TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 2850725.2.1
         (847 letters)

Database: At_nucl_with_EST.fasta 
           1,013,581 sequences; 908,940,872 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NM_104080.1|  Arabidopsis thaliana O-methyltransferase A...    89   3e-021
ref|NM_202275.1|  Arabidopsis thaliana O-methyltransferase A...    89   3e-021

>ref|NM_104080.1| Arabidopsis thaliana O-methyltransferase AT1G51990 transcript
           variant AT1G51990.1 mRNA, complete cds
          Length = 1092

 Score = 88.6 bits (187), Expect(2) = 3e-021
 Identities = 33/77 (42%), Positives = 50/77 (64%)
 Frame = -1 / +1

                                                                       
Query: 826 GTTGNSLAKAFPLIKITVLDLPQEIRKIPADGVVNYVGGDMFKSIPRAQMVLLKMVLHHW 647
           G+    +   +P IK    DLP  +++ P    V ++GGDMF  IPR +++L+K +LH W
Sbjct: 628 GSNLAQILSKYPHIKGINFDLPHIVKEAPQIHGVEHIGGDMFDEIPRGEVILMKWILHDW 807

                            
Query: 646 SDEDCVKILANCRKAIP 596
           +DE CV+IL NC+KA+P
Sbjct: 808 NDEKCVEILKNCKKALP 858




 Score = 35.4 bits (71), Expect(2) = 3e-021
 Identities = 14/43 (32%), Positives = 26/43 (60%)
 Frame = -1 / +1

                                                       
Query: 496  MMLMKGGRQRDVNDWRDLIQKAGFSDYKLLKKFGARGVLEIYP 368
            M L  GG++R   ++ DL ++AGF   K++    +  ++E+YP
Sbjct: 958  MSLTSGGKERTKKEFEDLAKEAGFKLPKIIYGAYSYWIIELYP 1086



>ref|NM_202275.1| Arabidopsis thaliana O-methyltransferase AT1G51990 transcript
           variant AT1G51990.2 mRNA, complete cds
          Length = 1092

 Score = 88.6 bits (187), Expect(2) = 3e-021
 Identities = 33/77 (42%), Positives = 50/77 (64%)
 Frame = -1 / +1

                                                                       
Query: 826 GTTGNSLAKAFPLIKITVLDLPQEIRKIPADGVVNYVGGDMFKSIPRAQMVLLKMVLHHW 647
           G+    +   +P IK    DLP  +++ P    V ++GGDMF  IPR +++L+K +LH W
Sbjct: 628 GSNLAQILSKYPHIKGINFDLPHIVKEAPQIHGVEHIGGDMFDEIPRGEVILMKWILHDW 807

                            
Query: 646 SDEDCVKILANCRKAIP 596
           +DE CV+IL NC+KA+P
Sbjct: 808 NDEKCVEILKNCKKALP 858




 Score = 35.4 bits (71), Expect(2) = 3e-021
 Identities = 14/43 (32%), Positives = 26/43 (60%)
 Frame = -1 / +1

                                                       
Query: 496  MMLMKGGRQRDVNDWRDLIQKAGFSDYKLLKKFGARGVLEIYP 368
            M L  GG++R   ++ DL ++AGF   K++    +  ++E+YP
Sbjct: 958  MSLTSGGKERTKKEFEDLAKEAGFKLPKIIYGAYSYWIIELYP 1086



  Database: At_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:09 PM
  Number of letters in database: 908,940,872
  Number of sequences in database:  1,013,581
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 1,838,184,604
Number of Sequences: 1013581
Number of extensions: 26121434
Number of successful extensions: 156760
Number of sequences better than 1.0e-020: 2
length of database: 302,980,290
effective HSP length: 56
effective length of database: 246,219,754
effective search space used: 55399444650
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)