TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2750929.2.1
(583 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AV821962.1|AV821962 AV821962 RAFL4 Arabidopsis thaliana ... 127 3e-028
gb|AV823313.1|AV823313 AV823313 RAFL5 Arabidopsis thaliana ... 127 3e-028
gb|CB263350.1|CB263350 24-E9723-008-016-P05-pBl2 MPIZ-ADIS-... 127 3e-028
gb|DR750039.1|DR750039 79-L021127-065-005-G10-SeLA MPIZ-ADI... 127 3e-028
gb|DR750789.1|DR750789 39-L021127-065-005-G05-SeLA MPIZ-ADI... 127 3e-028
gb|AF291817.1|AF291817 Arabidopsis thaliana MYR1 (MYR1) mRN... 127 3e-028
gb|AY042878.1| Arabidopsis thaliana transfactor-like protei... 127 3e-028
gb|AY074563.1| Arabidopsis thaliana AT3g04030/T11I18_14 mRN... 127 3e-028
gb|AY143915.1| Arabidopsis thaliana At3g04030/T11I18_14 mRN... 127 3e-028
gb|BT003421.1| Arabidopsis thaliana transfactor-like protei... 127 3e-028
emb|BX829489.1|CNS09YUW Arabidopsis thaliana Full-length cD... 127 3e-028
emb|BX831267.1|CNS0A0UB Arabidopsis thaliana Full-length cD... 127 3e-028
emb|BX830152.1|CNS0A1FP Arabidopsis thaliana Full-length cD... 127 3e-028
ref|NM_111274.3| Arabidopsis thaliana transcription factor ... 127 3e-028
ref|NM_121829.2| Arabidopsis thaliana MYR1; transcription f... 127 3e-028
ref|NM_180511.1| Arabidopsis thaliana MYR1; transcription f... 127 3e-028
ref|NM_203068.1| Arabidopsis thaliana MYR1 AT5G18240 (MYR1)... 127 3e-028
ref|NM_203069.1| Arabidopsis thaliana MYR1 AT5G18240 (MYR1)... 127 3e-028
ref|NM_203070.1| Arabidopsis thaliana MYR1 AT5G18240 (MYR1)... 127 3e-028
emb|BX830989.1|CNS0A0SJ Arabidopsis thaliana Full-length cD... 126 7e-028
gb|BP841506.1|BP841506 BP841506 RAFL21 Arabidopsis thaliana... 122 1e-026
gb|BE530060.1|BE530060 M76B02STM Arabidopsis developing see... 118 1e-025
gb|AV829855.1|AV829855 AV829855 RAFL9 Arabidopsis thaliana ... 118 1e-025
gb|DR750765.1|DR750765 38-L021127-065-005-F05-SeLA MPIZ-ADI... 118 1e-025
ref|NM_179574.1| Arabidopsis thaliana APL (ALTERED PHLOEM D... 118 1e-025
gb|AV824035.1|AV824035 AV824035 RAFL6 Arabidopsis thaliana ... 118 2e-025
gb|AV825695.1|AV825695 AV825695 RAFL7 Arabidopsis thaliana ... 118 2e-025
gb|CB255826.1|CB255826 19-E011172-027-005-E05-T7R MPIZ-ADIS... 118 2e-025
gb|AV565361.1|AV565361 AV565361 Arabidopsis thaliana green ... 118 2e-025
gb|CK119230.1|CK119230 213g09.p1 AtM1 Arabidopsis thaliana ... 118 2e-025
gb|BP560992.1|BP560992 BP560992 RAFL5 Arabidopsis thaliana ... 118 2e-025
gb|BP798435.1|BP798435 BP798435 RAFL14 Arabidopsis thaliana... 118 2e-025
gb|DR750293.1|DR750293 64-L021127-065-005-H08-SeLA MPIZ-ADI... 118 2e-025
gb|AY050355.1| Arabidopsis thaliana AT3g24120/MUJ8_3 mRNA, ... 118 2e-025
gb|AY081310.1| Arabidopsis thaliana putative protein (At4g1... 118 2e-025
gb|AY094046.1| Arabidopsis thaliana AT3g24120/MUJ8_3 mRNA, ... 118 2e-025
gb|AY087771.1| Arabidopsis thaliana clone 38327 mRNA, compl... 118 2e-025
gb|AY088428.1| Arabidopsis thaliana clone 6626 mRNA, comple... 118 2e-025
emb|BX826975.1|CNS0A46N Arabidopsis thaliana Full-length cD... 118 2e-025
emb|BX824265.1|CNS0A4TJ Arabidopsis thaliana Full-length cD... 118 2e-025
emb|BX825601.1|CNS0A6AZ Arabidopsis thaliana Full-length cD... 118 2e-025
emb|CQ804288.1| Sequence 699 from Patent WO2004035798 118 2e-025
ref|NM_117438.2| Arabidopsis thaliana transcription factor ... 118 2e-025
ref|NM_113317.2| Arabidopsis thaliana transcription factor ... 118 2e-025
ref|NM_202627.1| Arabidopsis thaliana unknown protein AT3G2... 118 2e-025
ref|NM_001036549.1| Arabidopsis thaliana unknown protein AT... 118 2e-025
gb|T41875.1|T41875 5138 Lambda-PRL2 Arabidopsis thaliana cD... 117 3e-025
gb|AV824017.1|AV824017 AV824017 RAFL6 Arabidopsis thaliana ... 115 1e-024
gb|DR749897.1|DR749897 86-L021127-065-005-F11-SeLA MPIZ-ADI... 115 1e-024
gb|AY070764.1| Arabidopsis thaliana AT3g12730/MBK21_9 mRNA,... 115 1e-024
gb|AY143916.1| Arabidopsis thaliana At3g12730/MBK21_9 mRNA,... 115 1e-024
ref|NM_112109.3| Arabidopsis thaliana transcription factor ... 115 1e-024
gb|N38232.1|N38232 19459 Lambda-PRL2 Arabidopsis thaliana c... 114 2e-024
gb|DR749870.1|DR749870 86-L021131-065-005-F11-SeLB MPIZ-ADI... 114 2e-024
gb|N38325.1|N38325 19552 Lambda-PRL2 Arabidopsis thaliana c... 114 3e-024
gb|BP866645.1|BP866645 BP866645 RAFL21 Arabidopsis thaliana... 113 5e-024
gb|DR749777.1|DR749777 93-L021127-065-005-E12-SeLA MPIZ-ADI... 113 5e-024
emb|BX825505.1|CNS0A6FM Arabidopsis thaliana Full-length cD... 113 5e-024
ref|NM_105627.1| Arabidopsis thaliana transcription factor ... 113 5e-024
gb|AV830187.1|AV830187 AV830187 RAFL9 Arabidopsis thaliana ... 112 7e-024
gb|BP864590.1|BP864590 BP864590 RAFL21 Arabidopsis thaliana... 111 2e-023
gb|CB263057.1|CB263057 36-E8974-008-017-G09-pBl2 MPIZ-ADIS-... 110 5e-023
gb|BP861056.1|BP861056 BP861056 RAFL21 Arabidopsis thaliana... 109 7e-023
dbj|AB012246.1| Arabidopsis thaliana genomic DNA, chromosom... 73 9e-023
gb|AC011698.6|ATAC011698 Arabidopsis thaliana chromosome II... 73 9e-023
ref|NM_202487.1| Arabidopsis thaliana unknown protein AT3G0... 73 3e-022
emb|BX823358.1|CNS0A6I1 Arabidopsis thaliana Full-length cD... 71 8e-022
>gb|AV821962.1|AV821962 AV821962 RAFL4 Arabidopsis thaliana cDNA clone RAFL04-19-A11 5',
mRNA sequence
Length = 469
Score = 127 bits (272), Expect = 3e-028
Identities = 50/56 (89%), Positives = 55/56 (98%)
Frame = +1 / +2
Query: 415 LVLSTDAKPRLKWTPELHERFVEAVHQLGGPDKATPKTIMRLMGIPGLTLYHLKSH 582
L+LSTDAKPRLKWTP+LHERFVEAV+QLGG DKATPKTIM++MGIPGLTLYHLKSH
Sbjct: 260 LILSTDAKPRLKWTPDLHERFVEAVNQLGGGDKATPKTIMKVMGIPGLTLYHLKSH 427
>gb|AV823313.1|AV823313 AV823313 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-17-M07 5',
mRNA sequence
Length = 666
Score = 127 bits (272), Expect = 3e-028
Identities = 49/56 (87%), Positives = 55/56 (98%)
Frame = +1 / +2
Query: 415 LVLSTDAKPRLKWTPELHERFVEAVHQLGGPDKATPKTIMRLMGIPGLTLYHLKSH 582
L+LSTDAKPRLKWTP+LHERF+EAV+QLGG DKATPKTIM++MGIPGLTLYHLKSH
Sbjct: 236 LILSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTIMKVMGIPGLTLYHLKSH 403
>gb|CB263350.1|CB263350 24-E9723-008-016-P05-pBl2 MPIZ-ADIS-008 Arabidopsis thaliana cDNA
clone MPIZp767P0516Q 5-PRIME, mRNA sequence
Length = 574
Score = 127 bits (272), Expect = 3e-028
Identities = 49/56 (87%), Positives = 55/56 (98%)
Frame = +1 / +2
Query: 415 LVLSTDAKPRLKWTPELHERFVEAVHQLGGPDKATPKTIMRLMGIPGLTLYHLKSH 582
L+LSTDAKPRLKWTP+LHERF+EAV+QLGG DKATPKTIM++MGIPGLTLYHLKSH
Sbjct: 212 LILSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTIMKVMGIPGLTLYHLKSH 379
>gb|DR750039.1|DR750039 79-L021127-065-005-G10-SeLA MPIZ-ADIS-065d Arabidopsis thaliana
cDNA clone 005-G10, mRNA sequence
Length = 794
Score = 127 bits (272), Expect = 3e-028
Identities = 49/56 (87%), Positives = 55/56 (98%)
Frame = +1 / +1
Query: 415 LVLSTDAKPRLKWTPELHERFVEAVHQLGGPDKATPKTIMRLMGIPGLTLYHLKSH 582
L+LSTDAKPRLKWTP+LHERF+EAV+QLGG DKATPKTIM++MGIPGLTLYHLKSH
Sbjct: 184 LILSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTIMKVMGIPGLTLYHLKSH 351
>gb|DR750789.1|DR750789 39-L021127-065-005-G05-SeLA MPIZ-ADIS-065d Arabidopsis thaliana
cDNA clone 005-G05, mRNA sequence
Length = 813
Score = 127 bits (272), Expect = 3e-028
Identities = 50/56 (89%), Positives = 55/56 (98%)
Frame = +1 / +2
Query: 415 LVLSTDAKPRLKWTPELHERFVEAVHQLGGPDKATPKTIMRLMGIPGLTLYHLKSH 582
L+LSTDAKPRLKWTP+LHERFVEAV+QLGG DKATPKTIM++MGIPGLTLYHLKSH
Sbjct: 185 LILSTDAKPRLKWTPDLHERFVEAVNQLGGGDKATPKTIMKVMGIPGLTLYHLKSH 352
>gb|AF291817.1|AF291817 Arabidopsis thaliana MYR1 (MYR1) mRNA, complete cds
Length = 1407
Score = 127 bits (272), Expect = 3e-028
Identities = 50/56 (89%), Positives = 55/56 (98%)
Frame = +1 / +3
Query: 415 LVLSTDAKPRLKWTPELHERFVEAVHQLGGPDKATPKTIMRLMGIPGLTLYHLKSH 582
L+LSTDAKPRLKWTP+LHERFVEAV+QLGG DKATPKTIM++MGIPGLTLYHLKSH
Sbjct: 189 LILSTDAKPRLKWTPDLHERFVEAVNQLGGGDKATPKTIMKVMGIPGLTLYHLKSH 356
>gb|AY042878.1| Arabidopsis thaliana transfactor-like protein (MRG7.19) mRNA,
complete cds
Length = 1528
Score = 127 bits (272), Expect = 3e-028
Identities = 50/56 (89%), Positives = 55/56 (98%)
Frame = +1 / +1
Query: 415 LVLSTDAKPRLKWTPELHERFVEAVHQLGGPDKATPKTIMRLMGIPGLTLYHLKSH 582
L+LSTDAKPRLKWTP+LHERFVEAV+QLGG DKATPKTIM++MGIPGLTLYHLKSH
Sbjct: 259 LILSTDAKPRLKWTPDLHERFVEAVNQLGGGDKATPKTIMKVMGIPGLTLYHLKSH 426
>gb|AY074563.1| Arabidopsis thaliana AT3g04030/T11I18_14 mRNA, complete cds
Length = 1329
Score = 127 bits (272), Expect = 3e-028
Identities = 49/56 (87%), Positives = 55/56 (98%)
Frame = +1 / +1
Query: 415 LVLSTDAKPRLKWTPELHERFVEAVHQLGGPDKATPKTIMRLMGIPGLTLYHLKSH 582
L+LSTDAKPRLKWTP+LHERF+EAV+QLGG DKATPKTIM++MGIPGLTLYHLKSH
Sbjct: 235 LILSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTIMKVMGIPGLTLYHLKSH 402
>gb|AY143915.1| Arabidopsis thaliana At3g04030/T11I18_14 mRNA, complete cds
Length = 1167
Score = 127 bits (272), Expect = 3e-028
Identities = 49/56 (87%), Positives = 55/56 (98%)
Frame = +1 / +1
Query: 415 LVLSTDAKPRLKWTPELHERFVEAVHQLGGPDKATPKTIMRLMGIPGLTLYHLKSH 582
L+LSTDAKPRLKWTP+LHERF+EAV+QLGG DKATPKTIM++MGIPGLTLYHLKSH
Sbjct: 112 LILSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTIMKVMGIPGLTLYHLKSH 279
>gb|BT003421.1| Arabidopsis thaliana transfactor-like protein (At5g18240) mRNA,
complete cds
Length = 1312
Score = 127 bits (272), Expect = 3e-028
Identities = 50/56 (89%), Positives = 55/56 (98%)
Frame = +1 / +1
Query: 415 LVLSTDAKPRLKWTPELHERFVEAVHQLGGPDKATPKTIMRLMGIPGLTLYHLKSH 582
L+LSTDAKPRLKWTP+LHERFVEAV+QLGG DKATPKTIM++MGIPGLTLYHLKSH
Sbjct: 112 LILSTDAKPRLKWTPDLHERFVEAVNQLGGGDKATPKTIMKVMGIPGLTLYHLKSH 279
>emb|BX829489.1|CNS09YUW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB17ZA07 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1453
Score = 127 bits (272), Expect = 3e-028
Identities = 50/56 (89%), Positives = 55/56 (98%)
Frame = +1 / +2
Query: 415 LVLSTDAKPRLKWTPELHERFVEAVHQLGGPDKATPKTIMRLMGIPGLTLYHLKSH 582
L+LSTDAKPRLKWTP+LHERFVEAV+QLGG DKATPKTIM++MGIPGLTLYHLKSH
Sbjct: 206 LILSTDAKPRLKWTPDLHERFVEAVNQLGGGDKATPKTIMKVMGIPGLTLYHLKSH 373
>emb|BX831267.1|CNS0A0UB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS73ZB04 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1443
Score = 127 bits (272), Expect = 3e-028
Identities = 50/56 (89%), Positives = 55/56 (98%)
Frame = +1 / +1
Query: 415 LVLSTDAKPRLKWTPELHERFVEAVHQLGGPDKATPKTIMRLMGIPGLTLYHLKSH 582
L+LSTDAKPRL+WTP+LHERFVEAV+QLGG DKATPKTIMR+MGIPGLTLYHLKSH
Sbjct: 184 LILSTDAKPRLRWTPDLHERFVEAVNQLGGGDKATPKTIMRVMGIPGLTLYHLKSH 351
>emb|BX830152.1|CNS0A1FP Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB62ZH01 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1380
Score = 127 bits (272), Expect = 3e-028
Identities = 50/56 (89%), Positives = 55/56 (98%)
Frame = +1 / +1
Query: 415 LVLSTDAKPRLKWTPELHERFVEAVHQLGGPDKATPKTIMRLMGIPGLTLYHLKSH 582
L+LSTDAKPRLKWTP+LHERFVEAV+QLGG DKATPKTIM++MGIPGLTLYHLKSH
Sbjct: 184 LILSTDAKPRLKWTPDLHERFVEAVNQLGGGDKATPKTIMKVMGIPGLTLYHLKSH 351
>ref|NM_111274.3| Arabidopsis thaliana transcription factor AT3G04030 transcript
variant AT3G04030.1 mRNA, complete cds
Length = 1329
Score = 127 bits (272), Expect = 3e-028
Identities = 49/56 (87%), Positives = 55/56 (98%)
Frame = +1 / +2
Query: 415 LVLSTDAKPRLKWTPELHERFVEAVHQLGGPDKATPKTIMRLMGIPGLTLYHLKSH 582
L+LSTDAKPRLKWTP+LHERF+EAV+QLGG DKATPKTIM++MGIPGLTLYHLKSH
Sbjct: 236 LILSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTIMKVMGIPGLTLYHLKSH 403
>ref|NM_121829.2| Arabidopsis thaliana MYR1; transcription factor AT5G18240 (MYR1)
transcript variant AT5G18240.1 mRNA, complete cds
Length = 1688
Score = 127 bits (272), Expect = 3e-028
Identities = 50/56 (89%), Positives = 55/56 (98%)
Frame = +1 / +1
Query: 415 LVLSTDAKPRLKWTPELHERFVEAVHQLGGPDKATPKTIMRLMGIPGLTLYHLKSH 582
L+LSTDAKPRLKWTP+LHERFVEAV+QLGG DKATPKTIM++MGIPGLTLYHLKSH
Sbjct: 259 LILSTDAKPRLKWTPDLHERFVEAVNQLGGGDKATPKTIMKVMGIPGLTLYHLKSH 426
>ref|NM_180511.1| Arabidopsis thaliana MYR1; transcription factor AT5G18240 (MYR1)
transcript variant AT5G18240.2 mRNA, complete cds
Length = 1670
Score = 127 bits (272), Expect = 3e-028
Identities = 50/56 (89%), Positives = 55/56 (98%)
Frame = +1 / +1
Query: 415 LVLSTDAKPRLKWTPELHERFVEAVHQLGGPDKATPKTIMRLMGIPGLTLYHLKSH 582
L+LSTDAKPRLKWTP+LHERFVEAV+QLGG DKATPKTIM++MGIPGLTLYHLKSH
Sbjct: 259 LILSTDAKPRLKWTPDLHERFVEAVNQLGGGDKATPKTIMKVMGIPGLTLYHLKSH 426
>ref|NM_203068.1| Arabidopsis thaliana MYR1 AT5G18240 (MYR1) transcript variant
AT5G18240.3 mRNA, complete cds
Length = 1657
Score = 127 bits (272), Expect = 3e-028
Identities = 50/56 (89%), Positives = 55/56 (98%)
Frame = +1 / +3
Query: 415 LVLSTDAKPRLKWTPELHERFVEAVHQLGGPDKATPKTIMRLMGIPGLTLYHLKSH 582
L+LSTDAKPRLKWTP+LHERFVEAV+QLGG DKATPKTIM++MGIPGLTLYHLKSH
Sbjct: 246 LILSTDAKPRLKWTPDLHERFVEAVNQLGGGDKATPKTIMKVMGIPGLTLYHLKSH 413
>ref|NM_203069.1| Arabidopsis thaliana MYR1 AT5G18240 (MYR1) transcript variant
AT5G18240.4 mRNA, complete cds
Length = 1613
Score = 127 bits (272), Expect = 3e-028
Identities = 50/56 (89%), Positives = 55/56 (98%)
Frame = +1 / +1
Query: 415 LVLSTDAKPRLKWTPELHERFVEAVHQLGGPDKATPKTIMRLMGIPGLTLYHLKSH 582
L+LSTDAKPRLKWTP+LHERFVEAV+QLGG DKATPKTIM++MGIPGLTLYHLKSH
Sbjct: 184 LILSTDAKPRLKWTPDLHERFVEAVNQLGGGDKATPKTIMKVMGIPGLTLYHLKSH 351
>ref|NM_203070.1| Arabidopsis thaliana MYR1 AT5G18240 (MYR1) transcript variant
AT5G18240.5 mRNA, complete cds
Length = 1607
Score = 127 bits (272), Expect = 3e-028
Identities = 50/56 (89%), Positives = 55/56 (98%)
Frame = +1 / +1
Query: 415 LVLSTDAKPRLKWTPELHERFVEAVHQLGGPDKATPKTIMRLMGIPGLTLYHLKSH 582
L+LSTDAKPRLKWTP+LHERFVEAV+QLGG DKATPKTIM++MGIPGLTLYHLKSH
Sbjct: 184 LILSTDAKPRLKWTPDLHERFVEAVNQLGGGDKATPKTIMKVMGIPGLTLYHLKSH 351
>emb|BX830989.1|CNS0A0SJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS46ZD03 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1422
Score = 126 bits (269), Expect = 7e-028
Identities = 49/56 (87%), Positives = 55/56 (98%)
Frame = +1 / +3
Query: 415 LVLSTDAKPRLKWTPELHERFVEAVHQLGGPDKATPKTIMRLMGIPGLTLYHLKSH 582
L+LSTDAKPRL+WTP+LHERFVEAV+QLGG DKATPKTIM++MGIPGLTLYHLKSH
Sbjct: 246 LILSTDAKPRLRWTPDLHERFVEAVNQLGGGDKATPKTIMKVMGIPGLTLYHLKSH 413
>gb|BP841506.1|BP841506 BP841506 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-51-C23 5',
mRNA sequence
Length = 396
Score = 122 bits (260), Expect = 1e-026
Identities = 47/54 (87%), Positives = 53/54 (98%)
Frame = +1 / +1
Query: 415 LVLSTDAKPRLKWTPELHERFVEAVHQLGGPDKATPKTIMRLMGIPGLTLYHLK 576
L+LSTDAKPRLKWTP+LHERF+EAV+QLGG DKATPKTIM++MGIPGLTLYHLK
Sbjct: 235 LILSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTIMKVMGIPGLTLYHLK 396
>gb|BE530060.1|BE530060 M76B02STM Arabidopsis developing seed Arabidopsis thaliana cDNA
clone 600039501R1 5', mRNA sequence
Length = 274
Score = 118 bits (253), Expect = 1e-025
Identities = 47/56 (83%), Positives = 52/56 (92%)
Frame = +1 / +3
Query: 415 LVLSTDAKPRLKWTPELHERFVEAVHQLGGPDKATPKTIMRLMGIPGLTLYHLKSH 582
LVL+TD KPRL+WT ELHERFV+AV QLGGPDKATPKTIMR+MG+ GLTLYHLKSH
Sbjct: 96 LVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSH 263
>gb|AV829855.1|AV829855 AV829855 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-57-C07 5',
mRNA sequence
Length = 361
Score = 118 bits (253), Expect = 1e-025
Identities = 47/56 (83%), Positives = 52/56 (92%)
Frame = +1 / +2
Query: 415 LVLSTDAKPRLKWTPELHERFVEAVHQLGGPDKATPKTIMRLMGIPGLTLYHLKSH 582
LVL+TD KPRL+WT ELHERFV+AV QLGGPDKATPKTIMR+MG+ GLTLYHLKSH
Sbjct: 149 LVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSH 316
>gb|DR750765.1|DR750765 38-L021127-065-005-F05-SeLA MPIZ-ADIS-065d Arabidopsis thaliana
cDNA clone 005-F05, mRNA sequence
Length = 791
Score = 118 bits (253), Expect = 1e-025
Identities = 47/56 (83%), Positives = 52/56 (92%)
Frame = +1 / +3
Query: 415 LVLSTDAKPRLKWTPELHERFVEAVHQLGGPDKATPKTIMRLMGIPGLTLYHLKSH 582
LVL+TD KPRL+WT ELHERFV+AV QLGGPDKATPKTIMR+MG+ GLTLYHLKSH
Sbjct: 150 LVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSH 317
>ref|NM_179574.1| Arabidopsis thaliana APL (ALTERED PHLOEM DEVELOPMENT);
transcription factor AT1G79430 (APL) transcript variant
AT1G79430.2 mRNA, complete cds
Length = 1439
Score = 118 bits (253), Expect = 1e-025
Identities = 47/56 (83%), Positives = 52/56 (92%)
Frame = +1 / +1
Query: 415 LVLSTDAKPRLKWTPELHERFVEAVHQLGGPDKATPKTIMRLMGIPGLTLYHLKSH 582
LVL+TD KPRL+WT ELHERFV+AV QLGGPDKATPKTIMR+MG+ GLTLYHLKSH
Sbjct: 148 LVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSH 315
>gb|AV824035.1|AV824035 AV824035 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-12-H15 5',
mRNA sequence
Length = 635
Score = 118 bits (252), Expect = 2e-025
Identities = 47/56 (83%), Positives = 51/56 (91%)
Frame = +1 / +2
Query: 415 LVLSTDAKPRLKWTPELHERFVEAVHQLGGPDKATPKTIMRLMGIPGLTLYHLKSH 582
LVL+TD KPRL+WT ELHERFV+AV QLGGPDKATPKTIMR MG+ GLTLYHLKSH
Sbjct: 152 LVLTTDPKPRLRWTSELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSH 319
>gb|AV825695.1|AV825695 AV825695 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-12-N14 5',
mRNA sequence
Length = 622
Score = 118 bits (252), Expect = 2e-025
Identities = 47/56 (83%), Positives = 51/56 (91%)
Frame = +1 / +2
Query: 415 LVLSTDAKPRLKWTPELHERFVEAVHQLGGPDKATPKTIMRLMGIPGLTLYHLKSH 582
LVL+TD KPRL+WT ELHERFV+AV QLGGPDKATPKTIMR MG+ GLTLYHLKSH
Sbjct: 185 LVLTTDPKPRLRWTSELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSH 352
>gb|CB255826.1|CB255826 19-E011172-027-005-E05-T7R MPIZ-ADIS-027 Arabidopsis thaliana cDNA
clone MPIZp772E055Q 5-PRIME, mRNA sequence
Length = 419
Score = 118 bits (252), Expect = 2e-025
Identities = 47/56 (83%), Positives = 51/56 (91%)
Frame = +1 / +1
Query: 415 LVLSTDAKPRLKWTPELHERFVEAVHQLGGPDKATPKTIMRLMGIPGLTLYHLKSH 582
LVL+TD KPRL+WT ELHERFV+AV QLGGPDKATPKTIMR MG+ GLTLYHLKSH
Sbjct: 127 LVLTTDPKPRLRWTTELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSH 294
>gb|AV565361.1|AV565361 AV565361 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ222e12F 3', mRNA sequence
Length = 515
Score = 118 bits (252), Expect = 2e-025
Identities = 47/56 (83%), Positives = 51/56 (91%)
Frame = +1 / +2
Query: 415 LVLSTDAKPRLKWTPELHERFVEAVHQLGGPDKATPKTIMRLMGIPGLTLYHLKSH 582
LVL+TD KPRL+WT ELHERFV+AV QLGGPDKATPKTIMR MG+ GLTLYHLKSH
Sbjct: 101 LVLTTDPKPRLRWTTELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSH 268
>gb|CK119230.1|CK119230 213g09.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011G09213
5-PRIME, mRNA sequence
Length = 584
Score = 118 bits (252), Expect = 2e-025
Identities = 47/56 (83%), Positives = 51/56 (91%)
Frame = +1 / +3
Query: 415 LVLSTDAKPRLKWTPELHERFVEAVHQLGGPDKATPKTIMRLMGIPGLTLYHLKSH 582
LVL+TD KPRL+WT ELHERFV+AV QLGGPDKATPKTIMR MG+ GLTLYHLKSH
Sbjct: 171 LVLTTDPKPRLRWTSELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSH 338
>gb|BP560992.1|BP560992 BP560992 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-17-N21 5',
mRNA sequence
Length = 666
Score = 118 bits (252), Expect = 2e-025
Identities = 47/56 (83%), Positives = 51/56 (91%)
Frame = +1 / +2
Query: 415 LVLSTDAKPRLKWTPELHERFVEAVHQLGGPDKATPKTIMRLMGIPGLTLYHLKSH 582
LVL+TD KPRL+WT ELHERFV+AV QLGGPDKATPKTIMR MG+ GLTLYHLKSH
Sbjct: 128 LVLTTDPKPRLRWTTELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSH 295
>gb|BP798435.1|BP798435 BP798435 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-07-E05 5',
mRNA sequence
Length = 403
Score = 118 bits (252), Expect = 2e-025
Identities = 47/56 (83%), Positives = 51/56 (91%)
Frame = +1 / +2
Query: 415 LVLSTDAKPRLKWTPELHERFVEAVHQLGGPDKATPKTIMRLMGIPGLTLYHLKSH 582
LVL+TD KPRL+WT ELHERFV+AV QLGGPDKATPKTIMR MG+ GLTLYHLKSH
Sbjct: 161 LVLTTDPKPRLRWTSELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSH 328
>gb|DR750293.1|DR750293 64-L021127-065-005-H08-SeLA MPIZ-ADIS-065d Arabidopsis thaliana
cDNA clone 005-H08, mRNA sequence
Length = 785
Score = 118 bits (252), Expect = 2e-025
Identities = 47/56 (83%), Positives = 51/56 (91%)
Frame = +1 / +1
Query: 415 LVLSTDAKPRLKWTPELHERFVEAVHQLGGPDKATPKTIMRLMGIPGLTLYHLKSH 582
LVL+TD KPRL+WT ELHERFV+AV QLGGPDKATPKTIMR MG+ GLTLYHLKSH
Sbjct: 160 LVLTTDPKPRLRWTSELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSH 327
>gb|AY050355.1| Arabidopsis thaliana AT3g24120/MUJ8_3 mRNA, complete cds
Length = 1097
Score = 118 bits (252), Expect = 2e-025
Identities = 47/56 (83%), Positives = 51/56 (91%)
Frame = +1 / +1
Query: 415 LVLSTDAKPRLKWTPELHERFVEAVHQLGGPDKATPKTIMRLMGIPGLTLYHLKSH 582
LVL+TD KPRL+WT ELHERFV+AV QLGGPDKATPKTIMR MG+ GLTLYHLKSH
Sbjct: 130 LVLTTDPKPRLRWTTELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSH 297
>gb|AY081310.1| Arabidopsis thaliana putative protein (At4g13640) mRNA, complete
cds
Length = 1302
Score = 118 bits (252), Expect = 2e-025
Identities = 47/56 (83%), Positives = 51/56 (91%)
Frame = +1 / +1
Query: 415 LVLSTDAKPRLKWTPELHERFVEAVHQLGGPDKATPKTIMRLMGIPGLTLYHLKSH 582
LVL+TD KPRL+WT ELHERFV+AV QLGGPDKATPKTIMR MG+ GLTLYHLKSH
Sbjct: 184 LVLTTDPKPRLRWTSELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSH 351
>gb|AY094046.1| Arabidopsis thaliana AT3g24120/MUJ8_3 mRNA, complete cds
Length = 888
Score = 118 bits (252), Expect = 2e-025
Identities = 47/56 (83%), Positives = 51/56 (91%)
Frame = +1 / +1
Query: 415 LVLSTDAKPRLKWTPELHERFVEAVHQLGGPDKATPKTIMRLMGIPGLTLYHLKSH 582
LVL+TD KPRL+WT ELHERFV+AV QLGGPDKATPKTIMR MG+ GLTLYHLKSH
Sbjct: 100 LVLTTDPKPRLRWTTELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSH 267
>gb|AY087771.1| Arabidopsis thaliana clone 38327 mRNA, complete sequence
Length = 1155
Score = 118 bits (252), Expect = 2e-025
Identities = 47/56 (83%), Positives = 51/56 (91%)
Frame = +1 / +2
Query: 415 LVLSTDAKPRLKWTPELHERFVEAVHQLGGPDKATPKTIMRLMGIPGLTLYHLKSH 582
LVL+TD KPRL+WT ELHERFV+AV QLGGPDKATPKTIMR MG+ GLTLYHLKSH
Sbjct: 221 LVLTTDPKPRLRWTSELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSH 388
>gb|AY088428.1| Arabidopsis thaliana clone 6626 mRNA, complete sequence
Length = 1098
Score = 118 bits (252), Expect = 2e-025
Identities = 47/56 (83%), Positives = 51/56 (91%)
Frame = +1 / +3
Query: 415 LVLSTDAKPRLKWTPELHERFVEAVHQLGGPDKATPKTIMRLMGIPGLTLYHLKSH 582
LVL+TD KPRL+WT ELHERFV+AV QLGGPDKATPKTIMR MG+ GLTLYHLKSH
Sbjct: 135 LVLTTDPKPRLRWTTELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSH 302
>emb|BX826975.1|CNS0A46N Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB82ZG04 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1117
Score = 118 bits (252), Expect = 2e-025
Identities = 47/56 (83%), Positives = 51/56 (91%)
Frame = +1 / +3
Query: 415 LVLSTDAKPRLKWTPELHERFVEAVHQLGGPDKATPKTIMRLMGIPGLTLYHLKSH 582
LVL+TD KPRL+WT ELHERFV+AV QLGGPDKATPKTIMR MG+ GLTLYHLKSH
Sbjct: 216 LVLTTDPKPRLRWTSELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSH 383
>emb|BX824265.1|CNS0A4TJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH35ZA11 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1344
Score = 118 bits (252), Expect = 2e-025
Identities = 47/56 (83%), Positives = 51/56 (91%)
Frame = +1 / +3
Query: 415 LVLSTDAKPRLKWTPELHERFVEAVHQLGGPDKATPKTIMRLMGIPGLTLYHLKSH 582
LVL+TD KPRL+WT ELHERFV+AV QLGGPDKATPKTIMR MG+ GLTLYHLKSH
Sbjct: 267 LVLTTDPKPRLRWTTELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSH 434
>emb|BX825601.1|CNS0A6AZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL47ZE10 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 1054
Score = 118 bits (252), Expect = 2e-025
Identities = 47/56 (83%), Positives = 51/56 (91%)
Frame = +1 / +2
Query: 415 LVLSTDAKPRLKWTPELHERFVEAVHQLGGPDKATPKTIMRLMGIPGLTLYHLKSH 582
LVL+TD KPRL+WT ELHERFV+AV QLGGPDKATPKTIMR MG+ GLTLYHLKSH
Sbjct: 128 LVLTTDPKPRLRWTTELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSH 295
>emb|CQ804288.1| Sequence 699 from Patent WO2004035798
Length = 879
Score = 118 bits (252), Expect = 2e-025
Identities = 47/56 (83%), Positives = 51/56 (91%)
Frame = +1 / +1
Query: 415 LVLSTDAKPRLKWTPELHERFVEAVHQLGGPDKATPKTIMRLMGIPGLTLYHLKSH 582
LVL+TD KPRL+WT ELHERFV+AV QLGGPDKATPKTIMR MG+ GLTLYHLKSH
Sbjct: 88 LVLTTDPKPRLRWTSELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSH 255
>ref|NM_117438.2| Arabidopsis thaliana transcription factor AT4G13640 transcript
variant AT4G13640.1 mRNA, complete cds
Length = 1284
Score = 118 bits (252), Expect = 2e-025
Identities = 47/56 (83%), Positives = 51/56 (91%)
Frame = +1 / +2
Query: 415 LVLSTDAKPRLKWTPELHERFVEAVHQLGGPDKATPKTIMRLMGIPGLTLYHLKSH 582
LVL+TD KPRL+WT ELHERFV+AV QLGGPDKATPKTIMR MG+ GLTLYHLKSH
Sbjct: 221 LVLTTDPKPRLRWTSELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSH 388
>ref|NM_113317.2| Arabidopsis thaliana transcription factor AT3G24120 transcript
variant AT3G24120.1 mRNA, complete cds
Length = 1100
Score = 118 bits (252), Expect = 2e-025
Identities = 47/56 (83%), Positives = 51/56 (91%)
Frame = +1 / +3
Query: 415 LVLSTDAKPRLKWTPELHERFVEAVHQLGGPDKATPKTIMRLMGIPGLTLYHLKSH 582
LVL+TD KPRL+WT ELHERFV+AV QLGGPDKATPKTIMR MG+ GLTLYHLKSH
Sbjct: 135 LVLTTDPKPRLRWTTELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSH 302
>ref|NM_202627.1| Arabidopsis thaliana unknown protein AT3G24120 transcript variant
AT3G24120.2 mRNA, complete cds
Length = 1353
Score = 118 bits (252), Expect = 2e-025
Identities = 47/56 (83%), Positives = 51/56 (91%)
Frame = +1 / +3
Query: 415 LVLSTDAKPRLKWTPELHERFVEAVHQLGGPDKATPKTIMRLMGIPGLTLYHLKSH 582
LVL+TD KPRL+WT ELHERFV+AV QLGGPDKATPKTIMR MG+ GLTLYHLKSH
Sbjct: 267 LVLTTDPKPRLRWTTELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSH 434
>ref|NM_001036549.1| Arabidopsis thaliana unknown protein AT4G13640 transcript variant
AT4G13640.2 mRNA, complete cds
Length = 1279
Score = 118 bits (252), Expect = 2e-025
Identities = 47/56 (83%), Positives = 51/56 (91%)
Frame = +1 / +2
Query: 415 LVLSTDAKPRLKWTPELHERFVEAVHQLGGPDKATPKTIMRLMGIPGLTLYHLKSH 582
LVL+TD KPRL+WT ELHERFV+AV QLGGPDKATPKTIMR MG+ GLTLYHLKSH
Sbjct: 221 LVLTTDPKPRLRWTSELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSH 388
>gb|T41875.1|T41875 5138 Lambda-PRL2 Arabidopsis thaliana cDNA clone 109F1T7, mRNA
sequence
Length = 474
Score = 117 bits (250), Expect = 3e-025
Identities = 47/56 (83%), Positives = 51/56 (91%)
Frame = +1 / +2
Query: 415 LVLSTDAKPRLKWTPELHERFVEAVHQLGGPDKATPKTIMRLMGIPGLTLYHLKSH 582
LVL+TD KPRL WT ELHERFV+AV QLGGPDKATPKTIMR+MG+ GLTLYHLKSH
Sbjct: 14 LVLTTDPKPRLXWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSH 181
>gb|AV824017.1|AV824017 AV824017 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-12-B20 5',
mRNA sequence
Length = 644
Score = 115 bits (245), Expect = 1e-024
Identities = 45/56 (80%), Positives = 51/56 (91%)
Frame = +1 / +2
Query: 415 LVLSTDAKPRLKWTPELHERFVEAVHQLGGPDKATPKTIMRLMGIPGLTLYHLKSH 582
LVL+TD KPRL+WT ELHERFV+AV LGGP+KATPKTIMR+MG+ GLTLYHLKSH
Sbjct: 305 LVLTTDPKPRLRWTTELHERFVDAVTHLGGPEKATPKTIMRVMGVKGLTLYHLKSH 472
>gb|DR749897.1|DR749897 86-L021127-065-005-F11-SeLA MPIZ-ADIS-065d Arabidopsis thaliana
cDNA clone 005-F11, mRNA sequence
Length = 418
Score = 115 bits (245), Expect = 1e-024
Identities = 45/56 (80%), Positives = 51/56 (91%)
Frame = +1 / +3
Query: 415 LVLSTDAKPRLKWTPELHERFVEAVHQLGGPDKATPKTIMRLMGIPGLTLYHLKSH 582
LVL+TD KPRL+WT ELHERFV+AV LGGP+KATPKTIMR+MG+ GLTLYHLKSH
Sbjct: 99 LVLTTDPKPRLRWTTELHERFVDAVTHLGGPEKATPKTIMRVMGVKGLTLYHLKSH 266
>gb|AY070764.1| Arabidopsis thaliana AT3g12730/MBK21_9 mRNA, complete cds
Length = 1103
Score = 115 bits (245), Expect = 1e-024
Identities = 45/56 (80%), Positives = 51/56 (91%)
Frame = +1 / +1
Query: 415 LVLSTDAKPRLKWTPELHERFVEAVHQLGGPDKATPKTIMRLMGIPGLTLYHLKSH 582
LVL+TD KPRL+WT ELHERFV+AV LGGP+KATPKTIMR+MG+ GLTLYHLKSH
Sbjct: 304 LVLTTDPKPRLRWTTELHERFVDAVTHLGGPEKATPKTIMRVMGVKGLTLYHLKSH 471
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,139,965,891
Number of Sequences: 1013581
Number of extensions: 14508881
Number of successful extensions: 177136
Number of sequences better than 1.0e-020: 80
length of database: 302,980,290
effective HSP length: 55
effective length of database: 247,233,335
effective search space used: 34118200230
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)