TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2949674.2.1
(658 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AV564310.1|AV564310 AV564310 Arabidopsis thaliana green ... 156 7e-037
gb|BT011599.1| Arabidopsis thaliana At1g74670 mRNA, complet... 156 7e-037
ref|NM_106125.2| Arabidopsis thaliana unknown protein AT1G7... 156 7e-037
emb|AX507440.1| Sequence 2135 from Patent WO0216655 156 7e-037
gb|AC011765.6|AC011765 Arabidopsis thaliana chromosome 1 BA... 148 2e-034
emb|CQ768510.1| Sequence 5 from Patent WO2004007712 148 2e-034
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 148 2e-034
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 148 2e-034
gb|T76365.1|T76365 11143 Lambda-PRL2 Arabidopsis thaliana c... 147 3e-034
gb|CF652903.1|CF652903 83-L020578-066-004-E22-SP6P MPIZ-ADI... 147 3e-034
gb|U53221.1|ATU53221 Arabidopsis thaliana GASA5 mRNA, compl... 147 3e-034
gb|BT002786.1| Arabidopsis thaliana clone RAFL14-87-E24 (R2... 147 4e-034
gb|BT004355.1| Arabidopsis thaliana clone U20167 unknown pr... 147 4e-034
ref|NM_111158.2| Arabidopsis thaliana GASA5 AT3G02885 (GASA... 147 4e-034
gb|AC009400.4|ATAC009400 Arabidopsis thaliana chromosome II... 146 7e-034
emb|CQ768534.1| Sequence 29 from Patent WO2004007712 146 7e-034
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 146 7e-034
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 146 7e-034
gb|AA597987.1|AA597987 29236 Lambda-PRL2 Arabidopsis thalia... 142 9e-033
gb|BX840626.1|BX840626 BX840626 Arabidopsis thaliana Siliqu... 142 9e-033
emb|BX842102.1|CNS09YAK Arabidopsis thaliana Full-length cD... 142 9e-033
emb|BX821278.1|CNS0A97T Arabidopsis thaliana Full-length cD... 142 9e-033
emb|BX821679.1|CNS0A97L Arabidopsis thaliana Full-length cD... 142 9e-033
gb|BT014937.1| Arabidopsis thaliana At2g30810 gene, complet... 142 9e-033
gb|BT015386.1| Arabidopsis thaliana At2g30810 gene, complet... 142 9e-033
ref|NM_128634.2| Arabidopsis thaliana unknown protein AT2G3... 142 9e-033
gb|AI999528.1|AI999528 701556307 A. thaliana, Columbia Col-... 138 2e-031
gb|AC018363.8|ATAC018363 Arabidopsis thaliana chromosome II... 138 2e-031
emb|CQ768522.1| Sequence 17 from Patent WO2004007712 138 2e-031
gb|AI993388.1|AI993388 701496169 A. thaliana, Ohio State cl... 136 8e-031
gb|BP577859.1|BP577859 BP577859 RAFL14 Arabidopsis thaliana... 134 3e-030
gb|AC004669.3| Arabidopsis thaliana chromosome 2 clone F7F1... 130 5e-029
emb|CQ768518.1| Sequence 13 from Patent WO2004007712 130 5e-029
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 130 5e-029
gb|AU227201.1|AU227201 AU227201 RAFL14 Arabidopsis thaliana... 127 2e-028
gb|AA040971.1|AA040971 24237 CD4-13 Arabidopsis thaliana cD... 127 3e-028
gb|AA041107.1|AA041107 24373 CD4-13 Arabidopsis thaliana cD... 127 3e-028
gb|AA042739.1|AA042739 24995 CD4-13 Arabidopsis thaliana cD... 127 3e-028
gb|AV789164.1|AV789164 AV789164 RAFL6 Arabidopsis thaliana ... 127 3e-028
gb|AV827687.1|AV827687 AV827687 RAFL9 Arabidopsis thaliana ... 127 3e-028
gb|AV828914.1|AV828914 AV828914 RAFL9 Arabidopsis thaliana ... 127 3e-028
gb|AV533248.1|AV533248 AV533248 Arabidopsis thaliana flower... 127 3e-028
gb|CK119066.1|CK119066 214j04.p1 AtM1 Arabidopsis thaliana ... 127 3e-028
gb|CB252164.1|CB252164 33-E012999-019-004-B09-T7R MPIZ-ADIS... 127 3e-028
gb|CB252166.1|CB252166 33-E012994-019-004-B09-SP6r MPIZ-ADI... 127 3e-028
gb|CB253683.1|CB253683 91-E010742-019-001-F24-T7R MPIZ-ADIS... 127 3e-028
gb|CB254813.1|CB254813 59-E010740-019-001-E20-T7R MPIZ-ADIS... 127 3e-028
gb|U15683.1|ATU15683 Arabidopsis thaliana gibberellin-regul... 127 3e-028
gb|AY057601.1| Arabidopsis thaliana AT5g15230/F8M21_120 mRN... 127 3e-028
emb|AX364097.1| Sequence 104 from Patent WO0208410 127 3e-028
emb|AX366182.1| Sequence 101 from Patent WO0208411 127 3e-028
gb|AF360199.1| Arabidopsis thaliana putative GASA4 protein ... 127 3e-028
emb|BX831643.1|CNS09ZMA Arabidopsis thaliana Full-length cD... 127 3e-028
emb|BX831662.1|CNS09ZRW Arabidopsis thaliana Full-length cD... 127 3e-028
emb|BX832325.1|CNS09ZTP Arabidopsis thaliana Full-length cD... 127 3e-028
ref|NM_121527.2| Arabidopsis thaliana GASA4 AT5G15230 (GASA... 127 3e-028
gb|AY040048.1| Arabidopsis thaliana putative GASA4 protein ... 127 3e-028
gb|AA728614.1|AA728614 33208 Lambda-PRL2 Arabidopsis thalia... 127 4e-028
gb|CB254814.1|CB254814 59-E010741-019-001-F08-T7R MPIZ-ADIS... 126 8e-028
gb|AA040973.1|AA040973 24239 CD4-13 Arabidopsis thaliana cD... 124 2e-027
gb|AA041128.1|AA041128 24394 CD4-13 Arabidopsis thaliana cD... 124 3e-027
gb|AA712285.1|AA712285 32013 Lambda-PRL2 Arabidopsis thalia... 124 3e-027
gb|CB254270.1|CB254270 75-E010932-019-003-E20-T7R MPIZ-ADIS... 123 4e-027
gb|BP853786.1|BP853786 BP853786 RAFL21 Arabidopsis thaliana... 79 5e-027
emb|X98255.1|ATGASA4 A.thaliana GASA4 gene 122 1e-026
emb|CQ768528.1| Sequence 23 from Patent WO2004007712 122 1e-026
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 122 1e-026
emb|AL353993.1|ATF8M21 Arabidopsis thaliana DNA chromosome ... 122 1e-026
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 122 1e-026
gb|AA042737.1|AA042737 24993 CD4-13 Arabidopsis thaliana cD... 120 4e-026
gb|AA040978.1|AA040978 24244 CD4-13 Arabidopsis thaliana cD... 120 5e-026
gb|AA042208.1|AA042208 24529 CD4-13 Arabidopsis thaliana cD... 120 5e-026
gb|AV803339.1|AV803339 AV803339 RAFL9 Arabidopsis thaliana ... 120 5e-026
gb|AV537779.1|AV537779 AV537779 Arabidopsis thaliana roots ... 120 5e-026
gb|AA041012.1|AA041012 24278 CD4-13 Arabidopsis thaliana cD... 116 9e-025
gb|AV799000.1|AV799000 AV799000 RAFL9 Arabidopsis thaliana ... 115 2e-024
gb|T20447.1|T20447 2455 Lambda-PRL2 Arabidopsis thaliana cD... 94 3e-024
gb|AA041125.1|AA041125 24391 CD4-13 Arabidopsis thaliana cD... 113 4e-024
gb|T43207.1|T43207 6470 Lambda-PRL2 Arabidopsis thaliana cD... 112 8e-024
gb|AI996588.1|AI996588 701667558 A. thaliana, Columbia Col-... 112 8e-024
gb|BP569655.1|BP569655 BP569655 RAFL14 Arabidopsis thaliana... 107 4e-022
gb|T20973.1|T20973 2981 Lambda-PRL2 Arabidopsis thaliana cD... 90 5e-022
gb|BP670576.1|BP670576 BP670576 RAFL21 Arabidopsis thaliana... 68 5e-022
gb|BP803621.1|BP803621 BP803621 RAFL14 Arabidopsis thaliana... 105 2e-021
>gb|AV564310.1|AV564310 AV564310 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ202d11F 3', mRNA sequence
Length = 547
Score = 156 bits (335), Expect = 7e-037
Identities = 51/69 (73%), Positives = 59/69 (85%)
Frame = +2 / -1
Query: 323 GTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKT 502
G GSL+ ++CGG+C RCS T Y KPC+FFC+KCCA CLCVPPGTYGNK CPCYNNWKT
Sbjct: 463 GPGSLKSYQCGGQCTRRCSNTKYHKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKT 284
Query: 503 KRGGPKCP* 529
++GGPKCP*
Sbjct: 283 QQGGPKCP* 257
>gb|BT011599.1| Arabidopsis thaliana At1g74670 mRNA, complete cds
Length = 575
Score = 156 bits (335), Expect = 7e-037
Identities = 51/69 (73%), Positives = 59/69 (85%)
Frame = +2 / +3
Query: 323 GTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKT 502
G GSL+ ++CGG+C RCS T Y KPC+FFC+KCCA CLCVPPGTYGNK CPCYNNWKT
Sbjct: 156 GPGSLKSYQCGGQCTRRCSNTKYHKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKT 335
Query: 503 KRGGPKCP* 529
++GGPKCP*
Sbjct: 336 QQGGPKCP* 362
>ref|NM_106125.2| Arabidopsis thaliana unknown protein AT1G74670 mRNA, complete cds
Length = 641
Score = 156 bits (335), Expect = 7e-037
Identities = 51/69 (73%), Positives = 59/69 (85%)
Frame = +2 / +2
Query: 323 GTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKT 502
G GSL+ ++CGG+C RCS T Y KPC+FFC+KCCA CLCVPPGTYGNK CPCYNNWKT
Sbjct: 179 GPGSLKSYQCGGQCTRRCSNTKYHKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKT 358
Query: 503 KRGGPKCP* 529
++GGPKCP*
Sbjct: 359 QQGGPKCP* 385
>emb|AX507440.1| Sequence 2135 from Patent WO0216655
Length = 243
Score = 156 bits (335), Expect = 7e-037
Identities = 51/69 (73%), Positives = 59/69 (85%)
Frame = +2 / +1
Query: 323 GTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKT 502
G GSL+ ++CGG+C RCS T Y KPC+FFC+KCCA CLCVPPGTYGNK CPCYNNWKT
Sbjct: 37 GPGSLKSYQCGGQCTRRCSNTKYHKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKT 216
Query: 503 KRGGPKCP* 529
++GGPKCP*
Sbjct: 217 QQGGPKCP* 243
>gb|AC011765.6|AC011765 Arabidopsis thaliana chromosome 1 BAC F1M20 genomic sequence, complete
sequence
Length = 134402
Score = 148 bits (317), Expect = 2e-034
Identities = 48/61 (78%), Positives = 53/61 (86%)
Frame = +2 / +3
Query: 347 ECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKTKRGGPKCP 526
ECGG+C RCS T Y KPC+FFC+KCCA CLCVPPGTYGNK CPCYNNWKT++GGPKCP
Sbjct: 110031 ECGGQCTRRCSNTKYHKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP 110210
Query: 527 * 529
*
Sbjct: 110211 * 110213
>emb|CQ768510.1| Sequence 5 from Patent WO2004007712
Length = 1453
Score = 148 bits (317), Expect = 2e-034
Identities = 48/61 (78%), Positives = 53/61 (86%)
Frame = +2 / +3
Query: 347 ECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKTKRGGPKCP 526
ECGG+C RCS T Y KPC+FFC+KCCA CLCVPPGTYGNK CPCYNNWKT++GGPKCP
Sbjct: 771 ECGGQCTRRCSNTKYHKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP 950
Query: 527 * 529
*
Sbjct: 951 * 953
>gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom arm complete sequence
Length = 14668883
Score = 148 bits (317), Expect = 2e-034
Identities = 48/61 (78%), Positives = 53/61 (86%)
Frame = +2 / +1
Query: 347 ECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKTKRGGPKCP 526
ECGG+C RCS T Y KPC+FFC+KCCA CLCVPPGTYGNK CPCYNNWKT++GGPKCP
Sbjct: 12295030 ECGGQCTRRCSNTKYHKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP 12295209
Query: 527 * 529
*
Sbjct: 12295210 * 12295212
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 148 bits (317), Expect = 2e-034
Identities = 48/61 (78%), Positives = 53/61 (86%)
Frame = +2 / +1
Query: 347 ECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKTKRGGPKCP 526
ECGG+C RCS T Y KPC+FFC+KCCA CLCVPPGTYGNK CPCYNNWKT++GGPKCP
Sbjct: 28057372 ECGGQCTRRCSNTKYHKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP 28057551
Query: 527 * 529
*
Sbjct: 28057552 * 28057554
>gb|T76365.1|T76365 11143 Lambda-PRL2 Arabidopsis thaliana cDNA clone 149B14T7, mRNA
sequence
Length = 420
Score = 147 bits (316), Expect = 3e-034
Identities = 47/68 (69%), Positives = 55/68 (80%)
Frame = +2 / +2
Query: 323 GTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKT 502
G GSL+ ++CGG+C RCS T Y KPC+ FC+KCCA CLCVPPGTYGNK CPCYNNW
Sbjct: 173 GPGSLKSYQCGGQCTRRCSNTKYHKPCMXFCQKCCAKCLCVPPGTYGNKQVCPCYNNWXA 352
Query: 503 KRGGPKCP 526
++GGPKCP
Sbjct: 353 QQGGPKCP 376
>gb|CF652903.1|CF652903 83-L020578-066-004-E22-SP6P MPIZ-ADIS-066 Arabidopsis thaliana cDNA
clone MPIZp2001E224Q 5-PRIME, mRNA sequence
Length = 701
Score = 147 bits (316), Expect = 3e-034
Identities = 48/69 (69%), Positives = 57/69 (82%)
Frame = +2 / +1
Query: 323 GTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKT 502
G G L+P +C +C+ RCSAT+++KPC+FFC KCC CLCVPPGT+GNK TCPCYNNWKT
Sbjct: 106 GGGKLKPQQCNSKCSYRCSATSHKKPCMFFCLKCCKKCLCVPPGTFGNKQTCPCYNNWKT 285
Query: 503 KRGGPKCP* 529
K G PKCP*
Sbjct: 286 KEGRPKCP* 312
>gb|U53221.1|ATU53221 Arabidopsis thaliana GASA5 mRNA, complete cds
Length = 454
Score = 147 bits (316), Expect = 3e-034
Identities = 48/69 (69%), Positives = 57/69 (82%)
Frame = +2 / +1
Query: 323 GTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKT 502
G G L+P +C +C+ RCSAT+++KPC+FFC KCC CLCVPPGT+GNK TCPCYNNWKT
Sbjct: 109 GGGKLKPQQCNSKCSYRCSATSHKKPCMFFCLKCCKKCLCVPPGTFGNKQTCPCYNNWKT 288
Query: 503 KRGGPKCP* 529
K G PKCP*
Sbjct: 289 KEGRPKCP* 315
>gb|BT002786.1| Arabidopsis thaliana clone RAFL14-87-E24 (R20167) unknown protein
(At3g02885) mRNA, complete cds
Length = 573
Score = 147 bits (315), Expect = 4e-034
Identities = 48/69 (69%), Positives = 57/69 (82%)
Frame = +2 / +3
Query: 323 GTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKT 502
G G L+P +C +C+ RCSAT+++KPC+FFC KCC CLCVPPGT+GNK TCPCYNNWKT
Sbjct: 129 GGGKLKPQQCNSKCSFRCSATSHKKPCMFFCLKCCKKCLCVPPGTFGNKQTCPCYNNWKT 308
Query: 503 KRGGPKCP* 529
K G PKCP*
Sbjct: 309 KEGRPKCP* 335
>gb|BT004355.1| Arabidopsis thaliana clone U20167 unknown protein (At3g02885) mRNA,
complete cds
Length = 325
Score = 147 bits (315), Expect = 4e-034
Identities = 48/69 (69%), Positives = 57/69 (82%)
Frame = +2 / +1
Query: 323 GTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKT 502
G G L+P +C +C+ RCSAT+++KPC+FFC KCC CLCVPPGT+GNK TCPCYNNWKT
Sbjct: 88 GGGKLKPQQCNSKCSFRCSATSHKKPCMFFCLKCCKKCLCVPPGTFGNKQTCPCYNNWKT 267
Query: 503 KRGGPKCP* 529
K G PKCP*
Sbjct: 268 KEGRPKCP* 294
>ref|NM_111158.2| Arabidopsis thaliana GASA5 AT3G02885 (GASA5) mRNA, complete cds
Length = 554
Score = 147 bits (315), Expect = 4e-034
Identities = 48/69 (69%), Positives = 57/69 (82%)
Frame = +2 / +3
Query: 323 GTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKT 502
G G L+P +C +C+ RCSAT+++KPC+FFC KCC CLCVPPGT+GNK TCPCYNNWKT
Sbjct: 129 GGGKLKPQQCNSKCSFRCSATSHKKPCMFFCLKCCKKCLCVPPGTFGNKQTCPCYNNWKT 308
Query: 503 KRGGPKCP* 529
K G PKCP*
Sbjct: 309 KEGRPKCP* 335
>gb|AC009400.4|ATAC009400 Arabidopsis thaliana chromosome III BAC F14P13 genomic sequence,
complete sequence
Length = 87937
Score = 146 bits (313), Expect = 7e-034
Identities = 49/61 (80%), Positives = 51/61 (83%)
Frame = +2 / -3
Query: 347 ECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKTKRGGPKCP 526
ECG RC +RCS T Y+KPCLFFC KCC CLCVPPGTYGNK CPCYNNWKTK GGPKCP
Sbjct: 84749 ECGPRCGDRCSNTQYKKPCLFFCNKCCNKCLCVPPGTYGNKQVCPCYNNWKTKSGGPKCP 84570
Query: 527 * 529
*
Sbjct: 84569 * 84567
>emb|CQ768534.1| Sequence 29 from Patent WO2004007712
Length = 750
Score = 146 bits (313), Expect = 7e-034
Identities = 49/61 (80%), Positives = 51/61 (83%)
Frame = +2 / +2
Query: 347 ECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKTKRGGPKCP 526
ECG RC +RCS T Y+KPCLFFC KCC CLCVPPGTYGNK CPCYNNWKTK GGPKCP
Sbjct: 452 ECGPRCGDRCSNTQYKKPCLFFCNKCCNKCLCVPPGTYGNKQVCPCYNNWKTKSGGPKCP 631
Query: 527 * 529
*
Sbjct: 632 * 634
>dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complete sequence
Length = 23403063
Score = 146 bits (313), Expect = 7e-034
Identities = 49/61 (80%), Positives = 51/61 (83%)
Frame = +2 / -2
Query: 347 ECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKTKRGGPKCP 526
ECG RC +RCS T Y+KPCLFFC KCC CLCVPPGTYGNK CPCYNNWKTK GGPKCP
Sbjct: 3223556 ECGPRCGDRCSNTQYKKPCLFFCNKCCNKCLCVPPGTYGNKQVCPCYNNWKTKSGGPKCP 3223377
Query: 527 * 529
*
Sbjct: 3223376 * 3223374
Score = 138 bits (296), Expect = 2e-031
Identities = 45/61 (73%), Positives = 52/61 (85%)
Frame = +2 / +3
Query: 347 ECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKTKRGGPKCP 526
EC +C+ RCSAT+++KPC+FFC KCC CLCVPPGT+GNK TCPCYNNWKTK G PKCP
Sbjct: 633567 ECNSKCSFRCSATSHKKPCMFFCLKCCKKCLCVPPGTFGNKQTCPCYNNWKTKEGRPKCP 633746
Query: 527 * 529
*
Sbjct: 633747 * 633749
>ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complete sequence
Length = 23470805
Score = 146 bits (313), Expect = 7e-034
Identities = 49/61 (80%), Positives = 51/61 (83%)
Frame = +2 / +3
Query: 347 ECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKTKRGGPKCP 526
ECG RC +RCS T Y+KPCLFFC KCC CLCVPPGTYGNK CPCYNNWKTK GGPKCP
Sbjct: 3146022 ECGPRCGDRCSNTQYKKPCLFFCNKCCNKCLCVPPGTYGNKQVCPCYNNWKTKSGGPKCP 3146201
Query: 527 * 529
*
Sbjct: 3146202 * 3146204
Score = 138 bits (296), Expect = 2e-031
Identities = 45/61 (73%), Positives = 52/61 (85%)
Frame = +2 / -2
Query: 347 ECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKTKRGGPKCP 526
EC +C+ RCSAT+++KPC+FFC KCC CLCVPPGT+GNK TCPCYNNWKTK G PKCP
Sbjct: 638512 ECNSKCSFRCSATSHKKPCMFFCLKCCKKCLCVPPGTFGNKQTCPCYNNWKTKEGRPKCP 638333
Query: 527 * 529
*
Sbjct: 638332 * 638330
>gb|AA597987.1|AA597987 29236 Lambda-PRL2 Arabidopsis thaliana cDNA clone 249D9T7, mRNA
sequence
Length = 359
Score = 142 bits (305), Expect = 9e-033
Identities = 49/69 (71%), Positives = 54/69 (78%)
Frame = +2 / +3
Query: 323 GTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKT 502
G GSL+P EC C RCSAT+++KPCLFFC KCC CLCVP GTYG+K CPCYNNW T
Sbjct: 42 GEGSLKPEECPKACEYRCSATSHRKPCLFFCNKCCNKCLCVPSGTYGHKEECPCYNNWTT 221
Query: 503 KRGGPKCP* 529
K GGPKCP*
Sbjct: 222 KEGGPKCP* 248
>gb|BX840626.1|BX840626 BX840626 Arabidopsis thaliana Silique Col-0 Arabidopsis thaliana
cDNA clone GSLTSIL95ZB07 5PRIM, mRNA sequence
Length = 455
Score = 142 bits (305), Expect = 9e-033
Identities = 49/69 (71%), Positives = 54/69 (78%)
Frame = +2 / +1
Query: 323 GTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKT 502
G GSL+P EC C RCSAT+++KPCLFFC KCC CLCVP GTYG+K CPCYNNW T
Sbjct: 139 GEGSLKPEECPKACEYRCSATSHRKPCLFFCNKCCNKCLCVPSGTYGHKEECPCYNNWTT 318
Query: 503 KRGGPKCP* 529
K GGPKCP*
Sbjct: 319 KEGGPKCP* 345
>emb|BX842102.1|CNS09YAK Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL95ZH08 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 456
Score = 142 bits (305), Expect = 9e-033
Identities = 49/69 (71%), Positives = 54/69 (78%)
Frame = +2 / +2
Query: 323 GTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKT 502
G GSL+P EC C RCSAT+++KPCLFFC KCC CLCVP GTYG+K CPCYNNW T
Sbjct: 140 GEGSLKPEECPKACEYRCSATSHRKPCLFFCNKCCNKCLCVPSGTYGHKEECPCYNNWTT 319
Query: 503 KRGGPKCP* 529
K GGPKCP*
Sbjct: 320 KEGGPKCP* 346
>emb|BX821278.1|CNS0A97T Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL31ZF06 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 456
Score = 142 bits (305), Expect = 9e-033
Identities = 49/69 (71%), Positives = 54/69 (78%)
Frame = +2 / +2
Query: 323 GTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKT 502
G GSL+P EC C RCSAT+++KPCLFFC KCC CLCVP GTYG+K CPCYNNW T
Sbjct: 140 GEGSLKPEECPKACEYRCSATSHRKPCLFFCNKCCNKCLCVPSGTYGHKEECPCYNNWTT 319
Query: 503 KRGGPKCP* 529
K GGPKCP*
Sbjct: 320 KEGGPKCP* 346
>emb|BX821679.1|CNS0A97L Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL64ZE07 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 463
Score = 142 bits (305), Expect = 9e-033
Identities = 49/69 (71%), Positives = 54/69 (78%)
Frame = +2 / +3
Query: 323 GTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKT 502
G GSL+P EC C RCSAT+++KPCLFFC KCC CLCVP GTYG+K CPCYNNW T
Sbjct: 138 GEGSLKPEECPKACEYRCSATSHRKPCLFFCNKCCNKCLCVPSGTYGHKEECPCYNNWTT 317
Query: 503 KRGGPKCP* 529
K GGPKCP*
Sbjct: 318 KEGGPKCP* 344
>gb|BT014937.1| Arabidopsis thaliana At2g30810 gene, complete cds
Length = 412
Score = 142 bits (305), Expect = 9e-033
Identities = 49/69 (71%), Positives = 54/69 (78%)
Frame = +2 / +1
Query: 323 GTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKT 502
G GSL+P EC C RCSAT+++KPCLFFC KCC CLCVP GTYG+K CPCYNNW T
Sbjct: 124 GEGSLKPEECPKACEYRCSATSHRKPCLFFCNKCCNKCLCVPSGTYGHKEECPCYNNWTT 303
Query: 503 KRGGPKCP* 529
K GGPKCP*
Sbjct: 304 KEGGPKCP* 330
>gb|BT015386.1| Arabidopsis thaliana At2g30810 gene, complete cds
Length = 321
Score = 142 bits (305), Expect = 9e-033
Identities = 49/69 (71%), Positives = 54/69 (78%)
Frame = +2 / +1
Query: 323 GTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKT 502
G GSL+P EC C RCSAT+++KPCLFFC KCC CLCVP GTYG+K CPCYNNW T
Sbjct: 115 GEGSLKPEECPKACEYRCSATSHRKPCLFFCNKCCNKCLCVPSGTYGHKEECPCYNNWTT 294
Query: 503 KRGGPKCP* 529
K GGPKCP*
Sbjct: 295 KEGGPKCP* 321
>ref|NM_128634.2| Arabidopsis thaliana unknown protein AT2G30810 mRNA, complete cds
Length = 464
Score = 142 bits (305), Expect = 9e-033
Identities = 49/69 (71%), Positives = 54/69 (78%)
Frame = +2 / +2
Query: 323 GTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKT 502
G GSL+P EC C RCSAT+++KPCLFFC KCC CLCVP GTYG+K CPCYNNW T
Sbjct: 140 GEGSLKPEECPKACEYRCSATSHRKPCLFFCNKCCNKCLCVPSGTYGHKEECPCYNNWTT 319
Query: 503 KRGGPKCP* 529
K GGPKCP*
Sbjct: 320 KEGGPKCP* 346
>gb|AI999528.1|AI999528 701556307 A. thaliana, Columbia Col-0, rosette-3 Arabidopsis
thaliana cDNA clone 701556307, mRNA sequence
Length = 627
Score = 138 bits (296), Expect = 2e-031
Identities = 45/61 (73%), Positives = 52/61 (85%)
Frame = +2 / -1
Query: 347 ECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKTKRGGPKCP 526
EC +C+ RCSAT+++KPC+FFC KCC CLCVPPGT+GNK TCPCYNNWKTK G PKCP
Sbjct: 402 ECNSKCSFRCSATSHKKPCMFFCLKCCKKCLCVPPGTFGNKQTCPCYNNWKTKEGRPKCP 223
Query: 527 * 529
*
Sbjct: 222 * 220
>gb|AC018363.8|ATAC018363 Arabidopsis thaliana chromosome III BAC F13E7 genomic sequence,
complete sequence
Length = 100559
Score = 138 bits (296), Expect = 2e-031
Identities = 45/61 (73%), Positives = 52/61 (85%)
Frame = +2 / +1
Query: 347 ECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKTKRGGPKCP 526
EC +C+ RCSAT+++KPC+FFC KCC CLCVPPGT+GNK TCPCYNNWKTK G PKCP
Sbjct: 47806 ECNSKCSFRCSATSHKKPCMFFCLKCCKKCLCVPPGTFGNKQTCPCYNNWKTKEGRPKCP 47985
Query: 527 * 529
*
Sbjct: 47986 * 47988
>emb|CQ768522.1| Sequence 17 from Patent WO2004007712
Length = 1689
Score = 138 bits (296), Expect = 2e-031
Identities = 45/61 (73%), Positives = 52/61 (85%)
Frame = +2 / +2
Query: 347 ECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKTKRGGPKCP 526
EC +C+ RCSAT+++KPC+FFC KCC CLCVPPGT+GNK TCPCYNNWKTK G PKCP
Sbjct: 1007 ECNSKCSFRCSATSHKKPCMFFCLKCCKKCLCVPPGTFGNKQTCPCYNNWKTKEGRPKCP 1186
Query: 527 * 529
*
Sbjct: 1187 * 1189
>gb|AI993388.1|AI993388 701496169 A. thaliana, Ohio State clone set Arabidopsis thaliana
cDNA clone 701496169, mRNA sequence
Length = 369
Score = 136 bits (291), Expect = 8e-031
Identities = 44/63 (69%), Positives = 52/63 (82%)
Frame = +2 / +2
Query: 323 GTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKT 502
G GSL+ ++CGG+C RCS T Y KPC+FFC+KCCA CLCVPPGTYGNK CPC NNWKT
Sbjct: 179 GPGSLKSYQCGGQCTRRCSNTKYHKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCNNNWKT 358
Query: 503 KRG 511
++G
Sbjct: 359 QQG 367
>gb|BP577859.1|BP577859 BP577859 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-98-G06 3',
mRNA sequence
Length = 450
Score = 134 bits (287), Expect = 3e-030
Identities = 45/69 (65%), Positives = 54/69 (78%)
Frame = +2 / -3
Query: 323 GTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKT 502
G G L+P +C +C+ RCSAT+++KPC+FFC KC LCVPP T+GNK TCPCYNNWKT
Sbjct: 427 GGGKLKPQQCNSKCSFRCSATSHKKPCIFFCLKCFKKFLCVPPATFGNKQTCPCYNNWKT 248
Query: 503 KRGGPKCP* 529
K G PKCP*
Sbjct: 247 KEGRPKCP* 221
>gb|AC004669.3| Arabidopsis thaliana chromosome 2 clone F7F1 map m283, complete
sequence
Length = 89779
Score = 130 bits (278), Expect = 5e-029
Identities = 44/61 (72%), Positives = 48/61 (78%)
Frame = +2 / -3
Query: 347 ECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKTKRGGPKCP 526
EC C RCSAT+++KPCLFFC KCC CLCVP GTYG+K CPCYNNW TK GGPKCP
Sbjct: 2585 ECPKACEYRCSATSHRKPCLFFCNKCCNKCLCVPSGTYGHKEECPCYNNWTTKEGGPKCP 2406
Query: 527 * 529
*
Sbjct: 2405 * 2403
>emb|CQ768518.1| Sequence 13 from Patent WO2004007712
Length = 1594
Score = 130 bits (278), Expect = 5e-029
Identities = 44/61 (72%), Positives = 48/61 (78%)
Frame = +2 / +3
Query: 347 ECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKTKRGGPKCP 526
EC C RCSAT+++KPCLFFC KCC CLCVP GTYG+K CPCYNNW TK GGPKCP
Sbjct: 912 ECPKACEYRCSATSHRKPCLFFCNKCCNKCLCVPSGTYGHKEECPCYNNWTTKEGGPKCP 1091
Query: 527 * 529
*
Sbjct: 1092 * 1094
>ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complete sequence
Length = 19705359
Score = 130 bits (278), Expect = 5e-029
Identities = 44/61 (72%), Positives = 48/61 (78%)
Frame = +2 / -3
Query: 347 ECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKTKRGGPKCP 526
EC C RCSAT+++KPCLFFC KCC CLCVP GTYG+K CPCYNNW TK GGPKCP
Sbjct: 13135204 ECPKACEYRCSATSHRKPCLFFCNKCCNKCLCVPSGTYGHKEECPCYNNWTTKEGGPKCP 13135025
Query: 527 * 529
*
Sbjct: 13135024 * 13135022
>gb|AU227201.1|AU227201 AU227201 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-87-E24 3',
mRNA sequence
Length = 378
Score = 127 bits (273), Expect = 2e-028
Identities = 42/53 (79%), Positives = 47/53 (88%)
Frame = +2 / -1
Query: 371 RCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKTKRGGPKCP* 529
RCSAT+++KPC+FFC KCC CLCVPPGT+GNK TCPCYNNWKTK G PKCP*
Sbjct: 378 RCSATSHKKPCMFFCLKCCKKCLCVPPGTFGNKQTCPCYNNWKTKEGRPKCP* 220
>gb|AA040971.1|AA040971 24237 CD4-13 Arabidopsis thaliana cDNA clone E10D8T7, mRNA sequence
Length = 588
Score = 127 bits (272), Expect = 3e-028
Identities = 43/69 (62%), Positives = 47/69 (68%)
Frame = +2 / -2
Query: 323 GTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKT 502
G GSL+ +C C RC T Y K C+ FC KCC CLCVPPG YGNK C CYNNWKT
Sbjct: 347 GPGSLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKT 168
Query: 503 KRGGPKCP* 529
+ GGPKCP*
Sbjct: 167 QEGGPKCP* 141
>gb|AA041107.1|AA041107 24373 CD4-13 Arabidopsis thaliana cDNA clone E1G11T7, mRNA sequence
Length = 687
Score = 127 bits (272), Expect = 3e-028
Identities = 43/69 (62%), Positives = 47/69 (68%)
Frame = +2 / +1
Query: 323 GTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKT 502
G GSL+ +C C RC T Y K C+ FC KCC CLCVPPG YGNK C CYNNWKT
Sbjct: 187 GPGSLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKT 366
Query: 503 KRGGPKCP* 529
+ GGPKCP*
Sbjct: 367 QEGGPKCP* 393
>gb|AA042739.1|AA042739 24995 CD4-13 Arabidopsis thaliana cDNA clone E8D10T7, mRNA sequence
Length = 636
Score = 127 bits (272), Expect = 3e-028
Identities = 43/69 (62%), Positives = 47/69 (68%)
Frame = +2 / +2
Query: 323 GTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKT 502
G GSL+ +C C RC T Y K C+ FC KCC CLCVPPG YGNK C CYNNWKT
Sbjct: 188 GPGSLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKT 367
Query: 503 KRGGPKCP* 529
+ GGPKCP*
Sbjct: 368 QEGGPKCP* 394
>gb|AV789164.1|AV789164 AV789164 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-82-H18 3',
mRNA sequence
Length = 421
Score = 127 bits (272), Expect = 3e-028
Identities = 43/69 (62%), Positives = 47/69 (68%)
Frame = +2 / -3
Query: 323 GTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKT 502
G GSL+ +C C RC T Y K C+ FC KCC CLCVPPG YGNK C CYNNWKT
Sbjct: 383 GPGSLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKT 204
Query: 503 KRGGPKCP* 529
+ GGPKCP*
Sbjct: 203 QEGGPKCP* 177
>gb|AV827687.1|AV827687 AV827687 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-18-F02 5',
mRNA sequence
Length = 626
Score = 127 bits (272), Expect = 3e-028
Identities = 43/69 (62%), Positives = 47/69 (68%)
Frame = +2 / +2
Query: 323 GTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKT 502
G GSL+ +C C RC T Y K C+ FC KCC CLCVPPG YGNK C CYNNWKT
Sbjct: 230 GPGSLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKT 409
Query: 503 KRGGPKCP* 529
+ GGPKCP*
Sbjct: 410 QEGGPKCP* 436
>gb|AV828914.1|AV828914 AV828914 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-35-D01 5',
mRNA sequence
Length = 504
Score = 127 bits (272), Expect = 3e-028
Identities = 43/69 (62%), Positives = 47/69 (68%)
Frame = +2 / +2
Query: 323 GTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKT 502
G GSL+ +C C RC T Y K C+ FC KCC CLCVPPG YGNK C CYNNWKT
Sbjct: 230 GPGSLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKT 409
Query: 503 KRGGPKCP* 529
+ GGPKCP*
Sbjct: 410 QEGGPKCP* 436
>gb|AV533248.1|AV533248 AV533248 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB058e03F 3', mRNA sequence
Length = 568
Score = 127 bits (272), Expect = 3e-028
Identities = 43/69 (62%), Positives = 47/69 (68%)
Frame = +2 / -3
Query: 323 GTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKT 502
G GSL+ +C C RC T Y K C+ FC KCC CLCVPPG YGNK C CYNNWKT
Sbjct: 383 GPGSLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKT 204
Query: 503 KRGGPKCP* 529
+ GGPKCP*
Sbjct: 203 QEGGPKCP* 177
>gb|CK119066.1|CK119066 214j04.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011J04214
5-PRIME, mRNA sequence
Length = 594
Score = 127 bits (272), Expect = 3e-028
Identities = 43/69 (62%), Positives = 47/69 (68%)
Frame = +2 / +3
Query: 323 GTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKT 502
G GSL+ +C C RC T Y K C+ FC KCC CLCVPPG YGNK C CYNNWKT
Sbjct: 30 GPGSLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKT 209
Query: 503 KRGGPKCP* 529
+ GGPKCP*
Sbjct: 210 QEGGPKCP* 236
>gb|CB252164.1|CB252164 33-E012999-019-004-B09-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768B094Q 5-PRIME, mRNA sequence
Length = 575
Score = 127 bits (272), Expect = 3e-028
Identities = 43/69 (62%), Positives = 47/69 (68%)
Frame = +2 / +2
Query: 323 GTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKT 502
G GSL+ +C C RC T Y K C+ FC KCC CLCVPPG YGNK C CYNNWKT
Sbjct: 176 GPGSLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKT 355
Query: 503 KRGGPKCP* 529
+ GGPKCP*
Sbjct: 356 QEGGPKCP* 382
>gb|CB252166.1|CB252166 33-E012994-019-004-B09-SP6r MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768B094Q 3-PRIME, mRNA sequence
Length = 576
Score = 127 bits (272), Expect = 3e-028
Identities = 43/69 (62%), Positives = 47/69 (68%)
Frame = +2 / -2
Query: 323 GTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKT 502
G GSL+ +C C RC T Y K C+ FC KCC CLCVPPG YGNK C CYNNWKT
Sbjct: 401 GPGSLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKT 222
Query: 503 KRGGPKCP* 529
+ GGPKCP*
Sbjct: 221 QEGGPKCP* 195
>gb|CB253683.1|CB253683 91-E010742-019-001-F24-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768F241Q 5-PRIME, mRNA sequence
Length = 643
Score = 127 bits (272), Expect = 3e-028
Identities = 43/69 (62%), Positives = 47/69 (68%)
Frame = +2 / +1
Query: 323 GTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKT 502
G GSL+ +C C RC T Y K C+ FC KCC CLCVPPG YGNK C CYNNWKT
Sbjct: 244 GPGSLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKT 423
Query: 503 KRGGPKCP* 529
+ GGPKCP*
Sbjct: 424 QEGGPKCP* 450
>gb|CB254813.1|CB254813 59-E010740-019-001-E20-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768E201Q 5-PRIME, mRNA sequence
Length = 561
Score = 127 bits (272), Expect = 3e-028
Identities = 43/69 (62%), Positives = 47/69 (68%)
Frame = +2 / +3
Query: 323 GTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKT 502
G GSL+ +C C RC T Y K C+ FC KCC CLCVPPG YGNK C CYNNWKT
Sbjct: 204 GPGSLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKT 383
Query: 503 KRGGPKCP* 529
+ GGPKCP*
Sbjct: 384 QEGGPKCP* 410
>gb|U15683.1|ATU15683 Arabidopsis thaliana gibberellin-regulated (GASA4) mRNA, complete
cds
Length = 613
Score = 127 bits (272), Expect = 3e-028
Identities = 43/69 (62%), Positives = 47/69 (68%)
Frame = +2 / +1
Query: 323 GTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKT 502
G GSL+ +C C RC T Y K C+ FC KCC CLCVPPG YGNK C CYNNWKT
Sbjct: 229 GPGSLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKT 408
Query: 503 KRGGPKCP* 529
+ GGPKCP*
Sbjct: 409 QEGGPKCP* 435
>gb|AY057601.1| Arabidopsis thaliana AT5g15230/F8M21_120 mRNA, complete cds
Length = 649
Score = 127 bits (272), Expect = 3e-028
Identities = 43/69 (62%), Positives = 47/69 (68%)
Frame = +2 / +1
Query: 323 GTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKT 502
G GSL+ +C C RC T Y K C+ FC KCC CLCVPPG YGNK C CYNNWKT
Sbjct: 229 GPGSLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKT 408
Query: 503 KRGGPKCP* 529
+ GGPKCP*
Sbjct: 409 QEGGPKCP* 435
>emb|AX364097.1| Sequence 104 from Patent WO0208410
Length = 1094
Score = 127 bits (272), Expect = 3e-028
Identities = 43/69 (62%), Positives = 47/69 (68%)
Frame = +2 / -3
Query: 323 GTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKT 502
G GSL+ +C C RC T Y K C+ FC KCC CLCVPPG YGNK C CYNNWKT
Sbjct: 924 GPGSLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKT 745
Query: 503 KRGGPKCP* 529
+ GGPKCP*
Sbjct: 744 QEGGPKCP* 718
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,008,104,942
Number of Sequences: 1013581
Number of extensions: 12660725
Number of successful extensions: 137423
Number of sequences better than 1.0e-020: 116
length of database: 302,980,290
effective HSP length: 55
effective length of database: 247,233,335
effective search space used: 40299033605
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)