKLR*W*YEAPTMKSR 642
Query: 651 LDNKAGKKPCATNRGDRKYCTTYRMTNAGKNELQ*TSNA*SHSTRCSTTWLLGSS 487
D+ G PCA GD+K CTT TN GKNELQ*TSN SHSTRCSTT L G S
Sbjct: 641 FDSSKGMNPCAIRSGDKK*CTT*SSTNIGKNELQ*TSNVYSHSTRCSTT*LFGVS 477
Score = 102 bits (217), Expect(2) = 1e-038
Identities = 48/113 (42%), Positives = 70/113 (61%)
Frame = -2 / -1
Query: 490 LSQVRICKEPAKCGQNYPSKQEMEKHNRSDC*SSM*GTLSICCTVS*CCKHEEKNQNNNK 311
L++VRIC++P C N EM + N +D M T+ I T+ C ++++ ++NK
Sbjct: 477 LAKVRICQKPTACSYNCSGD*EMGEQN*NDYDDGMRATMVIRDTIGYSCNNKKQATDHNK 298
Query: 310 CRIITGPLVLCLLVIFGVLIDYFW*STEMNHLPKCVFNIPLLPLDDAAEVKKK 152
R+IT PLVL L VI VLID F T++ HLP+ +FNI LLPL+D +V K+
Sbjct: 297 RRVITCPLVLSLFVILSVLIDNFRRCTKVKHLPESIFNIHLLPLNDTTKVLKE 139
Score = 80.8 bits (170), Expect(2) = 1e-038
Identities = 39/114 (34%), Positives = 69/114 (60%)
Frame = -2 / -1
Query: 838 LTEVQA*KVSCRIKPY*YHKWRQDDDETNRIQEECCXXXXXXXXXXXKVQVVIIRNCHHE 659
L EV ++S R++ * RQD+D ++ ++EECC +V+++++R+ HE
Sbjct: 828 LAEVHVHEIS*RVESA*DKNRRQDNDNSDWVEEECCSLQKWKHVIS*EVKIMVVRSPDHE 649
Query: 658 E*IR*QSWKEAMRDQ*RRQKILHHI*DDKRRKERVTMNVKCIEPLHALLNNMAV 497
+ IR*Q E++ Q R ++++ + K KERV +N+KCI+P +AL ++M V
Sbjct: 648 KQIR*Q*RDESVCYQER**EVMYDVEQHKHWKERVAVNIKCIQPFNALFHHMTV 487
Score = 53.8 bits (111), Expect(2) = 4e-074
Identities = 25/49 (51%), Positives = 32/49 (65%)
Frame = +1 / +3
Query: 172 HRQVATKGY*IHILANGSSLYFTKSSLSAHQISQANKEPVGP**SCICC 318
+R VA G *I+ LAN LY ++S LS H +SQ N EP+G ** C+ C
Sbjct: 159 YR*VAANGC*IYFLANA*PLYISESCLSTH*VSQTN*EPMGT**PCVYC 305
Score = 29.5 bits (58), Expect(2) = 1e-057
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3 / +2
Query: 498 TAMLLSNAWSGSMHLTFIVTRSF 566
T M +NA +G +HL F TRSF
Sbjct: 488 TVMWWNNALNGCIHLMFTATRSF 556
>gb|AV781680.1|AV781680 AV781680 RAFL3 Arabidopsis thaliana cDNA clone RAFL03-07-C10 3',
mRNA sequence
Length = 707
Score = 247 bits (533), Expect(2) = 1e-064
Identities = 94/115 (81%), Positives = 106/115 (92%)
Frame = +2 / -3
Query: 488 EEPNSHVVEQRVEWLYAFDVHCNSFFPAFVILYVVQYFLSPLLVAHGFFPALLSNLLFVV 667
E PNSHVVEQRVEWLY FDVHCNSFFP FV+LYVV YFLSPLL+AHGF P LLSNLLF+V
Sbjct: 678 ETPNSHVVEQRVEWLYTFDVHCNSFFPMFVLLYVVHYFLSPLLIAHGFIPLLLSNLLFMV 499
Query: 668 AISYYHYLNFLGYDVLPFLDRTTFFLYPIGLVIILSPLMILIGFNPTRYFLSLYF 832
SYYHYLNFLGYDVLPFL+RTTFFLYPIG+VI+LSP++IL GFNP+RYF+++YF
Sbjct: 498 GASYYHYLNFLGYDVLPFLERTTFFLYPIGVVIVLSPILILSGFNPSRYFMNMYF 334
Score = 160 bits (344), Expect = 8e-038
Identities = 75/115 (65%), Positives = 79/115 (68%)
Frame = -3 / +2
Query: 831 KYKLRKYLVGLNPISIISGDRMMTRPIGYRKNVVLSRNGRTSYPRKFR****EIATTKSR 652
KY KYL GLNP+ I GDR MT PIG RKNVV S+NG TSYPRK R* * E T KSR
Sbjct: 335 KYMFMKYLDGLNPLKIRIGDRTMTTPIG*RKNVVRSKNGSTSYPRKLR*W*YEAPTMKSR 514
Query: 651 LDNKAGKKPCATNRGDRKYCTTYRMTNAGKNELQ*TSNA*SHSTRCSTTWLLGSS 487
D+ G PCA GD+K CTT TN GKNELQ*TSN SHSTRCSTT L G S
Sbjct: 515 FDSSKGMNPCAIRSGDKK*CTT*SSTNIGKNELQ*TSNVYSHSTRCSTT*LFGVS 679
Score = 23.5 bits (45), Expect(2) = 1e-064
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / -3
Query: 467 LTNSYLREE 493
LTNSYLREE
Sbjct: 702 LTNSYLREE 676
>gb|AC006298.13| Arabidopsis thaliana chromosome 2 clone F15A23 map mi398, complete
sequence
Length = 57564
Score = 87.7 bits (185), Expect(8) = 3e-064
Identities = 34/41 (82%), Positives = 36/41 (87%)
Frame = +2 / +1
Query: 587 VVQYFLSPLLVAHGFFPALLSNLLFVVAISYYHYLNFLGYD 709
VV YFLSPLL+AHGF P LLSNLLF+V SYYHYLNFLGYD
Sbjct: 3973 VVHYFLSPLLIAHGFIPLLLSNLLFMVGASYYHYLNFLGYD 4095
Score = 58.8 bits (122), Expect(8) = 3e-064
Identities = 23/37 (62%), Positives = 27/37 (72%)
Frame = +2 / +1
Query: 251 YQHTKYHKQTKNQWARDDPAFVVILILFLVFATSAYC 361
Y + + +TKNQWARDDPAF+VI L LV AT AYC
Sbjct: 2860 YSYFFFLSETKNQWARDDPAFIVICSLLLVVATVAYC 2970
Score = 57.4 bits (119), Expect(8) = 3e-064
Identities = 19/25 (76%), Positives = 24/25 (96%)
Frame = +2 / +3
Query: 176 VKWQQRDIEYTFWQMVHLCTSPKVV 250
++WQQ D+EYTFWQM++LCTSPKVV
Sbjct: 2064 LQWQQMDVEYTFWQMLNLCTSPKVV 2138
Score = 54.2 bits (112), Expect(7) = 1e-029
Identities = 22/31 (70%), Positives = 24/31 (77%)
Frame = -3 / -2
Query: 369 YAAQ*ADVANTRKRIRITTNAGSSRAHWFFV 277
Y Q*A VA TR R++IT NAGSSRAHWF V
Sbjct: 2978 YVTQ*ATVATTRSRLQITINAGSSRAHWFLV 2886
Score = 54.2 bits (112), Expect(8) = 3e-064
Identities = 20/26 (76%), Positives = 25/26 (96%)
Frame = +2 / +2
Query: 704 YDVLPFLDRTTFFLYPIGLVIILSPL 781
+ VLPFL+RTTFFLYPIG+VI+LSP+
Sbjct: 4184 HTVLPFLERTTFFLYPIGVVIVLSPI 4261
Score = 53.8 bits (111), Expect(7) = 1e-029
Identities = 24/41 (58%), Positives = 26/41 (63%)
Frame = -3 / -2
Query: 708 SYPRKFR****EIATTKSRLDNKAGKKPCATNRGDRKYCTT 586
SYPRK R* * E T KSR D+ G PCA GD+K CTT
Sbjct: 4094 SYPRKLR*W*YEAPTMKSRFDSSKGMNPCAIRSGDKK*CTT 3972
Score = 49.6 bits (102), Expect(8) = 3e-064
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +2 / +1
Query: 368 YGESASHAALTITSVVFLHFLFAGIVLATLCW 463
Y S+SHA + + SV+F HFL G V+AT CW
Sbjct: 3079 YDHSSSHAVVVVVSVLFTHFLITGAVIATCCW 3174
Score = 48.3 bits (99), Expect(7) = 1e-029
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = -3 / -3
Query: 249 TTFGEVQR*TICQNVYSISLCCH 181
TTFG+VQR +ICQ VYS S+CCH
Sbjct: 2137 TTFGDVQRLSICQKVYSTSICCH 2069
Score = 46.4 bits (95), Expect(8) = 3e-064
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +2 / +1
Query: 530 LYAFDVHCNSFFPAFVILY 586
LY FDVHCNSFFP FV+LY
Sbjct: 3811 LYTFDVHCNSFFPMFVLLY 3867
Score = 41.8 bits (85), Expect(7) = 1e-029
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = -3 / -1
Query: 792 ISIISGDRMMTRPIGYRKNVVLSRNGRT 709
+S+ GDR MT PIG RKNVV S+NG T
Sbjct: 4272 LSLRIGDRTMTTPIG*RKNVVRSKNGST 4189
Score = 35.9 bits (72), Expect(8) = 3e-064
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +2 / +2
Query: 488 EEPNSHVVEQRVEW 529
E PNSHVVEQRVEW
Sbjct: 3569 ETPNSHVVEQRVEW 3610
Score = 34.5 bits (69), Expect(8) = 3e-064
Identities = 11/17 (64%), Positives = 16/17 (94%)
Frame = +2 / +1
Query: 782 MILIGFNPTRYFLSLYF 832
+IL GFNP+RYF+++YF
Sbjct: 4351 VILSGFNPSRYFMNMYF 4401
Score = 29.5 bits (58), Expect(7) = 1e-029
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2 / -1
Query: 574 KRRKERVTMNVKCIEP 527
K KERV +N+KCI+P
Sbjct: 3855 KHWKERVAVNIKCIQP 3808
Score = 27.2 bits (53), Expect(7) = 1e-029
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -3 / -1
Query: 528 HSTRCSTTWLLGSS 487
HSTRCSTT L G S
Sbjct: 3609 HSTRCSTT*LFGVS 3568
Score = 26.7 bits (52), Expect(7) = 1e-029
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -3 / -2
Query: 831 KYKLRKYLVGLNPISI 784
KY KYL GLNP+ I
Sbjct: 4400 KYMFMKYLDGLNPLKI 4353
>gb|AV441458.1|AV441458 AV441458 Arabidopsis thaliana above-ground organ two to six-week
old Arabidopsis thaliana cDNA clone APZ57h03_f 3', mRNA
sequence
Length = 550
Score = 212 bits (457), Expect = 2e-053
Identities = 80/100 (80%), Positives = 92/100 (92%)
Frame = +2 / -1
Query: 533 YAFDVHCNSFFPAFVILYVVQYFLSPLLVAHGFFPALLSNLLFVVAISYYHYLNFLGYDV 712
Y FDVHCNSFFP FV+LYVV YFLSPLL+AHGF P LLSNLLF+V SYYHYLNFLGYDV
Sbjct: 550 YTFDVHCNSFFPMFVLLYVVHYFLSPLLIAHGFIPLLLSNLLFMVGASYYHYLNFLGYDV 371
Query: 713 LPFLDRTTFFLYPIGLVIILSPLMILIGFNPTRYFLSLYF 832
LPFL+RTTFFLYPIG+VI+LSP++IL GFNP+RYF+++YF
Sbjct: 370 LPFLERTTFFLYPIGVVIVLSPILILSGFNPSRYFMNMYF 251
Score = 136 bits (291), Expect = 2e-030
Identities = 63/98 (64%), Positives = 67/98 (68%)
Frame = -3 / +3
Query: 831 KYKLRKYLVGLNPISIISGDRMMTRPIGYRKNVVLSRNGRTSYPRKFR****EIATTKSR 652
KY KYL GLNP+ I GDR MT PIG RKNVV S+NG TSYPRK R* * E T KSR
Sbjct: 252 KYMFMKYLDGLNPLKIRIGDRTMTTPIG*RKNVVRSKNGSTSYPRKLR*W*YEAPTMKSR 431
Query: 651 LDNKAGKKPCATNRGDRKYCTTYRMTNAGKNELQ*TSN 538
D+ G PCA GD+K CTT TN GKNELQ*TSN
Sbjct: 432 FDSSKGMNPCAIRSGDKK*CTT*SSTNIGKNELQ*TSN 545
>gb|AA041159.1|AA041159 24425 CD4-13 Arabidopsis thaliana cDNA clone E2D12T7, mRNA sequence
Length = 604
Score = 203 bits (438), Expect = 9e-051
Identities = 77/107 (71%), Positives = 86/107 (80%)
Frame = +2 / +3
Query: 152 FFFYLRRIVKWQQRDIEYTFWQMVHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVILIL 331
F Y RRIVKWQQ D+EYTFWQM++LCTSPKVVYQHTKYHKQTKNQWARDDPAF+VI L
Sbjct: 15 FLQYFRRIVKWQQMDVEYTFWQMLNLCTSPKVVYQHTKYHKQTKNQWARDDPAFIVICSL 194
Query: 332 FLVFATSAYCAAYGESASHAALTITSVVFLHFLFAGIVLATLCWFLT 472
LV AT AYC Y S+SHA + + SV+F HFL G V+AT CWFLT
Sbjct: 195 LLVVATVAYCVTYDHSSSHAVVVVVSVLFXHFLITGAVIATCCWFLT 335
Score = 157 bits (338), Expect = 5e-037
Identities = 68/101 (67%), Positives = 75/101 (74%)
Frame = -3 / -1
Query: 474 FVRNQQSVAKTIPANKKWRNTTEVIVRAACEALSPYAAQ*ADVANTRKRIRITTNAGSSR 295
FV+NQQ VA T P KKW N TE A E L Y Q*A VA TR R++IT NAGSSR
Sbjct: 337 FVKNQQHVAITAPVIKKWXNKTETTTTTA*ELLWSYVTQ*ATVATTRSRLQITINAGSSR 158
Query: 294 AHWFFVCL*YLVC**TTFGEVQR*TICQNVYSISLCCHLTM 172
AHWF VCL*YLVC**TTFG+VQR +ICQ VYS S+CCHLT+
Sbjct: 157 AHWFLVCL*YLVC**TTFGDVQRLSICQKVYSTSICCHLTI 35
>gb|T22013.1|T22013 4021 Lambda-PRL2 Arabidopsis thaliana cDNA clone 104P20T7, mRNA
sequence
Length = 524
Score = 198 bits (427), Expect = 3e-049
Identities = 75/95 (78%), Positives = 87/95 (91%)
Frame = +2 / +1
Query: 548 HCNSFFPAFVILYVVQYFLSPLLVAHGFFPALLSNLLFVVAISYYHYLNFLGYDVLPFLD 727
HCNSFFP FV+LYVV YFLSPLL+AHGF P LLSNLL +V SYYHYLNFLGYDVLPFL+
Sbjct: 1 HCNSFFPMFVLLYVVHYFLSPLLIAHGFIPLLLSNLLXMVGASYYHYLNFLGYDVLPFLE 180
Query: 728 RTTFFLYPIGLVIILSPLMILIGFNPTRYFLSLYF 832
RTTFFLYPIG+VI+LSP++IL GFNP+RYF+++YF
Sbjct: 181 RTTFFLYPIGVVIVLSPILILSGFNPSRYFMNMYF 285
Score = 129 bits (276), Expect = 2e-028
Identities = 59/94 (62%), Positives = 63/94 (67%)
Frame = -3 / -1
Query: 831 KYKLRKYLVGLNPISIISGDRMMTRPIGYRKNVVLSRNGRTSYPRKFR****EIATTKSR 652
KY KYL GLNP+ I GDR MT PIG RKNVV S+NG TSYPRK R* * E T KSR
Sbjct: 284 KYMFMKYLDGLNPLKIRIGDRTMTTPIG*RKNVVRSKNGSTSYPRKLR*W*YEAPTXKSR 105
Query: 651 LDNKAGKKPCATNRGDRKYCTTYRMTNAGKNELQ 550
D+ G PCA GD+K CTT TN GKNELQ
Sbjct: 104 FDSSKGMNPCAIRSGDKK*CTT*SXTNIGKNELQ 3
>gb|N38189.1|N38189 19416 Lambda-PRL2 Arabidopsis thaliana cDNA clone 220K21T7, mRNA
sequence
Length = 501
Score = 173 bits (372), Expect = 1e-041
Identities = 66/90 (73%), Positives = 74/90 (82%)
Frame = +2 / +2
Query: 161 YLRRIVKWQQRDIEYTFWQMVHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVILILFLV 340
Y RRIVKWQQ D+EYTFWQM++LCTSPKVVYQHTKYHKQTKNQWAR DPAF+VI L LV
Sbjct: 116 YFRRIVKWQQMDVEYTFWQMLNLCTSPKVVYQHTKYHKQTKNQWARXDPAFIVICSLLLV 295
Query: 341 FATSAYCAAYGESASHAALTITSVVFLHFL 430
AT AYC Y S+SHA + + SV+F HFL
Sbjct: 296 VATVAYCVTYDHSSSHAVVVVGSVLFTHFL 385
Score = 134 bits (287), Expect = 6e-030
Identities = 57/86 (66%), Positives = 64/86 (74%)
Frame = -3 / -1
Query: 429 KKWRNTTEVIVRAACEALSPYAAQ*ADVANTRKRIRITTNAGSSRAHWFFVCL*YLVC** 250
+KW N TE A E L Y Q*A VA TR R++IT NAGS RAHWF VCL*YLVC**
Sbjct: 384 RKWVNKTEPTTTTA*ELLWSYVTQ*ATVATTRSRLQITINAGSXRAHWFLVCL*YLVC** 205
Query: 249 TTFGEVQR*TICQNVYSISLCCHLTM 172
TTFG+VQR +ICQ VYS S+CCHLT+
Sbjct: 204 TTFGDVQRLSICQKVYSTSICCHLTI 127
>gb|AV561346.1|AV561346 AV561346 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ149g12F 3', mRNA sequence
Length = 490
Score = 165 bits (354), Expect = 3e-039
Identities = 63/81 (77%), Positives = 74/81 (91%)
Frame = +2 / -1
Query: 590 VQYFLSPLLVAHGFFPALLSNLLFVVAISYYHYLNFLGYDVLPFLDRTTFFLYPIGLVII 769
V YFLSPLL+AH F P LLSNLLF+V SYYHYLNFLGYDVLPFL+RTTFFLYPIG+VI+
Sbjct: 490 VHYFLSPLLIAHEFIPLLLSNLLFMVGASYYHYLNFLGYDVLPFLERTTFFLYPIGVVIV 311
Query: 770 LSPLMILIGFNPTRYFLSLYF 832
LSP++IL GFNP+RYF+++YF
Sbjct: 310 LSPILILSGFNPSRYFMNMYF 248
Score = 104 bits (222), Expect = 5e-021
Identities = 48/80 (60%), Positives = 52/80 (65%)
Frame = -3 / +3
Query: 831 KYKLRKYLVGLNPISIISGDRMMTRPIGYRKNVVLSRNGRTSYPRKFR****EIATTKSR 652
KY KYL GLNP+ I GDR MT PIG RKNVV S+NG TSYPRK R* * E T KSR
Sbjct: 249 KYMFMKYLDGLNPLKIRIGDRTMTTPIG*RKNVVRSKNGSTSYPRKLR*W*YEAPTMKSR 428
Query: 651 LDNKAGKKPCATNRGDRKYC 592
D+ G CA GD+K C
Sbjct: 429 FDSSKGMNSCAIRSGDKK*C 488
>gb|AI994765.1|AI994765 701499621 A. thaliana, Ohio State clone set Arabidopsis thaliana
cDNA clone 701499621, mRNA sequence
Length = 387
Score = 157 bits (338), Expect = 5e-037
Identities = 60/84 (71%), Positives = 68/84 (80%)
Frame = +2 / +1
Query: 161 YLRRIVKWQQRDIEYTFWQMVHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVILILFLV 340
Y RRIVKWQQ D+EYTFWQM++LCTSP+VVYQHTK HK TKNQWARDDPAF+VI L LV
Sbjct: 115 YFRRIVKWQQMDVEYTFWQMLNLCTSPEVVYQHTKSHKHTKNQWARDDPAFIVICNLLLV 294
Query: 341 FATSAYCAAYGESASHAALTITSV 412
AT AYC Y S+SHA + + SV
Sbjct: 295 VATVAYCVTYDHSSSHAVVVVVSV 366
Score = 119 bits (254), Expect = 2e-025
Identities = 53/80 (66%), Positives = 59/80 (73%)
Frame = -3 / -2
Query: 411 TEVIVRAACEALSPYAAQ*ADVANTRKRIRITTNAGSSRAHWFFVCL*YLVC**TTFGEV 232
TE A E L Y Q*A VA TR R++IT NAGSSRAHWF VCL* LVC**TT G+V
Sbjct: 365 TETTTTTA*ELL*SYVTQ*ATVATTRSRLQITINAGSSRAHWFLVCL*DLVC**TTSGDV 186
Query: 231 QR*TICQNVYSISLCCHLTM 172
QR +ICQ VYS S+CCHLT+
Sbjct: 185 QRLSICQKVYSTSICCHLTI 126
>gb|BP856345.1|BP856345 BP856345 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-29-K24 5',
mRNA sequence
Length = 364
Score = 86.8 bits (183), Expect(2) = 2e-025
Identities = 33/38 (86%), Positives = 34/38 (89%)
Frame = +2 / +1
Query: 227 LCTSPKVVYQHTKYHKQTKNQWARDDPAFVVILILFLV 340
LCTSPKVVYQHTKYHKQTKNQWARDDP F+VI L LV
Sbjct: 250 LCTSPKVVYQHTKYHKQTKNQWARDDPGFIVICSLLLV 363
Score = 52.4 bits (108), Expect(2) = 2e-025
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = +2 / +3
Query: 152 FFFYLRRIVKWQQRDIEYTFWQMVH 226
F Y RRIVKWQQ D+EYTFWQM++
Sbjct: 174 FLQYFRRIVKWQQMDVEYTFWQMLN 248
>gb|CF773763.1|CF773763 AG_FSL_22C10 Arabidopsis ag-1 35S:AG-GR forward subtraction library
Arabidopsis thaliana cDNA clone 22C10, mRNA sequence
Length = 150
Score = 107 bits (229), Expect = 6e-022
Identities = 39/49 (79%), Positives = 48/49 (97%)
Frame = +2 / -3
Query: 680 YHYLNFLGYDVLPFLDRTTFFLYPIGLVIILSPLMILIGFNPTRYFLSL 826
YHYLNFLGYDVLPFL+RTTFFLYPIG+VI+LSP++IL GFNP+RYF+++
Sbjct: 148 YHYLNFLGYDVLPFLERTTFFLYPIGVVIVLSPILILSGFNPSRYFMNM 2
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 2,603,562,339
Number of Sequences: 1013581
Number of extensions: 40003250
Number of successful extensions: 209992
Number of sequences better than 1.0e-020: 22
length of database: 302,980,290
effective HSP length: 57
effective length of database: 245,206,173
effective search space used: 84350923512
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)