TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2907809.2.1
(614 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AV788015.1|AV788015 AV788015 RAFL6 Arabidopsis thaliana ... 122 2e-031
gb|BP576809.1|BP576809 BP576809 RAFL14 Arabidopsis thaliana... 122 3e-030
gb|AV802724.1|AV802724 AV802724 RAFL9 Arabidopsis thaliana ... 122 3e-030
gb|BP654917.1|BP654917 BP654917 RAFL19 Arabidopsis thaliana... 122 3e-030
gb|BP851191.1|BP851191 BP851191 RAFL21 Arabidopsis thaliana... 114 8e-030
gb|AV785733.1|AV785733 AV785733 RAFL6 Arabidopsis thaliana ... 122 2e-029
gb|BP583966.1|BP583966 BP583966 RAFL14 Arabidopsis thaliana... 120 8e-029
gb|BP588279.1|BP588279 BP588279 RAFL15 Arabidopsis thaliana... 122 1e-028
gb|CD531919.1|CD531919 12J01 Arabidopsis Leaf Senescence Li... 122 2e-028
gb|BP591915.1|BP591915 BP591915 RAFL15 Arabidopsis thaliana... 118 2e-028
gb|BP589484.1|BP589484 BP589484 RAFL15 Arabidopsis thaliana... 121 3e-028
gb|BP853998.1|BP853998 BP853998 RAFL21 Arabidopsis thaliana... 105 2e-027
gb|BE038151.1|BE038151 AA09E09 AA Arabidopsis thaliana cDNA... 123 4e-027
gb|BE039244.1|BE039244 AC01A08 AC Arabidopsis thaliana cDNA... 123 4e-027
gb|AV824639.1|AV824639 AV824639 RAFL6 Arabidopsis thaliana ... 123 4e-027
gb|CB263473.1|CB263473 20-E9724-008-016-H06-pBl2 MPIZ-ADIS-... 123 4e-027
gb|CD534117.1|CD534117 35L2 Arabidopsis Leaf Senescence Lib... 123 4e-027
gb|BP560607.2|BP560607 BP560607 RAFL4 Arabidopsis thaliana ... 123 4e-027
gb|BP809885.1|BP809885 BP809885 RAFL16 Arabidopsis thaliana... 123 4e-027
gb|BP813417.1|BP813417 BP813417 RAFL19 Arabidopsis thaliana... 123 4e-027
gb|BP834741.1|BP834741 BP834741 RAFL19 Arabidopsis thaliana... 123 4e-027
gb|AY052343.1| Arabidopsis thaliana At2g23090/F21P24.15 mRN... 123 4e-027
gb|AY056377.1| Arabidopsis thaliana At2g23090/F21P24.15 mRN... 123 4e-027
gb|AY142543.1| Arabidopsis thaliana clone RAFL04-14-I04 (R0... 123 4e-027
gb|AY085311.1| Arabidopsis thaliana clone 14468 mRNA, compl... 123 4e-027
emb|BX819905.1|CNS0A9GG Arabidopsis thaliana Full-length cD... 123 4e-027
emb|BX821290.1|CNS0A98Y Arabidopsis thaliana Full-length cD... 123 4e-027
ref|NM_127873.3| Arabidopsis thaliana unknown protein AT2G2... 123 4e-027
gb|AY143800.1| Arabidopsis thaliana At2g23090/F21P24.15 mRN... 123 5e-027
emb|BX821559.1|CNS0A96B Arabidopsis thaliana Full-length cD... 122 7e-027
gb|BP805505.1|BP805505 BP805505 RAFL16 Arabidopsis thaliana... 102 8e-027
gb|AV787104.1|AV787104 AV787104 RAFL6 Arabidopsis thaliana ... 122 1e-026
gb|BP614016.1|BP614016 BP614016 RAFL16 Arabidopsis thaliana... 121 2e-026
gb|BP802211.1|BP802211 BP802211 RAFL14 Arabidopsis thaliana... 121 3e-026
gb|BP840268.1|BP840268 BP840268 RAFL19 Arabidopsis thaliana... 121 3e-026
gb|AV828766.1|AV828766 AV828766 RAFL9 Arabidopsis thaliana ... 119 7e-026
gb|BP821343.1|BP821343 BP821343 RAFL19 Arabidopsis thaliana... 118 1e-025
gb|BP829420.1|BP829420 BP829420 RAFL19 Arabidopsis thaliana... 99 2e-025
gb|BP638604.1|BP638604 BP638604 RAFL19 Arabidopsis thaliana... 118 2e-025
gb|BP591843.1|BP591843 BP591843 RAFL15 Arabidopsis thaliana... 117 2e-025
gb|AV522137.1|AV522137 AV522137 Arabidopsis thaliana aboveg... 117 3e-025
gb|BP835536.1|BP835536 BP835536 RAFL19 Arabidopsis thaliana... 108 4e-025
gb|BP854157.1|BP854157 BP854157 RAFL21 Arabidopsis thaliana... 116 4e-025
gb|BP847952.1|BP847952 BP847952 RAFL21 Arabidopsis thaliana... 111 5e-025
gb|BP602671.1|BP602671 BP602671 RAFL16 Arabidopsis thaliana... 116 6e-025
gb|BP829505.1|BP829505 BP829505 RAFL19 Arabidopsis thaliana... 114 2e-024
gb|AI999629.1|AI999629 701556759 A. thaliana, Columbia Col-... 113 4e-024
gb|AV787108.1|AV787108 AV787108 RAFL6 Arabidopsis thaliana ... 113 4e-024
gb|BP832596.1|BP832596 BP832596 RAFL19 Arabidopsis thaliana... 113 4e-024
gb|BP602416.1|BP602416 BP602416 RAFL16 Arabidopsis thaliana... 109 6e-024
gb|BP806898.1|BP806898 BP806898 RAFL16 Arabidopsis thaliana... 101 5e-023
gb|T88621.1|T88621 12317 Lambda-PRL2 Arabidopsis thaliana c... 109 7e-023
gb|BP592341.1|BP592341 BP592341 RAFL15 Arabidopsis thaliana... 109 7e-023
gb|BP812336.1|BP812336 BP812336 RAFL19 Arabidopsis thaliana... 90 7e-023
gb|AI099644.1|AI099644 34370 Lambda-PRL2 Arabidopsis thalia... 108 3e-022
gb|BP568258.1|BP568258 BP568258 RAFL14 Arabidopsis thaliana... 90 4e-022
gb|BP651762.1|BP651762 BP651762 RAFL19 Arabidopsis thaliana... 88 7e-022
gb|BP657047.1|BP657047 BP657047 RAFL19 Arabidopsis thaliana... 106 7e-022
gb|AC004401.3| Arabidopsis thaliana chromosome 2 clone F21P... 89 8e-022
gb|BP828254.1|BP828254 BP828254 RAFL19 Arabidopsis thaliana... 100 9e-022
gb|F19854.1|F19854 ATTS5893 Ors-B Arabidopsis thaliana cDNA... 104 3e-021
gb|BP630169.1|BP630169 BP630169 RAFL17 Arabidopsis thaliana... 75 4e-021
gb|BP670205.1|BP670205 BP670205 RAFL21 Arabidopsis thaliana... 103 4e-021
gb|H76367.1|H76367 18072 Lambda-PRL2 Arabidopsis thaliana c... 94 8e-021
>gb|AV788015.1|AV788015 AV788015 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-77-N07 3',
mRNA sequence
Length = 421
Score = 122 bits (261), Expect(2) = 2e-031
Identities = 47/57 (82%), Positives = 52/57 (91%)
Frame = +1 / -2
Query: 190 GKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEARHPKNDLYQCFPHLKN** 360
GKGSQLEANKKAM+IQCK+CMQTFICTTSE KC+EHAEA+HPK D+ CFPHLK **
Sbjct: 333 GKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPHLKK** 163
Score = 35.4 bits (71), Expect(2) = 2e-031
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +1 / -2
Query: 124 MGGGNAQKSKMARERNAEKNK 186
MGG NAQKS MAR +N EK K
Sbjct: 402 MGGRNAQKSAMARAKNLEKAK 340
>gb|BP576809.1|BP576809 BP576809 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-93-G19 3',
mRNA sequence
Length = 431
Score = 122 bits (261), Expect(2) = 3e-030
Identities = 47/57 (82%), Positives = 52/57 (91%)
Frame = +1 / -1
Query: 190 GKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEARHPKNDLYQCFPHLKN** 360
GKGSQLEANKKAM+IQCK+CMQTFICTTSE KC+EHAEA+HPK D+ CFPHLK **
Sbjct: 371 GKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPHLKK** 201
Score = 31.3 bits (62), Expect(2) = 3e-030
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +1 / -1
Query: 133 GNAQKSKMARERNAEKNK 186
GNAQKS MAR +N EK K
Sbjct: 431 GNAQKSAMARAKNLEKAK 378
>gb|AV802724.1|AV802724 AV802724 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-32-P22 3',
mRNA sequence
Length = 395
Score = 122 bits (261), Expect(2) = 3e-030
Identities = 47/57 (82%), Positives = 52/57 (91%)
Frame = +1 / -3
Query: 190 GKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEARHPKNDLYQCFPHLKN** 360
GKGSQLEANKKAM+IQCK+CMQTFICTTSE KC+EHAEA+HPK D+ CFPHLK **
Sbjct: 333 GKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPHLKK** 163
Score = 31.3 bits (62), Expect(2) = 3e-030
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +1 / -3
Query: 133 GNAQKSKMARERNAEKNK 186
GNAQKS MAR +N EK K
Sbjct: 393 GNAQKSAMARAKNLEKAK 340
>gb|BP654917.1|BP654917 BP654917 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-19-E23 3',
mRNA sequence
Length = 393
Score = 122 bits (261), Expect(2) = 3e-030
Identities = 47/57 (82%), Positives = 52/57 (91%)
Frame = +1 / -1
Query: 190 GKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEARHPKNDLYQCFPHLKN** 360
GKGSQLEANKKAM+IQCK+CMQTFICTTSE KC+EHAEA+HPK D+ CFPHLK **
Sbjct: 333 GKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPHLKK** 163
Score = 31.3 bits (62), Expect(2) = 3e-030
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +1 / -1
Query: 133 GNAQKSKMARERNAEKNK 186
GNAQKS MAR +N EK K
Sbjct: 393 GNAQKSAMARPKNLEKAK 340
>gb|BP851191.1|BP851191 BP851191 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-15-J06 5',
mRNA sequence
Length = 410
Score = 114 bits (243), Expect(2) = 8e-030
Identities = 44/56 (78%), Positives = 50/56 (89%)
Frame = +1 / +3
Query: 193 KGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEARHPKNDLYQCFPHLKN** 360
K +QLEANKKAM+IQCK+CMQTFICTTSE KC+EHAEA+HPK D+ CFPHLK **
Sbjct: 210 KVAQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPHLKK** 377
Score = 38.2 bits (77), Expect(2) = 8e-030
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = +1 / +2
Query: 124 MGGGNAQKSKMARERNAEKNK 186
MGGGNAQKS MAR +N EK K
Sbjct: 137 MGGGNAQKSAMARAKNWEKAK 199
>gb|AV785733.1|AV785733 AV785733 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-68-D15 3',
mRNA sequence
Length = 405
Score = 122 bits (261), Expect(2) = 2e-029
Identities = 47/57 (82%), Positives = 52/57 (91%)
Frame = +1 / -3
Query: 190 GKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEARHPKNDLYQCFPHLKN** 360
GKGSQLEANKKAM+IQCK+CMQTFICTTSE KC+EHAEA+HPK D+ CFPHLK **
Sbjct: 346 GKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPHLKK** 176
Score = 28.6 bits (56), Expect(2) = 2e-029
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +1 / -3
Query: 136 NAQKSKMARERNAEKNK 186
NAQKS MAR +N EK K
Sbjct: 403 NAQKSAMARAKNLEKAK 353
>gb|BP583966.1|BP583966 BP583966 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-44-E14 3',
mRNA sequence
Length = 429
Score = 120 bits (256), Expect(2) = 8e-029
Identities = 46/57 (80%), Positives = 51/57 (89%)
Frame = +1 / -1
Query: 190 GKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEARHPKNDLYQCFPHLKN** 360
GKGSQLEANKKAM+IQCK+CMQTFICTTSE KC+EH EA+HPK D+ CFPHLK **
Sbjct: 369 GKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHPEAKHPKADVVACFPHLKK** 199
Score = 29.0 bits (57), Expect(2) = 8e-029
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +1 / -1
Query: 133 GNAQKSKMARERNAEKNK 186
GN QKS MAR +N EK K
Sbjct: 429 GNPQKSAMARPKNLEKAK 376
>gb|BP588279.1|BP588279 BP588279 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-45-L11 3',
mRNA sequence
Length = 429
Score = 122 bits (261), Expect(2) = 1e-028
Identities = 47/57 (82%), Positives = 52/57 (91%)
Frame = +1 / -3
Query: 190 GKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEARHPKNDLYQCFPHLKN** 360
GKGSQLEANKKAM+IQCK+CMQTFICTTSE KC+EHAEA+HPK D+ CFPHLK **
Sbjct: 373 GKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPHLKK** 203
Score = 25.8 bits (50), Expect(2) = 1e-028
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +1 / -3
Query: 139 AQKSKMARERNAEKNK 186
AQKS MAR +N EK K
Sbjct: 427 AQKSAMARAKNLEKAK 380
>gb|CD531919.1|CD531919 12J01 Arabidopsis Leaf Senescence Library Arabidopsis thaliana cDNA
3', mRNA sequence
Length = 384
Score = 122 bits (261), Expect(3) = 2e-028
Identities = 47/57 (82%), Positives = 52/57 (91%)
Frame = +1 / +1
Query: 190 GKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEARHPKNDLYQCFPHLKN** 360
GKGSQLEANKKAM+IQCK+CMQTFICTTSE KC+EHAEA+HPK D+ CFPHLK **
Sbjct: 52 GKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPHLKK** 222
Score = 24.0 bits (46), Expect(3) = 2e-028
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1 / +1
Query: 142 QKSKMARERNAEKNK 186
QKS MAR +N EK K
Sbjct: 1 QKSAMARAKNLEKAK 45
Score = 18.5 bits (34), Expect(3) = 2e-028
Identities = 7/20 (35%), Positives = 9/20 (45%)
Frame = +2 / +1
Query: 374 MLCSAKRQVLHIYIYTLCVN 433
M S RQ+L + C N
Sbjct: 283 MFVSKSRQILWFLFLSTCFN 342
>gb|BP591915.1|BP591915 BP591915 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-16-H05 3',
mRNA sequence
Length = 439
Score = 118 bits (252), Expect(2) = 2e-028
Identities = 46/57 (80%), Positives = 51/57 (89%)
Frame = +1 / -1
Query: 190 GKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEARHPKNDLYQCFPHLKN** 360
GK SQLEANKKAM+IQCK+CMQTFICTTSE KC+EHAEA+HPK D+ CFPHLK **
Sbjct: 370 GKVSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPHLKK** 200
Score = 29.5 bits (58), Expect(2) = 2e-028
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +1 / -1
Query: 127 GGGNAQKSKMARERNAEKNK 186
G NAQKS MAR +N EK K
Sbjct: 436 GWRNAQKSAMARAKNLEKAK 377
>gb|BP589484.1|BP589484 BP589484 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-49-O22 3',
mRNA sequence
Length = 429
Score = 121 bits (259), Expect(2) = 3e-028
Identities = 47/57 (82%), Positives = 51/57 (89%)
Frame = +1 / -3
Query: 190 GKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEARHPKNDLYQCFPHLKN** 360
GKGSQLEANKKAM+IQCK+CMQTFICTTSE KC+EHAEA HPK D+ CFPHLK **
Sbjct: 373 GKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEANHPKADVVACFPHLKK** 203
Score = 25.8 bits (50), Expect(2) = 3e-028
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +1 / -3
Query: 139 AQKSKMARERNAEKNK 186
AQKS MAR +N EK K
Sbjct: 427 AQKSAMARAKNLEKAK 380
>gb|BP853998.1|BP853998 BP853998 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-60-C07 5',
mRNA sequence
Length = 395
Score = 105 bits (223), Expect(2) = 2e-027
Identities = 38/48 (79%), Positives = 43/48 (89%)
Frame = +1 / +3
Query: 202 QLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEARHPKNDLYQCFPH 345
Q EANKKAM+IQCK+CMQTFICTTSE KC+EHAEA+HPK D+ CFPH
Sbjct: 156 QWEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPH 299
Score = 39.1 bits (79), Expect(2) = 2e-027
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = +1 / +1
Query: 124 MGGGNAQKSKMARERNAEKNK 186
MGGGNAQKS MAR +N EK K
Sbjct: 76 MGGGNAQKSAMARAKNLEKAK 138
>gb|BE038151.1|BE038151 AA09E09 AA Arabidopsis thaliana cDNA 5', mRNA sequence
Length = 550
Score = 123 bits (264), Expect = 4e-027
Identities = 49/78 (62%), Positives = 58/78 (74%)
Frame = +1 / +1
Query: 127 GGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEA 306
GG + + + + GKGSQLEANKKAM+IQCK+CMQTFICTTSE KC+EHAEA
Sbjct: 94 GGNAQKSAMARAKNLEKAKAAGKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEA 273
Query: 307 RHPKNDLYQCFPHLKN** 360
+HPK D+ CFPHLK **
Sbjct: 274 KHPKADVVACFPHLKK** 327
>gb|BE039244.1|BE039244 AC01A08 AC Arabidopsis thaliana cDNA 5', mRNA sequence
Length = 470
Score = 123 bits (264), Expect = 4e-027
Identities = 49/78 (62%), Positives = 58/78 (74%)
Frame = +1 / +2
Query: 127 GGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEA 306
GG + + + + GKGSQLEANKKAM+IQCK+CMQTFICTTSE KC+EHAEA
Sbjct: 20 GGNAQKSAMARAKNLEKAKAAGKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEA 199
Query: 307 RHPKNDLYQCFPHLKN** 360
+HPK D+ CFPHLK **
Sbjct: 200 KHPKADVVACFPHLKK** 253
>gb|AV824639.1|AV824639 AV824639 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-74-C05 5',
mRNA sequence
Length = 481
Score = 123 bits (264), Expect = 4e-027
Identities = 49/78 (62%), Positives = 58/78 (74%)
Frame = +1 / +3
Query: 127 GGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEA 306
GG + + + + GKGSQLEANKKAM+IQCK+CMQTFICTTSE KC+EHAEA
Sbjct: 84 GGNAQKSAMARAKNLEKAKAAGKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEA 263
Query: 307 RHPKNDLYQCFPHLKN** 360
+HPK D+ CFPHLK **
Sbjct: 264 KHPKADVVACFPHLKK** 317
>gb|CB263473.1|CB263473 20-E9724-008-016-H06-pBl2 MPIZ-ADIS-008 Arabidopsis thaliana cDNA
clone MPIZp767H0616Q 5-PRIME, mRNA sequence
Length = 483
Score = 123 bits (264), Expect = 4e-027
Identities = 49/78 (62%), Positives = 58/78 (74%)
Frame = +1 / -2
Query: 127 GGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEA 306
GG + + + + GKGSQLEANKKAM+IQCK+CMQTFICTTSE KC+EHAEA
Sbjct: 425 GGNAQKSAMARAKNLEKAKAAGKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEA 246
Query: 307 RHPKNDLYQCFPHLKN** 360
+HPK D+ CFPHLK **
Sbjct: 245 KHPKADVVACFPHLKK** 192
>gb|CD534117.1|CD534117 35L2 Arabidopsis Leaf Senescence Library Arabidopsis thaliana cDNA
3', mRNA sequence
Length = 466
Score = 123 bits (264), Expect = 4e-027
Identities = 49/78 (62%), Positives = 58/78 (74%)
Frame = +1 / +2
Query: 127 GGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEA 306
GG + + + + GKGSQLEANKKAM+IQCK+CMQTFICTTSE KC+EHAEA
Sbjct: 32 GGNAQKSAMARAKNLEKAKAAGKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEA 211
Query: 307 RHPKNDLYQCFPHLKN** 360
+HPK D+ CFPHLK **
Sbjct: 212 KHPKADVVACFPHLKK** 265
>gb|BP560607.2|BP560607 BP560607 RAFL4 Arabidopsis thaliana cDNA clone RAFL04-14-I04 5',
mRNA sequence
Length = 680
Score = 123 bits (264), Expect = 4e-027
Identities = 49/78 (62%), Positives = 58/78 (74%)
Frame = +1 / +3
Query: 127 GGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEA 306
GG + + + + GKGSQLEANKKAM+IQCK+CMQTFICTTSE KC+EHAEA
Sbjct: 123 GGNAQKSAMARAKNLEKAKAAGKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEA 302
Query: 307 RHPKNDLYQCFPHLKN** 360
+HPK D+ CFPHLK **
Sbjct: 303 KHPKADVVACFPHLKK** 356
>gb|BP809885.1|BP809885 BP809885 RAFL16 Arabidopsis thaliana cDNA clone RAFL24-23-L20 5',
mRNA sequence
Length = 399
Score = 123 bits (264), Expect = 4e-027
Identities = 49/78 (62%), Positives = 58/78 (74%)
Frame = +1 / +3
Query: 127 GGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEA 306
GG + + + + GKGSQLEANKKAM+IQCK+CMQTFICTTSE KC+EHAEA
Sbjct: 114 GGNAQKSAMARAKNLEKAKAAGKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEA 293
Query: 307 RHPKNDLYQCFPHLKN** 360
+HPK D+ CFPHLK **
Sbjct: 294 KHPKADVVACFPHLKK** 347
>gb|BP813417.1|BP813417 BP813417 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-06-G01 5',
mRNA sequence
Length = 392
Score = 123 bits (264), Expect = 4e-027
Identities = 49/78 (62%), Positives = 58/78 (74%)
Frame = +1 / +1
Query: 127 GGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEA 306
GG + + + + GKGSQLEANKKAM+IQCK+CMQTFICTTSE KC+EHAEA
Sbjct: 106 GGNAQKSAMARAKNLEKAKAAGKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEA 285
Query: 307 RHPKNDLYQCFPHLKN** 360
+HPK D+ CFPHLK **
Sbjct: 286 KHPKADVVACFPHLKK** 339
>gb|BP834741.1|BP834741 BP834741 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-11-D24 5',
mRNA sequence
Length = 378
Score = 123 bits (264), Expect = 4e-027
Identities = 49/78 (62%), Positives = 58/78 (74%)
Frame = +1 / +3
Query: 127 GGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEA 306
GG + + + + GKGSQLEANKKAM+IQCK+CMQTFICTTSE KC+EHAEA
Sbjct: 78 GGNAQKSAMARAKNLEKAKAAGKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEA 257
Query: 307 RHPKNDLYQCFPHLKN** 360
+HPK D+ CFPHLK **
Sbjct: 258 KHPKADVVACFPHLKK** 311
>gb|AY052343.1| Arabidopsis thaliana At2g23090/F21P24.15 mRNA, complete cds
Length = 480
Score = 123 bits (264), Expect = 4e-027
Identities = 49/78 (62%), Positives = 58/78 (74%)
Frame = +1 / +2
Query: 127 GGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEA 306
GG + + + + GKGSQLEANKKAM+IQCK+CMQTFICTTSE KC+EHAEA
Sbjct: 83 GGNAQKSAMARAKNLEKAKAAGKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEA 262
Query: 307 RHPKNDLYQCFPHLKN** 360
+HPK D+ CFPHLK **
Sbjct: 263 KHPKADVVACFPHLKK** 316
>gb|AY056377.1| Arabidopsis thaliana At2g23090/F21P24.15 mRNA, complete cds
Length = 475
Score = 123 bits (264), Expect = 4e-027
Identities = 49/78 (62%), Positives = 58/78 (74%)
Frame = +1 / +2
Query: 127 GGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEA 306
GG + + + + GKGSQLEANKKAM+IQCK+CMQTFICTTSE KC+EHAEA
Sbjct: 80 GGNAQKSAMARAKNLEKAKAAGKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEA 259
Query: 307 RHPKNDLYQCFPHLKN** 360
+HPK D+ CFPHLK **
Sbjct: 260 KHPKADVVACFPHLKK** 313
>gb|AY142543.1| Arabidopsis thaliana clone RAFL04-14-I04 (R09825) mRNA sequence
Length = 2116
Score = 123 bits (264), Expect = 4e-027
Identities = 49/78 (62%), Positives = 58/78 (74%)
Frame = +1 / +3
Query: 127 GGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEA 306
GG + + + + GKGSQLEANKKAM+IQCK+CMQTFICTTSE KC+EHAEA
Sbjct: 123 GGNAQKSAMARAKNLEKAKAAGKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEA 302
Query: 307 RHPKNDLYQCFPHLKN** 360
+HPK D+ CFPHLK **
Sbjct: 303 KHPKADVVACFPHLKK** 356
>gb|AY085311.1| Arabidopsis thaliana clone 14468 mRNA, complete sequence
Length = 571
Score = 123 bits (264), Expect = 4e-027
Identities = 49/78 (62%), Positives = 58/78 (74%)
Frame = +1 / +1
Query: 127 GGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEA 306
GG + + + + GKGSQLEANKKAM+IQCK+CMQTFICTTSE KC+EHAEA
Sbjct: 142 GGNAQKSAMARAKNLEKAKAAGKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEA 321
Query: 307 RHPKNDLYQCFPHLKN** 360
+HPK D+ CFPHLK **
Sbjct: 322 KHPKADVVACFPHLKK** 375
>emb|BX819905.1|CNS0A9GG Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS46ZE05 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 487
Score = 123 bits (264), Expect = 4e-027
Identities = 49/78 (62%), Positives = 58/78 (74%)
Frame = +1 / +2
Query: 127 GGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEA 306
GG + + + + GKGSQLEANKKAM+IQCK+CMQTFICTTSE KC+EHAEA
Sbjct: 50 GGNAQKSAMARAKNLEKAKAAGKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEA 229
Query: 307 RHPKNDLYQCFPHLKN** 360
+HPK D+ CFPHLK **
Sbjct: 230 KHPKADVVACFPHLKK** 283
>emb|BX821290.1|CNS0A98Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL32ZB02 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 535
Score = 123 bits (264), Expect = 4e-027
Identities = 49/78 (62%), Positives = 58/78 (74%)
Frame = +1 / +3
Query: 127 GGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEA 306
GG + + + + GKGSQLEANKKAM+IQCK+CMQTFICTTSE KC+EHAEA
Sbjct: 132 GGNAQKSAMARAKNLEKAKAAGKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEA 311
Query: 307 RHPKNDLYQCFPHLKN** 360
+HPK D+ CFPHLK **
Sbjct: 312 KHPKADVVACFPHLKK** 365
>ref|NM_127873.3| Arabidopsis thaliana unknown protein AT2G23090 mRNA, complete cds
Length = 580
Score = 123 bits (264), Expect = 4e-027
Identities = 49/78 (62%), Positives = 58/78 (74%)
Frame = +1 / +2
Query: 127 GGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEA 306
GG + + + + GKGSQLEANKKAM+IQCK+CMQTFICTTSE KC+EHAEA
Sbjct: 143 GGNAQKSAMARAKNLEKAKAAGKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEA 322
Query: 307 RHPKNDLYQCFPHLKN** 360
+HPK D+ CFPHLK **
Sbjct: 323 KHPKADVVACFPHLKK** 376
>gb|AY143800.1| Arabidopsis thaliana At2g23090/F21P24.15 mRNA, complete cds
Length = 237
Score = 123 bits (263), Expect = 5e-027
Identities = 48/77 (62%), Positives = 57/77 (74%)
Frame = +1 / +1
Query: 127 GGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEA 306
GG + + + + GKGSQLEANKKAM+IQCK+CMQTFICTTSE KC+EHAEA
Sbjct: 7 GGNAQKSAMARAKNLEKAKAAGKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEA 186
Query: 307 RHPKNDLYQCFPHLKN* 357
+HPK D+ CFPHLK *
Sbjct: 187 KHPKADVVACFPHLKK* 237
>emb|BX821559.1|CNS0A96B Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL53ZC05 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 485
Score = 122 bits (262), Expect = 7e-027
Identities = 49/78 (62%), Positives = 57/78 (73%)
Frame = +1 / +2
Query: 127 GGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEA 306
GG + + + + GKGSQLEANKKAM+IQCK+CMQTFICTTSE KC+EHAEA
Sbjct: 50 GGNAQKSAMARAKNLEKAKAAGKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEA 229
Query: 307 RHPKNDLYQCFPHLKN** 360
HPK D+ CFPHLK **
Sbjct: 230 NHPKADVVACFPHLKK** 283
>gb|BP805505.1|BP805505 BP805505 RAFL16 Arabidopsis thaliana cDNA clone RAFL24-06-D07 5',
mRNA sequence
Length = 430
Score = 102 bits (217), Expect(2) = 8e-027
Identities = 41/56 (73%), Positives = 47/56 (83%)
Frame = +1 / +3
Query: 193 KGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEARHPKNDLYQCFPHLKN** 360
K +Q EANKKAM+IQCK+ MQTFICTTSE KC+E AEA+HPK D+ CFPHLK **
Sbjct: 147 KVAQWEANKKAMSIQCKVRMQTFICTTSEVKCREQAEAKHPKADVVACFPHLKK** 314
Score = 40.0 bits (81), Expect(2) = 8e-027
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +1 / +2
Query: 124 MGGGNAQKSKMARERNAEKNK 186
MGGGNAQKS MAR +N+EK K
Sbjct: 74 MGGGNAQKSAMARAKNSEKAK 136
>gb|AV787104.1|AV787104 AV787104 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-74-B18 3',
mRNA sequence
Length = 409
Score = 122 bits (261), Expect = 1e-026
Identities = 47/57 (82%), Positives = 52/57 (91%)
Frame = +1 / -1
Query: 190 GKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEARHPKNDLYQCFPHLKN** 360
GKGSQLEANKKAM+IQCK+CMQTFICTTSE KC+EHAEA+HPK D+ CFPHLK **
Sbjct: 373 GKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPHLKK** 203
>gb|BP614016.1|BP614016 BP614016 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-95-E17 3',
mRNA sequence
Length = 417
Score = 121 bits (259), Expect = 2e-026
Identities = 48/78 (61%), Positives = 57/78 (73%)
Frame = +1 / -1
Query: 127 GGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEA 306
GG + + + + GKGSQLEANKKAM+IQCK+CMQTFICTTSE KC+EH EA
Sbjct: 396 GGNAQKSAMARAKNLEKAKAAGKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHPEA 217
Query: 307 RHPKNDLYQCFPHLKN** 360
+HPK D+ CFPHLK **
Sbjct: 216 KHPKADVVACFPHLKK** 163
>gb|BP802211.1|BP802211 BP802211 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-23-G12 5',
mRNA sequence
Length = 368
Score = 121 bits (258), Expect = 3e-026
Identities = 48/78 (61%), Positives = 57/78 (73%)
Frame = +1 / +3
Query: 127 GGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEA 306
GG + + + + GKGSQLEA KKAM+IQCK+CMQTFICTTSE KC+EHAEA
Sbjct: 78 GGNAQKSAMARAKNLEKAKAAGKGSQLEAKKKAMSIQCKVCMQTFICTTSEVKCREHAEA 257
Query: 307 RHPKNDLYQCFPHLKN** 360
+HPK D+ CFPHLK **
Sbjct: 258 KHPKADVVACFPHLKK** 311
>gb|BP840268.1|BP840268 BP840268 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-29-K20 5',
mRNA sequence
Length = 392
Score = 121 bits (258), Expect = 3e-026
Identities = 48/78 (61%), Positives = 57/78 (73%)
Frame = +1 / +1
Query: 127 GGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEA 306
GG + + + + GKGSQ EANKKAM+IQCK+CMQTFICTTSE KC+EHAEA
Sbjct: 82 GGNAQKSAMARAKNLEKAKAAGKGSQWEANKKAMSIQCKVCMQTFICTTSEVKCREHAEA 261
Query: 307 RHPKNDLYQCFPHLKN** 360
+HPK D+ CFPHLK **
Sbjct: 262 KHPKADVVACFPHLKK** 315
>gb|AV828766.1|AV828766 AV828766 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-32-P22 5',
mRNA sequence
Length = 342
Score = 119 bits (255), Expect = 7e-026
Identities = 48/78 (61%), Positives = 57/78 (73%)
Frame = +1 / +3
Query: 127 GGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEA 306
GG + + + + GKGSQLEANKKAM+IQCK+CMQTFICTTSE KC+EHAEA
Sbjct: 78 GGNAQKSAMARAKNLEKAKAAGKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEA 257
Query: 307 RHPKNDLYQCFPHLKN** 360
+H K D+ CFPHLK **
Sbjct: 258 KHXKADVVACFPHLKK** 311
>gb|BP821343.1|BP821343 BP821343 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-57-K19 5',
mRNA sequence
Length = 395
Score = 118 bits (253), Expect = 1e-025
Identities = 45/73 (61%), Positives = 54/73 (73%)
Frame = +1 / +1
Query: 127 GGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEA 306
GG + + + + GKGSQLEANKKAM+IQCK+CMQTFICTTSE KC+EHAEA
Sbjct: 40 GGNAQKSAMARAKNLEKAKAAGKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEA 219
Query: 307 RHPKNDLYQCFPH 345
+HPK D+ CFPH
Sbjct: 220 KHPKADVVACFPH 258
>gb|BP829420.1|BP829420 BP829420 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-82-A10 5',
mRNA sequence
Length = 374
Score = 98.7 bits (209), Expect(2) = 2e-025
Identities = 37/56 (66%), Positives = 45/56 (80%)
Frame = +1 / +2
Query: 193 KGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEARHPKNDLYQCFPHLKN** 360
K + + +K M+IQCK+CMQTFICTTSE KC+EHAEA+HPK D+ CFPHLK **
Sbjct: 146 KVANWKLTRKPMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPHLKK** 313
Score = 39.1 bits (79), Expect(2) = 2e-025
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = +1 / +1
Query: 124 MGGGNAQKSKMARERNAEKNK 186
MGGGNAQKS MAR +N EK K
Sbjct: 73 MGGGNAQKSAMARAKNLEKAK 135
>gb|BP638604.1|BP638604 BP638604 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-44-C23 3',
mRNA sequence
Length = 380
Score = 118 bits (253), Expect(2) = 2e-025
Identities = 45/57 (78%), Positives = 51/57 (89%)
Frame = +1 / -1
Query: 190 GKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEARHPKNDLYQCFPHLKN** 360
GKGSQLEANKKAM+IQCK+C+QTFICTTSE KC+EHAE +HPK D+ CFPHLK **
Sbjct: 371 GKGSQLEANKKAMSIQCKVCIQTFICTTSEVKCREHAEVKHPKADVVACFPHLKK** 201
Score = 18.5 bits (34), Expect(2) = 2e-025
Identities = 7/20 (35%), Positives = 9/20 (45%)
Frame = +2 / -1
Query: 374 MLCSAKRQVLHIYIYTLCVN 433
M S RQ+L + C N
Sbjct: 140 MFVSKSRQILWFLFLSTCFN 81
>gb|BP591843.1|BP591843 BP591843 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-16-D15 3',
mRNA sequence
Length = 439
Score = 117 bits (251), Expect = 2e-025
Identities = 47/78 (60%), Positives = 57/78 (73%)
Frame = +1 / -1
Query: 127 GGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEA 306
GG + + + + GK SQLEANKKA++IQCK+CMQTFICTTSE KC+EHAEA
Sbjct: 436 GGNAQKSAMARAKNLEKAKAAGKVSQLEANKKAISIQCKVCMQTFICTTSEVKCREHAEA 257
Query: 307 RHPKNDLYQCFPHLKN** 360
+HPK D+ CFPHLK **
Sbjct: 256 KHPKADVVACFPHLKK** 203
>gb|AV522137.1|AV522137 AV522137 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZ73d03F 3', mRNA
sequence
Length = 464
Score = 117 bits (250), Expect = 3e-025
Identities = 47/78 (60%), Positives = 56/78 (71%)
Frame = +1 / -2
Query: 127 GGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEA 306
GG + + + + GKGSQLEANKKAM+IQCK+CMQTFIC TSE KC+EHAEA
Sbjct: 418 GGNAQKSAMARAKNLEKAKAAGKGSQLEANKKAMSIQCKVCMQTFICPTSEVKCREHAEA 239
Query: 307 RHPKNDLYQCFPHLKN** 360
+HPK D+ CFP LK **
Sbjct: 238 KHPKTDVVACFPPLKK** 185
>gb|BP835536.1|BP835536 BP835536 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-13-L02 5',
mRNA sequence
Length = 389
Score = 108 bits (231), Expect(2) = 4e-025
Identities = 42/53 (79%), Positives = 47/53 (88%)
Frame = +1 / +3
Query: 202 QLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEARHPKNDLYQCFPHLKN** 360
QLEANKKAM+IQCK+CMQTFICTTSE KC+EHAEA+HPK D+ FPHLK **
Sbjct: 186 QLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVAAFPHLKK** 344
Score = 28.1 bits (55), Expect(2) = 4e-025
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +1 / +2
Query: 124 MGGGNAQKSKMA 159
MGGGNAQKS MA
Sbjct: 110 MGGGNAQKSAMA 145
>gb|BP854157.1|BP854157 BP854157 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-60-K15 5',
mRNA sequence
Length = 394
Score = 116 bits (249), Expect = 4e-025
Identities = 47/78 (60%), Positives = 57/78 (73%)
Frame = +1 / +3
Query: 127 GGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEA 306
GG + + + + GKGSQLEANKKAM+IQCK+CMQTFICTTSE KC+EHAEA
Sbjct: 141 GGNAQKSAMARAKNLEKAKAAGKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEA 320
Query: 307 RHPKNDLYQCFPHLKN** 360
++PK D+ CFP LK **
Sbjct: 321 KNPKADVVACFPQLKK** 374
>gb|BP847952.1|BP847952 BP847952 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-03-L05 5',
mRNA sequence
Length = 390
Score = 111 bits (238), Expect(2) = 5e-025
Identities = 42/52 (80%), Positives = 47/52 (90%)
Frame = +1 / +2
Query: 190 GKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEARHPKNDLYQCFPH 345
GKGSQLEANKKAM+IQCK+ MQTFICTTSE KC+EHAEA+HPK D+ CFPH
Sbjct: 152 GKGSQLEANKKAMSIQCKVGMQTFICTTSEVKCREHAEAKHPKADVVACFPH 307
Score = 24.4 bits (47), Expect(2) = 5e-025
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +1 / +1
Query: 124 MGGGNAQKS 150
MGGGNAQKS
Sbjct: 82 MGGGNAQKS 108
>gb|BP602671.1|BP602671 BP602671 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-55-J04 3',
mRNA sequence
Length = 405
Score = 116 bits (248), Expect = 6e-025
Identities = 47/78 (60%), Positives = 56/78 (71%)
Frame = +1 / -1
Query: 127 GGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEA 306
GG + + + GKGSQLEANKKA++IQCK+CMQTFICTTSE K +EHAEA
Sbjct: 375 GGNAQKSPMARAKNLEKAKAAGKGSQLEANKKAISIQCKVCMQTFICTTSEVKSREHAEA 196
Query: 307 RHPKNDLYQCFPHLKN** 360
+HPK D+ CFPHLK **
Sbjct: 195 KHPKADVVACFPHLKK** 142
>gb|BP829505.1|BP829505 BP829505 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-82-E16 5',
mRNA sequence
Length = 383
Score = 114 bits (244), Expect = 2e-024
Identities = 44/71 (61%), Positives = 53/71 (74%)
Frame = +1 / +2
Query: 127 GGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEA 306
GG + + + + GGKGSQLEANKKAM+IQCK+CMQTFICTTSE KC+EHAEA
Sbjct: 110 GGNAQKSAMARAKNLEKAKAGGKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEA 289
Query: 307 RHPKNDLYQCF 339
+HPK D+ CF
Sbjct: 290 KHPKADVVACF 322
>gb|AI999629.1|AI999629 701556759 A. thaliana, Columbia Col-0, rosette-3 Arabidopsis
thaliana cDNA clone 701556759, mRNA sequence
Length = 462
Score = 113 bits (242), Expect = 4e-024
Identities = 46/78 (58%), Positives = 55/78 (70%)
Frame = +1 / -3
Query: 127 GGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEA 306
GG + + + + GKGSQLEANKKAM+IQ K+C QTFICTTSE KC+EHAEA
Sbjct: 415 GGNAQKSAMARAKNLEKAKAAGKGSQLEANKKAMSIQXKVCXQTFICTTSEVKCREHAEA 236
Query: 307 RHPKNDLYQCFPHLKN** 360
+HPK D+ CFPH K **
Sbjct: 235 KHPKADVVACFPHXKK** 182
>gb|AV787108.1|AV787108 AV787108 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-74-C05 3',
mRNA sequence
Length = 401
Score = 113 bits (242), Expect = 4e-024
Identities = 44/57 (77%), Positives = 51/57 (89%)
Frame = +1 / -1
Query: 190 GKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEARHPKNDLYQCFPHLKN** 360
GK SQLE+NKKAM+IQCK+CMQTFICTTSE KC+EHAEA+HPK D++ FPHLK **
Sbjct: 332 GKVSQLESNKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVFAFFPHLKK** 162
>gb|BP832596.1|BP832596 BP832596 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-93-C11 5',
mRNA sequence
Length = 398
Score = 113 bits (242), Expect = 4e-024
Identities = 47/78 (60%), Positives = 56/78 (71%)
Frame = +1 / +2
Query: 127 GGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEA 306
GG + + + + GKGSQLEANKKAM+IQCK+ MQTFICTTSE KC+EHAEA
Sbjct: 80 GGNAQKSAMARAKNLEKAKAAGKGSQLEANKKAMSIQCKVGMQTFICTTSEVKCREHAEA 259
Query: 307 RHPKNDLYQCFPHLKN** 360
+HPK D+ CF HLK **
Sbjct: 260 KHPKADVVACFLHLKK** 313
>gb|BP602416.1|BP602416 BP602416 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-54-K14 3',
mRNA sequence
Length = 421
Score = 109 bits (232), Expect(2) = 6e-024
Identities = 41/56 (73%), Positives = 49/56 (87%)
Frame = +1 / -3
Query: 193 KGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEARHPKNDLYQCFPHLKN** 360
K + +ANKKAM+IQCK+CMQTFICTTSE KC+EHAEA+HPK D++ CFPHLK **
Sbjct: 359 KVANWKANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVFACFPHLKK** 192
Score = 23.5 bits (45), Expect(2) = 6e-024
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1 / -1
Query: 136 NAQKSKMARERNAEK 180
NAQKS MAR +N +
Sbjct: 418 NAQKSAMARAKNLRR 374
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 986,405,275
Number of Sequences: 1013581
Number of extensions: 12373231
Number of successful extensions: 159723
Number of sequences better than 1.0e-020: 71
length of database: 302,980,290
effective HSP length: 55
effective length of database: 247,233,335
effective search space used: 36837766915
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)