TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2750753.2.1
(1126 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|NM_180913.1| Arabidopsis thaliana ARF2 (AUXIN RESPONSE ... 343 e-147
gb|BT000784.1| Arabidopsis thaliana clone RAFL07-10-G12 (R1... 343 e-147
ref|NM_203251.1| Arabidopsis thaliana ARF2 (AUXIN RESPONSE ... 343 e-147
emb|CS165494.1| Sequence 2 from Patent WO2005085453 343 e-147
ref|NM_125593.2| Arabidopsis thaliana ARF2 (AUXIN RESPONSE ... 343 e-147
dbj|AK221305.1| Arabidopsis thaliana mRNA for ARF1-binding ... 343 e-147
dbj|AK221252.1| Arabidopsis thaliana mRNA for ARF1-binding ... 343 e-147
dbj|AK221254.1| Arabidopsis thaliana mRNA for ARF1-binding ... 343 e-147
dbj|AK221274.1| Arabidopsis thaliana mRNA for ARF1-binding ... 343 e-147
dbj|AK221277.1| Arabidopsis thaliana mRNA for ARF1-binding ... 343 e-147
dbj|AK221282.1| Arabidopsis thaliana mRNA for ARF1-binding ... 343 e-147
gb|AF378862.1|AF378862 Arabidopsis thaliana AT5g62000/mtg10... 343 e-147
gb|AY669787.1| Arabidopsis thaliana clone C105342 ARF2 (At5... 343 e-147
emb|CS165547.1| Sequence 55 from Patent WO2005085453 343 e-147
emb|CS165497.1| Sequence 5 from Patent WO2005085453 343 e-147
emb|CS165548.1| Sequence 56 from Patent WO2005085453 343 e-147
gb|BT001072.1| Arabidopsis thaliana At5g62000/mtg10_20 mRNA... 343 e-147
emb|CS165493.1| Sequence 1 from Patent WO2005085453 132 e-118
emb|CS165496.1| Sequence 4 from Patent WO2005085453 132 e-118
dbj|AB016880.1| Arabidopsis thaliana genomic DNA, chromosom... 132 e-112
ref|NM_104668.2| Arabidopsis thaliana ARF1 (AUXIN RESPONSE ... 307 e-104
ref|NM_179499.1| Arabidopsis thaliana ARF1 (AUXIN RESPONSE ... 307 e-104
gb|U83245.1|ATU83245 Arabidopsis thaliana auxin response fa... 307 e-104
ref|NM_001036131.1| Arabidopsis thaliana ARF1 (AUXIN RESPON... 307 e-104
gb|BT002748.1| Arabidopsis thaliana clone C105458 auxin res... 307 e-104
emb|AX507306.1| Sequence 2001 from Patent WO0216655 307 e-104
gb|AY133723.1| Arabidopsis thaliana auxin response factor 1... 303 e-103
ref|NM_001036629.1| Arabidopsis thaliana ARF9 (AUXIN RESPON... 291 e-101
ref|NM_118530.3| Arabidopsis thaliana ARF9 (AUXIN RESPONSE ... 291 e-101
emb|BX828437.1|CNS0A2BW Arabidopsis thaliana Full-length cD... 291 e-101
gb|AF082176.1|AF082176 Arabidopsis thaliana auxin response ... 291 e-101
gb|AF344312.1| Arabidopsis thaliana clone C00029 (e) auxin ... 291 e-101
gb|BT015544.1| Arabidopsis thaliana At4g23980 mRNA sequence 175 6e-097
ref|NM_116048.2| Arabidopsis thaliana ARF18; transcription ... 276 1e-096
gb|AY070463.1| Arabidopsis thaliana AT3g61830/F15G16_220 mR... 276 1e-096
gb|AY059746.1| Arabidopsis thaliana auxin response factor A... 276 1e-096
emb|BX823552.1|CNS0A4QR Arabidopsis thaliana Full-length cD... 276 1e-096
gb|AY091392.1| Arabidopsis thaliana putative auxin response... 276 1e-096
gb|AF334717.1| Arabidopsis thaliana auxin response factor A... 276 1e-096
gb|BU635530.1|BU635530 024G07 Infected Arabidopsis Leaf Ara... 281 1e-096
ref|NM_130218.3| Arabidopsis thaliana ARF11 (AUXIN RESPONSE... 271 7e-094
ref|NM_201972.1| Arabidopsis thaliana ARF11 (AUXIN RESPONSE... 271 7e-094
ref|NM_001036471.1| Arabidopsis thaliana ARF11 (AUXIN RESPO... 271 7e-094
gb|AY669791.1| Arabidopsis thaliana clone C105346 ARF11 (At... 271 7e-094
emb|BX815613.1|CNS0ADXB Arabidopsis thaliana Full-length cD... 262 2e-092
gb|U53672.2|ATU53672 Arabidopsis thaliana early auxin-induc... 227 2e-083
ref|NM_101780.1| Arabidopsis thaliana ARF19; transcription ... 227 2e-083
gb|AY669794.1| Arabidopsis thaliana clone C105352 ARF19 (At... 227 2e-083
ref|NM_180715.1| Arabidopsis thaliana NPH4 (NON-PHOTOTROPHI... 225 1e-080
ref|NM_122080.2| Arabidopsis thaliana NPH4 (NON-PHOTOTROPHI... 225 1e-080
ref|NM_180716.1| Arabidopsis thaliana NPH4 (NON-PHOTOTROPHI... 223 3e-080
gb|AF042195.1|AF042195 Arabidopsis thaliana auxin response ... 223 3e-080
gb|AY669789.1| Arabidopsis thaliana clone C105344 ARF7 (At5... 223 3e-080
gb|AY080595.1| Arabidopsis thaliana unknown protein (At5g20... 223 3e-080
emb|AX505548.1| Sequence 243 from Patent WO0216655 223 3e-080
gb|AF022368.1|AF022368 Arabidopsis thaliana BIPOSTO (BIP) m... 223 4e-080
ref|NM_125438.2| Arabidopsis thaliana ARF4 (AUXIN RESPONSE ... 206 2e-079
gb|AY080832.1| Arabidopsis thaliana auxin response factor A... 206 2e-079
gb|AF013466.1|AF013466 Arabidopsis thaliana auxin response ... 206 2e-079
gb|AY113977.1| Arabidopsis thaliana auxin response factor A... 206 2e-079
gb|AF344313.1| Arabidopsis thaliana auxin response factor 4... 206 2e-079
emb|AL138642.1|ATF21F14 Arabidopsis thaliana DNA chromosome... 103 2e-079
ref|NM_123060.2| Arabidopsis thaliana ARF8 (AUXIN RESPONSE ... 241 9e-079
gb|AF042196.1|AF042196 Arabidopsis thaliana auxin response ... 241 9e-079
gb|AY669790.1| Arabidopsis thaliana clone C105345 ARF8 (At5... 241 9e-079
gb|DR750436.1|DR750436 56-L022342-065-009-H07-SeLA MPIZ-ADI... 295 2e-078
gb|AC006526.8| Arabidopsis thaliana chromosome 2 clone F11C... 102 4e-078
gb|AC006418.4| Arabidopsis thaliana chromosome 2 clone F13A... 102 4e-078
ref|NM_102771.2| Arabidopsis thaliana ARF6 (AUXIN RESPONSE ... 238 2e-077
gb|AF013467.1|AF013467 Arabidopsis thaliana ARF6 (ARF6) mRN... 238 2e-077
ref|NM_001036038.1| Arabidopsis thaliana ARF6 (AUXIN RESPON... 238 2e-077
gb|AY669788.1| Arabidopsis thaliana clone C105343 ARF6 (At1... 238 2e-077
gb|AC007258.3| Arabidopsis thaliana chromosome I BAC F23H11... 110 4e-076
ref|NM_101840.2| Arabidopsis thaliana MP (MONOPTEROS); tran... 229 2e-074
gb|BT002050.1| Arabidopsis thaliana transcription factor (A... 229 2e-074
gb|AF037229.1|AF037229 Arabidopsis thaliana transcription f... 229 2e-074
emb|AX505602.1| Sequence 297 from Patent WO0216655 229 2e-074
emb|AX651413.1| Sequence 208 from Patent WO03000898 229 2e-074
gb|AF334716.1| Arabidopsis thaliana clone C00027 (h) auxin ... 229 2e-074
gb|BT008805.1| Arabidopsis thaliana At1g19850 gene, complet... 229 2e-074
gb|U79557.1|U79557 Arabidopsis thaliana IAA24 (IAA24) mRNA,... 229 2e-074
ref|NM_103250.1| Arabidopsis thaliana ARF14; transcription ... 226 5e-073
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 149 1e-070
gb|AC002343.1|ATAC002343 Arabidopsis thaliana chromosome IV... 107 2e-070
emb|AL161560.2|ATCHRIV60 Arabidopsis thaliana DNA chromosom... 107 2e-070
emb|AL078468.1|ATT32A16 Arabidopsis thaliana DNA chromosome... 107 2e-070
emb|AL132959.1|ATF15G16 Arabidopsis thaliana DNA chromosome... 103 4e-070
ref|NM_128946.2| Arabidopsis thaliana ETT (ETTIN); transcri... 215 4e-069
gb|U89296.1|ATU89296 Arabidopsis thaliana auxin response tr... 215 4e-069
gb|AF360313.1| Arabidopsis thaliana auxin response transcri... 215 4e-069
gb|AY056365.1| Arabidopsis thaliana auxin response transcri... 215 4e-069
gb|AF336917.1| Arabidopsis thaliana auxin response transcri... 215 4e-069
emb|AX506835.1| Sequence 1530 from Patent WO0216655 215 4e-069
emb|AX651787.1| Sequence 640 from Patent WO03000898 215 4e-069
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 81 7e-069
gb|AC025813.3|AC025813 Arabidopsis thaliana chromosome I cl... 68 8e-069
gb|AC069143.3|T29M8 Sequence of BAC T29M8 from Arabidopsis ... 68 8e-069
gb|AY008390.1| Arabidopsis thaliana ARF11/IAA22 gene, compl... 68 9e-069
ref|NM_103164.2| Arabidopsis thaliana ARF21; transcription ... 214 2e-068
ref|NM_103248.1| Arabidopsis thaliana ARF15; transcription ... 212 1e-067
gb|AY669796.1| Arabidopsis thaliana clone C105354 ARF22 (At... 204 3e-065
ref|NM_103162.2| Arabidopsis thaliana ARF22; transcription ... 204 3e-065
gb|AY669792.1| Arabidopsis thaliana clone C105347 ARF12 (At... 221 9e-065
ref|NM_103153.2| Arabidopsis thaliana ARF12; transcription ... 221 9e-065
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 131 1e-064
gb|AY669793.1| Arabidopsis thaliana clone C105348 (B) ARF13... 104 4e-064
ref|NM_103140.3| Arabidopsis thaliana ARF13; transcription ... 104 4e-064
gb|AY669795.1| Arabidopsis thaliana clone C00610 ARF20 (At1... 156 1e-063
ref|NM_103222.2| Arabidopsis thaliana ARF20; transcription ... 156 1e-063
gb|BX838143.1|BX838143 BX838143 Arabidopsis thaliana Hormon... 226 4e-059
gb|AF037228.1|AF037228 Arabidopsis thaliana transcription f... 75 2e-057
gb|BX839096.1|BX839096 BX839096 Arabidopsis thaliana Adult ... 215 1e-056
gb|AY680406.1| Arabidopsis thaliana ARF13 (At1g34170) mRNA,... 105 2e-055
ref|NM_001036062.1| Arabidopsis thaliana ARF13 AT1G34170 (A... 105 2e-055
gb|BP561257.2|BP561257 BP561257 RAFL6 Arabidopsis thaliana ... 177 9e-055
gb|AF186466.1|AF186466 Arabidopsis thaliana non-phototropic... 73 5e-054
gb|AY008392.1| Arabidopsis thaliana ARF7 (ARF7) gene, compl... 73 6e-054
dbj|AB024026.1| Arabidopsis thaliana genomic DNA, chromosom... 70 2e-052
emb|BX820997.1|CNS0A8K9 Arabidopsis thaliana Full-length cD... 90 2e-051
gb|AC007797.7|AC007797 Arabidopsis thaliana chromosome I BA... 75 1e-050
gb|AC015446.4|AC015446 Arabidopsis thaliana chromosome I BA... 78 2e-050
gb|AF296832.1|T1M15 Arabidopsis thaliana BAC T1M15 73 7e-049
gb|AQ955228.1|AQ955228 LERAB10TR LERA Arabidopsis thaliana ... 68 1e-048
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 132 1e-048
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 132 1e-048
gb|DN604565.1|DN604565 JCAt4g23980 Arabidopsis Gateway cDNA... 193 1e-047
gb|AF007788.1|AF007788 Arabidopsis thaliana ETTIN gene, com... 68 1e-047
dbj|AB011483.1| Arabidopsis thaliana genomic DNA, chromosom... 65 5e-047
gb|AC069160.7|AC069160 Arabidopsis thaliana chromosome 1 BA... 78 7e-047
gb|AF325073.1|AF325073 Arabidopsis thaliana unknown protein... 154 8e-046
gb|AF336919.1| Arabidopsis thaliana clone C00034 (b) auxin ... 154 8e-046
ref|NM_128394.3| Arabidopsis thaliana ARF10; transcription ... 154 9e-046
gb|AC023279.2|AC023279 Genomic sequence for Arabidopsis tha... 77 1e-045
gb|AC023913.7|AC023913 Arabidopsis thaliana chromosome 1 BA... 81 1e-045
gb|AC007887.9|AC007887 Genomic sequence for Arabidopsis tha... 80 5e-045
gb|BX840815.1|BX840815 BX840815 Arabidopsis thaliana Flower... 111 2e-044
gb|BE523850.1|BE523850 M42D10STM Arabidopsis developing see... 178 2e-043
gb|U78721.3| Arabidopsis thaliana chromosome 2 clone T1B8 m... 68 1e-042
gb|AY091198.1| Arabidopsis thaliana putative transcription ... 149 3e-042
emb|BX828241.1|CNS0A2GB Arabidopsis thaliana Full-length cD... 149 4e-042
gb|AY059792.1| Arabidopsis thaliana putative transcription ... 149 5e-042
ref|NM_119154.3| Arabidopsis thaliana ARF16; transcription ... 149 5e-042
gb|AF099735.1|AF099735 Arabidopsis thaliana auxin response ... 151 6e-042
gb|AV528283.1|AV528283 AV528283 Arabidopsis thaliana aboveg... 169 7e-042
gb|CF651697.1|CF651697 05-L020577-066-004-I01-SP6P MPIZ-ADI... 164 4e-039
gb|AC025295.7|AC025295 Arabidopsis thaliana chromosome 1 BA... 78 7e-038
gb|AC006283.6| Arabidopsis thaliana chromosome 2 clone T1B3... 154 2e-037
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 154 5e-036
gb|BT002749.1| Arabidopsis thaliana clone C104833 auxin res... 131 7e-036
ref|NM_106434.1| Arabidopsis thaliana ARF17; transcription ... 131 8e-036
gb|AY056184.1| Arabidopsis thaliana auxin response factor A... 131 8e-036
emb|BX814425.1|CNS0AEKM Arabidopsis thaliana Full-length cD... 131 1e-035
emb|AL078464.1|ATF6G3 Arabidopsis thaliana DNA chromosome 4... 149 1e-034
gb|BX840901.1|BX840901 BX840901 Arabidopsis thaliana Flower... 149 2e-034
emb|AL161576.2|ATCHRIV72 Arabidopsis thaliana DNA chromosom... 149 2e-034
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 149 2e-034
gb|BX837695.1|BX837695 BX837695 Arabidopsis thaliana Hormon... 146 1e-033
gb|AC007454.3|F23M19 Arabidopsis thaliana chromosome 1 BAC ... 81 1e-033
gb|AC022314.5|AC022314 Genomic sequence for Arabidopsis tha... 79 3e-033
gb|AC012193.6|AC012193 Arabidopsis thaliana chromosome 1 BA... 131 7e-030
gb|AC009243.3|AC009243 Genomic sequence for Arabidopsis tha... 131 9e-030
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 131 4e-029
ref|NM_103522.1| Arabidopsis thaliana ARF23; transcription ... 97 2e-028
gb|BE523322.1|BE523322 M34C10STM Arabidopsis developing see... 92 1e-026
emb|AJ590274.1| Arabidopsis thaliana T-DNA flanking sequenc... 47 5e-026
emb|AJ595586.1| Arabidopsis thaliana T-DNA flanking sequenc... 114 6e-024
gb|B26404.1|B26404 F2G17TF IGF Arabidopsis thaliana genomic... 76 2e-022
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 103 9e-021
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 103 9e-021
gb|B11968.1|B11968 F2G17-T7 IGF Arabidopsis thaliana genomi... 69 1e-020
>ref|NM_180913.1| Arabidopsis thaliana ARF2 (AUXIN RESPONSE FACTOR 2); transcription
factor AT5G62000 (ARF2) transcript variant AT5G62000.1
mRNA, complete cds
Length = 3513
Score = 343 bits (744), Expect(3) = e-147
Identities = 139/149 (93%), Positives = 145/149 (97%)
Frame = +2 / +1
Query: 50 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIF 229
VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDM+RQPPTQELVAKDLH EWRFRHIF
Sbjct: 982 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIF 1161
Query: 230 RGQPRRHLLQSGWSVFVSAKRLGAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSH 409
RGQPRRHLLQSGWSVFVS+KRL AGDAFIFLRG++GELRVGVRRAMRQQ NVPSSVISSH
Sbjct: 1162 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSH 1341
Query: 410 SMHLGVLATAWHAVNTGTMFTVYYKPRTS 496
SMHLGVLATAWHA++TGTMFTVYYKPRTS
Sbjct: 1342 SMHLGVLATAWHAISTGTMFTVYYKPRTS 1428
Score = 177 bits (382), Expect(4) = 8e-072
Identities = 75/105 (71%), Positives = 82/105 (78%)
Frame = -2 / -2
Query: 495 LVLGL**TVNMVPVLTACHAVARTPRCMLWLDITEDGTFACCLMARLTPTRSSPLSPLRK 316
LVLGL**TVN+VPV ACHAVA TPRCMLWLDITEDGTF CC +ARLTPT +SP SPLR
Sbjct: 1427 LVLGL**TVNIVPVEMACHAVASTPRCMLWLDITEDGTFPCCRIARLTPTLNSPFSPLRN 1248
Query: 315 MKASPAPRRLALTKTLQPLCKRCLRG*PLNMWRKRHSTPCRSLAT 181
+ ASPA L LT TL PLC +CLRG*P N+ RHS C+S AT
Sbjct: 1247 INASPATSLLELTNTLHPLCSKCLRG*PRNICLNRHSFACKSFAT 1113
Score = 160 bits (344), Expect(3) = e-147
Identities = 61/98 (62%), Positives = 76/98 (77%)
Frame = +3 / +1
Query: 588 GEEAPEQRFTGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPP 767
GEEAPEQRFTGTIVG + D W +SKWR LKVRWDE SSIPRP+RVSPW++EPA++PP
Sbjct: 1519 GEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPP 1698
Query: 768 PINPLPVHRPKRPRSNAVASLPESSAPTKEAAPKVTLE 881
++P+P+ RPKRPRSN S P+SS T+E K ++
Sbjct: 1699 ALSPVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMD 1812
Score = 130 bits (279), Expect(2) = 3e-040
Identities = 65/156 (41%), Positives = 92/156 (58%)
Frame = -1 / -1
Query: 490 PRLVVDSKHGPSVNSMPCCSKNTKMHAVA*YY*RWNICLLPHGTPDSYTKLPTITS*KDE 311
P VVD KH P N MPC + +KMHA+A Y R ++ LL H TP + + + *K +
Sbjct: 1422 PGFVVDCKHSPC*NGMPCGGQYSKMHAMARYNRRRHVSLLSHRTPYTNS*FSILAP*KYK 1243
Query: 310 GISSTKTLGTNKNTPATLQKMPSWLTSEYVAKAPFHTMQVLGYKLLCWRLTGHIQWRKTL 131
I+ G NK+TP TL +MP WLT EY++++P MQ+L LL RL+ HIQ +T
Sbjct: 1242 RIACN*PFGANKHTPPTL*QMPPWLTPEYMSESPLICMQILCN*LLSGRLSRHIQRWETF 1063
Query: 130 ICMAPQHRESTMSAGIRGCQCLAEGVHAWPCKCSRR 23
I M+P++R+STM + Q AE +H P + +R
Sbjct: 1062 IRMSPKNRKSTMCTCVGCSQGFAERMHLEPRRWRKR 955
Score = 124 bits (266), Expect(3) = 4e-037
Identities = 58/157 (36%), Positives = 91/157 (57%)
Frame = +1 / +3
Query: 25 SCCTCKATRALLLQDIDSL*YQHSWWILGAAAPCR*VSSATGYDPSTSNTRACSQGPAWC 204
S T + A +LQ++D + ++++WWI + A C *+S +GY + S++R +G A
Sbjct: 957 SSSTSEVPGAFVLQNLDCIRHKYTWWIFCS*ATCG*MSPTSGYVSTASHSRVSCKGFACK 1136
Query: 205 GMALSPHIQRSTTKASFAEWLECFC*CQASWCWRCLHLSKR**WGASCRSQACHEAASKC 384
+A+ +I STT+A EW+EC C* Q + C RC+++SK W +AC K
Sbjct: 1137 *VAIQTYIPGSTTEAFATEWVECVC*LQKASCRRCVYISKGREWRIKSWCKACDATTRKR 1316
Query: 385 SIFSNIKPQHASWCSCYSMACC*HWDHVYCLLQA*DK 495
++F I P HASW + + MAC + D+VY LLQ D+
Sbjct: 1317 AVFCYI*P*HASWSTGHRMACHFNRDYVYSLLQTQDE 1427
Score = 72.1 bits (151), Expect(4) = 8e-072
Identities = 31/47 (65%), Positives = 35/47 (74%)
Frame = -1 / -2
Query: 736 GETLSGRGMEEASSHLTLR*RHLDSAHPA*SGSTFPTMVPVNLCSGA 596
G+TLSGRG+ E SSHLTLR H D H S S+ PT+VPVNLCSGA
Sbjct: 1667 GDTLSGRGILEVSSHLTLRDLHFDFGHLVGSDSSIPTIVPVNLCSGA 1527
Score = 62.0 bits (129), Expect(3) = e-147
Identities = 23/31 (74%), Positives = 28/31 (90%)
Frame = +1 / +1
Query: 496 SPAEFVVPCDRYMESLKRNYPIGMRFKMRFK 588
SP+EF+VP D+YMES+K NY IGMRFKMRF+
Sbjct: 1426 SPSEFIVPFDQYMESVKNNYSIGMRFKMRFE 1518
Score = 57.9 bits (120), Expect(2) = 3e-040
Identities = 28/66 (42%), Positives = 34/66 (51%)
Frame = -3 / -1
Query: 788 HWKRVDRGRADCRFYLPGRNPFRTWNGGSFIPPHLEVTPFRFSPSSLIRIHISNNGPSEP 609
HW R R+ Y P R R+ N S IP HLE +P F P S IR+ N+ S+P
Sbjct: 1719 HWNRTQSRRSKSWLYFPRRYSIRSRNTRSLIPSHLEGSPL*FWPPSRIRLFNPNDCASKP 1540
Query: 608 LFWSLF 591
L SLF
Sbjct: 1539 LLRSLF 1522
Score = 46.0 bits (94), Expect(3) = 4e-037
Identities = 30/68 (44%), Positives = 37/68 (54%)
Frame = +1 / +2
Query: 586 KVKRLQNKGSLGPLLEMWILIKLDGLNLNGVTSR*GGMKLPPFHVLKGFLPGK*NLQSAL 765
K KRL ++G L L + LI L G N +G SR* GM+L F L +L GK*+ L
Sbjct: 1517 KAKRLLSRGLLAQSLGLKSLILLGGQNQSGDPSR*DGMRLLVFLDLIEYLRGK*SQLLLL 1696
Query: 766 PLSTRFQC 789
L FQC
Sbjct: 1697 LL*VLFQC 1720
Score = 43.2 bits (88), Expect(4) = 8e-072
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = -2 / -2
Query: 126 AWRRSTENPP*VLVSEAVNVLQKECT 49
A R TENPP VLVS+AV VLQ ECT
Sbjct: 1058 ACRLRTENPPCVLVSDAVKVLQNECT 981
Score = 38.2 bits (77), Expect(4) = 8e-072
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / -1
Query: 585 KPHFKSHPYRVISFQ*FHIAITGNNKLSW 499
K HF+SH RV+ HI I NNKL W
Sbjct: 1515 KSHFESHANRVVILNRLHILIERNNKLRW 1429
Score = 25.4 bits (49), Expect(3) = 4e-037
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +2 / +2
Query: 503 LSLLFPVIAIWNH*NEITL*G*DLK*GLR 589
LSLLF I+IW+ TL *D K* L+
Sbjct: 1433 LSLLFRSISIWSLLRITTLLA*DSK*DLK 1519
>gb|BT000784.1| Arabidopsis thaliana clone RAFL07-10-G12 (R10939) auxin response
factor (At5g62000) mRNA, complete cds
Length = 3498
Score = 343 bits (744), Expect(3) = e-147
Identities = 139/149 (93%), Positives = 145/149 (97%)
Frame = +2 / +1
Query: 50 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIF 229
VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDM+RQPPTQELVAKDLH EWRFRHIF
Sbjct: 982 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIF 1161
Query: 230 RGQPRRHLLQSGWSVFVSAKRLGAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSH 409
RGQPRRHLLQSGWSVFVS+KRL AGDAFIFLRG++GELRVGVRRAMRQQ NVPSSVISSH
Sbjct: 1162 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSH 1341
Query: 410 SMHLGVLATAWHAVNTGTMFTVYYKPRTS 496
SMHLGVLATAWHA++TGTMFTVYYKPRTS
Sbjct: 1342 SMHLGVLATAWHAISTGTMFTVYYKPRTS 1428
Score = 177 bits (382), Expect(4) = 8e-072
Identities = 75/105 (71%), Positives = 82/105 (78%)
Frame = -2 / -2
Query: 495 LVLGL**TVNMVPVLTACHAVARTPRCMLWLDITEDGTFACCLMARLTPTRSSPLSPLRK 316
LVLGL**TVN+VPV ACHAVA TPRCMLWLDITEDGTF CC +ARLTPT +SP SPLR
Sbjct: 1427 LVLGL**TVNIVPVEMACHAVASTPRCMLWLDITEDGTFPCCRIARLTPTLNSPFSPLRN 1248
Query: 315 MKASPAPRRLALTKTLQPLCKRCLRG*PLNMWRKRHSTPCRSLAT 181
+ ASPA L LT TL PLC +CLRG*P N+ RHS C+S AT
Sbjct: 1247 INASPATSLLELTNTLHPLCSKCLRG*PRNICLNRHSFACKSFAT 1113
Score = 160 bits (344), Expect(3) = e-147
Identities = 61/98 (62%), Positives = 76/98 (77%)
Frame = +3 / +1
Query: 588 GEEAPEQRFTGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPP 767
GEEAPEQRFTGTIVG + D W +SKWR LKVRWDE SSIPRP+RVSPW++EPA++PP
Sbjct: 1519 GEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPP 1698
Query: 768 PINPLPVHRPKRPRSNAVASLPESSAPTKEAAPKVTLE 881
++P+P+ RPKRPRSN S P+SS T+E K ++
Sbjct: 1699 ALSPVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMD 1812
Score = 130 bits (279), Expect(2) = 3e-040
Identities = 65/156 (41%), Positives = 92/156 (58%)
Frame = -1 / -1
Query: 490 PRLVVDSKHGPSVNSMPCCSKNTKMHAVA*YY*RWNICLLPHGTPDSYTKLPTITS*KDE 311
P VVD KH P N MPC + +KMHA+A Y R ++ LL H TP + + + *K +
Sbjct: 1422 PGFVVDCKHSPC*NGMPCGGQYSKMHAMARYNRRRHVSLLSHRTPYTNS*FSILAP*KYK 1243
Query: 310 GISSTKTLGTNKNTPATLQKMPSWLTSEYVAKAPFHTMQVLGYKLLCWRLTGHIQWRKTL 131
I+ G NK+TP TL +MP WLT EY++++P MQ+L LL RL+ HIQ +T
Sbjct: 1242 RIACN*PFGANKHTPPTL*QMPPWLTPEYMSESPLICMQILCN*LLSGRLSRHIQRWETF 1063
Query: 130 ICMAPQHRESTMSAGIRGCQCLAEGVHAWPCKCSRR 23
I M+P++R+STM + Q AE +H P + +R
Sbjct: 1062 IRMSPKNRKSTMCTCVGCSQGFAERMHLEPRRWRKR 955
Score = 124 bits (266), Expect(3) = 4e-037
Identities = 58/157 (36%), Positives = 91/157 (57%)
Frame = +1 / +3
Query: 25 SCCTCKATRALLLQDIDSL*YQHSWWILGAAAPCR*VSSATGYDPSTSNTRACSQGPAWC 204
S T + A +LQ++D + ++++WWI + A C *+S +GY + S++R +G A
Sbjct: 957 SSSTSEVPGAFVLQNLDCIRHKYTWWIFCS*ATCG*MSPTSGYVSTASHSRVSCKGFACK 1136
Query: 205 GMALSPHIQRSTTKASFAEWLECFC*CQASWCWRCLHLSKR**WGASCRSQACHEAASKC 384
+A+ +I STT+A EW+EC C* Q + C RC+++SK W +AC K
Sbjct: 1137 *VAIQTYIPGSTTEAFATEWVECVC*LQKASCRRCVYISKGREWRIKSWCKACDATTRKR 1316
Query: 385 SIFSNIKPQHASWCSCYSMACC*HWDHVYCLLQA*DK 495
++F I P HASW + + MAC + D+VY LLQ D+
Sbjct: 1317 AVFCYI*P*HASWSTGHRMACHFNRDYVYSLLQTQDE 1427
Score = 72.1 bits (151), Expect(4) = 8e-072
Identities = 31/47 (65%), Positives = 35/47 (74%)
Frame = -1 / -2
Query: 736 GETLSGRGMEEASSHLTLR*RHLDSAHPA*SGSTFPTMVPVNLCSGA 596
G+TLSGRG+ E SSHLTLR H D H S S+ PT+VPVNLCSGA
Sbjct: 1667 GDTLSGRGILEVSSHLTLRDLHFDFGHLVGSDSSIPTIVPVNLCSGA 1527
Score = 62.0 bits (129), Expect(3) = e-147
Identities = 23/31 (74%), Positives = 28/31 (90%)
Frame = +1 / +1
Query: 496 SPAEFVVPCDRYMESLKRNYPIGMRFKMRFK 588
SP+EF+VP D+YMES+K NY IGMRFKMRF+
Sbjct: 1426 SPSEFIVPFDQYMESVKNNYSIGMRFKMRFE 1518
Score = 57.9 bits (120), Expect(2) = 3e-040
Identities = 28/66 (42%), Positives = 34/66 (51%)
Frame = -3 / -1
Query: 788 HWKRVDRGRADCRFYLPGRNPFRTWNGGSFIPPHLEVTPFRFSPSSLIRIHISNNGPSEP 609
HW R R+ Y P R R+ N S IP HLE +P F P S IR+ N+ S+P
Sbjct: 1719 HWNRTQSRRSKSWLYFPRRYSIRSRNTRSLIPSHLEGSPL*FWPPSRIRLFNPNDCASKP 1540
Query: 608 LFWSLF 591
L SLF
Sbjct: 1539 LLRSLF 1522
Score = 46.0 bits (94), Expect(3) = 4e-037
Identities = 30/68 (44%), Positives = 37/68 (54%)
Frame = +1 / +2
Query: 586 KVKRLQNKGSLGPLLEMWILIKLDGLNLNGVTSR*GGMKLPPFHVLKGFLPGK*NLQSAL 765
K KRL ++G L L + LI L G N +G SR* GM+L F L +L GK*+ L
Sbjct: 1517 KAKRLLSRGLLAQSLGLKSLILLGGQNQSGDPSR*DGMRLLVFLDLIEYLRGK*SQLLLL 1696
Query: 766 PLSTRFQC 789
L FQC
Sbjct: 1697 LL*VLFQC 1720
Score = 43.2 bits (88), Expect(4) = 8e-072
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = -2 / -2
Query: 126 AWRRSTENPP*VLVSEAVNVLQKECT 49
A R TENPP VLVS+AV VLQ ECT
Sbjct: 1058 ACRLRTENPPCVLVSDAVKVLQNECT 981
Score = 38.2 bits (77), Expect(4) = 8e-072
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / -1
Query: 585 KPHFKSHPYRVISFQ*FHIAITGNNKLSW 499
K HF+SH RV+ HI I NNKL W
Sbjct: 1515 KSHFESHANRVVILNRLHILIERNNKLRW 1429
Score = 25.4 bits (49), Expect(3) = 4e-037
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +2 / +2
Query: 503 LSLLFPVIAIWNH*NEITL*G*DLK*GLR 589
LSLLF I+IW+ TL *D K* L+
Sbjct: 1433 LSLLFRSISIWSLLRITTLLA*DSK*DLK 1519
>ref|NM_203251.1| Arabidopsis thaliana ARF2 (AUXIN RESPONSE FACTOR 2) AT5G62000 (ARF2)
transcript variant AT5G62000.3 mRNA, complete cds
Length = 3387
Score = 343 bits (744), Expect(3) = e-147
Identities = 139/149 (93%), Positives = 145/149 (97%)
Frame = +2 / +1
Query: 50 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIF 229
VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDM+RQPPTQELVAKDLH EWRFRHIF
Sbjct: 856 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIF 1035
Query: 230 RGQPRRHLLQSGWSVFVSAKRLGAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSH 409
RGQPRRHLLQSGWSVFVS+KRL AGDAFIFLRG++GELRVGVRRAMRQQ NVPSSVISSH
Sbjct: 1036 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSH 1215
Query: 410 SMHLGVLATAWHAVNTGTMFTVYYKPRTS 496
SMHLGVLATAWHA++TGTMFTVYYKPRTS
Sbjct: 1216 SMHLGVLATAWHAISTGTMFTVYYKPRTS 1302
Score = 177 bits (382), Expect(4) = 8e-072
Identities = 75/105 (71%), Positives = 82/105 (78%)
Frame = -2 / -2
Query: 495 LVLGL**TVNMVPVLTACHAVARTPRCMLWLDITEDGTFACCLMARLTPTRSSPLSPLRK 316
LVLGL**TVN+VPV ACHAVA TPRCMLWLDITEDGTF CC +ARLTPT +SP SPLR
Sbjct: 1301 LVLGL**TVNIVPVEMACHAVASTPRCMLWLDITEDGTFPCCRIARLTPTLNSPFSPLRN 1122
Query: 315 MKASPAPRRLALTKTLQPLCKRCLRG*PLNMWRKRHSTPCRSLAT 181
+ ASPA L LT TL PLC +CLRG*P N+ RHS C+S AT
Sbjct: 1121 INASPATSLLELTNTLHPLCSKCLRG*PRNICLNRHSFACKSFAT 987
Score = 160 bits (344), Expect(3) = e-147
Identities = 61/98 (62%), Positives = 76/98 (77%)
Frame = +3 / +1
Query: 588 GEEAPEQRFTGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPP 767
GEEAPEQRFTGTIVG + D W +SKWR LKVRWDE SSIPRP+RVSPW++EPA++PP
Sbjct: 1393 GEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPP 1572
Query: 768 PINPLPVHRPKRPRSNAVASLPESSAPTKEAAPKVTLE 881
++P+P+ RPKRPRSN S P+SS T+E K ++
Sbjct: 1573 ALSPVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMD 1686
Score = 130 bits (279), Expect(2) = 3e-040
Identities = 65/156 (41%), Positives = 92/156 (58%)
Frame = -1 / -1
Query: 490 PRLVVDSKHGPSVNSMPCCSKNTKMHAVA*YY*RWNICLLPHGTPDSYTKLPTITS*KDE 311
P VVD KH P N MPC + +KMHA+A Y R ++ LL H TP + + + *K +
Sbjct: 1296 PGFVVDCKHSPC*NGMPCGGQYSKMHAMARYNRRRHVSLLSHRTPYTNS*FSILAP*KYK 1117
Query: 310 GISSTKTLGTNKNTPATLQKMPSWLTSEYVAKAPFHTMQVLGYKLLCWRLTGHIQWRKTL 131
I+ G NK+TP TL +MP WLT EY++++P MQ+L LL RL+ HIQ +T
Sbjct: 1116 RIACN*PFGANKHTPPTL*QMPPWLTPEYMSESPLICMQILCN*LLSGRLSRHIQRWETF 937
Query: 130 ICMAPQHRESTMSAGIRGCQCLAEGVHAWPCKCSRR 23
I M+P++R+STM + Q AE +H P + +R
Sbjct: 936 IRMSPKNRKSTMCTCVGCSQGFAERMHLEPRRWRKR 829
Score = 124 bits (266), Expect(3) = 4e-037
Identities = 58/157 (36%), Positives = 91/157 (57%)
Frame = +1 / +3
Query: 25 SCCTCKATRALLLQDIDSL*YQHSWWILGAAAPCR*VSSATGYDPSTSNTRACSQGPAWC 204
S T + A +LQ++D + ++++WWI + A C *+S +GY + S++R +G A
Sbjct: 831 SSSTSEVPGAFVLQNLDCIRHKYTWWIFCS*ATCG*MSPTSGYVSTASHSRVSCKGFACK 1010
Query: 205 GMALSPHIQRSTTKASFAEWLECFC*CQASWCWRCLHLSKR**WGASCRSQACHEAASKC 384
+A+ +I STT+A EW+EC C* Q + C RC+++SK W +AC K
Sbjct: 1011 *VAIQTYIPGSTTEAFATEWVECVC*LQKASCRRCVYISKGREWRIKSWCKACDATTRKR 1190
Query: 385 SIFSNIKPQHASWCSCYSMACC*HWDHVYCLLQA*DK 495
++F I P HASW + + MAC + D+VY LLQ D+
Sbjct: 1191 AVFCYI*P*HASWSTGHRMACHFNRDYVYSLLQTQDE 1301
Score = 72.1 bits (151), Expect(4) = 8e-072
Identities = 31/47 (65%), Positives = 35/47 (74%)
Frame = -1 / -2
Query: 736 GETLSGRGMEEASSHLTLR*RHLDSAHPA*SGSTFPTMVPVNLCSGA 596
G+TLSGRG+ E SSHLTLR H D H S S+ PT+VPVNLCSGA
Sbjct: 1541 GDTLSGRGILEVSSHLTLRDLHFDFGHLVGSDSSIPTIVPVNLCSGA 1401
Score = 62.0 bits (129), Expect(3) = e-147
Identities = 23/31 (74%), Positives = 28/31 (90%)
Frame = +1 / +1
Query: 496 SPAEFVVPCDRYMESLKRNYPIGMRFKMRFK 588
SP+EF+VP D+YMES+K NY IGMRFKMRF+
Sbjct: 1300 SPSEFIVPFDQYMESVKNNYSIGMRFKMRFE 1392
Score = 57.9 bits (120), Expect(2) = 3e-040
Identities = 28/66 (42%), Positives = 34/66 (51%)
Frame = -3 / -1
Query: 788 HWKRVDRGRADCRFYLPGRNPFRTWNGGSFIPPHLEVTPFRFSPSSLIRIHISNNGPSEP 609
HW R R+ Y P R R+ N S IP HLE +P F P S IR+ N+ S+P
Sbjct: 1593 HWNRTQSRRSKSWLYFPRRYSIRSRNTRSLIPSHLEGSPL*FWPPSRIRLFNPNDCASKP 1414
Query: 608 LFWSLF 591
L SLF
Sbjct: 1413 LLRSLF 1396
Score = 46.0 bits (94), Expect(3) = 4e-037
Identities = 30/68 (44%), Positives = 37/68 (54%)
Frame = +1 / +2
Query: 586 KVKRLQNKGSLGPLLEMWILIKLDGLNLNGVTSR*GGMKLPPFHVLKGFLPGK*NLQSAL 765
K KRL ++G L L + LI L G N +G SR* GM+L F L +L GK*+ L
Sbjct: 1391 KAKRLLSRGLLAQSLGLKSLILLGGQNQSGDPSR*DGMRLLVFLDLIEYLRGK*SQLLLL 1570
Query: 766 PLSTRFQC 789
L FQC
Sbjct: 1571 LL*VLFQC 1594
Score = 43.2 bits (88), Expect(4) = 8e-072
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = -2 / -2
Query: 126 AWRRSTENPP*VLVSEAVNVLQKECT 49
A R TENPP VLVS+AV VLQ ECT
Sbjct: 932 ACRLRTENPPCVLVSDAVKVLQNECT 855
Score = 38.2 bits (77), Expect(4) = 8e-072
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / -1
Query: 585 KPHFKSHPYRVISFQ*FHIAITGNNKLSW 499
K HF+SH RV+ HI I NNKL W
Sbjct: 1389 KSHFESHANRVVILNRLHILIERNNKLRW 1303
Score = 25.4 bits (49), Expect(3) = 4e-037
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +2 / +2
Query: 503 LSLLFPVIAIWNH*NEITL*G*DLK*GLR 589
LSLLF I+IW+ TL *D K* L+
Sbjct: 1307 LSLLFRSISIWSLLRITTLLA*DSK*DLK 1393
>emb|CS165494.1| Sequence 2 from Patent WO2005085453
Length = 3384
Score = 343 bits (744), Expect(3) = e-147
Identities = 139/149 (93%), Positives = 145/149 (97%)
Frame = +2 / +1
Query: 50 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIF 229
VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDM+RQPPTQELVAKDLH EWRFRHIF
Sbjct: 856 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIF 1035
Query: 230 RGQPRRHLLQSGWSVFVSAKRLGAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSH 409
RGQPRRHLLQSGWSVFVS+KRL AGDAFIFLRG++GELRVGVRRAMRQQ NVPSSVISSH
Sbjct: 1036 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSH 1215
Query: 410 SMHLGVLATAWHAVNTGTMFTVYYKPRTS 496
SMHLGVLATAWHA++TGTMFTVYYKPRTS
Sbjct: 1216 SMHLGVLATAWHAISTGTMFTVYYKPRTS 1302
Score = 177 bits (382), Expect(4) = 8e-072
Identities = 75/105 (71%), Positives = 82/105 (78%)
Frame = -2 / -2
Query: 495 LVLGL**TVNMVPVLTACHAVARTPRCMLWLDITEDGTFACCLMARLTPTRSSPLSPLRK 316
LVLGL**TVN+VPV ACHAVA TPRCMLWLDITEDGTF CC +ARLTPT +SP SPLR
Sbjct: 1301 LVLGL**TVNIVPVEMACHAVASTPRCMLWLDITEDGTFPCCRIARLTPTLNSPFSPLRN 1122
Query: 315 MKASPAPRRLALTKTLQPLCKRCLRG*PLNMWRKRHSTPCRSLAT 181
+ ASPA L LT TL PLC +CLRG*P N+ RHS C+S AT
Sbjct: 1121 INASPATSLLELTNTLHPLCSKCLRG*PRNICLNRHSFACKSFAT 987
Score = 160 bits (344), Expect(3) = e-147
Identities = 61/98 (62%), Positives = 76/98 (77%)
Frame = +3 / +1
Query: 588 GEEAPEQRFTGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPP 767
GEEAPEQRFTGTIVG + D W +SKWR LKVRWDE SSIPRP+RVSPW++EPA++PP
Sbjct: 1393 GEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPP 1572
Query: 768 PINPLPVHRPKRPRSNAVASLPESSAPTKEAAPKVTLE 881
++P+P+ RPKRPRSN S P+SS T+E K ++
Sbjct: 1573 ALSPVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMD 1686
Score = 130 bits (279), Expect(2) = 3e-040
Identities = 65/156 (41%), Positives = 92/156 (58%)
Frame = -1 / -1
Query: 490 PRLVVDSKHGPSVNSMPCCSKNTKMHAVA*YY*RWNICLLPHGTPDSYTKLPTITS*KDE 311
P VVD KH P N MPC + +KMHA+A Y R ++ LL H TP + + + *K +
Sbjct: 1296 PGFVVDCKHSPC*NGMPCGGQYSKMHAMARYNRRRHVSLLSHRTPYTNS*FSILAP*KYK 1117
Query: 310 GISSTKTLGTNKNTPATLQKMPSWLTSEYVAKAPFHTMQVLGYKLLCWRLTGHIQWRKTL 131
I+ G NK+TP TL +MP WLT EY++++P MQ+L LL RL+ HIQ +T
Sbjct: 1116 RIACN*PFGANKHTPPTL*QMPPWLTPEYMSESPLICMQILCN*LLSGRLSRHIQRWETF 937
Query: 130 ICMAPQHRESTMSAGIRGCQCLAEGVHAWPCKCSRR 23
I M+P++R+STM + Q AE +H P + +R
Sbjct: 936 IRMSPKNRKSTMCTCVGCSQGFAERMHLEPRRWRKR 829
Score = 124 bits (266), Expect(3) = 4e-037
Identities = 58/157 (36%), Positives = 91/157 (57%)
Frame = +1 / +3
Query: 25 SCCTCKATRALLLQDIDSL*YQHSWWILGAAAPCR*VSSATGYDPSTSNTRACSQGPAWC 204
S T + A +LQ++D + ++++WWI + A C *+S +GY + S++R +G A
Sbjct: 831 SSSTSEVPGAFVLQNLDCIRHKYTWWIFCS*ATCG*MSPTSGYVSTASHSRVSCKGFACK 1010
Query: 205 GMALSPHIQRSTTKASFAEWLECFC*CQASWCWRCLHLSKR**WGASCRSQACHEAASKC 384
+A+ +I STT+A EW+EC C* Q + C RC+++SK W +AC K
Sbjct: 1011 *VAIQTYIPGSTTEAFATEWVECVC*LQKASCRRCVYISKGREWRIKSWCKACDATTRKR 1190
Query: 385 SIFSNIKPQHASWCSCYSMACC*HWDHVYCLLQA*DK 495
++F I P HASW + + MAC + D+VY LLQ D+
Sbjct: 1191 AVFCYI*P*HASWSTGHRMACHFNRDYVYSLLQTQDE 1301
Score = 72.1 bits (151), Expect(4) = 8e-072
Identities = 31/47 (65%), Positives = 35/47 (74%)
Frame = -1 / -2
Query: 736 GETLSGRGMEEASSHLTLR*RHLDSAHPA*SGSTFPTMVPVNLCSGA 596
G+TLSGRG+ E SSHLTLR H D H S S+ PT+VPVNLCSGA
Sbjct: 1541 GDTLSGRGILEVSSHLTLRDLHFDFGHLVGSDSSIPTIVPVNLCSGA 1401
Score = 62.0 bits (129), Expect(3) = e-147
Identities = 23/31 (74%), Positives = 28/31 (90%)
Frame = +1 / +1
Query: 496 SPAEFVVPCDRYMESLKRNYPIGMRFKMRFK 588
SP+EF+VP D+YMES+K NY IGMRFKMRF+
Sbjct: 1300 SPSEFIVPFDQYMESVKNNYSIGMRFKMRFE 1392
Score = 57.9 bits (120), Expect(2) = 3e-040
Identities = 28/66 (42%), Positives = 34/66 (51%)
Frame = -3 / -1
Query: 788 HWKRVDRGRADCRFYLPGRNPFRTWNGGSFIPPHLEVTPFRFSPSSLIRIHISNNGPSEP 609
HW R R+ Y P R R+ N S IP HLE +P F P S IR+ N+ S+P
Sbjct: 1593 HWNRTQSRRSKSWLYFPRRYSIRSRNTRSLIPSHLEGSPL*FWPPSRIRLFNPNDCASKP 1414
Query: 608 LFWSLF 591
L SLF
Sbjct: 1413 LLRSLF 1396
Score = 46.0 bits (94), Expect(3) = 4e-037
Identities = 30/68 (44%), Positives = 37/68 (54%)
Frame = +1 / +2
Query: 586 KVKRLQNKGSLGPLLEMWILIKLDGLNLNGVTSR*GGMKLPPFHVLKGFLPGK*NLQSAL 765
K KRL ++G L L + LI L G N +G SR* GM+L F L +L GK*+ L
Sbjct: 1391 KAKRLLSRGLLAQSLGLKSLILLGGQNQSGDPSR*DGMRLLVFLDLIEYLRGK*SQLLLL 1570
Query: 766 PLSTRFQC 789
L FQC
Sbjct: 1571 LL*VLFQC 1594
Score = 43.2 bits (88), Expect(4) = 8e-072
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = -2 / -2
Query: 126 AWRRSTENPP*VLVSEAVNVLQKECT 49
A R TENPP VLVS+AV VLQ ECT
Sbjct: 932 ACRLRTENPPCVLVSDAVKVLQNECT 855
Score = 38.2 bits (77), Expect(4) = 8e-072
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / -1
Query: 585 KPHFKSHPYRVISFQ*FHIAITGNNKLSW 499
K HF+SH RV+ HI I NNKL W
Sbjct: 1389 KSHFESHANRVVILNRLHILIERNNKLRW 1303
Score = 25.4 bits (49), Expect(3) = 4e-037
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +2 / +2
Query: 503 LSLLFPVIAIWNH*NEITL*G*DLK*GLR 589
LSLLF I+IW+ TL *D K* L+
Sbjct: 1307 LSLLFRSISIWSLLRITTLLA*DSK*DLK 1393
>ref|NM_125593.2| Arabidopsis thaliana ARF2 (AUXIN RESPONSE FACTOR 2); transcription
factor AT5G62000 (ARF2) transcript variant AT5G62000.2
mRNA, complete cds
Length = 3384
Score = 343 bits (744), Expect(3) = e-147
Identities = 139/149 (93%), Positives = 145/149 (97%)
Frame = +2 / +1
Query: 50 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIF 229
VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDM+RQPPTQELVAKDLH EWRFRHIF
Sbjct: 856 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIF 1035
Query: 230 RGQPRRHLLQSGWSVFVSAKRLGAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSH 409
RGQPRRHLLQSGWSVFVS+KRL AGDAFIFLRG++GELRVGVRRAMRQQ NVPSSVISSH
Sbjct: 1036 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSH 1215
Query: 410 SMHLGVLATAWHAVNTGTMFTVYYKPRTS 496
SMHLGVLATAWHA++TGTMFTVYYKPRTS
Sbjct: 1216 SMHLGVLATAWHAISTGTMFTVYYKPRTS 1302
Score = 177 bits (382), Expect(4) = 8e-072
Identities = 75/105 (71%), Positives = 82/105 (78%)
Frame = -2 / -2
Query: 495 LVLGL**TVNMVPVLTACHAVARTPRCMLWLDITEDGTFACCLMARLTPTRSSPLSPLRK 316
LVLGL**TVN+VPV ACHAVA TPRCMLWLDITEDGTF CC +ARLTPT +SP SPLR
Sbjct: 1301 LVLGL**TVNIVPVEMACHAVASTPRCMLWLDITEDGTFPCCRIARLTPTLNSPFSPLRN 1122
Query: 315 MKASPAPRRLALTKTLQPLCKRCLRG*PLNMWRKRHSTPCRSLAT 181
+ ASPA L LT TL PLC +CLRG*P N+ RHS C+S AT
Sbjct: 1121 INASPATSLLELTNTLHPLCSKCLRG*PRNICLNRHSFACKSFAT 987
Score = 160 bits (344), Expect(3) = e-147
Identities = 61/98 (62%), Positives = 76/98 (77%)
Frame = +3 / +1
Query: 588 GEEAPEQRFTGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPP 767
GEEAPEQRFTGTIVG + D W +SKWR LKVRWDE SSIPRP+RVSPW++EPA++PP
Sbjct: 1393 GEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPP 1572
Query: 768 PINPLPVHRPKRPRSNAVASLPESSAPTKEAAPKVTLE 881
++P+P+ RPKRPRSN S P+SS T+E K ++
Sbjct: 1573 ALSPVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMD 1686
Score = 130 bits (279), Expect(2) = 3e-040
Identities = 65/156 (41%), Positives = 92/156 (58%)
Frame = -1 / -1
Query: 490 PRLVVDSKHGPSVNSMPCCSKNTKMHAVA*YY*RWNICLLPHGTPDSYTKLPTITS*KDE 311
P VVD KH P N MPC + +KMHA+A Y R ++ LL H TP + + + *K +
Sbjct: 1296 PGFVVDCKHSPC*NGMPCGGQYSKMHAMARYNRRRHVSLLSHRTPYTNS*FSILAP*KYK 1117
Query: 310 GISSTKTLGTNKNTPATLQKMPSWLTSEYVAKAPFHTMQVLGYKLLCWRLTGHIQWRKTL 131
I+ G NK+TP TL +MP WLT EY++++P MQ+L LL RL+ HIQ +T
Sbjct: 1116 RIACN*PFGANKHTPPTL*QMPPWLTPEYMSESPLICMQILCN*LLSGRLSRHIQRWETF 937
Query: 130 ICMAPQHRESTMSAGIRGCQCLAEGVHAWPCKCSRR 23
I M+P++R+STM + Q AE +H P + +R
Sbjct: 936 IRMSPKNRKSTMCTCVGCSQGFAERMHLEPRRWRKR 829
Score = 124 bits (266), Expect(3) = 4e-037
Identities = 58/157 (36%), Positives = 91/157 (57%)
Frame = +1 / +3
Query: 25 SCCTCKATRALLLQDIDSL*YQHSWWILGAAAPCR*VSSATGYDPSTSNTRACSQGPAWC 204
S T + A +LQ++D + ++++WWI + A C *+S +GY + S++R +G A
Sbjct: 831 SSSTSEVPGAFVLQNLDCIRHKYTWWIFCS*ATCG*MSPTSGYVSTASHSRVSCKGFACK 1010
Query: 205 GMALSPHIQRSTTKASFAEWLECFC*CQASWCWRCLHLSKR**WGASCRSQACHEAASKC 384
+A+ +I STT+A EW+EC C* Q + C RC+++SK W +AC K
Sbjct: 1011 *VAIQTYIPGSTTEAFATEWVECVC*LQKASCRRCVYISKGREWRIKSWCKACDATTRKR 1190
Query: 385 SIFSNIKPQHASWCSCYSMACC*HWDHVYCLLQA*DK 495
++F I P HASW + + MAC + D+VY LLQ D+
Sbjct: 1191 AVFCYI*P*HASWSTGHRMACHFNRDYVYSLLQTQDE 1301
Score = 72.1 bits (151), Expect(4) = 8e-072
Identities = 31/47 (65%), Positives = 35/47 (74%)
Frame = -1 / -2
Query: 736 GETLSGRGMEEASSHLTLR*RHLDSAHPA*SGSTFPTMVPVNLCSGA 596
G+TLSGRG+ E SSHLTLR H D H S S+ PT+VPVNLCSGA
Sbjct: 1541 GDTLSGRGILEVSSHLTLRDLHFDFGHLVGSDSSIPTIVPVNLCSGA 1401
Score = 62.0 bits (129), Expect(3) = e-147
Identities = 23/31 (74%), Positives = 28/31 (90%)
Frame = +1 / +1
Query: 496 SPAEFVVPCDRYMESLKRNYPIGMRFKMRFK 588
SP+EF+VP D+YMES+K NY IGMRFKMRF+
Sbjct: 1300 SPSEFIVPFDQYMESVKNNYSIGMRFKMRFE 1392
Score = 57.9 bits (120), Expect(2) = 3e-040
Identities = 28/66 (42%), Positives = 34/66 (51%)
Frame = -3 / -1
Query: 788 HWKRVDRGRADCRFYLPGRNPFRTWNGGSFIPPHLEVTPFRFSPSSLIRIHISNNGPSEP 609
HW R R+ Y P R R+ N S IP HLE +P F P S IR+ N+ S+P
Sbjct: 1593 HWNRTQSRRSKSWLYFPRRYSIRSRNTRSLIPSHLEGSPL*FWPPSRIRLFNPNDCASKP 1414
Query: 608 LFWSLF 591
L SLF
Sbjct: 1413 LLRSLF 1396
Score = 46.0 bits (94), Expect(3) = 4e-037
Identities = 30/68 (44%), Positives = 37/68 (54%)
Frame = +1 / +2
Query: 586 KVKRLQNKGSLGPLLEMWILIKLDGLNLNGVTSR*GGMKLPPFHVLKGFLPGK*NLQSAL 765
K KRL ++G L L + LI L G N +G SR* GM+L F L +L GK*+ L
Sbjct: 1391 KAKRLLSRGLLAQSLGLKSLILLGGQNQSGDPSR*DGMRLLVFLDLIEYLRGK*SQLLLL 1570
Query: 766 PLSTRFQC 789
L FQC
Sbjct: 1571 LL*VLFQC 1594
Score = 43.2 bits (88), Expect(4) = 8e-072
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = -2 / -2
Query: 126 AWRRSTENPP*VLVSEAVNVLQKECT 49
A R TENPP VLVS+AV VLQ ECT
Sbjct: 932 ACRLRTENPPCVLVSDAVKVLQNECT 855
Score = 38.2 bits (77), Expect(4) = 8e-072
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / -1
Query: 585 KPHFKSHPYRVISFQ*FHIAITGNNKLSW 499
K HF+SH RV+ HI I NNKL W
Sbjct: 1389 KSHFESHANRVVILNRLHILIERNNKLRW 1303
Score = 25.4 bits (49), Expect(3) = 4e-037
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +2 / +2
Query: 503 LSLLFPVIAIWNH*NEITL*G*DLK*GLR 589
LSLLF I+IW+ TL *D K* L+
Sbjct: 1307 LSLLFRSISIWSLLRITTLLA*DSK*DLK 1393
>dbj|AK221305.1| Arabidopsis thaliana mRNA for ARF1-binding protein, complete cds,
clone: RAFL24-31-F22
Length = 3335
Score = 343 bits (744), Expect(3) = e-147
Identities = 139/149 (93%), Positives = 145/149 (97%)
Frame = +2 / +1
Query: 50 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIF 229
VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDM+RQPPTQELVAKDLH EWRFRHIF
Sbjct: 790 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIF 969
Query: 230 RGQPRRHLLQSGWSVFVSAKRLGAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSH 409
RGQPRRHLLQSGWSVFVS+KRL AGDAFIFLRG++GELRVGVRRAMRQQ NVPSSVISSH
Sbjct: 970 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSH 1149
Query: 410 SMHLGVLATAWHAVNTGTMFTVYYKPRTS 496
SMHLGVLATAWHA++TGTMFTVYYKPRTS
Sbjct: 1150 SMHLGVLATAWHAISTGTMFTVYYKPRTS 1236
Score = 177 bits (382), Expect(4) = 8e-072
Identities = 75/105 (71%), Positives = 82/105 (78%)
Frame = -2 / -1
Query: 495 LVLGL**TVNMVPVLTACHAVARTPRCMLWLDITEDGTFACCLMARLTPTRSSPLSPLRK 316
LVLGL**TVN+VPV ACHAVA TPRCMLWLDITEDGTF CC +ARLTPT +SP SPLR
Sbjct: 1235 LVLGL**TVNIVPVEMACHAVASTPRCMLWLDITEDGTFPCCRIARLTPTLNSPFSPLRN 1056
Query: 315 MKASPAPRRLALTKTLQPLCKRCLRG*PLNMWRKRHSTPCRSLAT 181
+ ASPA L LT TL PLC +CLRG*P N+ RHS C+S AT
Sbjct: 1055 INASPATSLLELTNTLHPLCSKCLRG*PRNICLNRHSFACKSFAT 921
Score = 160 bits (344), Expect(3) = e-147
Identities = 61/98 (62%), Positives = 76/98 (77%)
Frame = +3 / +1
Query: 588 GEEAPEQRFTGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPP 767
GEEAPEQRFTGTIVG + D W +SKWR LKVRWDE SSIPRP+RVSPW++EPA++PP
Sbjct: 1327 GEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPP 1506
Query: 768 PINPLPVHRPKRPRSNAVASLPESSAPTKEAAPKVTLE 881
++P+P+ RPKRPRSN S P+SS T+E K ++
Sbjct: 1507 ALSPVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMD 1620
Score = 130 bits (279), Expect(2) = 3e-040
Identities = 65/156 (41%), Positives = 92/156 (58%)
Frame = -1 / -3
Query: 490 PRLVVDSKHGPSVNSMPCCSKNTKMHAVA*YY*RWNICLLPHGTPDSYTKLPTITS*KDE 311
P VVD KH P N MPC + +KMHA+A Y R ++ LL H TP + + + *K +
Sbjct: 1230 PGFVVDCKHSPC*NGMPCGGQYSKMHAMARYNRRRHVSLLSHRTPYTNS*FSILAP*KYK 1051
Query: 310 GISSTKTLGTNKNTPATLQKMPSWLTSEYVAKAPFHTMQVLGYKLLCWRLTGHIQWRKTL 131
I+ G NK+TP TL +MP WLT EY++++P MQ+L LL RL+ HIQ +T
Sbjct: 1050 RIACN*PFGANKHTPPTL*QMPPWLTPEYMSESPLICMQILCN*LLSGRLSRHIQRWETF 871
Query: 130 ICMAPQHRESTMSAGIRGCQCLAEGVHAWPCKCSRR 23
I M+P++R+STM + Q AE +H P + +R
Sbjct: 870 IRMSPKNRKSTMCTCVGCSQGFAERMHLEPRRWRKR 763
Score = 124 bits (266), Expect(3) = 4e-037
Identities = 58/157 (36%), Positives = 91/157 (57%)
Frame = +1 / +3
Query: 25 SCCTCKATRALLLQDIDSL*YQHSWWILGAAAPCR*VSSATGYDPSTSNTRACSQGPAWC 204
S T + A +LQ++D + ++++WWI + A C *+S +GY + S++R +G A
Sbjct: 765 SSSTSEVPGAFVLQNLDCIRHKYTWWIFCS*ATCG*MSPTSGYVSTASHSRVSCKGFACK 944
Query: 205 GMALSPHIQRSTTKASFAEWLECFC*CQASWCWRCLHLSKR**WGASCRSQACHEAASKC 384
+A+ +I STT+A EW+EC C* Q + C RC+++SK W +AC K
Sbjct: 945 *VAIQTYIPGSTTEAFATEWVECVC*LQKASCRRCVYISKGREWRIKSWCKACDATTRKR 1124
Query: 385 SIFSNIKPQHASWCSCYSMACC*HWDHVYCLLQA*DK 495
++F I P HASW + + MAC + D+VY LLQ D+
Sbjct: 1125 AVFCYI*P*HASWSTGHRMACHFNRDYVYSLLQTQDE 1235
Score = 72.1 bits (151), Expect(4) = 8e-072
Identities = 31/47 (65%), Positives = 35/47 (74%)
Frame = -1 / -1
Query: 736 GETLSGRGMEEASSHLTLR*RHLDSAHPA*SGSTFPTMVPVNLCSGA 596
G+TLSGRG+ E SSHLTLR H D H S S+ PT+VPVNLCSGA
Sbjct: 1475 GDTLSGRGILEVSSHLTLRDLHFDFGHLVGSDSSIPTIVPVNLCSGA 1335
Score = 62.0 bits (129), Expect(3) = e-147
Identities = 23/31 (74%), Positives = 28/31 (90%)
Frame = +1 / +1
Query: 496 SPAEFVVPCDRYMESLKRNYPIGMRFKMRFK 588
SP+EF+VP D+YMES+K NY IGMRFKMRF+
Sbjct: 1234 SPSEFIVPFDQYMESVKNNYSIGMRFKMRFE 1326
Score = 57.9 bits (120), Expect(2) = 3e-040
Identities = 28/66 (42%), Positives = 34/66 (51%)
Frame = -3 / -3
Query: 788 HWKRVDRGRADCRFYLPGRNPFRTWNGGSFIPPHLEVTPFRFSPSSLIRIHISNNGPSEP 609
HW R R+ Y P R R+ N S IP HLE +P F P S IR+ N+ S+P
Sbjct: 1527 HWNRTQSRRSKSWLYFPRRYSIRSRNTRSLIPSHLEGSPL*FWPPSRIRLFNPNDCASKP 1348
Query: 608 LFWSLF 591
L SLF
Sbjct: 1347 LLRSLF 1330
Score = 46.0 bits (94), Expect(3) = 4e-037
Identities = 30/68 (44%), Positives = 37/68 (54%)
Frame = +1 / +2
Query: 586 KVKRLQNKGSLGPLLEMWILIKLDGLNLNGVTSR*GGMKLPPFHVLKGFLPGK*NLQSAL 765
K KRL ++G L L + LI L G N +G SR* GM+L F L +L GK*+ L
Sbjct: 1325 KAKRLLSRGLLAQSLGLKSLILLGGQNQSGDPSR*DGMRLLVFLDLIEYLRGK*SQLLLL 1504
Query: 766 PLSTRFQC 789
L FQC
Sbjct: 1505 LL*VLFQC 1528
Score = 43.2 bits (88), Expect(4) = 8e-072
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = -2 / -1
Query: 126 AWRRSTENPP*VLVSEAVNVLQKECT 49
A R TENPP VLVS+AV VLQ ECT
Sbjct: 866 ACRLRTENPPCVLVSDAVKVLQNECT 789
Score = 38.2 bits (77), Expect(4) = 8e-072
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / -3
Query: 585 KPHFKSHPYRVISFQ*FHIAITGNNKLSW 499
K HF+SH RV+ HI I NNKL W
Sbjct: 1323 KSHFESHANRVVILNRLHILIERNNKLRW 1237
Score = 25.4 bits (49), Expect(3) = 4e-037
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +2 / +2
Query: 503 LSLLFPVIAIWNH*NEITL*G*DLK*GLR 589
LSLLF I+IW+ TL *D K* L+
Sbjct: 1241 LSLLFRSISIWSLLRITTLLA*DSK*DLK 1327
>dbj|AK221252.1| Arabidopsis thaliana mRNA for ARF1-binding protein, complete cds,
clone: RAFL24-07-O11
Length = 3317
Score = 343 bits (744), Expect(3) = e-147
Identities = 139/149 (93%), Positives = 145/149 (97%)
Frame = +2 / +3
Query: 50 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIF 229
VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDM+RQPPTQELVAKDLH EWRFRHIF
Sbjct: 819 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIF 998
Query: 230 RGQPRRHLLQSGWSVFVSAKRLGAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSH 409
RGQPRRHLLQSGWSVFVS+KRL AGDAFIFLRG++GELRVGVRRAMRQQ NVPSSVISSH
Sbjct: 999 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSH 1178
Query: 410 SMHLGVLATAWHAVNTGTMFTVYYKPRTS 496
SMHLGVLATAWHA++TGTMFTVYYKPRTS
Sbjct: 1179 SMHLGVLATAWHAISTGTMFTVYYKPRTS 1265
Score = 177 bits (382), Expect(4) = 8e-072
Identities = 75/105 (71%), Positives = 82/105 (78%)
Frame = -2 / -2
Query: 495 LVLGL**TVNMVPVLTACHAVARTPRCMLWLDITEDGTFACCLMARLTPTRSSPLSPLRK 316
LVLGL**TVN+VPV ACHAVA TPRCMLWLDITEDGTF CC +ARLTPT +SP SPLR
Sbjct: 1264 LVLGL**TVNIVPVEMACHAVASTPRCMLWLDITEDGTFPCCRIARLTPTLNSPFSPLRN 1085
Query: 315 MKASPAPRRLALTKTLQPLCKRCLRG*PLNMWRKRHSTPCRSLAT 181
+ ASPA L LT TL PLC +CLRG*P N+ RHS C+S AT
Sbjct: 1084 INASPATSLLELTNTLHPLCSKCLRG*PRNICLNRHSFACKSFAT 950
Score = 160 bits (344), Expect(3) = e-147
Identities = 61/98 (62%), Positives = 76/98 (77%)
Frame = +3 / +3
Query: 588 GEEAPEQRFTGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPP 767
GEEAPEQRFTGTIVG + D W +SKWR LKVRWDE SSIPRP+RVSPW++EPA++PP
Sbjct: 1356 GEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPP 1535
Query: 768 PINPLPVHRPKRPRSNAVASLPESSAPTKEAAPKVTLE 881
++P+P+ RPKRPRSN S P+SS T+E K ++
Sbjct: 1536 ALSPVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMD 1649
Score = 130 bits (279), Expect(2) = 3e-040
Identities = 65/156 (41%), Positives = 92/156 (58%)
Frame = -1 / -1
Query: 490 PRLVVDSKHGPSVNSMPCCSKNTKMHAVA*YY*RWNICLLPHGTPDSYTKLPTITS*KDE 311
P VVD KH P N MPC + +KMHA+A Y R ++ LL H TP + + + *K +
Sbjct: 1259 PGFVVDCKHSPC*NGMPCGGQYSKMHAMARYNRRRHVSLLSHRTPYTNS*FSILAP*KYK 1080
Query: 310 GISSTKTLGTNKNTPATLQKMPSWLTSEYVAKAPFHTMQVLGYKLLCWRLTGHIQWRKTL 131
I+ G NK+TP TL +MP WLT EY++++P MQ+L LL RL+ HIQ +T
Sbjct: 1079 RIACN*PFGANKHTPPTL*QMPPWLTPEYMSESPLICMQILCN*LLSGRLSRHIQRWETF 900
Query: 130 ICMAPQHRESTMSAGIRGCQCLAEGVHAWPCKCSRR 23
I M+P++R+STM + Q AE +H P + +R
Sbjct: 899 IRMSPKNRKSTMCTCVGCSQGFAERMHLEPRRWRKR 792
Score = 124 bits (266), Expect(3) = 4e-037
Identities = 58/157 (36%), Positives = 91/157 (57%)
Frame = +1 / +2
Query: 25 SCCTCKATRALLLQDIDSL*YQHSWWILGAAAPCR*VSSATGYDPSTSNTRACSQGPAWC 204
S T + A +LQ++D + ++++WWI + A C *+S +GY + S++R +G A
Sbjct: 794 SSSTSEVPGAFVLQNLDCIRHKYTWWIFCS*ATCG*MSPTSGYVSTASHSRVSCKGFACK 973
Query: 205 GMALSPHIQRSTTKASFAEWLECFC*CQASWCWRCLHLSKR**WGASCRSQACHEAASKC 384
+A+ +I STT+A EW+EC C* Q + C RC+++SK W +AC K
Sbjct: 974 *VAIQTYIPGSTTEAFATEWVECVC*LQKASCRRCVYISKGREWRIKSWCKACDATTRKR 1153
Query: 385 SIFSNIKPQHASWCSCYSMACC*HWDHVYCLLQA*DK 495
++F I P HASW + + MAC + D+VY LLQ D+
Sbjct: 1154 AVFCYI*P*HASWSTGHRMACHFNRDYVYSLLQTQDE 1264
Score = 72.1 bits (151), Expect(4) = 8e-072
Identities = 31/47 (65%), Positives = 35/47 (74%)
Frame = -1 / -2
Query: 736 GETLSGRGMEEASSHLTLR*RHLDSAHPA*SGSTFPTMVPVNLCSGA 596
G+TLSGRG+ E SSHLTLR H D H S S+ PT+VPVNLCSGA
Sbjct: 1504 GDTLSGRGILEVSSHLTLRDLHFDFGHLVGSDSSIPTIVPVNLCSGA 1364
Score = 62.0 bits (129), Expect(3) = e-147
Identities = 23/31 (74%), Positives = 28/31 (90%)
Frame = +1 / +3
Query: 496 SPAEFVVPCDRYMESLKRNYPIGMRFKMRFK 588
SP+EF+VP D+YMES+K NY IGMRFKMRF+
Sbjct: 1263 SPSEFIVPFDQYMESVKNNYSIGMRFKMRFE 1355
Score = 57.9 bits (120), Expect(2) = 3e-040
Identities = 28/66 (42%), Positives = 34/66 (51%)
Frame = -3 / -1
Query: 788 HWKRVDRGRADCRFYLPGRNPFRTWNGGSFIPPHLEVTPFRFSPSSLIRIHISNNGPSEP 609
HW R R+ Y P R R+ N S IP HLE +P F P S IR+ N+ S+P
Sbjct: 1556 HWNRTQSRRSKSWLYFPRRYSIRSRNTRSLIPSHLEGSPL*FWPPSRIRLFNPNDCASKP 1377
Query: 608 LFWSLF 591
L SLF
Sbjct: 1376 LLRSLF 1359
Score = 46.0 bits (94), Expect(3) = 4e-037
Identities = 30/68 (44%), Positives = 37/68 (54%)
Frame = +1 / +1
Query: 586 KVKRLQNKGSLGPLLEMWILIKLDGLNLNGVTSR*GGMKLPPFHVLKGFLPGK*NLQSAL 765
K KRL ++G L L + LI L G N +G SR* GM+L F L +L GK*+ L
Sbjct: 1354 KAKRLLSRGLLAQSLGLKSLILLGGQNQSGDPSR*DGMRLLVFLDLIEYLRGK*SQLLLL 1533
Query: 766 PLSTRFQC 789
L FQC
Sbjct: 1534 LL*VLFQC 1557
Score = 43.2 bits (88), Expect(4) = 8e-072
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = -2 / -2
Query: 126 AWRRSTENPP*VLVSEAVNVLQKECT 49
A R TENPP VLVS+AV VLQ ECT
Sbjct: 895 ACRLRTENPPCVLVSDAVKVLQNECT 818
Score = 38.2 bits (77), Expect(4) = 8e-072
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / -1
Query: 585 KPHFKSHPYRVISFQ*FHIAITGNNKLSW 499
K HF+SH RV+ HI I NNKL W
Sbjct: 1352 KSHFESHANRVVILNRLHILIERNNKLRW 1266
Score = 25.4 bits (49), Expect(3) = 4e-037
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +2 / +1
Query: 503 LSLLFPVIAIWNH*NEITL*G*DLK*GLR 589
LSLLF I+IW+ TL *D K* L+
Sbjct: 1270 LSLLFRSISIWSLLRITTLLA*DSK*DLK 1356
>dbj|AK221254.1| Arabidopsis thaliana mRNA for ARF1-binding protein, complete cds,
clone: RAFL24-09-L23
Length = 3317
Score = 343 bits (744), Expect(3) = e-147
Identities = 139/149 (93%), Positives = 145/149 (97%)
Frame = +2 / +3
Query: 50 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIF 229
VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDM+RQPPTQELVAKDLH EWRFRHIF
Sbjct: 819 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIF 998
Query: 230 RGQPRRHLLQSGWSVFVSAKRLGAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSH 409
RGQPRRHLLQSGWSVFVS+KRL AGDAFIFLRG++GELRVGVRRAMRQQ NVPSSVISSH
Sbjct: 999 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSH 1178
Query: 410 SMHLGVLATAWHAVNTGTMFTVYYKPRTS 496
SMHLGVLATAWHA++TGTMFTVYYKPRTS
Sbjct: 1179 SMHLGVLATAWHAISTGTMFTVYYKPRTS 1265
Score = 177 bits (382), Expect(4) = 8e-072
Identities = 75/105 (71%), Positives = 82/105 (78%)
Frame = -2 / -2
Query: 495 LVLGL**TVNMVPVLTACHAVARTPRCMLWLDITEDGTFACCLMARLTPTRSSPLSPLRK 316
LVLGL**TVN+VPV ACHAVA TPRCMLWLDITEDGTF CC +ARLTPT +SP SPLR
Sbjct: 1264 LVLGL**TVNIVPVEMACHAVASTPRCMLWLDITEDGTFPCCRIARLTPTLNSPFSPLRN 1085
Query: 315 MKASPAPRRLALTKTLQPLCKRCLRG*PLNMWRKRHSTPCRSLAT 181
+ ASPA L LT TL PLC +CLRG*P N+ RHS C+S AT
Sbjct: 1084 INASPATSLLELTNTLHPLCSKCLRG*PRNICLNRHSFACKSFAT 950
Score = 160 bits (344), Expect(3) = e-147
Identities = 61/98 (62%), Positives = 76/98 (77%)
Frame = +3 / +3
Query: 588 GEEAPEQRFTGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPP 767
GEEAPEQRFTGTIVG + D W +SKWR LKVRWDE SSIPRP+RVSPW++EPA++PP
Sbjct: 1356 GEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPP 1535
Query: 768 PINPLPVHRPKRPRSNAVASLPESSAPTKEAAPKVTLE 881
++P+P+ RPKRPRSN S P+SS T+E K ++
Sbjct: 1536 ALSPVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMD 1649
Score = 130 bits (279), Expect(2) = 3e-040
Identities = 65/156 (41%), Positives = 92/156 (58%)
Frame = -1 / -1
Query: 490 PRLVVDSKHGPSVNSMPCCSKNTKMHAVA*YY*RWNICLLPHGTPDSYTKLPTITS*KDE 311
P VVD KH P N MPC + +KMHA+A Y R ++ LL H TP + + + *K +
Sbjct: 1259 PGFVVDCKHSPC*NGMPCGGQYSKMHAMARYNRRRHVSLLSHRTPYTNS*FSILAP*KYK 1080
Query: 310 GISSTKTLGTNKNTPATLQKMPSWLTSEYVAKAPFHTMQVLGYKLLCWRLTGHIQWRKTL 131
I+ G NK+TP TL +MP WLT EY++++P MQ+L LL RL+ HIQ +T
Sbjct: 1079 RIACN*PFGANKHTPPTL*QMPPWLTPEYMSESPLICMQILCN*LLSGRLSRHIQRWETF 900
Query: 130 ICMAPQHRESTMSAGIRGCQCLAEGVHAWPCKCSRR 23
I M+P++R+STM + Q AE +H P + +R
Sbjct: 899 IRMSPKNRKSTMCTCVGCSQGFAERMHLEPRRWRKR 792
Score = 124 bits (266), Expect(3) = 4e-037
Identities = 58/157 (36%), Positives = 91/157 (57%)
Frame = +1 / +2
Query: 25 SCCTCKATRALLLQDIDSL*YQHSWWILGAAAPCR*VSSATGYDPSTSNTRACSQGPAWC 204
S T + A +LQ++D + ++++WWI + A C *+S +GY + S++R +G A
Sbjct: 794 SSSTSEVPGAFVLQNLDCIRHKYTWWIFCS*ATCG*MSPTSGYVSTASHSRVSCKGFACK 973
Query: 205 GMALSPHIQRSTTKASFAEWLECFC*CQASWCWRCLHLSKR**WGASCRSQACHEAASKC 384
+A+ +I STT+A EW+EC C* Q + C RC+++SK W +AC K
Sbjct: 974 *VAIQTYIPGSTTEAFATEWVECVC*LQKASCRRCVYISKGREWRIKSWCKACDATTRKR 1153
Query: 385 SIFSNIKPQHASWCSCYSMACC*HWDHVYCLLQA*DK 495
++F I P HASW + + MAC + D+VY LLQ D+
Sbjct: 1154 AVFCYI*P*HASWSTGHRMACHFNRDYVYSLLQTQDE 1264
Score = 72.1 bits (151), Expect(4) = 8e-072
Identities = 31/47 (65%), Positives = 35/47 (74%)
Frame = -1 / -2
Query: 736 GETLSGRGMEEASSHLTLR*RHLDSAHPA*SGSTFPTMVPVNLCSGA 596
G+TLSGRG+ E SSHLTLR H D H S S+ PT+VPVNLCSGA
Sbjct: 1504 GDTLSGRGILEVSSHLTLRDLHFDFGHLVGSDSSIPTIVPVNLCSGA 1364
Score = 62.0 bits (129), Expect(3) = e-147
Identities = 23/31 (74%), Positives = 28/31 (90%)
Frame = +1 / +3
Query: 496 SPAEFVVPCDRYMESLKRNYPIGMRFKMRFK 588
SP+EF+VP D+YMES+K NY IGMRFKMRF+
Sbjct: 1263 SPSEFIVPFDQYMESVKNNYSIGMRFKMRFE 1355
Score = 57.9 bits (120), Expect(2) = 3e-040
Identities = 28/66 (42%), Positives = 34/66 (51%)
Frame = -3 / -1
Query: 788 HWKRVDRGRADCRFYLPGRNPFRTWNGGSFIPPHLEVTPFRFSPSSLIRIHISNNGPSEP 609
HW R R+ Y P R R+ N S IP HLE +P F P S IR+ N+ S+P
Sbjct: 1556 HWNRTQSRRSKSWLYFPRRYSIRSRNTRSLIPSHLEGSPL*FWPPSRIRLFNPNDCASKP 1377
Query: 608 LFWSLF 591
L SLF
Sbjct: 1376 LLRSLF 1359
Score = 46.0 bits (94), Expect(3) = 4e-037
Identities = 30/68 (44%), Positives = 37/68 (54%)
Frame = +1 / +1
Query: 586 KVKRLQNKGSLGPLLEMWILIKLDGLNLNGVTSR*GGMKLPPFHVLKGFLPGK*NLQSAL 765
K KRL ++G L L + LI L G N +G SR* GM+L F L +L GK*+ L
Sbjct: 1354 KAKRLLSRGLLAQSLGLKSLILLGGQNQSGDPSR*DGMRLLVFLDLIEYLRGK*SQLLLL 1533
Query: 766 PLSTRFQC 789
L FQC
Sbjct: 1534 LL*VLFQC 1557
Score = 43.2 bits (88), Expect(4) = 8e-072
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = -2 / -2
Query: 126 AWRRSTENPP*VLVSEAVNVLQKECT 49
A R TENPP VLVS+AV VLQ ECT
Sbjct: 895 ACRLRTENPPCVLVSDAVKVLQNECT 818
Score = 38.2 bits (77), Expect(4) = 8e-072
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / -1
Query: 585 KPHFKSHPYRVISFQ*FHIAITGNNKLSW 499
K HF+SH RV+ HI I NNKL W
Sbjct: 1352 KSHFESHANRVVILNRLHILIERNNKLRW 1266
Score = 25.4 bits (49), Expect(3) = 4e-037
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +2 / +1
Query: 503 LSLLFPVIAIWNH*NEITL*G*DLK*GLR 589
LSLLF I+IW+ TL *D K* L+
Sbjct: 1270 LSLLFRSISIWSLLRITTLLA*DSK*DLK 1356
>dbj|AK221274.1| Arabidopsis thaliana mRNA for ARF1-binding protein, complete cds,
clone: RAFL24-16-M02
Length = 3317
Score = 343 bits (744), Expect(3) = e-147
Identities = 139/149 (93%), Positives = 145/149 (97%)
Frame = +2 / +3
Query: 50 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIF 229
VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDM+RQPPTQELVAKDLH EWRFRHIF
Sbjct: 819 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIF 998
Query: 230 RGQPRRHLLQSGWSVFVSAKRLGAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSH 409
RGQPRRHLLQSGWSVFVS+KRL AGDAFIFLRG++GELRVGVRRAMRQQ NVPSSVISSH
Sbjct: 999 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSH 1178
Query: 410 SMHLGVLATAWHAVNTGTMFTVYYKPRTS 496
SMHLGVLATAWHA++TGTMFTVYYKPRTS
Sbjct: 1179 SMHLGVLATAWHAISTGTMFTVYYKPRTS 1265
Score = 177 bits (382), Expect(4) = 8e-072
Identities = 75/105 (71%), Positives = 82/105 (78%)
Frame = -2 / -2
Query: 495 LVLGL**TVNMVPVLTACHAVARTPRCMLWLDITEDGTFACCLMARLTPTRSSPLSPLRK 316
LVLGL**TVN+VPV ACHAVA TPRCMLWLDITEDGTF CC +ARLTPT +SP SPLR
Sbjct: 1264 LVLGL**TVNIVPVEMACHAVASTPRCMLWLDITEDGTFPCCRIARLTPTLNSPFSPLRN 1085
Query: 315 MKASPAPRRLALTKTLQPLCKRCLRG*PLNMWRKRHSTPCRSLAT 181
+ ASPA L LT TL PLC +CLRG*P N+ RHS C+S AT
Sbjct: 1084 INASPATSLLELTNTLHPLCSKCLRG*PRNICLNRHSFACKSFAT 950
Score = 160 bits (344), Expect(3) = e-147
Identities = 61/98 (62%), Positives = 76/98 (77%)
Frame = +3 / +3
Query: 588 GEEAPEQRFTGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPP 767
GEEAPEQRFTGTIVG + D W +SKWR LKVRWDE SSIPRP+RVSPW++EPA++PP
Sbjct: 1356 GEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPP 1535
Query: 768 PINPLPVHRPKRPRSNAVASLPESSAPTKEAAPKVTLE 881
++P+P+ RPKRPRSN S P+SS T+E K ++
Sbjct: 1536 ALSPVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMD 1649
Score = 130 bits (279), Expect(2) = 3e-040
Identities = 65/156 (41%), Positives = 92/156 (58%)
Frame = -1 / -1
Query: 490 PRLVVDSKHGPSVNSMPCCSKNTKMHAVA*YY*RWNICLLPHGTPDSYTKLPTITS*KDE 311
P VVD KH P N MPC + +KMHA+A Y R ++ LL H TP + + + *K +
Sbjct: 1259 PGFVVDCKHSPC*NGMPCGGQYSKMHAMARYNRRRHVSLLSHRTPYTNS*FSILAP*KYK 1080
Query: 310 GISSTKTLGTNKNTPATLQKMPSWLTSEYVAKAPFHTMQVLGYKLLCWRLTGHIQWRKTL 131
I+ G NK+TP TL +MP WLT EY++++P MQ+L LL RL+ HIQ +T
Sbjct: 1079 RIACN*PFGANKHTPPTL*QMPPWLTPEYMSESPLICMQILCN*LLSGRLSRHIQRWETF 900
Query: 130 ICMAPQHRESTMSAGIRGCQCLAEGVHAWPCKCSRR 23
I M+P++R+STM + Q AE +H P + +R
Sbjct: 899 IRMSPKNRKSTMCTCVGCSQGFAERMHLEPRRWRKR 792
Score = 124 bits (266), Expect(3) = 4e-037
Identities = 58/157 (36%), Positives = 91/157 (57%)
Frame = +1 / +2
Query: 25 SCCTCKATRALLLQDIDSL*YQHSWWILGAAAPCR*VSSATGYDPSTSNTRACSQGPAWC 204
S T + A +LQ++D + ++++WWI + A C *+S +GY + S++R +G A
Sbjct: 794 SSSTSEVPGAFVLQNLDCIRHKYTWWIFCS*ATCG*MSPTSGYVSTASHSRVSCKGFACK 973
Query: 205 GMALSPHIQRSTTKASFAEWLECFC*CQASWCWRCLHLSKR**WGASCRSQACHEAASKC 384
+A+ +I STT+A EW+EC C* Q + C RC+++SK W +AC K
Sbjct: 974 *VAIQTYIPGSTTEAFATEWVECVC*LQKASCRRCVYISKGREWRIKSWCKACDATTRKR 1153
Query: 385 SIFSNIKPQHASWCSCYSMACC*HWDHVYCLLQA*DK 495
++F I P HASW + + MAC + D+VY LLQ D+
Sbjct: 1154 AVFCYI*P*HASWSTGHRMACHFNRDYVYSLLQTQDE 1264
Score = 72.1 bits (151), Expect(4) = 8e-072
Identities = 31/47 (65%), Positives = 35/47 (74%)
Frame = -1 / -2
Query: 736 GETLSGRGMEEASSHLTLR*RHLDSAHPA*SGSTFPTMVPVNLCSGA 596
G+TLSGRG+ E SSHLTLR H D H S S+ PT+VPVNLCSGA
Sbjct: 1504 GDTLSGRGILEVSSHLTLRDLHFDFGHLVGSDSSIPTIVPVNLCSGA 1364
Score = 62.0 bits (129), Expect(3) = e-147
Identities = 23/31 (74%), Positives = 28/31 (90%)
Frame = +1 / +3
Query: 496 SPAEFVVPCDRYMESLKRNYPIGMRFKMRFK 588
SP+EF+VP D+YMES+K NY IGMRFKMRF+
Sbjct: 1263 SPSEFIVPFDQYMESVKNNYSIGMRFKMRFE 1355
Score = 57.9 bits (120), Expect(2) = 3e-040
Identities = 28/66 (42%), Positives = 34/66 (51%)
Frame = -3 / -1
Query: 788 HWKRVDRGRADCRFYLPGRNPFRTWNGGSFIPPHLEVTPFRFSPSSLIRIHISNNGPSEP 609
HW R R+ Y P R R+ N S IP HLE +P F P S IR+ N+ S+P
Sbjct: 1556 HWNRTQSRRSKSWLYFPRRYSIRSRNTRSLIPSHLEGSPL*FWPPSRIRLFNPNDCASKP 1377
Query: 608 LFWSLF 591
L SLF
Sbjct: 1376 LLRSLF 1359
Score = 46.0 bits (94), Expect(3) = 4e-037
Identities = 30/68 (44%), Positives = 37/68 (54%)
Frame = +1 / +1
Query: 586 KVKRLQNKGSLGPLLEMWILIKLDGLNLNGVTSR*GGMKLPPFHVLKGFLPGK*NLQSAL 765
K KRL ++G L L + LI L G N +G SR* GM+L F L +L GK*+ L
Sbjct: 1354 KAKRLLSRGLLAQSLGLKSLILLGGQNQSGDPSR*DGMRLLVFLDLIEYLRGK*SQLLLL 1533
Query: 766 PLSTRFQC 789
L FQC
Sbjct: 1534 LL*VLFQC 1557
Score = 43.2 bits (88), Expect(4) = 8e-072
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = -2 / -2
Query: 126 AWRRSTENPP*VLVSEAVNVLQKECT 49
A R TENPP VLVS+AV VLQ ECT
Sbjct: 895 ACRLRTENPPCVLVSDAVKVLQNECT 818
Score = 38.2 bits (77), Expect(4) = 8e-072
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / -1
Query: 585 KPHFKSHPYRVISFQ*FHIAITGNNKLSW 499
K HF+SH RV+ HI I NNKL W
Sbjct: 1352 KSHFESHANRVVILNRLHILIERNNKLRW 1266
Score = 25.4 bits (49), Expect(3) = 4e-037
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +2 / +1
Query: 503 LSLLFPVIAIWNH*NEITL*G*DLK*GLR 589
LSLLF I+IW+ TL *D K* L+
Sbjct: 1270 LSLLFRSISIWSLLRITTLLA*DSK*DLK 1356
>dbj|AK221277.1| Arabidopsis thaliana mRNA for ARF1-binding protein, complete cds,
clone: RAFL24-18-M11
Length = 3316
Score = 343 bits (744), Expect(3) = e-147
Identities = 139/149 (93%), Positives = 145/149 (97%)
Frame = +2 / +3
Query: 50 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIF 229
VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDM+RQPPTQELVAKDLH EWRFRHIF
Sbjct: 771 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIF 950
Query: 230 RGQPRRHLLQSGWSVFVSAKRLGAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSH 409
RGQPRRHLLQSGWSVFVS+KRL AGDAFIFLRG++GELRVGVRRAMRQQ NVPSSVISSH
Sbjct: 951 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSH 1130
Query: 410 SMHLGVLATAWHAVNTGTMFTVYYKPRTS 496
SMHLGVLATAWHA++TGTMFTVYYKPRTS
Sbjct: 1131 SMHLGVLATAWHAISTGTMFTVYYKPRTS 1217
Score = 177 bits (382), Expect(4) = 8e-072
Identities = 75/105 (71%), Positives = 82/105 (78%)
Frame = -2 / -1
Query: 495 LVLGL**TVNMVPVLTACHAVARTPRCMLWLDITEDGTFACCLMARLTPTRSSPLSPLRK 316
LVLGL**TVN+VPV ACHAVA TPRCMLWLDITEDGTF CC +ARLTPT +SP SPLR
Sbjct: 1216 LVLGL**TVNIVPVEMACHAVASTPRCMLWLDITEDGTFPCCRIARLTPTLNSPFSPLRN 1037
Query: 315 MKASPAPRRLALTKTLQPLCKRCLRG*PLNMWRKRHSTPCRSLAT 181
+ ASPA L LT TL PLC +CLRG*P N+ RHS C+S AT
Sbjct: 1036 INASPATSLLELTNTLHPLCSKCLRG*PRNICLNRHSFACKSFAT 902
Score = 160 bits (344), Expect(3) = e-147
Identities = 61/98 (62%), Positives = 76/98 (77%)
Frame = +3 / +3
Query: 588 GEEAPEQRFTGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPP 767
GEEAPEQRFTGTIVG + D W +SKWR LKVRWDE SSIPRP+RVSPW++EPA++PP
Sbjct: 1308 GEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPP 1487
Query: 768 PINPLPVHRPKRPRSNAVASLPESSAPTKEAAPKVTLE 881
++P+P+ RPKRPRSN S P+SS T+E K ++
Sbjct: 1488 ALSPVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMD 1601
Score = 130 bits (279), Expect(2) = 3e-040
Identities = 65/156 (41%), Positives = 92/156 (58%)
Frame = -1 / -3
Query: 490 PRLVVDSKHGPSVNSMPCCSKNTKMHAVA*YY*RWNICLLPHGTPDSYTKLPTITS*KDE 311
P VVD KH P N MPC + +KMHA+A Y R ++ LL H TP + + + *K +
Sbjct: 1211 PGFVVDCKHSPC*NGMPCGGQYSKMHAMARYNRRRHVSLLSHRTPYTNS*FSILAP*KYK 1032
Query: 310 GISSTKTLGTNKNTPATLQKMPSWLTSEYVAKAPFHTMQVLGYKLLCWRLTGHIQWRKTL 131
I+ G NK+TP TL +MP WLT EY++++P MQ+L LL RL+ HIQ +T
Sbjct: 1031 RIACN*PFGANKHTPPTL*QMPPWLTPEYMSESPLICMQILCN*LLSGRLSRHIQRWETF 852
Query: 130 ICMAPQHRESTMSAGIRGCQCLAEGVHAWPCKCSRR 23
I M+P++R+STM + Q AE +H P + +R
Sbjct: 851 IRMSPKNRKSTMCTCVGCSQGFAERMHLEPRRWRKR 744
Score = 124 bits (266), Expect(3) = 4e-037
Identities = 58/157 (36%), Positives = 91/157 (57%)
Frame = +1 / +2
Query: 25 SCCTCKATRALLLQDIDSL*YQHSWWILGAAAPCR*VSSATGYDPSTSNTRACSQGPAWC 204
S T + A +LQ++D + ++++WWI + A C *+S +GY + S++R +G A
Sbjct: 746 SSSTSEVPGAFVLQNLDCIRHKYTWWIFCS*ATCG*MSPTSGYVSTASHSRVSCKGFACK 925
Query: 205 GMALSPHIQRSTTKASFAEWLECFC*CQASWCWRCLHLSKR**WGASCRSQACHEAASKC 384
+A+ +I STT+A EW+EC C* Q + C RC+++SK W +AC K
Sbjct: 926 *VAIQTYIPGSTTEAFATEWVECVC*LQKASCRRCVYISKGREWRIKSWCKACDATTRKR 1105
Query: 385 SIFSNIKPQHASWCSCYSMACC*HWDHVYCLLQA*DK 495
++F I P HASW + + MAC + D+VY LLQ D+
Sbjct: 1106 AVFCYI*P*HASWSTGHRMACHFNRDYVYSLLQTQDE 1216
Score = 72.1 bits (151), Expect(4) = 8e-072
Identities = 31/47 (65%), Positives = 35/47 (74%)
Frame = -1 / -1
Query: 736 GETLSGRGMEEASSHLTLR*RHLDSAHPA*SGSTFPTMVPVNLCSGA 596
G+TLSGRG+ E SSHLTLR H D H S S+ PT+VPVNLCSGA
Sbjct: 1456 GDTLSGRGILEVSSHLTLRDLHFDFGHLVGSDSSIPTIVPVNLCSGA 1316
Score = 62.0 bits (129), Expect(3) = e-147
Identities = 23/31 (74%), Positives = 28/31 (90%)
Frame = +1 / +3
Query: 496 SPAEFVVPCDRYMESLKRNYPIGMRFKMRFK 588
SP+EF+VP D+YMES+K NY IGMRFKMRF+
Sbjct: 1215 SPSEFIVPFDQYMESVKNNYSIGMRFKMRFE 1307
Score = 57.9 bits (120), Expect(2) = 3e-040
Identities = 28/66 (42%), Positives = 34/66 (51%)
Frame = -3 / -3
Query: 788 HWKRVDRGRADCRFYLPGRNPFRTWNGGSFIPPHLEVTPFRFSPSSLIRIHISNNGPSEP 609
HW R R+ Y P R R+ N S IP HLE +P F P S IR+ N+ S+P
Sbjct: 1508 HWNRTQSRRSKSWLYFPRRYSIRSRNTRSLIPSHLEGSPL*FWPPSRIRLFNPNDCASKP 1329
Query: 608 LFWSLF 591
L SLF
Sbjct: 1328 LLRSLF 1311
Score = 46.0 bits (94), Expect(3) = 4e-037
Identities = 30/68 (44%), Positives = 37/68 (54%)
Frame = +1 / +1
Query: 586 KVKRLQNKGSLGPLLEMWILIKLDGLNLNGVTSR*GGMKLPPFHVLKGFLPGK*NLQSAL 765
K KRL ++G L L + LI L G N +G SR* GM+L F L +L GK*+ L
Sbjct: 1306 KAKRLLSRGLLAQSLGLKSLILLGGQNQSGDPSR*DGMRLLVFLDLIEYLRGK*SQLLLL 1485
Query: 766 PLSTRFQC 789
L FQC
Sbjct: 1486 LL*VLFQC 1509
Score = 43.2 bits (88), Expect(4) = 8e-072
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = -2 / -1
Query: 126 AWRRSTENPP*VLVSEAVNVLQKECT 49
A R TENPP VLVS+AV VLQ ECT
Sbjct: 847 ACRLRTENPPCVLVSDAVKVLQNECT 770
Score = 38.2 bits (77), Expect(4) = 8e-072
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / -3
Query: 585 KPHFKSHPYRVISFQ*FHIAITGNNKLSW 499
K HF+SH RV+ HI I NNKL W
Sbjct: 1304 KSHFESHANRVVILNRLHILIERNNKLRW 1218
Score = 25.4 bits (49), Expect(3) = 4e-037
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +2 / +1
Query: 503 LSLLFPVIAIWNH*NEITL*G*DLK*GLR 589
LSLLF I+IW+ TL *D K* L+
Sbjct: 1222 LSLLFRSISIWSLLRITTLLA*DSK*DLK 1308
>dbj|AK221282.1| Arabidopsis thaliana mRNA for ARF1-binding protein, complete cds,
clone: RAFL24-19-K22
Length = 3275
Score = 343 bits (744), Expect(3) = e-147
Identities = 139/149 (93%), Positives = 145/149 (97%)
Frame = +2 / +1
Query: 50 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIF 229
VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDM+RQPPTQELVAKDLH EWRFRHIF
Sbjct: 769 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIF 948
Query: 230 RGQPRRHLLQSGWSVFVSAKRLGAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSH 409
RGQPRRHLLQSGWSVFVS+KRL AGDAFIFLRG++GELRVGVRRAMRQQ NVPSSVISSH
Sbjct: 949 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSH 1128
Query: 410 SMHLGVLATAWHAVNTGTMFTVYYKPRTS 496
SMHLGVLATAWHA++TGTMFTVYYKPRTS
Sbjct: 1129 SMHLGVLATAWHAISTGTMFTVYYKPRTS 1215
Score = 177 bits (382), Expect(4) = 8e-072
Identities = 75/105 (71%), Positives = 82/105 (78%)
Frame = -2 / -1
Query: 495 LVLGL**TVNMVPVLTACHAVARTPRCMLWLDITEDGTFACCLMARLTPTRSSPLSPLRK 316
LVLGL**TVN+VPV ACHAVA TPRCMLWLDITEDGTF CC +ARLTPT +SP SPLR
Sbjct: 1214 LVLGL**TVNIVPVEMACHAVASTPRCMLWLDITEDGTFPCCRIARLTPTLNSPFSPLRN 1035
Query: 315 MKASPAPRRLALTKTLQPLCKRCLRG*PLNMWRKRHSTPCRSLAT 181
+ ASPA L LT TL PLC +CLRG*P N+ RHS C+S AT
Sbjct: 1034 INASPATSLLELTNTLHPLCSKCLRG*PRNICLNRHSFACKSFAT 900
Score = 160 bits (344), Expect(3) = e-147
Identities = 61/98 (62%), Positives = 76/98 (77%)
Frame = +3 / +1
Query: 588 GEEAPEQRFTGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPP 767
GEEAPEQRFTGTIVG + D W +SKWR LKVRWDE SSIPRP+RVSPW++EPA++PP
Sbjct: 1306 GEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPP 1485
Query: 768 PINPLPVHRPKRPRSNAVASLPESSAPTKEAAPKVTLE 881
++P+P+ RPKRPRSN S P+SS T+E K ++
Sbjct: 1486 ALSPVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMD 1599
Score = 130 bits (279), Expect(2) = 3e-040
Identities = 65/156 (41%), Positives = 92/156 (58%)
Frame = -1 / -3
Query: 490 PRLVVDSKHGPSVNSMPCCSKNTKMHAVA*YY*RWNICLLPHGTPDSYTKLPTITS*KDE 311
P VVD KH P N MPC + +KMHA+A Y R ++ LL H TP + + + *K +
Sbjct: 1209 PGFVVDCKHSPC*NGMPCGGQYSKMHAMARYNRRRHVSLLSHRTPYTNS*FSILAP*KYK 1030
Query: 310 GISSTKTLGTNKNTPATLQKMPSWLTSEYVAKAPFHTMQVLGYKLLCWRLTGHIQWRKTL 131
I+ G NK+TP TL +MP WLT EY++++P MQ+L LL RL+ HIQ +T
Sbjct: 1029 RIACN*PFGANKHTPPTL*QMPPWLTPEYMSESPLICMQILCN*LLSGRLSRHIQRWETF 850
Query: 130 ICMAPQHRESTMSAGIRGCQCLAEGVHAWPCKCSRR 23
I M+P++R+STM + Q AE +H P + +R
Sbjct: 849 IRMSPKNRKSTMCTCVGCSQGFAERMHLEPRRWRKR 742
Score = 124 bits (266), Expect(3) = 4e-037
Identities = 58/157 (36%), Positives = 91/157 (57%)
Frame = +1 / +3
Query: 25 SCCTCKATRALLLQDIDSL*YQHSWWILGAAAPCR*VSSATGYDPSTSNTRACSQGPAWC 204
S T + A +LQ++D + ++++WWI + A C *+S +GY + S++R +G A
Sbjct: 744 SSSTSEVPGAFVLQNLDCIRHKYTWWIFCS*ATCG*MSPTSGYVSTASHSRVSCKGFACK 923
Query: 205 GMALSPHIQRSTTKASFAEWLECFC*CQASWCWRCLHLSKR**WGASCRSQACHEAASKC 384
+A+ +I STT+A EW+EC C* Q + C RC+++SK W +AC K
Sbjct: 924 *VAIQTYIPGSTTEAFATEWVECVC*LQKASCRRCVYISKGREWRIKSWCKACDATTRKR 1103
Query: 385 SIFSNIKPQHASWCSCYSMACC*HWDHVYCLLQA*DK 495
++F I P HASW + + MAC + D+VY LLQ D+
Sbjct: 1104 AVFCYI*P*HASWSTGHRMACHFNRDYVYSLLQTQDE 1214
Score = 72.1 bits (151), Expect(4) = 8e-072
Identities = 31/47 (65%), Positives = 35/47 (74%)
Frame = -1 / -1
Query: 736 GETLSGRGMEEASSHLTLR*RHLDSAHPA*SGSTFPTMVPVNLCSGA 596
G+TLSGRG+ E SSHLTLR H D H S S+ PT+VPVNLCSGA
Sbjct: 1454 GDTLSGRGILEVSSHLTLRDLHFDFGHLVGSDSSIPTIVPVNLCSGA 1314
Score = 62.0 bits (129), Expect(3) = e-147
Identities = 23/31 (74%), Positives = 28/31 (90%)
Frame = +1 / +1
Query: 496 SPAEFVVPCDRYMESLKRNYPIGMRFKMRFK 588
SP+EF+VP D+YMES+K NY IGMRFKMRF+
Sbjct: 1213 SPSEFIVPFDQYMESVKNNYSIGMRFKMRFE 1305
Score = 57.9 bits (120), Expect(2) = 3e-040
Identities = 28/66 (42%), Positives = 34/66 (51%)
Frame = -3 / -3
Query: 788 HWKRVDRGRADCRFYLPGRNPFRTWNGGSFIPPHLEVTPFRFSPSSLIRIHISNNGPSEP 609
HW R R+ Y P R R+ N S IP HLE +P F P S IR+ N+ S+P
Sbjct: 1506 HWNRTQSRRSKSWLYFPRRYSIRSRNTRSLIPSHLEGSPL*FWPPSRIRLFNPNDCASKP 1327
Query: 608 LFWSLF 591
L SLF
Sbjct: 1326 LLRSLF 1309
Score = 46.0 bits (94), Expect(3) = 4e-037
Identities = 30/68 (44%), Positives = 37/68 (54%)
Frame = +1 / +2
Query: 586 KVKRLQNKGSLGPLLEMWILIKLDGLNLNGVTSR*GGMKLPPFHVLKGFLPGK*NLQSAL 765
K KRL ++G L L + LI L G N +G SR* GM+L F L +L GK*+ L
Sbjct: 1304 KAKRLLSRGLLAQSLGLKSLILLGGQNQSGDPSR*DGMRLLVFLDLIEYLRGK*SQLLLL 1483
Query: 766 PLSTRFQC 789
L FQC
Sbjct: 1484 LL*VLFQC 1507
Score = 43.2 bits (88), Expect(4) = 8e-072
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = -2 / -1
Query: 126 AWRRSTENPP*VLVSEAVNVLQKECT 49
A R TENPP VLVS+AV VLQ ECT
Sbjct: 845 ACRLRTENPPCVLVSDAVKVLQNECT 768
Score = 38.2 bits (77), Expect(4) = 8e-072
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / -3
Query: 585 KPHFKSHPYRVISFQ*FHIAITGNNKLSW 499
K HF+SH RV+ HI I NNKL W
Sbjct: 1302 KSHFESHANRVVILNRLHILIERNNKLRW 1216
Score = 25.4 bits (49), Expect(3) = 4e-037
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +2 / +2
Query: 503 LSLLFPVIAIWNH*NEITL*G*DLK*GLR 589
LSLLF I+IW+ TL *D K* L+
Sbjct: 1220 LSLLFRSISIWSLLRITTLLA*DSK*DLK 1306
>gb|AF378862.1|AF378862 Arabidopsis thaliana AT5g62000/mtg10_20 mRNA, complete cds
Length = 3171
Score = 343 bits (744), Expect(3) = e-147
Identities = 139/149 (93%), Positives = 145/149 (97%)
Frame = +2 / +2
Query: 50 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIF 229
VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDM+RQPPTQELVAKDLH EWRFRHIF
Sbjct: 821 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIF 1000
Query: 230 RGQPRRHLLQSGWSVFVSAKRLGAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSH 409
RGQPRRHLLQSGWSVFVS+KRL AGDAFIFLRG++GELRVGVRRAMRQQ NVPSSVISSH
Sbjct: 1001 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSH 1180
Query: 410 SMHLGVLATAWHAVNTGTMFTVYYKPRTS 496
SMHLGVLATAWHA++TGTMFTVYYKPRTS
Sbjct: 1181 SMHLGVLATAWHAISTGTMFTVYYKPRTS 1267
Score = 177 bits (382), Expect(4) = 8e-072
Identities = 75/105 (71%), Positives = 82/105 (78%)
Frame = -2 / -1
Query: 495 LVLGL**TVNMVPVLTACHAVARTPRCMLWLDITEDGTFACCLMARLTPTRSSPLSPLRK 316
LVLGL**TVN+VPV ACHAVA TPRCMLWLDITEDGTF CC +ARLTPT +SP SPLR
Sbjct: 1266 LVLGL**TVNIVPVEMACHAVASTPRCMLWLDITEDGTFPCCRIARLTPTLNSPFSPLRN 1087
Query: 315 MKASPAPRRLALTKTLQPLCKRCLRG*PLNMWRKRHSTPCRSLAT 181
+ ASPA L LT TL PLC +CLRG*P N+ RHS C+S AT
Sbjct: 1086 INASPATSLLELTNTLHPLCSKCLRG*PRNICLNRHSFACKSFAT 952
Score = 160 bits (344), Expect(3) = e-147
Identities = 61/98 (62%), Positives = 76/98 (77%)
Frame = +3 / +2
Query: 588 GEEAPEQRFTGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPP 767
GEEAPEQRFTGTIVG + D W +SKWR LKVRWDE SSIPRP+RVSPW++EPA++PP
Sbjct: 1358 GEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPP 1537
Query: 768 PINPLPVHRPKRPRSNAVASLPESSAPTKEAAPKVTLE 881
++P+P+ RPKRPRSN S P+SS T+E K ++
Sbjct: 1538 ALSPVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMD 1651
Score = 130 bits (279), Expect(2) = 3e-040
Identities = 65/156 (41%), Positives = 92/156 (58%)
Frame = -1 / -3
Query: 490 PRLVVDSKHGPSVNSMPCCSKNTKMHAVA*YY*RWNICLLPHGTPDSYTKLPTITS*KDE 311
P VVD KH P N MPC + +KMHA+A Y R ++ LL H TP + + + *K +
Sbjct: 1261 PGFVVDCKHSPC*NGMPCGGQYSKMHAMARYNRRRHVSLLSHRTPYTNS*FSILAP*KYK 1082
Query: 310 GISSTKTLGTNKNTPATLQKMPSWLTSEYVAKAPFHTMQVLGYKLLCWRLTGHIQWRKTL 131
I+ G NK+TP TL +MP WLT EY++++P MQ+L LL RL+ HIQ +T
Sbjct: 1081 RIACN*PFGANKHTPPTL*QMPPWLTPEYMSESPLICMQILCN*LLSGRLSRHIQRWETF 902
Query: 130 ICMAPQHRESTMSAGIRGCQCLAEGVHAWPCKCSRR 23
I M+P++R+STM + Q AE +H P + +R
Sbjct: 901 IRMSPKNRKSTMCTCVGCSQGFAERMHLEPRRWRKR 794
Score = 124 bits (266), Expect(3) = 4e-037
Identities = 58/157 (36%), Positives = 91/157 (57%)
Frame = +1 / +1
Query: 25 SCCTCKATRALLLQDIDSL*YQHSWWILGAAAPCR*VSSATGYDPSTSNTRACSQGPAWC 204
S T + A +LQ++D + ++++WWI + A C *+S +GY + S++R +G A
Sbjct: 796 SSSTSEVPGAFVLQNLDCIRHKYTWWIFCS*ATCG*MSPTSGYVSTASHSRVSCKGFACK 975
Query: 205 GMALSPHIQRSTTKASFAEWLECFC*CQASWCWRCLHLSKR**WGASCRSQACHEAASKC 384
+A+ +I STT+A EW+EC C* Q + C RC+++SK W +AC K
Sbjct: 976 *VAIQTYIPGSTTEAFATEWVECVC*LQKASCRRCVYISKGREWRIKSWCKACDATTRKR 1155
Query: 385 SIFSNIKPQHASWCSCYSMACC*HWDHVYCLLQA*DK 495
++F I P HASW + + MAC + D+VY LLQ D+
Sbjct: 1156 AVFCYI*P*HASWSTGHRMACHFNRDYVYSLLQTQDE 1266
Score = 72.1 bits (151), Expect(4) = 8e-072
Identities = 31/47 (65%), Positives = 35/47 (74%)
Frame = -1 / -1
Query: 736 GETLSGRGMEEASSHLTLR*RHLDSAHPA*SGSTFPTMVPVNLCSGA 596
G+TLSGRG+ E SSHLTLR H D H S S+ PT+VPVNLCSGA
Sbjct: 1506 GDTLSGRGILEVSSHLTLRDLHFDFGHLVGSDSSIPTIVPVNLCSGA 1366
Score = 62.0 bits (129), Expect(3) = e-147
Identities = 23/31 (74%), Positives = 28/31 (90%)
Frame = +1 / +2
Query: 496 SPAEFVVPCDRYMESLKRNYPIGMRFKMRFK 588
SP+EF+VP D+YMES+K NY IGMRFKMRF+
Sbjct: 1265 SPSEFIVPFDQYMESVKNNYSIGMRFKMRFE 1357
Score = 57.9 bits (120), Expect(2) = 3e-040
Identities = 28/66 (42%), Positives = 34/66 (51%)
Frame = -3 / -3
Query: 788 HWKRVDRGRADCRFYLPGRNPFRTWNGGSFIPPHLEVTPFRFSPSSLIRIHISNNGPSEP 609
HW R R+ Y P R R+ N S IP HLE +P F P S IR+ N+ S+P
Sbjct: 1558 HWNRTQSRRSKSWLYFPRRYSIRSRNTRSLIPSHLEGSPL*FWPPSRIRLFNPNDCASKP 1379
Query: 608 LFWSLF 591
L SLF
Sbjct: 1378 LLRSLF 1361
Score = 46.0 bits (94), Expect(3) = 4e-037
Identities = 30/68 (44%), Positives = 37/68 (54%)
Frame = +1 / +3
Query: 586 KVKRLQNKGSLGPLLEMWILIKLDGLNLNGVTSR*GGMKLPPFHVLKGFLPGK*NLQSAL 765
K KRL ++G L L + LI L G N +G SR* GM+L F L +L GK*+ L
Sbjct: 1356 KAKRLLSRGLLAQSLGLKSLILLGGQNQSGDPSR*DGMRLLVFLDLIEYLRGK*SQLLLL 1535
Query: 766 PLSTRFQC 789
L FQC
Sbjct: 1536 LL*VLFQC 1559
Score = 43.2 bits (88), Expect(4) = 8e-072
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = -2 / -1
Query: 126 AWRRSTENPP*VLVSEAVNVLQKECT 49
A R TENPP VLVS+AV VLQ ECT
Sbjct: 897 ACRLRTENPPCVLVSDAVKVLQNECT 820
Score = 38.2 bits (77), Expect(4) = 8e-072
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / -3
Query: 585 KPHFKSHPYRVISFQ*FHIAITGNNKLSW 499
K HF+SH RV+ HI I NNKL W
Sbjct: 1354 KSHFESHANRVVILNRLHILIERNNKLRW 1268
Score = 25.4 bits (49), Expect(3) = 4e-037
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +2 / +3
Query: 503 LSLLFPVIAIWNH*NEITL*G*DLK*GLR 589
LSLLF I+IW+ TL *D K* L+
Sbjct: 1272 LSLLFRSISIWSLLRITTLLA*DSK*DLK 1358
>gb|AY669787.1| Arabidopsis thaliana clone C105342 ARF2 (At5g62000) mRNA, complete
cds
Length = 2772
Score = 343 bits (744), Expect(3) = e-147
Identities = 139/149 (93%), Positives = 145/149 (97%)
Frame = +2 / +1
Query: 50 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIF 229
VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDM+RQPPTQELVAKDLH EWRFRHIF
Sbjct: 481 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIF 660
Query: 230 RGQPRRHLLQSGWSVFVSAKRLGAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSH 409
RGQPRRHLLQSGWSVFVS+KRL AGDAFIFLRG++GELRVGVRRAMRQQ NVPSSVISSH
Sbjct: 661 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSH 840
Query: 410 SMHLGVLATAWHAVNTGTMFTVYYKPRTS 496
SMHLGVLATAWHA++TGTMFTVYYKPRTS
Sbjct: 841 SMHLGVLATAWHAISTGTMFTVYYKPRTS 927
Score = 177 bits (382), Expect(4) = 8e-072
Identities = 75/105 (71%), Positives = 82/105 (78%)
Frame = -2 / -2
Query: 495 LVLGL**TVNMVPVLTACHAVARTPRCMLWLDITEDGTFACCLMARLTPTRSSPLSPLRK 316
LVLGL**TVN+VPV ACHAVA TPRCMLWLDITEDGTF CC +ARLTPT +SP SPLR
Sbjct: 926 LVLGL**TVNIVPVEMACHAVASTPRCMLWLDITEDGTFPCCRIARLTPTLNSPFSPLRN 747
Query: 315 MKASPAPRRLALTKTLQPLCKRCLRG*PLNMWRKRHSTPCRSLAT 181
+ ASPA L LT TL PLC +CLRG*P N+ RHS C+S AT
Sbjct: 746 INASPATSLLELTNTLHPLCSKCLRG*PRNICLNRHSFACKSFAT 612
Score = 160 bits (344), Expect(3) = e-147
Identities = 61/98 (62%), Positives = 76/98 (77%)
Frame = +3 / +1
Query: 588 GEEAPEQRFTGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPP 767
GEEAPEQRFTGTIVG + D W +SKWR LKVRWDE SSIPRP+RVSPW++EPA++PP
Sbjct: 1018 GEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPP 1197
Query: 768 PINPLPVHRPKRPRSNAVASLPESSAPTKEAAPKVTLE 881
++P+P+ RPKRPRSN S P+SS T+E K ++
Sbjct: 1198 ALSPVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMD 1311
Score = 130 bits (279), Expect(2) = 3e-040
Identities = 65/156 (41%), Positives = 92/156 (58%)
Frame = -1 / -1
Query: 490 PRLVVDSKHGPSVNSMPCCSKNTKMHAVA*YY*RWNICLLPHGTPDSYTKLPTITS*KDE 311
P VVD KH P N MPC + +KMHA+A Y R ++ LL H TP + + + *K +
Sbjct: 921 PGFVVDCKHSPC*NGMPCGGQYSKMHAMARYNRRRHVSLLSHRTPYTNS*FSILAP*KYK 742
Query: 310 GISSTKTLGTNKNTPATLQKMPSWLTSEYVAKAPFHTMQVLGYKLLCWRLTGHIQWRKTL 131
I+ G NK+TP TL +MP WLT EY++++P MQ+L LL RL+ HIQ +T
Sbjct: 741 RIACN*PFGANKHTPPTL*QMPPWLTPEYMSESPLICMQILCN*LLSGRLSRHIQRWETF 562
Query: 130 ICMAPQHRESTMSAGIRGCQCLAEGVHAWPCKCSRR 23
I M+P++R+STM + Q AE +H P + +R
Sbjct: 561 IRMSPKNRKSTMCTCVGCSQGFAERMHLEPRRWRKR 454
Score = 124 bits (266), Expect(3) = 4e-037
Identities = 58/157 (36%), Positives = 91/157 (57%)
Frame = +1 / +3
Query: 25 SCCTCKATRALLLQDIDSL*YQHSWWILGAAAPCR*VSSATGYDPSTSNTRACSQGPAWC 204
S T + A +LQ++D + ++++WWI + A C *+S +GY + S++R +G A
Sbjct: 456 SSSTSEVPGAFVLQNLDCIRHKYTWWIFCS*ATCG*MSPTSGYVSTASHSRVSCKGFACK 635
Query: 205 GMALSPHIQRSTTKASFAEWLECFC*CQASWCWRCLHLSKR**WGASCRSQACHEAASKC 384
+A+ +I STT+A EW+EC C* Q + C RC+++SK W +AC K
Sbjct: 636 *VAIQTYIPGSTTEAFATEWVECVC*LQKASCRRCVYISKGREWRIKSWCKACDATTRKR 815
Query: 385 SIFSNIKPQHASWCSCYSMACC*HWDHVYCLLQA*DK 495
++F I P HASW + + MAC + D+VY LLQ D+
Sbjct: 816 AVFCYI*P*HASWSTGHRMACHFNRDYVYSLLQTQDE 926
Score = 72.1 bits (151), Expect(4) = 8e-072
Identities = 31/47 (65%), Positives = 35/47 (74%)
Frame = -1 / -2
Query: 736 GETLSGRGMEEASSHLTLR*RHLDSAHPA*SGSTFPTMVPVNLCSGA 596
G+TLSGRG+ E SSHLTLR H D H S S+ PT+VPVNLCSGA
Sbjct: 1166 GDTLSGRGILEVSSHLTLRDLHFDFGHLVGSDSSIPTIVPVNLCSGA 1026
Score = 62.0 bits (129), Expect(3) = e-147
Identities = 23/31 (74%), Positives = 28/31 (90%)
Frame = +1 / +1
Query: 496 SPAEFVVPCDRYMESLKRNYPIGMRFKMRFK 588
SP+EF+VP D+YMES+K NY IGMRFKMRF+
Sbjct: 925 SPSEFIVPFDQYMESVKNNYSIGMRFKMRFE 1017
Score = 57.9 bits (120), Expect(2) = 3e-040
Identities = 28/66 (42%), Positives = 34/66 (51%)
Frame = -3 / -1
Query: 788 HWKRVDRGRADCRFYLPGRNPFRTWNGGSFIPPHLEVTPFRFSPSSLIRIHISNNGPSEP 609
HW R R+ Y P R R+ N S IP HLE +P F P S IR+ N+ S+P
Sbjct: 1218 HWNRTQSRRSKSWLYFPRRYSIRSRNTRSLIPSHLEGSPL*FWPPSRIRLFNPNDCASKP 1039
Query: 608 LFWSLF 591
L SLF
Sbjct: 1038 LLRSLF 1021
Score = 46.0 bits (94), Expect(3) = 4e-037
Identities = 30/68 (44%), Positives = 37/68 (54%)
Frame = +1 / +2
Query: 586 KVKRLQNKGSLGPLLEMWILIKLDGLNLNGVTSR*GGMKLPPFHVLKGFLPGK*NLQSAL 765
K KRL ++G L L + LI L G N +G SR* GM+L F L +L GK*+ L
Sbjct: 1016 KAKRLLSRGLLAQSLGLKSLILLGGQNQSGDPSR*DGMRLLVFLDLIEYLRGK*SQLLLL 1195
Query: 766 PLSTRFQC 789
L FQC
Sbjct: 1196 LL*VLFQC 1219
Score = 43.2 bits (88), Expect(4) = 8e-072
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = -2 / -2
Query: 126 AWRRSTENPP*VLVSEAVNVLQKECT 49
A R TENPP VLVS+AV VLQ ECT
Sbjct: 557 ACRLRTENPPCVLVSDAVKVLQNECT 480
Score = 38.2 bits (77), Expect(4) = 8e-072
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / -1
Query: 585 KPHFKSHPYRVISFQ*FHIAITGNNKLSW 499
K HF+SH RV+ HI I NNKL W
Sbjct: 1014 KSHFESHANRVVILNRLHILIERNNKLRW 928
Score = 25.4 bits (49), Expect(3) = 4e-037
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +2 / +2
Query: 503 LSLLFPVIAIWNH*NEITL*G*DLK*GLR 589
LSLLF I+IW+ TL *D K* L+
Sbjct: 932 LSLLFRSISIWSLLRITTLLA*DSK*DLK 1018
>emb|CS165547.1| Sequence 55 from Patent WO2005085453
Length = 2580
Score = 343 bits (744), Expect(3) = e-147
Identities = 139/149 (93%), Positives = 145/149 (97%)
Frame = +2 / +1
Query: 50 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIF 229
VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDM+RQPPTQELVAKDLH EWRFRHIF
Sbjct: 481 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIF 660
Query: 230 RGQPRRHLLQSGWSVFVSAKRLGAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSH 409
RGQPRRHLLQSGWSVFVS+KRL AGDAFIFLRG++GELRVGVRRAMRQQ NVPSSVISSH
Sbjct: 661 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSH 840
Query: 410 SMHLGVLATAWHAVNTGTMFTVYYKPRTS 496
SMHLGVLATAWHA++TGTMFTVYYKPRTS
Sbjct: 841 SMHLGVLATAWHAISTGTMFTVYYKPRTS 927
Score = 177 bits (382), Expect(4) = 8e-072
Identities = 75/105 (71%), Positives = 82/105 (78%)
Frame = -2 / -2
Query: 495 LVLGL**TVNMVPVLTACHAVARTPRCMLWLDITEDGTFACCLMARLTPTRSSPLSPLRK 316
LVLGL**TVN+VPV ACHAVA TPRCMLWLDITEDGTF CC +ARLTPT +SP SPLR
Sbjct: 926 LVLGL**TVNIVPVEMACHAVASTPRCMLWLDITEDGTFPCCRIARLTPTLNSPFSPLRN 747
Query: 315 MKASPAPRRLALTKTLQPLCKRCLRG*PLNMWRKRHSTPCRSLAT 181
+ ASPA L LT TL PLC +CLRG*P N+ RHS C+S AT
Sbjct: 746 INASPATSLLELTNTLHPLCSKCLRG*PRNICLNRHSFACKSFAT 612
Score = 160 bits (344), Expect(3) = e-147
Identities = 61/98 (62%), Positives = 76/98 (77%)
Frame = +3 / +1
Query: 588 GEEAPEQRFTGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPP 767
GEEAPEQRFTGTIVG + D W +SKWR LKVRWDE SSIPRP+RVSPW++EPA++PP
Sbjct: 1018 GEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPP 1197
Query: 768 PINPLPVHRPKRPRSNAVASLPESSAPTKEAAPKVTLE 881
++P+P+ RPKRPRSN S P+SS T+E K ++
Sbjct: 1198 ALSPVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMD 1311
Score = 130 bits (279), Expect(2) = 3e-040
Identities = 65/156 (41%), Positives = 92/156 (58%)
Frame = -1 / -1
Query: 490 PRLVVDSKHGPSVNSMPCCSKNTKMHAVA*YY*RWNICLLPHGTPDSYTKLPTITS*KDE 311
P VVD KH P N MPC + +KMHA+A Y R ++ LL H TP + + + *K +
Sbjct: 921 PGFVVDCKHSPC*NGMPCGGQYSKMHAMARYNRRRHVSLLSHRTPYTNS*FSILAP*KYK 742
Query: 310 GISSTKTLGTNKNTPATLQKMPSWLTSEYVAKAPFHTMQVLGYKLLCWRLTGHIQWRKTL 131
I+ G NK+TP TL +MP WLT EY++++P MQ+L LL RL+ HIQ +T
Sbjct: 741 RIACN*PFGANKHTPPTL*QMPPWLTPEYMSESPLICMQILCN*LLSGRLSRHIQRWETF 562
Query: 130 ICMAPQHRESTMSAGIRGCQCLAEGVHAWPCKCSRR 23
I M+P++R+STM + Q AE +H P + +R
Sbjct: 561 IRMSPKNRKSTMCTCVGCSQGFAERMHLEPRRWRKR 454
Score = 124 bits (266), Expect(3) = 4e-037
Identities = 58/157 (36%), Positives = 91/157 (57%)
Frame = +1 / +3
Query: 25 SCCTCKATRALLLQDIDSL*YQHSWWILGAAAPCR*VSSATGYDPSTSNTRACSQGPAWC 204
S T + A +LQ++D + ++++WWI + A C *+S +GY + S++R +G A
Sbjct: 456 SSSTSEVPGAFVLQNLDCIRHKYTWWIFCS*ATCG*MSPTSGYVSTASHSRVSCKGFACK 635
Query: 205 GMALSPHIQRSTTKASFAEWLECFC*CQASWCWRCLHLSKR**WGASCRSQACHEAASKC 384
+A+ +I STT+A EW+EC C* Q + C RC+++SK W +AC K
Sbjct: 636 *VAIQTYIPGSTTEAFATEWVECVC*LQKASCRRCVYISKGREWRIKSWCKACDATTRKR 815
Query: 385 SIFSNIKPQHASWCSCYSMACC*HWDHVYCLLQA*DK 495
++F I P HASW + + MAC + D+VY LLQ D+
Sbjct: 816 AVFCYI*P*HASWSTGHRMACHFNRDYVYSLLQTQDE 926
Score = 72.1 bits (151), Expect(4) = 8e-072
Identities = 31/47 (65%), Positives = 35/47 (74%)
Frame = -1 / -2
Query: 736 GETLSGRGMEEASSHLTLR*RHLDSAHPA*SGSTFPTMVPVNLCSGA 596
G+TLSGRG+ E SSHLTLR H D H S S+ PT+VPVNLCSGA
Sbjct: 1166 GDTLSGRGILEVSSHLTLRDLHFDFGHLVGSDSSIPTIVPVNLCSGA 1026
Score = 62.0 bits (129), Expect(3) = e-147
Identities = 23/31 (74%), Positives = 28/31 (90%)
Frame = +1 / +1
Query: 496 SPAEFVVPCDRYMESLKRNYPIGMRFKMRFK 588
SP+EF+VP D+YMES+K NY IGMRFKMRF+
Sbjct: 925 SPSEFIVPFDQYMESVKNNYSIGMRFKMRFE 1017
Score = 57.9 bits (120), Expect(2) = 3e-040
Identities = 28/66 (42%), Positives = 34/66 (51%)
Frame = -3 / -1
Query: 788 HWKRVDRGRADCRFYLPGRNPFRTWNGGSFIPPHLEVTPFRFSPSSLIRIHISNNGPSEP 609
HW R R+ Y P R R+ N S IP HLE +P F P S IR+ N+ S+P
Sbjct: 1218 HWNRTQSRRSKSWLYFPRRYSIRSRNTRSLIPSHLEGSPL*FWPPSRIRLFNPNDCASKP 1039
Query: 608 LFWSLF 591
L SLF
Sbjct: 1038 LLRSLF 1021
Score = 46.0 bits (94), Expect(3) = 4e-037
Identities = 30/68 (44%), Positives = 37/68 (54%)
Frame = +1 / +2
Query: 586 KVKRLQNKGSLGPLLEMWILIKLDGLNLNGVTSR*GGMKLPPFHVLKGFLPGK*NLQSAL 765
K KRL ++G L L + LI L G N +G SR* GM+L F L +L GK*+ L
Sbjct: 1016 KAKRLLSRGLLAQSLGLKSLILLGGQNQSGDPSR*DGMRLLVFLDLIEYLRGK*SQLLLL 1195
Query: 766 PLSTRFQC 789
L FQC
Sbjct: 1196 LL*VLFQC 1219
Score = 43.2 bits (88), Expect(4) = 8e-072
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = -2 / -2
Query: 126 AWRRSTENPP*VLVSEAVNVLQKECT 49
A R TENPP VLVS+AV VLQ ECT
Sbjct: 557 ACRLRTENPPCVLVSDAVKVLQNECT 480
Score = 38.2 bits (77), Expect(4) = 8e-072
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / -1
Query: 585 KPHFKSHPYRVISFQ*FHIAITGNNKLSW 499
K HF+SH RV+ HI I NNKL W
Sbjct: 1014 KSHFESHANRVVILNRLHILIERNNKLRW 928
Score = 25.4 bits (49), Expect(3) = 4e-037
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +2 / +2
Query: 503 LSLLFPVIAIWNH*NEITL*G*DLK*GLR 589
LSLLF I+IW+ TL *D K* L+
Sbjct: 932 LSLLFRSISIWSLLRITTLLA*DSK*DLK 1018
>emb|CS165497.1| Sequence 5 from Patent WO2005085453
Length = 2576
Score = 343 bits (744), Expect(3) = e-147
Identities = 139/149 (93%), Positives = 145/149 (97%)
Frame = +2 / +3
Query: 50 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIF 229
VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDM+RQPPTQELVAKDLH EWRFRHIF
Sbjct: 477 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIF 656
Query: 230 RGQPRRHLLQSGWSVFVSAKRLGAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSH 409
RGQPRRHLLQSGWSVFVS+KRL AGDAFIFLRG++GELRVGVRRAMRQQ NVPSSVISSH
Sbjct: 657 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSH 836
Query: 410 SMHLGVLATAWHAVNTGTMFTVYYKPRTS 496
SMHLGVLATAWHA++TGTMFTVYYKPRTS
Sbjct: 837 SMHLGVLATAWHAISTGTMFTVYYKPRTS 923
Score = 177 bits (382), Expect(4) = 8e-072
Identities = 75/105 (71%), Positives = 82/105 (78%)
Frame = -2 / -2
Query: 495 LVLGL**TVNMVPVLTACHAVARTPRCMLWLDITEDGTFACCLMARLTPTRSSPLSPLRK 316
LVLGL**TVN+VPV ACHAVA TPRCMLWLDITEDGTF CC +ARLTPT +SP SPLR
Sbjct: 922 LVLGL**TVNIVPVEMACHAVASTPRCMLWLDITEDGTFPCCRIARLTPTLNSPFSPLRN 743
Query: 315 MKASPAPRRLALTKTLQPLCKRCLRG*PLNMWRKRHSTPCRSLAT 181
+ ASPA L LT TL PLC +CLRG*P N+ RHS C+S AT
Sbjct: 742 INASPATSLLELTNTLHPLCSKCLRG*PRNICLNRHSFACKSFAT 608
Score = 160 bits (344), Expect(3) = e-147
Identities = 61/98 (62%), Positives = 76/98 (77%)
Frame = +3 / +3
Query: 588 GEEAPEQRFTGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPP 767
GEEAPEQRFTGTIVG + D W +SKWR LKVRWDE SSIPRP+RVSPW++EPA++PP
Sbjct: 1014 GEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPP 1193
Query: 768 PINPLPVHRPKRPRSNAVASLPESSAPTKEAAPKVTLE 881
++P+P+ RPKRPRSN S P+SS T+E K ++
Sbjct: 1194 ALSPVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMD 1307
Score = 130 bits (279), Expect(2) = 3e-040
Identities = 65/156 (41%), Positives = 92/156 (58%)
Frame = -1 / -1
Query: 490 PRLVVDSKHGPSVNSMPCCSKNTKMHAVA*YY*RWNICLLPHGTPDSYTKLPTITS*KDE 311
P VVD KH P N MPC + +KMHA+A Y R ++ LL H TP + + + *K +
Sbjct: 917 PGFVVDCKHSPC*NGMPCGGQYSKMHAMARYNRRRHVSLLSHRTPYTNS*FSILAP*KYK 738
Query: 310 GISSTKTLGTNKNTPATLQKMPSWLTSEYVAKAPFHTMQVLGYKLLCWRLTGHIQWRKTL 131
I+ G NK+TP TL +MP WLT EY++++P MQ+L LL RL+ HIQ +T
Sbjct: 737 RIACN*PFGANKHTPPTL*QMPPWLTPEYMSESPLICMQILCN*LLSGRLSRHIQRWETF 558
Query: 130 ICMAPQHRESTMSAGIRGCQCLAEGVHAWPCKCSRR 23
I M+P++R+STM + Q AE +H P + +R
Sbjct: 557 IRMSPKNRKSTMCTCVGCSQGFAERMHLEPRRWRKR 450
Score = 124 bits (266), Expect(3) = 4e-037
Identities = 58/157 (36%), Positives = 91/157 (57%)
Frame = +1 / +2
Query: 25 SCCTCKATRALLLQDIDSL*YQHSWWILGAAAPCR*VSSATGYDPSTSNTRACSQGPAWC 204
S T + A +LQ++D + ++++WWI + A C *+S +GY + S++R +G A
Sbjct: 452 SSSTSEVPGAFVLQNLDCIRHKYTWWIFCS*ATCG*MSPTSGYVSTASHSRVSCKGFACK 631
Query: 205 GMALSPHIQRSTTKASFAEWLECFC*CQASWCWRCLHLSKR**WGASCRSQACHEAASKC 384
+A+ +I STT+A EW+EC C* Q + C RC+++SK W +AC K
Sbjct: 632 *VAIQTYIPGSTTEAFATEWVECVC*LQKASCRRCVYISKGREWRIKSWCKACDATTRKR 811
Query: 385 SIFSNIKPQHASWCSCYSMACC*HWDHVYCLLQA*DK 495
++F I P HASW + + MAC + D+VY LLQ D+
Sbjct: 812 AVFCYI*P*HASWSTGHRMACHFNRDYVYSLLQTQDE 922
Score = 72.1 bits (151), Expect(4) = 8e-072
Identities = 31/47 (65%), Positives = 35/47 (74%)
Frame = -1 / -2
Query: 736 GETLSGRGMEEASSHLTLR*RHLDSAHPA*SGSTFPTMVPVNLCSGA 596
G+TLSGRG+ E SSHLTLR H D H S S+ PT+VPVNLCSGA
Sbjct: 1162 GDTLSGRGILEVSSHLTLRDLHFDFGHLVGSDSSIPTIVPVNLCSGA 1022
Score = 62.0 bits (129), Expect(3) = e-147
Identities = 23/31 (74%), Positives = 28/31 (90%)
Frame = +1 / +3
Query: 496 SPAEFVVPCDRYMESLKRNYPIGMRFKMRFK 588
SP+EF+VP D+YMES+K NY IGMRFKMRF+
Sbjct: 921 SPSEFIVPFDQYMESVKNNYSIGMRFKMRFE 1013
Score = 57.9 bits (120), Expect(2) = 3e-040
Identities = 28/66 (42%), Positives = 34/66 (51%)
Frame = -3 / -1
Query: 788 HWKRVDRGRADCRFYLPGRNPFRTWNGGSFIPPHLEVTPFRFSPSSLIRIHISNNGPSEP 609
HW R R+ Y P R R+ N S IP HLE +P F P S IR+ N+ S+P
Sbjct: 1214 HWNRTQSRRSKSWLYFPRRYSIRSRNTRSLIPSHLEGSPL*FWPPSRIRLFNPNDCASKP 1035
Query: 608 LFWSLF 591
L SLF
Sbjct: 1034 LLRSLF 1017
Score = 46.0 bits (94), Expect(3) = 4e-037
Identities = 30/68 (44%), Positives = 37/68 (54%)
Frame = +1 / +1
Query: 586 KVKRLQNKGSLGPLLEMWILIKLDGLNLNGVTSR*GGMKLPPFHVLKGFLPGK*NLQSAL 765
K KRL ++G L L + LI L G N +G SR* GM+L F L +L GK*+ L
Sbjct: 1012 KAKRLLSRGLLAQSLGLKSLILLGGQNQSGDPSR*DGMRLLVFLDLIEYLRGK*SQLLLL 1191
Query: 766 PLSTRFQC 789
L FQC
Sbjct: 1192 LL*VLFQC 1215
Score = 43.2 bits (88), Expect(4) = 8e-072
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = -2 / -2
Query: 126 AWRRSTENPP*VLVSEAVNVLQKECT 49
A R TENPP VLVS+AV VLQ ECT
Sbjct: 553 ACRLRTENPPCVLVSDAVKVLQNECT 476
Score = 38.2 bits (77), Expect(4) = 8e-072
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / -1
Query: 585 KPHFKSHPYRVISFQ*FHIAITGNNKLSW 499
K HF+SH RV+ HI I NNKL W
Sbjct: 1010 KSHFESHANRVVILNRLHILIERNNKLRW 924
Score = 25.4 bits (49), Expect(3) = 4e-037
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +2 / +1
Query: 503 LSLLFPVIAIWNH*NEITL*G*DLK*GLR 589
LSLLF I+IW+ TL *D K* L+
Sbjct: 928 LSLLFRSISIWSLLRITTLLA*DSK*DLK 1014
>emb|CS165548.1| Sequence 56 from Patent WO2005085453
Length = 2576
Score = 343 bits (744), Expect(3) = e-147
Identities = 139/149 (93%), Positives = 145/149 (97%)
Frame = +2 / +3
Query: 50 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIF 229
VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDM+RQPPTQELVAKDLH EWRFRHIF
Sbjct: 477 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIF 656
Query: 230 RGQPRRHLLQSGWSVFVSAKRLGAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSH 409
RGQPRRHLLQSGWSVFVS+KRL AGDAFIFLRG++GELRVGVRRAMRQQ NVPSSVISSH
Sbjct: 657 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSH 836
Query: 410 SMHLGVLATAWHAVNTGTMFTVYYKPRTS 496
SMHLGVLATAWHA++TGTMFTVYYKPRTS
Sbjct: 837 SMHLGVLATAWHAISTGTMFTVYYKPRTS 923
Score = 177 bits (382), Expect(4) = 8e-072
Identities = 75/105 (71%), Positives = 82/105 (78%)
Frame = -2 / -2
Query: 495 LVLGL**TVNMVPVLTACHAVARTPRCMLWLDITEDGTFACCLMARLTPTRSSPLSPLRK 316
LVLGL**TVN+VPV ACHAVA TPRCMLWLDITEDGTF CC +ARLTPT +SP SPLR
Sbjct: 922 LVLGL**TVNIVPVEMACHAVASTPRCMLWLDITEDGTFPCCRIARLTPTLNSPFSPLRN 743
Query: 315 MKASPAPRRLALTKTLQPLCKRCLRG*PLNMWRKRHSTPCRSLAT 181
+ ASPA L LT TL PLC +CLRG*P N+ RHS C+S AT
Sbjct: 742 INASPATSLLELTNTLHPLCSKCLRG*PRNICLNRHSFACKSFAT 608
Score = 160 bits (344), Expect(3) = e-147
Identities = 61/98 (62%), Positives = 76/98 (77%)
Frame = +3 / +3
Query: 588 GEEAPEQRFTGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPP 767
GEEAPEQRFTGTIVG + D W +SKWR LKVRWDE SSIPRP+RVSPW++EPA++PP
Sbjct: 1014 GEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPP 1193
Query: 768 PINPLPVHRPKRPRSNAVASLPESSAPTKEAAPKVTLE 881
++P+P+ RPKRPRSN S P+SS T+E K ++
Sbjct: 1194 ALSPVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMD 1307
Score = 130 bits (279), Expect(2) = 3e-040
Identities = 65/156 (41%), Positives = 92/156 (58%)
Frame = -1 / -1
Query: 490 PRLVVDSKHGPSVNSMPCCSKNTKMHAVA*YY*RWNICLLPHGTPDSYTKLPTITS*KDE 311
P VVD KH P N MPC + +KMHA+A Y R ++ LL H TP + + + *K +
Sbjct: 917 PGFVVDCKHSPC*NGMPCGGQYSKMHAMARYNRRRHVSLLSHRTPYTNS*FSILAP*KYK 738
Query: 310 GISSTKTLGTNKNTPATLQKMPSWLTSEYVAKAPFHTMQVLGYKLLCWRLTGHIQWRKTL 131
I+ G NK+TP TL +MP WLT EY++++P MQ+L LL RL+ HIQ +T
Sbjct: 737 RIACN*PFGANKHTPPTL*QMPPWLTPEYMSESPLICMQILCN*LLSGRLSRHIQRWETF 558
Query: 130 ICMAPQHRESTMSAGIRGCQCLAEGVHAWPCKCSRR 23
I M+P++R+STM + Q AE +H P + +R
Sbjct: 557 IRMSPKNRKSTMCTCVGCSQGFAERMHLEPRRWRKR 450
Score = 124 bits (266), Expect(3) = 4e-037
Identities = 58/157 (36%), Positives = 91/157 (57%)
Frame = +1 / +2
Query: 25 SCCTCKATRALLLQDIDSL*YQHSWWILGAAAPCR*VSSATGYDPSTSNTRACSQGPAWC 204
S T + A +LQ++D + ++++WWI + A C *+S +GY + S++R +G A
Sbjct: 452 SSSTSEVPGAFVLQNLDCIRHKYTWWIFCS*ATCG*MSPTSGYVSTASHSRVSCKGFACK 631
Query: 205 GMALSPHIQRSTTKASFAEWLECFC*CQASWCWRCLHLSKR**WGASCRSQACHEAASKC 384
+A+ +I STT+A EW+EC C* Q + C RC+++SK W +AC K
Sbjct: 632 *VAIQTYIPGSTTEAFATEWVECVC*LQKASCRRCVYISKGREWRIKSWCKACDATTRKR 811
Query: 385 SIFSNIKPQHASWCSCYSMACC*HWDHVYCLLQA*DK 495
++F I P HASW + + MAC + D+VY LLQ D+
Sbjct: 812 AVFCYI*P*HASWSTGHRMACHFNRDYVYSLLQTQDE 922
Score = 72.1 bits (151), Expect(4) = 8e-072
Identities = 31/47 (65%), Positives = 35/47 (74%)
Frame = -1 / -2
Query: 736 GETLSGRGMEEASSHLTLR*RHLDSAHPA*SGSTFPTMVPVNLCSGA 596
G+TLSGRG+ E SSHLTLR H D H S S+ PT+VPVNLCSGA
Sbjct: 1162 GDTLSGRGILEVSSHLTLRDLHFDFGHLVGSDSSIPTIVPVNLCSGA 1022
Score = 62.0 bits (129), Expect(3) = e-147
Identities = 23/31 (74%), Positives = 28/31 (90%)
Frame = +1 / +3
Query: 496 SPAEFVVPCDRYMESLKRNYPIGMRFKMRFK 588
SP+EF+VP D+YMES+K NY IGMRFKMRF+
Sbjct: 921 SPSEFIVPFDQYMESVKNNYSIGMRFKMRFE 1013
Score = 57.9 bits (120), Expect(2) = 3e-040
Identities = 28/66 (42%), Positives = 34/66 (51%)
Frame = -3 / -1
Query: 788 HWKRVDRGRADCRFYLPGRNPFRTWNGGSFIPPHLEVTPFRFSPSSLIRIHISNNGPSEP 609
HW R R+ Y P R R+ N S IP HLE +P F P S IR+ N+ S+P
Sbjct: 1214 HWNRTQSRRSKSWLYFPRRYSIRSRNTRSLIPSHLEGSPL*FWPPSRIRLFNPNDCASKP 1035
Query: 608 LFWSLF 591
L SLF
Sbjct: 1034 LLRSLF 1017
Score = 46.0 bits (94), Expect(3) = 4e-037
Identities = 30/68 (44%), Positives = 37/68 (54%)
Frame = +1 / +1
Query: 586 KVKRLQNKGSLGPLLEMWILIKLDGLNLNGVTSR*GGMKLPPFHVLKGFLPGK*NLQSAL 765
K KRL ++G L L + LI L G N +G SR* GM+L F L +L GK*+ L
Sbjct: 1012 KAKRLLSRGLLAQSLGLKSLILLGGQNQSGDPSR*DGMRLLVFLDLIEYLRGK*SQLLLL 1191
Query: 766 PLSTRFQC 789
L FQC
Sbjct: 1192 LL*VLFQC 1215
Score = 43.2 bits (88), Expect(4) = 8e-072
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = -2 / -2
Query: 126 AWRRSTENPP*VLVSEAVNVLQKECT 49
A R TENPP VLVS+AV VLQ ECT
Sbjct: 553 ACRLRTENPPCVLVSDAVKVLQNECT 476
Score = 38.2 bits (77), Expect(4) = 8e-072
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / -1
Query: 585 KPHFKSHPYRVISFQ*FHIAITGNNKLSW 499
K HF+SH RV+ HI I NNKL W
Sbjct: 1010 KSHFESHANRVVILNRLHILIERNNKLRW 924
Score = 25.4 bits (49), Expect(3) = 4e-037
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +2 / +1
Query: 503 LSLLFPVIAIWNH*NEITL*G*DLK*GLR 589
LSLLF I+IW+ TL *D K* L+
Sbjct: 928 LSLLFRSISIWSLLRITTLLA*DSK*DLK 1014
>gb|BT001072.1| Arabidopsis thaliana At5g62000/mtg10_20 mRNA, complete cds
Length = 2037
Score = 343 bits (744), Expect(3) = e-147
Identities = 139/149 (93%), Positives = 145/149 (97%)
Frame = +2 / +1
Query: 50 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIF 229
VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDM+RQPPTQELVAKDLH EWRFRHIF
Sbjct: 481 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIF 660
Query: 230 RGQPRRHLLQSGWSVFVSAKRLGAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSH 409
RGQPRRHLLQSGWSVFVS+KRL AGDAFIFLRG++GELRVGVRRAMRQQ NVPSSVISSH
Sbjct: 661 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSH 840
Query: 410 SMHLGVLATAWHAVNTGTMFTVYYKPRTS 496
SMHLGVLATAWHA++TGTMFTVYYKPRTS
Sbjct: 841 SMHLGVLATAWHAISTGTMFTVYYKPRTS 927
Score = 177 bits (382), Expect(4) = 8e-072
Identities = 75/105 (71%), Positives = 82/105 (78%)
Frame = -2 / -2
Query: 495 LVLGL**TVNMVPVLTACHAVARTPRCMLWLDITEDGTFACCLMARLTPTRSSPLSPLRK 316
LVLGL**TVN+VPV ACHAVA TPRCMLWLDITEDGTF CC +ARLTPT +SP SPLR
Sbjct: 926 LVLGL**TVNIVPVEMACHAVASTPRCMLWLDITEDGTFPCCRIARLTPTLNSPFSPLRN 747
Query: 315 MKASPAPRRLALTKTLQPLCKRCLRG*PLNMWRKRHSTPCRSLAT 181
+ ASPA L LT TL PLC +CLRG*P N+ RHS C+S AT
Sbjct: 746 INASPATSLLELTNTLHPLCSKCLRG*PRNICLNRHSFACKSFAT 612
Score = 160 bits (344), Expect(3) = e-147
Identities = 61/98 (62%), Positives = 76/98 (77%)
Frame = +3 / +1
Query: 588 GEEAPEQRFTGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPP 767
GEEAPEQRFTGTIVG + D W +SKWR LKVRWDE SSIPRP+RVSPW++EPA++PP
Sbjct: 1018 GEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPP 1197
Query: 768 PINPLPVHRPKRPRSNAVASLPESSAPTKEAAPKVTLE 881
++P+P+ RPKRPRSN S P+SS T+E K ++
Sbjct: 1198 ALSPVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMD 1311
Score = 130 bits (279), Expect(2) = 3e-039
Identities = 65/156 (41%), Positives = 92/156 (58%)
Frame = -1 / -1
Query: 490 PRLVVDSKHGPSVNSMPCCSKNTKMHAVA*YY*RWNICLLPHGTPDSYTKLPTITS*KDE 311
P VVD KH P N MPC + +KMHA+A Y R ++ LL H TP + + + *K +
Sbjct: 921 PGFVVDCKHSPC*NGMPCGGQYSKMHAMARYNRRRHVSLLSHRTPYTNS*FSILAP*KYK 742
Query: 310 GISSTKTLGTNKNTPATLQKMPSWLTSEYVAKAPFHTMQVLGYKLLCWRLTGHIQWRKTL 131
I+ G NK+TP TL +MP WLT EY++++P MQ+L LL RL+ HIQ +T
Sbjct: 741 RIACN*PFGANKHTPPTL*QMPPWLTPEYMSESPLICMQILCN*LLSGRLSRHIQRWETF 562
Query: 130 ICMAPQHRESTMSAGIRGCQCLAEGVHAWPCKCSRR 23
I M+P++R+STM + Q AE +H P + +R
Sbjct: 561 IRMSPKNRKSTMCTCVGCSQGFAERMHLEPRRWRKR 454
Score = 124 bits (266), Expect(3) = 4e-036
Identities = 58/157 (36%), Positives = 91/157 (57%)
Frame = +1 / +3
Query: 25 SCCTCKATRALLLQDIDSL*YQHSWWILGAAAPCR*VSSATGYDPSTSNTRACSQGPAWC 204
S T + A +LQ++D + ++++WWI + A C *+S +GY + S++R +G A
Sbjct: 456 SSSTSEVPGAFVLQNLDCIRHKYTWWIFCS*ATCG*MSPTSGYVSTASHSRVSCKGFACK 635
Query: 205 GMALSPHIQRSTTKASFAEWLECFC*CQASWCWRCLHLSKR**WGASCRSQACHEAASKC 384
+A+ +I STT+A EW+EC C* Q + C RC+++SK W +AC K
Sbjct: 636 *VAIQTYIPGSTTEAFATEWVECVC*LQKASCRRCVYISKGREWRIKSWCKACDATTRKR 815
Query: 385 SIFSNIKPQHASWCSCYSMACC*HWDHVYCLLQA*DK 495
++F I P HASW + + MAC + D+VY LLQ D+
Sbjct: 816 AVFCYI*P*HASWSTGHRMACHFNRDYVYSLLQTQDE 926
Score = 72.1 bits (151), Expect(4) = 8e-072
Identities = 31/47 (65%), Positives = 35/47 (74%)
Frame = -1 / -2
Query: 736 GETLSGRGMEEASSHLTLR*RHLDSAHPA*SGSTFPTMVPVNLCSGA 596
G+TLSGRG+ E SSHLTLR H D H S S+ PT+VPVNLCSGA
Sbjct: 1166 GDTLSGRGILEVSSHLTLRDLHFDFGHLVGSDSSIPTIVPVNLCSGA 1026
Score = 62.0 bits (129), Expect(3) = e-147
Identities = 23/31 (74%), Positives = 28/31 (90%)
Frame = +1 / +1
Query: 496 SPAEFVVPCDRYMESLKRNYPIGMRFKMRFK 588
SP+EF+VP D+YMES+K NY IGMRFKMRF+
Sbjct: 925 SPSEFIVPFDQYMESVKNNYSIGMRFKMRFE 1017
Score = 54.7 bits (113), Expect(2) = 3e-039
Identities = 27/66 (40%), Positives = 33/66 (50%)
Frame = -3 / -1
Query: 788 HWKRVDRGRADCRFYLPGRNPFRTWNGGSFIPPHLEVTPFRFSPSSLIRIHISNNGPSEP 609
HW R R+ Y P R R+ N S IP HLE +P F P S I + N+ S+P
Sbjct: 1218 HWNRTQSRRSKSWLYFPRRYSIRSRNTRSLIPSHLEGSPL*FWPPSRIGLFNPNDCASKP 1039
Query: 608 LFWSLF 591
L SLF
Sbjct: 1038 LLRSLF 1021
Score = 43.2 bits (88), Expect(4) = 8e-072
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = -2 / -2
Query: 126 AWRRSTENPP*VLVSEAVNVLQKECT 49
A R TENPP VLVS+AV VLQ ECT
Sbjct: 557 ACRLRTENPPCVLVSDAVKVLQNECT 480
Score = 42.8 bits (87), Expect(3) = 4e-036
Identities = 29/68 (42%), Positives = 36/68 (52%)
Frame = +1 / +2
Query: 586 KVKRLQNKGSLGPLLEMWILIKLDGLNLNGVTSR*GGMKLPPFHVLKGFLPGK*NLQSAL 765
K KRL ++G L L + I L G N +G SR* GM+L F L +L GK*+ L
Sbjct: 1016 KAKRLLSRGLLAQSLGLKSPILLGGQNQSGDPSR*DGMRLLVFLDLIEYLRGK*SQLLLL 1195
Query: 766 PLSTRFQC 789
L FQC
Sbjct: 1196 LL*VLFQC 1219
Score = 38.2 bits (77), Expect(4) = 8e-072
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / -1
Query: 585 KPHFKSHPYRVISFQ*FHIAITGNNKLSW 499
K HF+SH RV+ HI I NNKL W
Sbjct: 1014 KSHFESHANRVVILNRLHILIERNNKLRW 928
Score = 25.4 bits (49), Expect(3) = 4e-036
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +2 / +2
Query: 503 LSLLFPVIAIWNH*NEITL*G*DLK*GLR 589
LSLLF I+IW+ TL *D K* L+
Sbjct: 932 LSLLFRSISIWSLLRITTLLA*DSK*DLK 1018
>emb|CS165493.1| Sequence 1 from Patent WO2005085453
Length = 8718
Score = 132 bits (282), Expect(7) = e-118
Identities = 53/59 (89%), Positives = 57/59 (96%)
Frame = +2 / +3
Query: 314 IFLRGDSGELRVGVRRAMRQQANVPSSVISSHSMHLGVLATAWHAVNTGTMFTVYYKPR 490
IF RG++GELRVGVRRAMRQQ NVPSSVISSHSMHLGVLATAWHA++TGTMFTVYYKPR
Sbjct: 5784 IFYRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPR 5960
Score = 115 bits (246), Expect(7) = 3e-052
Identities = 48/60 (80%), Positives = 52/60 (86%)
Frame = -2 / -3
Query: 489 LGL**TVNMVPVLTACHAVARTPRCMLWLDITEDGTFACCLMARLTPTRSSPLSPLRKMK 310
LGL**TVN+VPV ACHAVA TPRCMLWLDITEDGTF CC +ARLTPT +SP SPL K+K
Sbjct: 5959 LGL**TVNIVPVEMACHAVASTPRCMLWLDITEDGTFPCCRIARLTPTLNSPFSPL*KIK 5780
Score = 102 bits (217), Expect(7) = e-118
Identities = 37/58 (63%), Positives = 49/58 (84%)
Frame = +3 / +3
Query: 684 KVRWDEASSIPRPERVSPWQIEPAVSPPPINPLPVHRPKRPRSNAVASLPESSAPTKE 857
+VRWDE SSIPRP+RVSPW++EPA++PP ++P+P+ RPKRPRSN S P+SS T+E
Sbjct: 6456 QVRWDETSSIPRPDRVSPWKVEPALAPPALSPVPMPRPKRPRSNIAPSSPDSSMLTRE 6629
Score = 85.4 bits (180), Expect(7) = e-118
Identities = 33/33 (100%), Positives = 33/33 (100%)
Frame = +2 / +1
Query: 50 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPL 148
VHSFCKTLTASDTSTHGGFSVLRRHADECLPPL
Sbjct: 5245 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPL 5343
Score = 73.5 bits (154), Expect(7) = e-118
Identities = 28/34 (82%), Positives = 29/34 (85%)
Frame = +2 / +1
Query: 134 CLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFRG 235
C P DM+RQPPTQELVAKDLH EWRFRHIFRG
Sbjct: 5431 CFFPQDMSRQPPTQELVAKDLHANEWRFRHIFRG 5532
Score = 71.2 bits (149), Expect(7) = e-118
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = +2 / +2
Query: 233 GQPRRHLLQSGWSVFVSAKRLGAGDAFIFLR 325
GQPRRHLLQSGWSVFVS+KRL AGDAFIFLR
Sbjct: 5624 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 5716
Score = 62.0 bits (129), Expect(7) = e-118
Identities = 23/31 (74%), Positives = 28/31 (90%)
Frame = +1 / +2
Query: 496 SPAEFVVPCDRYMESLKRNYPIGMRFKMRFK 588
SP+EF+VP D+YMES+K NY IGMRFKMRF+
Sbjct: 6098 SPSEFIVPFDQYMESVKNNYSIGMRFKMRFE 6190
Score = 48.7 bits (100), Expect(7) = 3e-052
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = -2 / -1
Query: 324 LRKMKASPAPRRLALTKTLQPLCKRCLRG*P 232
LR + ASPA L LT TL PLC +CLRG*P
Sbjct: 5715 LRNINASPATSLLELTNTLHPLCSKCLRG*P 5623
Score = 43.2 bits (88), Expect(7) = 3e-052
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = -2 / -2
Query: 126 AWRRSTENPP*VLVSEAVNVLQKECT 49
A R TENPP VLVS+AV VLQ ECT
Sbjct: 5321 ACRLRTENPPCVLVSDAVKVLQNECT 5244
Score = 42.8 bits (87), Expect(7) = e-118
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = +3 / +2
Query: 609 RFTGTIVGNVDPDQAGWAESKWRYLKV 689
RFTGTIVG + D W +SKWR LKV
Sbjct: 6305 RFTGTIVGIEESDPTRWPKSKWRSLKV 6385
Score = 38.2 bits (77), Expect(7) = 3e-052
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / -3
Query: 585 KPHFKSHPYRVISFQ*FHIAITGNNKLSW 499
K HF+SH RV+ HI I NNKL W
Sbjct: 6187 KSHFESHANRVVILNRLHILIERNNKLRW 6101
Score = 34.1 bits (68), Expect(7) = 3e-052
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -3 / -2
Query: 788 HWKRVDRGRADCRFYLPGRNPFRTWNGGSFIPPHLE 681
HW R R+ Y P R R+ N S IP HL+
Sbjct: 6560 HWNRTQSRRSKSWLYFPRRYSIRSRNTRSLIPSHLK 6453
Score = 33.6 bits (67), Expect(7) = 3e-052
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = -1 / -1
Query: 688 TLR*RHLDSAHPA*SGSTFPTMVPVNL 608
TLR H D H S S+ PT+VPVNL
Sbjct: 6384 TLRDLHFDFGHLVGSDSSIPTIVPVNL 6304
Score = 29.9 bits (59), Expect(7) = 3e-052
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = -1 / -1
Query: 256 QKMPSWLTSEYVAKAPFHTMQVLGYKLLCWRLTGHIQWRKT 134
+K+ T EY++++P MQ+L LL RL+ HI +T
Sbjct: 5553 KKVTDSYTPEYMSESPLICMQILCN*LLSGRLSRHILREET 5431
>emb|CS165496.1| Sequence 4 from Patent WO2005085453
Length = 8718
Score = 132 bits (282), Expect(7) = e-118
Identities = 53/59 (89%), Positives = 57/59 (96%)
Frame = +2 / +3
Query: 314 IFLRGDSGELRVGVRRAMRQQANVPSSVISSHSMHLGVLATAWHAVNTGTMFTVYYKPR 490
IF RG++GELRVGVRRAMRQQ NVPSSVISSHSMHLGVLATAWHA++TGTMFTVYYKPR
Sbjct: 5784 IFYRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPR 5960
Score = 115 bits (246), Expect(7) = 3e-052
Identities = 48/60 (80%), Positives = 52/60 (86%)
Frame = -2 / -3
Query: 489 LGL**TVNMVPVLTACHAVARTPRCMLWLDITEDGTFACCLMARLTPTRSSPLSPLRKMK 310
LGL**TVN+VPV ACHAVA TPRCMLWLDITEDGTF CC +ARLTPT +SP SPL K+K
Sbjct: 5959 LGL**TVNIVPVEMACHAVASTPRCMLWLDITEDGTFPCCRIARLTPTLNSPFSPL*KIK 5780
Score = 102 bits (217), Expect(7) = e-118
Identities = 37/58 (63%), Positives = 49/58 (84%)
Frame = +3 / +3
Query: 684 KVRWDEASSIPRPERVSPWQIEPAVSPPPINPLPVHRPKRPRSNAVASLPESSAPTKE 857
+VRWDE SSIPRP+RVSPW++EPA++PP ++P+P+ RPKRPRSN S P+SS T+E
Sbjct: 6456 QVRWDETSSIPRPDRVSPWKVEPALAPPALSPVPMPRPKRPRSNIAPSSPDSSMLTRE 6629
Score = 85.4 bits (180), Expect(7) = e-118
Identities = 33/33 (100%), Positives = 33/33 (100%)
Frame = +2 / +1
Query: 50 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPL 148
VHSFCKTLTASDTSTHGGFSVLRRHADECLPPL
Sbjct: 5245 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPL 5343
Score = 73.5 bits (154), Expect(7) = e-118
Identities = 28/34 (82%), Positives = 29/34 (85%)
Frame = +2 / +1
Query: 134 CLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFRG 235
C P DM+RQPPTQELVAKDLH EWRFRHIFRG
Sbjct: 5431 CFFPQDMSRQPPTQELVAKDLHANEWRFRHIFRG 5532
Score = 71.2 bits (149), Expect(7) = e-118
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = +2 / +2
Query: 233 GQPRRHLLQSGWSVFVSAKRLGAGDAFIFLR 325
GQPRRHLLQSGWSVFVS+KRL AGDAFIFLR
Sbjct: 5624 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 5716
Score = 62.0 bits (129), Expect(7) = e-118
Identities = 23/31 (74%), Positives = 28/31 (90%)
Frame = +1 / +2
Query: 496 SPAEFVVPCDRYMESLKRNYPIGMRFKMRFK 588
SP+EF+VP D+YMES+K NY IGMRFKMRF+
Sbjct: 6098 SPSEFIVPFDQYMESVKNNYSIGMRFKMRFE 6190
Score = 48.7 bits (100), Expect(7) = 3e-052
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = -2 / -1
Query: 324 LRKMKASPAPRRLALTKTLQPLCKRCLRG*P 232
LR + ASPA L LT TL PLC +CLRG*P
Sbjct: 5715 LRNINASPATSLLELTNTLHPLCSKCLRG*P 5623
Score = 43.2 bits (88), Expect(7) = 3e-052
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = -2 / -2
Query: 126 AWRRSTENPP*VLVSEAVNVLQKECT 49
A R TENPP VLVS+AV VLQ ECT
Sbjct: 5321 ACRLRTENPPCVLVSDAVKVLQNECT 5244
Score = 42.8 bits (87), Expect(7) = e-118
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = +3 / +2
Query: 609 RFTGTIVGNVDPDQAGWAESKWRYLKV 689
RFTGTIVG + D W +SKWR LKV
Sbjct: 6305 RFTGTIVGIEESDPTRWPKSKWRSLKV 6385
Score = 38.2 bits (77), Expect(7) = 3e-052
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / -3
Query: 585 KPHFKSHPYRVISFQ*FHIAITGNNKLSW 499
K HF+SH RV+ HI I NNKL W
Sbjct: 6187 KSHFESHANRVVILNRLHILIERNNKLRW 6101
Score = 34.1 bits (68), Expect(7) = 3e-052
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -3 / -2
Query: 788 HWKRVDRGRADCRFYLPGRNPFRTWNGGSFIPPHLE 681
HW R R+ Y P R R+ N S IP HL+
Sbjct: 6560 HWNRTQSRRSKSWLYFPRRYSIRSRNTRSLIPSHLK 6453
Score = 33.6 bits (67), Expect(7) = 3e-052
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = -1 / -1
Query: 688 TLR*RHLDSAHPA*SGSTFPTMVPVNL 608
TLR H D H S S+ PT+VPVNL
Sbjct: 6384 TLRDLHFDFGHLVGSDSSIPTIVPVNL 6304
Score = 29.9 bits (59), Expect(7) = 3e-052
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = -1 / -1
Query: 256 QKMPSWLTSEYVAKAPFHTMQVLGYKLLCWRLTGHIQWRKT 134
+K+ T EY++++P MQ+L LL RL+ HI +T
Sbjct: 5553 KKVTDSYTPEYMSESPLICMQILCN*LLSGRLSRHILREET 5431
>dbj|AB016880.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MTG10
Length = 81284
Score = 132 bits (282), Expect(7) = e-112
Identities = 53/59 (89%), Positives = 57/59 (96%)
Frame = +2 / +2
Query: 314 IFLRGDSGELRVGVRRAMRQQANVPSSVISSHSMHLGVLATAWHAVNTGTMFTVYYKPR 490
IF RG++GELRVGVRRAMRQQ NVPSSVISSHSMHLGVLATAWHA++TGTMFTVYYKPR
Sbjct: 15005 IFYRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPR 15181
Score = 115 bits (246), Expect(7) = 1e-046
Identities = 48/60 (80%), Positives = 52/60 (86%)
Frame = -2 / -3
Query: 489 LGL**TVNMVPVLTACHAVARTPRCMLWLDITEDGTFACCLMARLTPTRSSPLSPLRKMK 310
LGL**TVN+VPV ACHAVA TPRCMLWLDITEDGTF CC +ARLTPT +SP SPL K+K
Sbjct: 15180 LGL**TVNIVPVEMACHAVASTPRCMLWLDITEDGTFPCCRIARLTPTLNSPFSPL*KIK 15001
Score = 102 bits (217), Expect(7) = e-112
Identities = 37/58 (63%), Positives = 49/58 (84%)
Frame = +3 / +2
Query: 684 KVRWDEASSIPRPERVSPWQIEPAVSPPPINPLPVHRPKRPRSNAVASLPESSAPTKE 857
+VRWDE SSIPRP+RVSPW++EPA++PP ++P+P+ RPKRPRSN S P+SS T+E
Sbjct: 15677 QVRWDETSSIPRPDRVSPWKVEPALAPPALSPVPMPRPKRPRSNIAPSSPDSSMLTRE 15850
Score = 85.4 bits (180), Expect(7) = e-112
Identities = 33/33 (100%), Positives = 33/33 (100%)
Frame = +2 / +3
Query: 50 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPL 148
VHSFCKTLTASDTSTHGGFSVLRRHADECLPPL
Sbjct: 14466 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPL 14564
Score = 73.5 bits (154), Expect(7) = e-112
Identities = 28/34 (82%), Positives = 29/34 (85%)
Frame = +2 / +3
Query: 134 CLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFRG 235
C P DM+RQPPTQELVAKDLH EWRFRHIFRG
Sbjct: 14652 CFFPQDMSRQPPTQELVAKDLHANEWRFRHIFRG 14753
Score = 71.2 bits (149), Expect(7) = e-112
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = +2 / +1
Query: 233 GQPRRHLLQSGWSVFVSAKRLGAGDAFIFLR 325
GQPRRHLLQSGWSVFVS+KRL AGDAFIFLR
Sbjct: 14845 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 14937
Score = 62.0 bits (129), Expect(7) = e-112
Identities = 23/31 (74%), Positives = 28/31 (90%)
Frame = +1 / +1
Query: 496 SPAEFVVPCDRYMESLKRNYPIGMRFKMRFK 588
SP+EF+VP D+YMES+K NY IGMRFKMRF+
Sbjct: 15319 SPSEFIVPFDQYMESVKNNYSIGMRFKMRFE 15411
Score = 48.7 bits (100), Expect(7) = 1e-046
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = -2 / -1
Query: 324 LRKMKASPAPRRLALTKTLQPLCKRCLRG*P 232
LR + ASPA L LT TL PLC +CLRG*P
Sbjct: 14936 LRNINASPATSLLELTNTLHPLCSKCLRG*P 14844
Score = 43.2 bits (88), Expect(7) = 1e-046
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = -2 / -2
Query: 126 AWRRSTENPP*VLVSEAVNVLQKECT 49
A R TENPP VLVS+AV VLQ ECT
Sbjct: 14542 ACRLRTENPPCVLVSDAVKVLQNECT 14465
Score = 42.8 bits (87), Expect(7) = e-112
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = +3 / +1
Query: 609 RFTGTIVGNVDPDQAGWAESKWRYLKV 689
RFTGTIVG + D W +SKWR LKV
Sbjct: 15526 RFTGTIVGIEESDPTRWPKSKWRSLKV 15606
Score = 38.2 bits (77), Expect(7) = 1e-046
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / -3
Query: 585 KPHFKSHPYRVISFQ*FHIAITGNNKLSW 499
K HF+SH RV+ HI I NNKL W
Sbjct: 15408 KSHFESHANRVVILNRLHILIERNNKLRW 15322
Score = 34.1 bits (68), Expect(7) = 1e-046
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -3 / -2
Query: 788 HWKRVDRGRADCRFYLPGRNPFRTWNGGSFIPPHLE 681
HW R R+ Y P R R+ N S IP HL+
Sbjct: 15781 HWNRTQSRRSKSWLYFPRRYSIRSRNTRSLIPSHLK 15674
Score = 33.6 bits (67), Expect(7) = 1e-046
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = -1 / -1
Query: 688 TLR*RHLDSAHPA*SGSTFPTMVPVNL 608
TLR H D H S S+ PT+VPVNL
Sbjct: 15605 TLRDLHFDFGHLVGSDSSIPTIVPVNL 15525
Score = 29.9 bits (59), Expect(7) = 1e-046
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = -1 / -1
Query: 256 QKMPSWLTSEYVAKAPFHTMQVLGYKLLCWRLTGHIQWRKT 134
+K+ T EY++++P MQ+L LL RL+ HI +T
Sbjct: 14774 KKVTDSYTPEYMSESPLICMQILCN*LLSGRLSRHILREET 14652
>ref|NM_104668.2| Arabidopsis thaliana ARF1 (AUXIN RESPONSE FACTOR 1); transcription
factor AT1G59750 (ARF1) transcript variant AT1G59750.1
mRNA, complete cds
Length = 2470
Score = 307 bits (664), Expect(2) = e-104
Identities = 123/149 (82%), Positives = 137/149 (91%)
Frame = +2 / +1
Query: 50 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIF 229
VHSFCKTLTASDTSTHGGFSVLRRHAD+CLPPLDM++QPP QELVA DLH EW FRHIF
Sbjct: 613 VHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIF 792
Query: 230 RGQPRRHLLQSGWSVFVSAKRLGAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSH 409
RGQPRRHLL +GWSVFVS+K+L AGDAFIFLRG++ ELRVGVRR MRQQ N+PSSVISSH
Sbjct: 793 RGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSH 972
Query: 410 SMHLGVLATAWHAVNTGTMFTVYYKPRTS 496
SMH+GVLATA HA+ TGT+F+V+YKPRTS
Sbjct: 973 SMHIGVLATAAHAITTGTIFSVFYKPRTS 1059
Score = 127 bits (273), Expect(4) = 3e-047
Identities = 61/105 (58%), Positives = 71/105 (67%)
Frame = -2 / -3
Query: 495 LVLGL**TVNMVPVLTACHAVARTPRCMLWLDITEDGTFACCLMARLTPTRSSPLSPLRK 316
LVLGL* T +VPV+ A AVARTP CML L++T+DG CCLM RLTPTRSS SPL+
Sbjct: 1058 LVLGL*KTEKIVPVVMA*AAVARTPICML*LEMTDDGILVCCLMCRLTPTRSSSFSPLKN 879
Query: 315 MKASPAPRRLALTKTLQPLCKRCLRG*PLNMWRKRHSTPCRSLAT 181
MKASPA LTKTL P+ + G P M K HS C+S+AT
Sbjct: 878 MKASPATSFFELTKTLHPVVSK*RLGWPRKMCLKCHSLLCKSVAT 744
Score = 96.4 bits (204), Expect(3) = 6e-028
Identities = 48/109 (44%), Positives = 68/109 (62%)
Frame = -1 / -2
Query: 385 NICLLPHGTPDSYTKLPTITS*KDEGISSTKTLGTNKNTPATLQKMPSWLTSEYVAKAPF 206
+I LL H P++Y++L +T *+ E I+S L NKNTP++ +M WL SE V K PF
Sbjct: 948 DISLLSHVPPNTYSELFILTP*EYESITSH*FLRANKNTPSSC*QMTPWLASENVPKMPF 769
Query: 205 HTMQVLGYKLLCWRLTGHIQWRKTLICMAPQHRESTMSAGIRGCQCLAE 59
+Q+ + L L GHIQ +T+ICM+P HRE+TM A + CLA+
Sbjct: 768 TIVQISCNQFLPRWLLGHIQGWETIICMSP*HREATMCACV*SS*CLAK 622
Score = 95.5 bits (202), Expect(2) = e-104
Identities = 36/58 (62%), Positives = 47/58 (81%)
Frame = +3 / +1
Query: 588 GEEAPEQRFTGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVS 761
GEEAPE+RF+GTIVG + + W +S+WR LKV+WDE SS+ RPERVSPW++EP V+
Sbjct: 1150 GEEAPEKRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVA 1323
Score = 72.1 bits (151), Expect(3) = 4e-029
Identities = 35/96 (36%), Positives = 48/96 (50%)
Frame = +1 / +3
Query: 208 MALSPHIQRSTTKASFAEWLECFC*CQASWCWRCLHLSKR**WGASCRSQACHEAASKCS 387
MA H R T + W+ECFC* + + W C H+ K * A R A HE
Sbjct: 771 MAF*AHFPRPTKASFANNWMECFC*LEETSGW*CFHILKG*E*RAPSRC*AAHETTD*YP 950
Query: 388 IFSNIKPQHASWCSCYSMACC*HWDHVYCLLQA*DK 495
+ + K HA W C S +C + ++++CLLQA DK
Sbjct: 951 VICHFKS*HAYWGPCNSSSCHYNRNNLFCLLQAKDK 1058
Score = 54.7 bits (113), Expect(3) = 4e-029
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = +1 / +3
Query: 34 TCKATRALLLQDIDSL*YQHSWWILGAAAPCR*VSSATGYDPSTSNTR 177
T K R +LQD + ++H+WW+LGA CR*+S GY P+T+ R
Sbjct: 597 T*KVHRTFILQDTNCFRHKHTWWLLGATETCR*LSPTLGYVPTTTVAR 740
Score = 49.6 bits (102), Expect(4) = 3e-047
Identities = 25/48 (52%), Positives = 29/48 (60%)
Frame = -1 / -3
Query: 739 QGETLSGRGMEEASSHLTLR*RHLDSAHPA*SGSTFPTMVPVNLCSGA 596
QGETLSGR +E SSH T H +S S PT+VP+NL SGA
Sbjct: 1301 QGETLSGRNTDEGSSH*TFSDLHSESCQTEDLFS*TPTIVPLNLFSGA 1158
Score = 44.6 bits (91), Expect(4) = 3e-047
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -2 / -3
Query: 117 RSTENPP*VLVSEAVNVLQKECT 49
RSTE PP VLVSEAV+VLQ ECT
Sbjct: 680 RSTEKPPCVLVSEAVSVLQNECT 612
Score = 42.3 bits (86), Expect(3) = 4e-029
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +1 / +1
Query: 496 SPAEFVVPCDRYMESLKRNYPIGMRFKMRFKVKRLQNKGSLGPLL 630
S +EF+V +RY+E+ + +GMRFKMRF+ + K G ++
Sbjct: 1057 SRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPEKRFSGTIV 1191
Score = 38.6 bits (78), Expect(3) = 6e-028
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = -1 / -2
Query: 496 TCPRLVVDSKHGPSVNSMPCCSKNTKMHAVA* 401
TCP LV D K N M CC K+ MHA+ *
Sbjct: 1059 TCPWLVEDRKDCSCCNGMSCCCKDPNMHAMT* 964
Score = 29.9 bits (59), Expect(3) = 6e-028
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = -3 / -2
Query: 740 PGRNPFRTWNGGSFIPPHLEVTPFRFSPSSLIRIHISNNGPSEPLFWSLF 591
P N FRT F+P +L +PFR P + +N +EP S F
Sbjct: 1302 PR*NSFRTKYR*GFVPLNL*RSPFRIMPDRRLIFLNTNYCATEPFLGSFF 1153
Score = 25.8 bits (50), Expect(4) = 3e-047
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -2 / -2
Query: 588 LKPHFKSHPYRVISFQ*FHIAITGNNKL 505
L+ H ++H YR + F I I +NKL
Sbjct: 1149 LESHLETHAYRQLLGLSFEIPIDAHNKL 1066
>ref|NM_179499.1| Arabidopsis thaliana ARF1 (AUXIN RESPONSE FACTOR 1); transcription
factor AT1G59750 (ARF1) transcript variant AT1G59750.2
mRNA, complete cds
Length = 2452
Score = 307 bits (664), Expect(2) = e-104
Identities = 123/149 (82%), Positives = 137/149 (91%)
Frame = +2 / +1
Query: 50 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIF 229
VHSFCKTLTASDTSTHGGFSVLRRHAD+CLPPLDM++QPP QELVA DLH EW FRHIF
Sbjct: 613 VHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIF 792
Query: 230 RGQPRRHLLQSGWSVFVSAKRLGAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSH 409
RGQPRRHLL +GWSVFVS+K+L AGDAFIFLRG++ ELRVGVRR MRQQ N+PSSVISSH
Sbjct: 793 RGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSH 972
Query: 410 SMHLGVLATAWHAVNTGTMFTVYYKPRTS 496
SMH+GVLATA HA+ TGT+F+V+YKPRTS
Sbjct: 973 SMHIGVLATAAHAITTGTIFSVFYKPRTS 1059
Score = 127 bits (273), Expect(4) = 3e-047
Identities = 61/105 (58%), Positives = 71/105 (67%)
Frame = -2 / -3
Query: 495 LVLGL**TVNMVPVLTACHAVARTPRCMLWLDITEDGTFACCLMARLTPTRSSPLSPLRK 316
LVLGL* T +VPV+ A AVARTP CML L++T+DG CCLM RLTPTRSS SPL+
Sbjct: 1058 LVLGL*KTEKIVPVVMA*AAVARTPICML*LEMTDDGILVCCLMCRLTPTRSSSFSPLKN 879
Query: 315 MKASPAPRRLALTKTLQPLCKRCLRG*PLNMWRKRHSTPCRSLAT 181
MKASPA LTKTL P+ + G P M K HS C+S+AT
Sbjct: 878 MKASPATSFFELTKTLHPVVSK*RLGWPRKMCLKCHSLLCKSVAT 744
Score = 96.4 bits (204), Expect(3) = 6e-028
Identities = 48/109 (44%), Positives = 68/109 (62%)
Frame = -1 / -2
Query: 385 NICLLPHGTPDSYTKLPTITS*KDEGISSTKTLGTNKNTPATLQKMPSWLTSEYVAKAPF 206
+I LL H P++Y++L +T *+ E I+S L NKNTP++ +M WL SE V K PF
Sbjct: 948 DISLLSHVPPNTYSELFILTP*EYESITSH*FLRANKNTPSSC*QMTPWLASENVPKMPF 769
Query: 205 HTMQVLGYKLLCWRLTGHIQWRKTLICMAPQHRESTMSAGIRGCQCLAE 59
+Q+ + L L GHIQ +T+ICM+P HRE+TM A + CLA+
Sbjct: 768 TIVQISCNQFLPRWLLGHIQGWETIICMSP*HREATMCACV*SS*CLAK 622
Score = 95.5 bits (202), Expect(2) = e-104
Identities = 36/58 (62%), Positives = 47/58 (81%)
Frame = +3 / +1
Query: 588 GEEAPEQRFTGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVS 761
GEEAPE+RF+GTIVG + + W +S+WR LKV+WDE SS+ RPERVSPW++EP V+
Sbjct: 1150 GEEAPEKRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVA 1323
Score = 72.1 bits (151), Expect(3) = 4e-029
Identities = 35/96 (36%), Positives = 48/96 (50%)
Frame = +1 / +3
Query: 208 MALSPHIQRSTTKASFAEWLECFC*CQASWCWRCLHLSKR**WGASCRSQACHEAASKCS 387
MA H R T + W+ECFC* + + W C H+ K * A R A HE
Sbjct: 771 MAF*AHFPRPTKASFANNWMECFC*LEETSGW*CFHILKG*E*RAPSRC*AAHETTD*YP 950
Query: 388 IFSNIKPQHASWCSCYSMACC*HWDHVYCLLQA*DK 495
+ + K HA W C S +C + ++++CLLQA DK
Sbjct: 951 VICHFKS*HAYWGPCNSSSCHYNRNNLFCLLQAKDK 1058
Score = 54.7 bits (113), Expect(3) = 4e-029
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = +1 / +3
Query: 34 TCKATRALLLQDIDSL*YQHSWWILGAAAPCR*VSSATGYDPSTSNTR 177
T K R +LQD + ++H+WW+LGA CR*+S GY P+T+ R
Sbjct: 597 T*KVHRTFILQDTNCFRHKHTWWLLGATETCR*LSPTLGYVPTTTVAR 740
Score = 49.6 bits (102), Expect(4) = 3e-047
Identities = 25/48 (52%), Positives = 29/48 (60%)
Frame = -1 / -3
Query: 739 QGETLSGRGMEEASSHLTLR*RHLDSAHPA*SGSTFPTMVPVNLCSGA 596
QGETLSGR +E SSH T H +S S PT+VP+NL SGA
Sbjct: 1301 QGETLSGRNTDEGSSH*TFSDLHSESCQTEDLFS*TPTIVPLNLFSGA 1158
Score = 44.6 bits (91), Expect(4) = 3e-047
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -2 / -3
Query: 117 RSTENPP*VLVSEAVNVLQKECT 49
RSTE PP VLVSEAV+VLQ ECT
Sbjct: 680 RSTEKPPCVLVSEAVSVLQNECT 612
Score = 42.3 bits (86), Expect(3) = 4e-029
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +1 / +1
Query: 496 SPAEFVVPCDRYMESLKRNYPIGMRFKMRFKVKRLQNKGSLGPLL 630
S +EF+V +RY+E+ + +GMRFKMRF+ + K G ++
Sbjct: 1057 SRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPEKRFSGTIV 1191
Score = 38.6 bits (78), Expect(3) = 6e-028
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = -1 / -2
Query: 496 TCPRLVVDSKHGPSVNSMPCCSKNTKMHAVA* 401
TCP LV D K N M CC K+ MHA+ *
Sbjct: 1059 TCPWLVEDRKDCSCCNGMSCCCKDPNMHAMT* 964
Score = 29.9 bits (59), Expect(3) = 6e-028
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = -3 / -2
Query: 740 PGRNPFRTWNGGSFIPPHLEVTPFRFSPSSLIRIHISNNGPSEPLFWSLF 591
P N FRT F+P +L +PFR P + +N +EP S F
Sbjct: 1302 PR*NSFRTKYR*GFVPLNL*RSPFRIMPDRRLIFLNTNYCATEPFLGSFF 1153
Score = 25.8 bits (50), Expect(4) = 3e-047
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -2 / -2
Query: 588 LKPHFKSHPYRVISFQ*FHIAITGNNKL 505
L+ H ++H YR + F I I +NKL
Sbjct: 1149 LESHLETHAYRQLLGLSFEIPIDAHNKL 1066
>gb|U83245.1|ATU83245 Arabidopsis thaliana auxin response factor 1 (ARF1) mRNA, complete
cds
Length = 2332
Score = 307 bits (664), Expect(2) = e-104
Identities = 123/149 (82%), Positives = 137/149 (91%)
Frame = +2 / +1
Query: 50 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIF 229
VHSFCKTLTASDTSTHGGFSVLRRHAD+CLPPLDM++QPP QELVA DLH EW FRHIF
Sbjct: 475 VHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIF 654
Query: 230 RGQPRRHLLQSGWSVFVSAKRLGAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSH 409
RGQPRRHLL +GWSVFVS+K+L AGDAFIFLRG++ ELRVGVRR MRQQ N+PSSVISSH
Sbjct: 655 RGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSH 834
Query: 410 SMHLGVLATAWHAVNTGTMFTVYYKPRTS 496
SMH+GVLATA HA+ TGT+F+V+YKPRTS
Sbjct: 835 SMHIGVLATAAHAITTGTIFSVFYKPRTS 921
Score = 127 bits (273), Expect(4) = 3e-047
Identities = 61/105 (58%), Positives = 71/105 (67%)
Frame = -2 / -3
Query: 495 LVLGL**TVNMVPVLTACHAVARTPRCMLWLDITEDGTFACCLMARLTPTRSSPLSPLRK 316
LVLGL* T +VPV+ A AVARTP CML L++T+DG CCLM RLTPTRSS SPL+
Sbjct: 920 LVLGL*KTEKIVPVVMA*AAVARTPICML*LEMTDDGILVCCLMCRLTPTRSSSFSPLKN 741
Query: 315 MKASPAPRRLALTKTLQPLCKRCLRG*PLNMWRKRHSTPCRSLAT 181
MKASPA LTKTL P+ + G P M K HS C+S+AT
Sbjct: 740 MKASPATSFFELTKTLHPVVSK*RLGWPRKMCLKCHSLLCKSVAT 606
Score = 96.4 bits (204), Expect(3) = 6e-028
Identities = 48/109 (44%), Positives = 68/109 (62%)
Frame = -1 / -2
Query: 385 NICLLPHGTPDSYTKLPTITS*KDEGISSTKTLGTNKNTPATLQKMPSWLTSEYVAKAPF 206
+I LL H P++Y++L +T *+ E I+S L NKNTP++ +M WL SE V K PF
Sbjct: 810 DISLLSHVPPNTYSELFILTP*EYESITSH*FLRANKNTPSSC*QMTPWLASENVPKMPF 631
Query: 205 HTMQVLGYKLLCWRLTGHIQWRKTLICMAPQHRESTMSAGIRGCQCLAE 59
+Q+ + L L GHIQ +T+ICM+P HRE+TM A + CLA+
Sbjct: 630 TIVQISCNQFLPRWLLGHIQGWETIICMSP*HREATMCACV*SS*CLAK 484
Score = 95.5 bits (202), Expect(2) = e-104
Identities = 36/58 (62%), Positives = 47/58 (81%)
Frame = +3 / +1
Query: 588 GEEAPEQRFTGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVS 761
GEEAPE+RF+GTIVG + + W +S+WR LKV+WDE SS+ RPERVSPW++EP V+
Sbjct: 1012 GEEAPEKRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVA 1185
Score = 72.1 bits (151), Expect(3) = 4e-029
Identities = 35/96 (36%), Positives = 48/96 (50%)
Frame = +1 / +3
Query: 208 MALSPHIQRSTTKASFAEWLECFC*CQASWCWRCLHLSKR**WGASCRSQACHEAASKCS 387
MA H R T + W+ECFC* + + W C H+ K * A R A HE
Sbjct: 633 MAF*AHFPRPTKASFANNWMECFC*LEETSGW*CFHILKG*E*RAPSRC*AAHETTD*YP 812
Query: 388 IFSNIKPQHASWCSCYSMACC*HWDHVYCLLQA*DK 495
+ + K HA W C S +C + ++++CLLQA DK
Sbjct: 813 VICHFKS*HAYWGPCNSSSCHYNRNNLFCLLQAKDK 920
Score = 54.7 bits (113), Expect(3) = 4e-029
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = +1 / +3
Query: 34 TCKATRALLLQDIDSL*YQHSWWILGAAAPCR*VSSATGYDPSTSNTR 177
T K R +LQD + ++H+WW+LGA CR*+S GY P+T+ R
Sbjct: 459 T*KVHRTFILQDTNCFRHKHTWWLLGATETCR*LSPTLGYVPTTTVAR 602
Score = 49.6 bits (102), Expect(4) = 3e-047
Identities = 25/48 (52%), Positives = 29/48 (60%)
Frame = -1 / -3
Query: 739 QGETLSGRGMEEASSHLTLR*RHLDSAHPA*SGSTFPTMVPVNLCSGA 596
QGETLSGR +E SSH T H +S S PT+VP+NL SGA
Sbjct: 1163 QGETLSGRNTDEGSSH*TFSDLHSESCQTEDLFS*TPTIVPLNLFSGA 1020
Score = 44.6 bits (91), Expect(4) = 3e-047
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -2 / -3
Query: 117 RSTENPP*VLVSEAVNVLQKECT 49
RSTE PP VLVSEAV+VLQ ECT
Sbjct: 542 RSTEKPPCVLVSEAVSVLQNECT 474
Score = 42.3 bits (86), Expect(3) = 4e-029
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +1 / +1
Query: 496 SPAEFVVPCDRYMESLKRNYPIGMRFKMRFKVKRLQNKGSLGPLL 630
S +EF+V +RY+E+ + +GMRFKMRF+ + K G ++
Sbjct: 919 SRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPEKRFSGTIV 1053
Score = 38.6 bits (78), Expect(3) = 6e-028
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = -1 / -2
Query: 496 TCPRLVVDSKHGPSVNSMPCCSKNTKMHAVA* 401
TCP LV D K N M CC K+ MHA+ *
Sbjct: 921 TCPWLVEDRKDCSCCNGMSCCCKDPNMHAMT* 826
Score = 29.9 bits (59), Expect(3) = 6e-028
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = -3 / -2
Query: 740 PGRNPFRTWNGGSFIPPHLEVTPFRFSPSSLIRIHISNNGPSEPLFWSLF 591
P N FRT F+P +L +PFR P + +N +EP S F
Sbjct: 1164 PR*NSFRTKYR*GFVPLNL*RSPFRIMPDRRLIFLNTNYCATEPFLGSFF 1015
Score = 25.8 bits (50), Expect(4) = 3e-047
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -2 / -2
Query: 588 LKPHFKSHPYRVISFQ*FHIAITGNNKL 505
L+ H ++H YR + F I I +NKL
Sbjct: 1011 LESHLETHAYRQLLGLSFEIPIDAHNKL 928
>ref|NM_001036131.1| Arabidopsis thaliana ARF1 (AUXIN RESPONSE FACTOR 1); transcription
factor AT1G59750 (ARF1) transcript variant AT1G59750.3
mRNA, complete cds
Length = 2290
Score = 307 bits (664), Expect(2) = e-104
Identities = 123/149 (82%), Positives = 137/149 (91%)
Frame = +2 / +2
Query: 50 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIF 229
VHSFCKTLTASDTSTHGGFSVLRRHAD+CLPPLDM++QPP QELVA DLH EW FRHIF
Sbjct: 413 VHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIF 592
Query: 230 RGQPRRHLLQSGWSVFVSAKRLGAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSH 409
RGQPRRHLL +GWSVFVS+K+L AGDAFIFLRG++ ELRVGVRR MRQQ N+PSSVISSH
Sbjct: 593 RGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSH 772
Query: 410 SMHLGVLATAWHAVNTGTMFTVYYKPRTS 496
SMH+GVLATA HA+ TGT+F+V+YKPRTS
Sbjct: 773 SMHIGVLATAAHAITTGTIFSVFYKPRTS 859
Score = 127 bits (273), Expect(4) = 3e-047
Identities = 61/105 (58%), Positives = 71/105 (67%)
Frame = -2 / -2
Query: 495 LVLGL**TVNMVPVLTACHAVARTPRCMLWLDITEDGTFACCLMARLTPTRSSPLSPLRK 316
LVLGL* T +VPV+ A AVARTP CML L++T+DG CCLM RLTPTRSS SPL+
Sbjct: 858 LVLGL*KTEKIVPVVMA*AAVARTPICML*LEMTDDGILVCCLMCRLTPTRSSSFSPLKN 679
Query: 315 MKASPAPRRLALTKTLQPLCKRCLRG*PLNMWRKRHSTPCRSLAT 181
MKASPA LTKTL P+ + G P M K HS C+S+AT
Sbjct: 678 MKASPATSFFELTKTLHPVVSK*RLGWPRKMCLKCHSLLCKSVAT 544
Score = 96.4 bits (204), Expect(3) = 6e-028
Identities = 48/109 (44%), Positives = 68/109 (62%)
Frame = -1 / -1
Query: 385 NICLLPHGTPDSYTKLPTITS*KDEGISSTKTLGTNKNTPATLQKMPSWLTSEYVAKAPF 206
+I LL H P++Y++L +T *+ E I+S L NKNTP++ +M WL SE V K PF
Sbjct: 748 DISLLSHVPPNTYSELFILTP*EYESITSH*FLRANKNTPSSC*QMTPWLASENVPKMPF 569
Query: 205 HTMQVLGYKLLCWRLTGHIQWRKTLICMAPQHRESTMSAGIRGCQCLAE 59
+Q+ + L L GHIQ +T+ICM+P HRE+TM A + CLA+
Sbjct: 568 TIVQISCNQFLPRWLLGHIQGWETIICMSP*HREATMCACV*SS*CLAK 422
Score = 95.5 bits (202), Expect(2) = e-104
Identities = 36/58 (62%), Positives = 47/58 (81%)
Frame = +3 / +2
Query: 588 GEEAPEQRFTGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVS 761
GEEAPE+RF+GTIVG + + W +S+WR LKV+WDE SS+ RPERVSPW++EP V+
Sbjct: 950 GEEAPEKRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVA 1123
Score = 72.1 bits (151), Expect(3) = 4e-029
Identities = 35/96 (36%), Positives = 48/96 (50%)
Frame = +1 / +1
Query: 208 MALSPHIQRSTTKASFAEWLECFC*CQASWCWRCLHLSKR**WGASCRSQACHEAASKCS 387
MA H R T + W+ECFC* + + W C H+ K * A R A HE
Sbjct: 571 MAF*AHFPRPTKASFANNWMECFC*LEETSGW*CFHILKG*E*RAPSRC*AAHETTD*YP 750
Query: 388 IFSNIKPQHASWCSCYSMACC*HWDHVYCLLQA*DK 495
+ + K HA W C S +C + ++++CLLQA DK
Sbjct: 751 VICHFKS*HAYWGPCNSSSCHYNRNNLFCLLQAKDK 858
Score = 54.7 bits (113), Expect(3) = 4e-029
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = +1 / +1
Query: 34 TCKATRALLLQDIDSL*YQHSWWILGAAAPCR*VSSATGYDPSTSNTR 177
T K R +LQD + ++H+WW+LGA CR*+S GY P+T+ R
Sbjct: 397 T*KVHRTFILQDTNCFRHKHTWWLLGATETCR*LSPTLGYVPTTTVAR 540
Score = 49.6 bits (102), Expect(4) = 3e-047
Identities = 25/48 (52%), Positives = 29/48 (60%)
Frame = -1 / -2
Query: 739 QGETLSGRGMEEASSHLTLR*RHLDSAHPA*SGSTFPTMVPVNLCSGA 596
QGETLSGR +E SSH T H +S S PT+VP+NL SGA
Sbjct: 1101 QGETLSGRNTDEGSSH*TFSDLHSESCQTEDLFS*TPTIVPLNLFSGA 958
Score = 44.6 bits (91), Expect(4) = 3e-047
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -2 / -2
Query: 117 RSTENPP*VLVSEAVNVLQKECT 49
RSTE PP VLVSEAV+VLQ ECT
Sbjct: 480 RSTEKPPCVLVSEAVSVLQNECT 412
Score = 42.3 bits (86), Expect(3) = 4e-029
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +1 / +2
Query: 496 SPAEFVVPCDRYMESLKRNYPIGMRFKMRFKVKRLQNKGSLGPLL 630
S +EF+V +RY+E+ + +GMRFKMRF+ + K G ++
Sbjct: 857 SRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPEKRFSGTIV 991
Score = 38.6 bits (78), Expect(3) = 6e-028
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = -1 / -1
Query: 496 TCPRLVVDSKHGPSVNSMPCCSKNTKMHAVA* 401
TCP LV D K N M CC K+ MHA+ *
Sbjct: 859 TCPWLVEDRKDCSCCNGMSCCCKDPNMHAMT* 764
Score = 29.9 bits (59), Expect(3) = 6e-028
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = -3 / -1
Query: 740 PGRNPFRTWNGGSFIPPHLEVTPFRFSPSSLIRIHISNNGPSEPLFWSLF 591
P N FRT F+P +L +PFR P + +N +EP S F
Sbjct: 1102 PR*NSFRTKYR*GFVPLNL*RSPFRIMPDRRLIFLNTNYCATEPFLGSFF 953
Score = 25.8 bits (50), Expect(4) = 3e-047
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -2 / -1
Query: 588 LKPHFKSHPYRVISFQ*FHIAITGNNKL 505
L+ H ++H YR + F I I +NKL
Sbjct: 949 LESHLETHAYRQLLGLSFEIPIDAHNKL 866
>gb|BT002748.1| Arabidopsis thaliana clone C105458 auxin response factor 1
(At1g59750) mRNA, complete cds
Length = 2029
Score = 307 bits (664), Expect(2) = e-104
Identities = 123/149 (82%), Positives = 137/149 (91%)
Frame = +2 / +1
Query: 50 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIF 229
VHSFCKTLTASDTSTHGGFSVLRRHAD+CLPPLDM++QPP QELVA DLH EW FRHIF
Sbjct: 361 VHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIF 540
Query: 230 RGQPRRHLLQSGWSVFVSAKRLGAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSH 409
RGQPRRHLL +GWSVFVS+K+L AGDAFIFLRG++ ELRVGVRR MRQQ N+PSSVISSH
Sbjct: 541 RGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSH 720
Query: 410 SMHLGVLATAWHAVNTGTMFTVYYKPRTS 496
SMH+GVLATA HA+ TGT+F+V+YKPRTS
Sbjct: 721 SMHIGVLATAAHAITTGTIFSVFYKPRTS 807
Score = 127 bits (273), Expect(4) = 3e-047
Identities = 61/105 (58%), Positives = 71/105 (67%)
Frame = -2 / -3
Query: 495 LVLGL**TVNMVPVLTACHAVARTPRCMLWLDITEDGTFACCLMARLTPTRSSPLSPLRK 316
LVLGL* T +VPV+ A AVARTP CML L++T+DG CCLM RLTPTRSS SPL+
Sbjct: 806 LVLGL*KTEKIVPVVMA*AAVARTPICML*LEMTDDGILVCCLMCRLTPTRSSSFSPLKN 627
Query: 315 MKASPAPRRLALTKTLQPLCKRCLRG*PLNMWRKRHSTPCRSLAT 181
MKASPA LTKTL P+ + G P M K HS C+S+AT
Sbjct: 626 MKASPATSFFELTKTLHPVVSK*RLGWPRKMCLKCHSLLCKSVAT 492
Score = 96.4 bits (204), Expect(3) = 6e-028
Identities = 48/109 (44%), Positives = 68/109 (62%)
Frame = -1 / -2
Query: 385 NICLLPHGTPDSYTKLPTITS*KDEGISSTKTLGTNKNTPATLQKMPSWLTSEYVAKAPF 206
+I LL H P++Y++L +T *+ E I+S L NKNTP++ +M WL SE V K PF
Sbjct: 696 DISLLSHVPPNTYSELFILTP*EYESITSH*FLRANKNTPSSC*QMTPWLASENVPKMPF 517
Query: 205 HTMQVLGYKLLCWRLTGHIQWRKTLICMAPQHRESTMSAGIRGCQCLAE 59
+Q+ + L L GHIQ +T+ICM+P HRE+TM A + CLA+
Sbjct: 516 TIVQISCNQFLPRWLLGHIQGWETIICMSP*HREATMCACV*SS*CLAK 370
Score = 95.5 bits (202), Expect(2) = e-104
Identities = 36/58 (62%), Positives = 47/58 (81%)
Frame = +3 / +1
Query: 588 GEEAPEQRFTGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVS 761
GEEAPE+RF+GTIVG + + W +S+WR LKV+WDE SS+ RPERVSPW++EP V+
Sbjct: 898 GEEAPEKRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVA 1071
Score = 72.1 bits (151), Expect(3) = 4e-029
Identities = 35/96 (36%), Positives = 48/96 (50%)
Frame = +1 / +3
Query: 208 MALSPHIQRSTTKASFAEWLECFC*CQASWCWRCLHLSKR**WGASCRSQACHEAASKCS 387
MA H R T + W+ECFC* + + W C H+ K * A R A HE
Sbjct: 519 MAF*AHFPRPTKASFANNWMECFC*LEETSGW*CFHILKG*E*RAPSRC*AAHETTD*YP 698
Query: 388 IFSNIKPQHASWCSCYSMACC*HWDHVYCLLQA*DK 495
+ + K HA W C S +C + ++++CLLQA DK
Sbjct: 699 VICHFKS*HAYWGPCNSSSCHYNRNNLFCLLQAKDK 806
Score = 54.7 bits (113), Expect(3) = 4e-029
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = +1 / +3
Query: 34 TCKATRALLLQDIDSL*YQHSWWILGAAAPCR*VSSATGYDPSTSNTR 177
T K R +LQD + ++H+WW+LGA CR*+S GY P+T+ R
Sbjct: 345 T*KVHRTFILQDTNCFRHKHTWWLLGATETCR*LSPTLGYVPTTTVAR 488
Score = 49.6 bits (102), Expect(4) = 3e-047
Identities = 25/48 (52%), Positives = 29/48 (60%)
Frame = -1 / -3
Query: 739 QGETLSGRGMEEASSHLTLR*RHLDSAHPA*SGSTFPTMVPVNLCSGA 596
QGETLSGR +E SSH T H +S S PT+VP+NL SGA
Sbjct: 1049 QGETLSGRNTDEGSSH*TFSDLHSESCQTEDLFS*TPTIVPLNLFSGA 906
Score = 44.6 bits (91), Expect(4) = 3e-047
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -2 / -3
Query: 117 RSTENPP*VLVSEAVNVLQKECT 49
RSTE PP VLVSEAV+VLQ ECT
Sbjct: 428 RSTEKPPCVLVSEAVSVLQNECT 360
Score = 42.3 bits (86), Expect(3) = 4e-029
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +1 / +1
Query: 496 SPAEFVVPCDRYMESLKRNYPIGMRFKMRFKVKRLQNKGSLGPLL 630
S +EF+V +RY+E+ + +GMRFKMRF+ + K G ++
Sbjct: 805 SRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPEKRFSGTIV 939
Score = 38.6 bits (78), Expect(3) = 6e-028
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = -1 / -2
Query: 496 TCPRLVVDSKHGPSVNSMPCCSKNTKMHAVA* 401
TCP LV D K N M CC K+ MHA+ *
Sbjct: 807 TCPWLVEDRKDCSCCNGMSCCCKDPNMHAMT* 712
Score = 29.9 bits (59), Expect(3) = 6e-028
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = -3 / -2
Query: 740 PGRNPFRTWNGGSFIPPHLEVTPFRFSPSSLIRIHISNNGPSEPLFWSLF 591
P N FRT F+P +L +PFR P + +N +EP S F
Sbjct: 1050 PR*NSFRTKYR*GFVPLNL*RSPFRIMPDRRLIFLNTNYCATEPFLGSFF 901
Score = 25.8 bits (50), Expect(4) = 3e-047
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -2 / -2
Query: 588 LKPHFKSHPYRVISFQ*FHIAITGNNKL 505
L+ H ++H YR + F I I +NKL
Sbjct: 897 LESHLETHAYRQLLGLSFEIPIDAHNKL 814
>emb|AX507306.1| Sequence 2001 from Patent WO0216655
Length = 1998
Score = 307 bits (664), Expect(2) = e-104
Identities = 123/149 (82%), Positives = 137/149 (91%)
Frame = +2 / +1
Query: 50 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIF 229
VHSFCKTLTASDTSTHGGFSVLRRHAD+CLPPLDM++QPP QELVA DLH EW FRHIF
Sbjct: 361 VHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIF 540
Query: 230 RGQPRRHLLQSGWSVFVSAKRLGAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSH 409
RGQPRRHLL +GWSVFVS+K+L AGDAFIFLRG++ ELRVGVRR MRQQ N+PSSVISSH
Sbjct: 541 RGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSH 720
Query: 410 SMHLGVLATAWHAVNTGTMFTVYYKPRTS 496
SMH+GVLATA HA+ TGT+F+V+YKPRTS
Sbjct: 721 SMHIGVLATAAHAITTGTIFSVFYKPRTS 807
Score = 127 bits (273), Expect(4) = 3e-047
Identities = 61/105 (58%), Positives = 71/105 (67%)
Frame = -2 / -2
Query: 495 LVLGL**TVNMVPVLTACHAVARTPRCMLWLDITEDGTFACCLMARLTPTRSSPLSPLRK 316
LVLGL* T +VPV+ A AVARTP CML L++T+DG CCLM RLTPTRSS SPL+
Sbjct: 806 LVLGL*KTEKIVPVVMA*AAVARTPICML*LEMTDDGILVCCLMCRLTPTRSSSFSPLKN 627
Query: 315 MKASPAPRRLALTKTLQPLCKRCLRG*PLNMWRKRHSTPCRSLAT 181
MKASPA LTKTL P+ + G P M K HS C+S+AT
Sbjct: 626 MKASPATSFFELTKTLHPVVSK*RLGWPRKMCLKCHSLLCKSVAT 492
Score = 96.4 bits (204), Expect(3) = 6e-028
Identities = 48/109 (44%), Positives = 68/109 (62%)
Frame = -1 / -1
Query: 385 NICLLPHGTPDSYTKLPTITS*KDEGISSTKTLGTNKNTPATLQKMPSWLTSEYVAKAPF 206
+I LL H P++Y++L +T *+ E I+S L NKNTP++ +M WL SE V K PF
Sbjct: 696 DISLLSHVPPNTYSELFILTP*EYESITSH*FLRANKNTPSSC*QMTPWLASENVPKMPF 517
Query: 205 HTMQVLGYKLLCWRLTGHIQWRKTLICMAPQHRESTMSAGIRGCQCLAE 59
+Q+ + L L GHIQ +T+ICM+P HRE+TM A + CLA+
Sbjct: 516 TIVQISCNQFLPRWLLGHIQGWETIICMSP*HREATMCACV*SS*CLAK 370
Score = 95.5 bits (202), Expect(2) = e-104
Identities = 36/58 (62%), Positives = 47/58 (81%)
Frame = +3 / +1
Query: 588 GEEAPEQRFTGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVS 761
GEEAPE+RF+GTIVG + + W +S+WR LKV+WDE SS+ RPERVSPW++EP V+
Sbjct: 898 GEEAPEKRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVA 1071
Score = 72.1 bits (151), Expect(3) = 4e-029
Identities = 35/96 (36%), Positives = 48/96 (50%)
Frame = +1 / +3
Query: 208 MALSPHIQRSTTKASFAEWLECFC*CQASWCWRCLHLSKR**WGASCRSQACHEAASKCS 387
MA H R T + W+ECFC* + + W C H+ K * A R A HE
Sbjct: 519 MAF*AHFPRPTKASFANNWMECFC*LEETSGW*CFHILKG*E*RAPSRC*AAHETTD*YP 698
Query: 388 IFSNIKPQHASWCSCYSMACC*HWDHVYCLLQA*DK 495
+ + K HA W C S +C + ++++CLLQA DK
Sbjct: 699 VICHFKS*HAYWGPCNSSSCHYNRNNLFCLLQAKDK 806
Score = 54.7 bits (113), Expect(3) = 4e-029
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = +1 / +3
Query: 34 TCKATRALLLQDIDSL*YQHSWWILGAAAPCR*VSSATGYDPSTSNTR 177
T K R +LQD + ++H+WW+LGA CR*+S GY P+T+ R
Sbjct: 345 T*KVHRTFILQDTNCFRHKHTWWLLGATETCR*LSPTLGYVPTTTVAR 488
Score = 49.6 bits (102), Expect(4) = 3e-047
Identities = 25/48 (52%), Positives = 29/48 (60%)
Frame = -1 / -2
Query: 739 QGETLSGRGMEEASSHLTLR*RHLDSAHPA*SGSTFPTMVPVNLCSGA 596
QGETLSGR +E SSH T H +S S PT+VP+NL SGA
Sbjct: 1049 QGETLSGRNTDEGSSH*TFSDLHSESCQTEDLFS*TPTIVPLNLFSGA 906
Score = 44.6 bits (91), Expect(4) = 3e-047
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -2 / -2
Query: 117 RSTENPP*VLVSEAVNVLQKECT 49
RSTE PP VLVSEAV+VLQ ECT
Sbjct: 428 RSTEKPPCVLVSEAVSVLQNECT 360
Score = 42.3 bits (86), Expect(3) = 4e-029
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +1 / +1
Query: 496 SPAEFVVPCDRYMESLKRNYPIGMRFKMRFKVKRLQNKGSLGPLL 630
S +EF+V +RY+E+ + +GMRFKMRF+ + K G ++
Sbjct: 805 SRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPEKRFSGTIV 939
Score = 38.6 bits (78), Expect(3) = 6e-028
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = -1 / -1
Query: 496 TCPRLVVDSKHGPSVNSMPCCSKNTKMHAVA* 401
TCP LV D K N M CC K+ MHA+ *
Sbjct: 807 TCPWLVEDRKDCSCCNGMSCCCKDPNMHAMT* 712
Score = 29.9 bits (59), Expect(3) = 6e-028
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = -3 / -1
Query: 740 PGRNPFRTWNGGSFIPPHLEVTPFRFSPSSLIRIHISNNGPSEPLFWSLF 591
P N FRT F+P +L +PFR P + +N +EP S F
Sbjct: 1050 PR*NSFRTKYR*GFVPLNL*RSPFRIMPDRRLIFLNTNYCATEPFLGSFF 901
Score = 25.8 bits (50), Expect(4) = 3e-047
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -2 / -1
Query: 588 LKPHFKSHPYRVISFQ*FHIAITGNNKL 505
L+ H ++H YR + F I I +NKL
Sbjct: 897 LESHLETHAYRQLLGLSFEIPIDAHNKL 814
>gb|AY133723.1| Arabidopsis thaliana auxin response factor 1 (At1g59750) mRNA,
complete cds
Length = 2464
Score = 303 bits (656), Expect(2) = e-103
Identities = 122/149 (81%), Positives = 136/149 (91%)
Frame = +2 / +3
Query: 50 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIF 229
VHSFCKTLTASDTST GGFSVLRRHAD+CLPPLDM++QPP QELVA DLH EW FRHIF
Sbjct: 615 VHSFCKTLTASDTSTQGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIF 794
Query: 230 RGQPRRHLLQSGWSVFVSAKRLGAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSH 409
RGQPRRHLL +GWSVFVS+K+L AGDAFIFLRG++ ELRVGVRR MRQQ N+PSSVISSH
Sbjct: 795 RGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSH 974
Query: 410 SMHLGVLATAWHAVNTGTMFTVYYKPRTS 496
SMH+GVLATA HA+ TGT+F+V+YKPRTS
Sbjct: 975 SMHIGVLATAAHAITTGTIFSVFYKPRTS 1061
Score = 127 bits (273), Expect(4) = 3e-047
Identities = 61/105 (58%), Positives = 71/105 (67%)
Frame = -2 / -1
Query: 495 LVLGL**TVNMVPVLTACHAVARTPRCMLWLDITEDGTFACCLMARLTPTRSSPLSPLRK 316
LVLGL* T +VPV+ A AVARTP CML L++T+DG CCLM RLTPTRSS SPL+
Sbjct: 1060 LVLGL*KTEKIVPVVMA*AAVARTPICML*LEMTDDGILVCCLMCRLTPTRSSSFSPLKN 881
Query: 315 MKASPAPRRLALTKTLQPLCKRCLRG*PLNMWRKRHSTPCRSLAT 181
MKASPA LTKTL P+ + G P M K HS C+S+AT
Sbjct: 880 MKASPATSFFELTKTLHPVVSK*RLGWPRKMCLKCHSLLCKSVAT 746
Score = 95.5 bits (202), Expect(2) = e-103
Identities = 36/58 (62%), Positives = 47/58 (81%)
Frame = +3 / +3
Query: 588 GEEAPEQRFTGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVS 761
GEEAPE+RF+GTIVG + + W +S+WR LKV+WDE SS+ RPERVSPW++EP V+
Sbjct: 1152 GEEAPEKRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVA 1325
Score = 95.0 bits (201), Expect(3) = 2e-027
Identities = 47/109 (43%), Positives = 68/109 (62%)
Frame = -1 / -3
Query: 385 NICLLPHGTPDSYTKLPTITS*KDEGISSTKTLGTNKNTPATLQKMPSWLTSEYVAKAPF 206
+I LL H P++Y++L +T *+ E I+S L NKNTP++ +M WL SE V K PF
Sbjct: 950 DISLLSHVPPNTYSELFILTP*EYESITSH*FLRANKNTPSSC*QMTPWLASENVPKMPF 771
Query: 205 HTMQVLGYKLLCWRLTGHIQWRKTLICMAPQHRESTMSAGIRGCQCLAE 59
+Q+ + L L GHIQ +T+ICM+P HRE+T+ A + CLA+
Sbjct: 770 TIVQISCNQFLPRWLLGHIQGWETIICMSP*HREATLCACV*SS*CLAK 624
Score = 72.1 bits (151), Expect(3) = 3e-027
Identities = 35/96 (36%), Positives = 48/96 (50%)
Frame = +1 / +2
Query: 208 MALSPHIQRSTTKASFAEWLECFC*CQASWCWRCLHLSKR**WGASCRSQACHEAASKCS 387
MA H R T + W+ECFC* + + W C H+ K * A R A HE
Sbjct: 773 MAF*AHFPRPTKASFANNWMECFC*LEETSGW*CFHILKG*E*RAPSRC*AAHETTD*YP 952
Query: 388 IFSNIKPQHASWCSCYSMACC*HWDHVYCLLQA*DK 495
+ + K HA W C S +C + ++++CLLQA DK
Sbjct: 953 VICHFKS*HAYWGPCNSSSCHYNRNNLFCLLQAKDK 1060
Score = 49.6 bits (102), Expect(4) = 3e-047
Identities = 25/48 (52%), Positives = 29/48 (60%)
Frame = -1 / -1
Query: 739 QGETLSGRGMEEASSHLTLR*RHLDSAHPA*SGSTFPTMVPVNLCSGA 596
QGETLSGR +E SSH T H +S S PT+VP+NL SGA
Sbjct: 1303 QGETLSGRNTDEGSSH*TFSDLHSESCQTEDLFS*TPTIVPLNLFSGA 1160
Score = 48.3 bits (99), Expect(3) = 3e-027
Identities = 20/48 (41%), Positives = 29/48 (60%)
Frame = +1 / +2
Query: 34 TCKATRALLLQDIDSL*YQHSWWILGAAAPCR*VSSATGYDPSTSNTR 177
T K R +LQD + ++H+ W+LGA CR*+S GY P+T+ R
Sbjct: 599 T*KVHRTFILQDTNCFRHKHTRWLLGATETCR*LSPTLGYVPTTTVAR 742
Score = 44.6 bits (91), Expect(4) = 3e-047
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -2 / -1
Query: 117 RSTENPP*VLVSEAVNVLQKECT 49
RSTE PP VLVSEAV+VLQ ECT
Sbjct: 682 RSTEKPPCVLVSEAVSVLQNECT 614
Score = 42.3 bits (86), Expect(3) = 3e-027
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +1 / +3
Query: 496 SPAEFVVPCDRYMESLKRNYPIGMRFKMRFKVKRLQNKGSLGPLL 630
S +EF+V +RY+E+ + +GMRFKMRF+ + K G ++
Sbjct: 1059 SRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPEKRFSGTIV 1193
Score = 38.6 bits (78), Expect(3) = 2e-027
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = -1 / -3
Query: 496 TCPRLVVDSKHGPSVNSMPCCSKNTKMHAVA* 401
TCP LV D K N M CC K+ MHA+ *
Sbjct: 1061 TCPWLVEDRKDCSCCNGMSCCCKDPNMHAMT* 966
Score = 29.9 bits (59), Expect(3) = 2e-027
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = -3 / -3
Query: 740 PGRNPFRTWNGGSFIPPHLEVTPFRFSPSSLIRIHISNNGPSEPLFWSLF 591
P N FRT F+P +L +PFR P + +N +EP S F
Sbjct: 1304 PR*NSFRTKYR*GFVPLNL*RSPFRIMPDRRLIFLNTNYCATEPFLGSFF 1155
Score = 25.8 bits (50), Expect(4) = 3e-047
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -2 / -3
Query: 588 LKPHFKSHPYRVISFQ*FHIAITGNNKL 505
L+ H ++H YR + F I I +NKL
Sbjct: 1151 LESHLETHAYRQLLGLSFEIPIDAHNKL 1068
>ref|NM_001036629.1| Arabidopsis thaliana ARF9 (AUXIN RESPONSE FACTOR 9) AT4G23980 (ARF9)
transcript variant AT4G23980.2 mRNA, complete cds
Length = 2835
Score = 291 bits (629), Expect(4) = e-101
Identities = 117/149 (78%), Positives = 133/149 (89%)
Frame = +2 / +2
Query: 50 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIF 229
VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDMT+Q PTQELVA+D+HG +W+F+HIF
Sbjct: 731 VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIF 910
Query: 230 RGQPRRHLLQSGWSVFVSAKRLGAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSH 409
RGQPRRHLL +GWS FV++KRL AGD F+FLRG++GELRVGVRRA QQ+++PSSVISSH
Sbjct: 911 RGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISSH 1090
Query: 410 SMHLGVLATAWHAVNTGTMFTVYYKPRTS 496
SMHLGVLATA HA T TMF VYYKPRTS
Sbjct: 1091 SMHLGVLATARHATQTKTMFIVYYKPRTS 1177
Score = 123 bits (263), Expect(4) = 4e-040
Identities = 59/105 (56%), Positives = 69/105 (65%)
Frame = -2 / -1
Query: 495 LVLGL**TVNMVPVLTACHAVARTPRCMLWLDITEDGTFACCLMARLTPTRSSPLSPLRK 316
LVLGL* T+N+V V A AVA TPRC+L LDIT++G C +ARLTPTR+SP SPLR
Sbjct: 1176 LVLGL*YTMNIVFV*VAWRAVASTPRCIL*LDITDEGILLC*RLARLTPTRNSPFSPLRN 997
Query: 315 MKASPAPRRLALTKTLQPLCKRCLRG*PLNMWRKRHSTPCRSLAT 181
K SPA +TK L P+ RCLRG PL + H PC S AT
Sbjct: 996 TKVSPATNLFDVTKVLHPVVNRCLRGWPLKICLNFH**PCTSSAT 862
Score = 119 bits (255), Expect = 1e-025
Identities = 62/157 (39%), Positives = 90/157 (57%)
Frame = -1 / -3
Query: 493 CPRLVVDSKHGPSVNSMPCCSKNTKMHAVA*YY*RWNICLLPHGTPDSYTKLPTITS*KD 314
CP +V ++H ++SM C SK+++MH + *Y + LL T DS ++L + S +
Sbjct: 1174 CPWFIVYNEHSFRLSSMACSSKHSQMHTMT*YNG*RHTALLKISTSDSNSQLSVLPSQEY 995
Query: 313 EGISSTKTLGTNKNTPATLQKMPSWLTSEYVAKAPFHTMQVLGYKLLCWRLTGHIQWRKT 134
+G+ S ++L NK P Q MP WL S+ + + P T+ + GY LL L HIQ RKT
Sbjct: 994 KGVPSNQSL*CNKGAPPCRQ*MPPWLASKNMLEFPLITVHIFGY*LLGRGLLSHIQRRKT 815
Query: 133 LICMAPQHRESTMSAGIRGCQCLAEGVHAWPCKCSRR 23
M P +R++TM A IR CQ LAE V+ P + RR
Sbjct: 814 FRGMFP*NRKATMGACIRRCQNLAERVNFRPLQLRRR 704
Score = 69.8 bits (146), Expect(4) = e-101
Identities = 26/51 (50%), Positives = 35/51 (68%)
Frame = +3 / +2
Query: 657 WAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPPPINPLPVHRPKRPR 809
W +SKWR L+V WDE +SI RP +VSPW+IEP V+ + + + KRPR
Sbjct: 1328 WKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVNSENVPKSVMLKNKRPR 1480
Score = 43.2 bits (88), Expect(4) = 4e-040
Identities = 20/49 (40%), Positives = 24/49 (48%)
Frame = -3 / -2
Query: 155 SYPVAEDTHLHGAAAPRIHHECWYQRLSMSCRRSARVALQVQQEVKQAS 9
SYP ED H + + HH C YQ LS C +S A Q+E Q S
Sbjct: 836 SYPAEEDIPWHVSLEQKSHHGCLYQTLSKPC*KSELSAFATQEERDQDS 690
Score = 40.5 bits (82), Expect(4) = e-101
Identities = 11/29 (37%), Positives = 23/29 (79%)
Frame = +1 / +2
Query: 502 AEFVVPCDRYMESLKRNYPIGMRFKMRFK 588
++F++ ++Y+E++ + +GMRFKMRF+
Sbjct: 1175 SQFIISLNKYLEAMSNKFSVGMRFKMRFE 1261
Score = 33.1 bits (66), Expect(4) = 4e-040
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2 / -3
Query: 594 LHLKPHFKSHPYRVISFQ*FHIAITGNNKLS 502
L LK H KSHPYR + F I + N++L+
Sbjct: 1267 LSLKTHLKSHPYRELIAHGF*IFVQANDELA 1175
Score = 30.4 bits (60), Expect(4) = e-101
Identities = 9/18 (50%), Positives = 16/18 (88%)
Frame = +3 / +2
Query: 588 GEEAPEQRFTGTIVGNVD 641
GE++PE+R++GT++G D
Sbjct: 1262 GEDSPERRYSGTVIGVKD 1315
Score = 24.0 bits (46), Expect(4) = 4e-040
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1 / -1
Query: 736 GETLSGRGMEEASSHLTLR*RHLDS 662
GETL G ++ SS T + RH +S
Sbjct: 1407 GETLLGLEIDAGSSQ*TSKHRHFES 1333
>ref|NM_118530.3| Arabidopsis thaliana ARF9 (AUXIN RESPONSE FACTOR 9); transcription
factor AT4G23980 (ARF9) transcript variant AT4G23980.1
mRNA, complete cds
Length = 2479
Score = 291 bits (629), Expect(4) = e-101
Identities = 117/149 (78%), Positives = 133/149 (89%)
Frame = +2 / +2
Query: 50 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIF 229
VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDMT+Q PTQELVA+D+HG +W+F+HIF
Sbjct: 632 VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIF 811
Query: 230 RGQPRRHLLQSGWSVFVSAKRLGAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSH 409
RGQPRRHLL +GWS FV++KRL AGD F+FLRG++GELRVGVRRA QQ+++PSSVISSH
Sbjct: 812 RGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISSH 991
Query: 410 SMHLGVLATAWHAVNTGTMFTVYYKPRTS 496
SMHLGVLATA HA T TMF VYYKPRTS
Sbjct: 992 SMHLGVLATARHATQTKTMFIVYYKPRTS 1078
Score = 123 bits (263), Expect(4) = 4e-040
Identities = 59/105 (56%), Positives = 69/105 (65%)
Frame = -2 / -2
Query: 495 LVLGL**TVNMVPVLTACHAVARTPRCMLWLDITEDGTFACCLMARLTPTRSSPLSPLRK 316
LVLGL* T+N+V V A AVA TPRC+L LDIT++G C +ARLTPTR+SP SPLR
Sbjct: 1077 LVLGL*YTMNIVFV*VAWRAVASTPRCIL*LDITDEGILLC*RLARLTPTRNSPFSPLRN 898
Query: 315 MKASPAPRRLALTKTLQPLCKRCLRG*PLNMWRKRHSTPCRSLAT 181
K SPA +TK L P+ RCLRG PL + H PC S AT
Sbjct: 897 TKVSPATNLFDVTKVLHPVVNRCLRGWPLKICLNFH**PCTSSAT 763
Score = 119 bits (255), Expect = 1e-025
Identities = 62/157 (39%), Positives = 90/157 (57%)
Frame = -1 / -1
Query: 493 CPRLVVDSKHGPSVNSMPCCSKNTKMHAVA*YY*RWNICLLPHGTPDSYTKLPTITS*KD 314
CP +V ++H ++SM C SK+++MH + *Y + LL T DS ++L + S +
Sbjct: 1075 CPWFIVYNEHSFRLSSMACSSKHSQMHTMT*YNG*RHTALLKISTSDSNSQLSVLPSQEY 896
Query: 313 EGISSTKTLGTNKNTPATLQKMPSWLTSEYVAKAPFHTMQVLGYKLLCWRLTGHIQWRKT 134
+G+ S ++L NK P Q MP WL S+ + + P T+ + GY LL L HIQ RKT
Sbjct: 895 KGVPSNQSL*CNKGAPPCRQ*MPPWLASKNMLEFPLITVHIFGY*LLGRGLLSHIQRRKT 716
Query: 133 LICMAPQHRESTMSAGIRGCQCLAEGVHAWPCKCSRR 23
M P +R++TM A IR CQ LAE V+ P + RR
Sbjct: 715 FRGMFP*NRKATMGACIRRCQNLAERVNFRPLQLRRR 605
Score = 69.8 bits (146), Expect(4) = e-101
Identities = 26/51 (50%), Positives = 35/51 (68%)
Frame = +3 / +2
Query: 657 WAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPPPINPLPVHRPKRPR 809
W +SKWR L+V WDE +SI RP +VSPW+IEP V+ + + + KRPR
Sbjct: 1229 WKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVNSENVPKSVMLKNKRPR 1381
Score = 43.2 bits (88), Expect(4) = 4e-040
Identities = 20/49 (40%), Positives = 24/49 (48%)
Frame = -3 / -3
Query: 155 SYPVAEDTHLHGAAAPRIHHECWYQRLSMSCRRSARVALQVQQEVKQAS 9
SYP ED H + + HH C YQ LS C +S A Q+E Q S
Sbjct: 737 SYPAEEDIPWHVSLEQKSHHGCLYQTLSKPC*KSELSAFATQEERDQDS 591
Score = 40.5 bits (82), Expect(4) = e-101
Identities = 11/29 (37%), Positives = 23/29 (79%)
Frame = +1 / +2
Query: 502 AEFVVPCDRYMESLKRNYPIGMRFKMRFK 588
++F++ ++Y+E++ + +GMRFKMRF+
Sbjct: 1076 SQFIISLNKYLEAMSNKFSVGMRFKMRFE 1162
Score = 33.1 bits (66), Expect(4) = 4e-040
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2 / -1
Query: 594 LHLKPHFKSHPYRVISFQ*FHIAITGNNKLS 502
L LK H KSHPYR + F I + N++L+
Sbjct: 1168 LSLKTHLKSHPYRELIAHGF*IFVQANDELA 1076
Score = 30.4 bits (60), Expect(4) = e-101
Identities = 9/18 (50%), Positives = 16/18 (88%)
Frame = +3 / +2
Query: 588 GEEAPEQRFTGTIVGNVD 641
GE++PE+R++GT++G D
Sbjct: 1163 GEDSPERRYSGTVIGVKD 1216
Score = 24.0 bits (46), Expect(4) = 4e-040
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1 / -2
Query: 736 GETLSGRGMEEASSHLTLR*RHLDS 662
GETL G ++ SS T + RH +S
Sbjct: 1308 GETLLGLEIDAGSSQ*TSKHRHFES 1234
>emb|BX828437.1|CNS0A2BW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH8ZD05 of Hormone Treated Callus of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 2473
Score = 291 bits (629), Expect(4) = e-101
Identities = 117/149 (78%), Positives = 133/149 (89%)
Frame = +2 / +2
Query: 50 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIF 229
VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDMT+Q PTQELVA+D+HG +W+F+HIF
Sbjct: 632 VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIF 811
Query: 230 RGQPRRHLLQSGWSVFVSAKRLGAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSH 409
RGQPRRHLL +GWS FV++KRL AGD F+FLRG++GELRVGVRRA QQ+++PSSVISSH
Sbjct: 812 RGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISSH 991
Query: 410 SMHLGVLATAWHAVNTGTMFTVYYKPRTS 496
SMHLGVLATA HA T TMF VYYKPRTS
Sbjct: 992 SMHLGVLATARHATQTKTMFIVYYKPRTS 1078
Score = 123 bits (263), Expect(4) = 4e-040
Identities = 59/105 (56%), Positives = 69/105 (65%)
Frame = -2 / -2
Query: 495 LVLGL**TVNMVPVLTACHAVARTPRCMLWLDITEDGTFACCLMARLTPTRSSPLSPLRK 316
LVLGL* T+N+V V A AVA TPRC+L LDIT++G C +ARLTPTR+SP SPLR
Sbjct: 1077 LVLGL*YTMNIVFV*VAWRAVASTPRCIL*LDITDEGILLC*RLARLTPTRNSPFSPLRN 898
Query: 315 MKASPAPRRLALTKTLQPLCKRCLRG*PLNMWRKRHSTPCRSLAT 181
K SPA +TK L P+ RCLRG PL + H PC S AT
Sbjct: 897 TKVSPATNLFDVTKVLHPVVNRCLRGWPLKICLNFH**PCTSSAT 763
Score = 119 bits (255), Expect = 1e-025
Identities = 62/157 (39%), Positives = 90/157 (57%)
Frame = -1 / -1
Query: 493 CPRLVVDSKHGPSVNSMPCCSKNTKMHAVA*YY*RWNICLLPHGTPDSYTKLPTITS*KD 314
CP +V ++H ++SM C SK+++MH + *Y + LL T DS ++L + S +
Sbjct: 1075 CPWFIVYNEHSFRLSSMACSSKHSQMHTMT*YNG*RHTALLKISTSDSNSQLSVLPSQEY 896
Query: 313 EGISSTKTLGTNKNTPATLQKMPSWLTSEYVAKAPFHTMQVLGYKLLCWRLTGHIQWRKT 134
+G+ S ++L NK P Q MP WL S+ + + P T+ + GY LL L HIQ RKT
Sbjct: 895 KGVPSNQSL*CNKGAPPCRQ*MPPWLASKNMLEFPLITVHIFGY*LLGRGLLSHIQRRKT 716
Query: 133 LICMAPQHRESTMSAGIRGCQCLAEGVHAWPCKCSRR 23
M P +R++TM A IR CQ LAE V+ P + RR
Sbjct: 715 FRGMFP*NRKATMGACIRRCQNLAERVNFRPLQLRRR 605
Score = 69.8 bits (146), Expect(4) = e-101
Identities = 26/51 (50%), Positives = 35/51 (68%)
Frame = +3 / +2
Query: 657 WAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPPPINPLPVHRPKRPR 809
W +SKWR L+V WDE +SI RP +VSPW+IEP V+ + + + KRPR
Sbjct: 1229 WKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVNSENVPKSVMLKNKRPR 1381
Score = 43.2 bits (88), Expect(4) = 4e-040
Identities = 20/49 (40%), Positives = 24/49 (48%)
Frame = -3 / -3
Query: 155 SYPVAEDTHLHGAAAPRIHHECWYQRLSMSCRRSARVALQVQQEVKQAS 9
SYP ED H + + HH C YQ LS C +S A Q+E Q S
Sbjct: 737 SYPAEEDIPWHVSLEQKSHHGCLYQTLSKPC*KSELSAFATQEERDQDS 591
Score = 40.5 bits (82), Expect(4) = e-101
Identities = 11/29 (37%), Positives = 23/29 (79%)
Frame = +1 / +2
Query: 502 AEFVVPCDRYMESLKRNYPIGMRFKMRFK 588
++F++ ++Y+E++ + +GMRFKMRF+
Sbjct: 1076 SQFIISLNKYLEAMSNKFSVGMRFKMRFE 1162
Score = 33.1 bits (66), Expect(4) = 4e-040
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2 / -1
Query: 594 LHLKPHFKSHPYRVISFQ*FHIAITGNNKLS 502
L LK H KSHPYR + F I + N++L+
Sbjct: 1168 LSLKTHLKSHPYRELIAHGF*IFVQANDELA 1076
Score = 30.4 bits (60), Expect(4) = e-101
Identities = 9/18 (50%), Positives = 16/18 (88%)
Frame = +3 / +2
Query: 588 GEEAPEQRFTGTIVGNVD 641
GE++PE+R++GT++G D
Sbjct: 1163 GEDSPERRYSGTVIGVKD 1216
Score = 24.0 bits (46), Expect(4) = 4e-040
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1 / -2
Query: 736 GETLSGRGMEEASSHLTLR*RHLDS 662
GETL G ++ SS T + RH +S
Sbjct: 1308 GETLLGLEIDAGSSQ*TSKHRHFES 1234
>gb|AF082176.1|AF082176 Arabidopsis thaliana auxin response factor 9 (ARF9) mRNA, complete
cds
Length = 2292
Score = 291 bits (629), Expect(4) = e-101
Identities = 117/149 (78%), Positives = 133/149 (89%)
Frame = +2 / +3
Query: 50 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIF 229
VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDMT+Q PTQELVA+D+HG +W+F+HIF
Sbjct: 624 VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIF 803
Query: 230 RGQPRRHLLQSGWSVFVSAKRLGAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSH 409
RGQPRRHLL +GWS FV++KRL AGD F+FLRG++GELRVGVRRA QQ+++PSSVISSH
Sbjct: 804 RGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISSH 983
Query: 410 SMHLGVLATAWHAVNTGTMFTVYYKPRTS 496
SMHLGVLATA HA T TMF VYYKPRTS
Sbjct: 984 SMHLGVLATARHATQTKTMFIVYYKPRTS 1070
Score = 123 bits (263), Expect(4) = 4e-040
Identities = 59/105 (56%), Positives = 69/105 (65%)
Frame = -2 / -3
Query: 495 LVLGL**TVNMVPVLTACHAVARTPRCMLWLDITEDGTFACCLMARLTPTRSSPLSPLRK 316
LVLGL* T+N+V V A AVA TPRC+L LDIT++G C +ARLTPTR+SP SPLR
Sbjct: 1069 LVLGL*YTMNIVFV*VAWRAVASTPRCIL*LDITDEGILLC*RLARLTPTRNSPFSPLRN 890
Query: 315 MKASPAPRRLALTKTLQPLCKRCLRG*PLNMWRKRHSTPCRSLAT 181
K SPA +TK L P+ RCLRG PL + H PC S AT
Sbjct: 889 TKVSPATNLFDVTKVLHPVVNRCLRGWPLKICLNFH**PCTSSAT 755
Score = 119 bits (255), Expect = 1e-025
Identities = 62/157 (39%), Positives = 90/157 (57%)
Frame = -1 / -2
Query: 493 CPRLVVDSKHGPSVNSMPCCSKNTKMHAVA*YY*RWNICLLPHGTPDSYTKLPTITS*KD 314
CP +V ++H ++SM C SK+++MH + *Y + LL T DS ++L + S +
Sbjct: 1067 CPWFIVYNEHSFRLSSMACSSKHSQMHTMT*YNG*RHTALLKISTSDSNSQLSVLPSQEY 888
Query: 313 EGISSTKTLGTNKNTPATLQKMPSWLTSEYVAKAPFHTMQVLGYKLLCWRLTGHIQWRKT 134
+G+ S ++L NK P Q MP WL S+ + + P T+ + GY LL L HIQ RKT
Sbjct: 887 KGVPSNQSL*CNKGAPPCRQ*MPPWLASKNMLEFPLITVHIFGY*LLGRGLLSHIQRRKT 708
Query: 133 LICMAPQHRESTMSAGIRGCQCLAEGVHAWPCKCSRR 23
M P +R++TM A IR CQ LAE V+ P + RR
Sbjct: 707 FRGMFP*NRKATMGACIRRCQNLAERVNFRPLQLRRR 597
Score = 69.8 bits (146), Expect(4) = e-101
Identities = 26/51 (50%), Positives = 35/51 (68%)
Frame = +3 / +3
Query: 657 WAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPPPINPLPVHRPKRPR 809
W +SKWR L+V WDE +SI RP +VSPW+IEP V+ + + + KRPR
Sbjct: 1221 WKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVNSENVPKSVMLKNKRPR 1373
Score = 43.2 bits (88), Expect(4) = 4e-040
Identities = 20/49 (40%), Positives = 24/49 (48%)
Frame = -3 / -1
Query: 155 SYPVAEDTHLHGAAAPRIHHECWYQRLSMSCRRSARVALQVQQEVKQAS 9
SYP ED H + + HH C YQ LS C +S A Q+E Q S
Sbjct: 729 SYPAEEDIPWHVSLEQKSHHGCLYQTLSKPC*KSELSAFATQEERDQDS 583
Score = 40.5 bits (82), Expect(4) = e-101
Identities = 11/29 (37%), Positives = 23/29 (79%)
Frame = +1 / +3
Query: 502 AEFVVPCDRYMESLKRNYPIGMRFKMRFK 588
++F++ ++Y+E++ + +GMRFKMRF+
Sbjct: 1068 SQFIISLNKYLEAMSNKFSVGMRFKMRFE 1154
Score = 33.1 bits (66), Expect(4) = 4e-040
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2 / -2
Query: 594 LHLKPHFKSHPYRVISFQ*FHIAITGNNKLS 502
L LK H KSHPYR + F I + N++L+
Sbjct: 1160 LSLKTHLKSHPYRELIAHGF*IFVQANDELA 1068
Score = 30.4 bits (60), Expect(4) = e-101
Identities = 9/18 (50%), Positives = 16/18 (88%)
Frame = +3 / +3
Query: 588 GEEAPEQRFTGTIVGNVD 641
GE++PE+R++GT++G D
Sbjct: 1155 GEDSPERRYSGTVIGVKD 1208
Score = 24.0 bits (46), Expect(4) = 4e-040
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1 / -3
Query: 736 GETLSGRGMEEASSHLTLR*RHLDS 662
GETL G ++ SS T + RH +S
Sbjct: 1300 GETLLGLEIDAGSSQ*TSKHRHFES 1226
>gb|AF344312.1| Arabidopsis thaliana clone C00029 (e) auxin response factor 9
(At4g23980) mRNA, complete cds
Length = 1917
Score = 291 bits (629), Expect(4) = e-101
Identities = 117/149 (78%), Positives = 133/149 (89%)
Frame = +2 / +1
Query: 50 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIF 229
VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDMT+Q PTQELVA+D+HG +W+F+HIF
Sbjct: 337 VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIF 516
Query: 230 RGQPRRHLLQSGWSVFVSAKRLGAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSH 409
RGQPRRHLL +GWS FV++KRL AGD F+FLRG++GELRVGVRRA QQ+++PSSVISSH
Sbjct: 517 RGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISSH 696
Query: 410 SMHLGVLATAWHAVNTGTMFTVYYKPRTS 496
SMHLGVLATA HA T TMF VYYKPRTS
Sbjct: 697 SMHLGVLATARHATQTKTMFIVYYKPRTS 783
Score = 123 bits (263), Expect(4) = 4e-040
Identities = 59/105 (56%), Positives = 69/105 (65%)
Frame = -2 / -2
Query: 495 LVLGL**TVNMVPVLTACHAVARTPRCMLWLDITEDGTFACCLMARLTPTRSSPLSPLRK 316
LVLGL* T+N+V V A AVA TPRC+L LDIT++G C +ARLTPTR+SP SPLR
Sbjct: 782 LVLGL*YTMNIVFV*VAWRAVASTPRCIL*LDITDEGILLC*RLARLTPTRNSPFSPLRN 603
Query: 315 MKASPAPRRLALTKTLQPLCKRCLRG*PLNMWRKRHSTPCRSLAT 181
K SPA +TK L P+ RCLRG PL + H PC S AT
Sbjct: 602 TKVSPATNLFDVTKVLHPVVNRCLRGWPLKICLNFH**PCTSSAT 468
Score = 119 bits (255), Expect = 1e-025
Identities = 62/157 (39%), Positives = 90/157 (57%)
Frame = -1 / -1
Query: 493 CPRLVVDSKHGPSVNSMPCCSKNTKMHAVA*YY*RWNICLLPHGTPDSYTKLPTITS*KD 314
CP +V ++H ++SM C SK+++MH + *Y + LL T DS ++L + S +
Sbjct: 780 CPWFIVYNEHSFRLSSMACSSKHSQMHTMT*YNG*RHTALLKISTSDSNSQLSVLPSQEY 601
Query: 313 EGISSTKTLGTNKNTPATLQKMPSWLTSEYVAKAPFHTMQVLGYKLLCWRLTGHIQWRKT 134
+G+ S ++L NK P Q MP WL S+ + + P T+ + GY LL L HIQ RKT
Sbjct: 600 KGVPSNQSL*CNKGAPPCRQ*MPPWLASKNMLEFPLITVHIFGY*LLGRGLLSHIQRRKT 421
Query: 133 LICMAPQHRESTMSAGIRGCQCLAEGVHAWPCKCSRR 23
M P +R++TM A IR CQ LAE V+ P + RR
Sbjct: 420 FRGMFP*NRKATMGACIRRCQNLAERVNFRPLQLRRR 310
Score = 69.8 bits (146), Expect(4) = e-101
Identities = 26/51 (50%), Positives = 35/51 (68%)
Frame = +3 / +1
Query: 657 WAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPPPINPLPVHRPKRPR 809
W +SKWR L+V WDE +SI RP +VSPW+IEP V+ + + + KRPR
Sbjct: 934 WKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVNSENVPKSVMLKNKRPR 1086
Score = 43.2 bits (88), Expect(4) = 4e-040
Identities = 20/49 (40%), Positives = 24/49 (48%)
Frame = -3 / -3
Query: 155 SYPVAEDTHLHGAAAPRIHHECWYQRLSMSCRRSARVALQVQQEVKQAS 9
SYP ED H + + HH C YQ LS C +S A Q+E Q S
Sbjct: 442 SYPAEEDIPWHVSLEQKSHHGCLYQTLSKPC*KSELSAFATQEERDQDS 296
Score = 40.5 bits (82), Expect(4) = e-101
Identities = 11/29 (37%), Positives = 23/29 (79%)
Frame = +1 / +1
Query: 502 AEFVVPCDRYMESLKRNYPIGMRFKMRFK 588
++F++ ++Y+E++ + +GMRFKMRF+
Sbjct: 781 SQFIISLNKYLEAMSNKFSVGMRFKMRFE 867
Score = 33.1 bits (66), Expect(4) = 4e-040
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2 / -1
Query: 594 LHLKPHFKSHPYRVISFQ*FHIAITGNNKLS 502
L LK H KSHPYR + F I + N++L+
Sbjct: 873 LSLKTHLKSHPYRELIAHGF*IFVQANDELA 781
Score = 30.4 bits (60), Expect(4) = e-101
Identities = 9/18 (50%), Positives = 16/18 (88%)
Frame = +3 / +1
Query: 588 GEEAPEQRFTGTIVGNVD 641
GE++PE+R++GT++G D
Sbjct: 868 GEDSPERRYSGTVIGVKD 921
Score = 24.0 bits (46), Expect(4) = 4e-040
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1 / -2
Query: 736 GETLSGRGMEEASSHLTLR*RHLDS 662
GETL G ++ SS T + RH +S
Sbjct: 1013 GETLLGLEIDAGSSQ*TSKHRHFES 939
>gb|BT015544.1| Arabidopsis thaliana At4g23980 mRNA sequence
Length = 1909
Score = 175 bits (376), Expect(5) = 6e-097
Identities = 68/90 (75%), Positives = 78/90 (86%)
Frame = +2 / +1
Query: 50 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIF 229
VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDMT+Q PTQELVA+D+HG +W+F+HIF
Sbjct: 334 VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIF 513
Query: 230 RGQPRRHLLQSGWSVFVSAKRLGAGDAFIF 319
RGQPRRHLL +GWS FV++KRL AG F
Sbjct: 514 RGQPRRHLLTTGWSTFVTSKRLVAGRHLCF 603
Score = 118 bits (252), Expect(5) = 6e-097
Identities = 50/65 (76%), Positives = 56/65 (86%)
Frame = +2 / +2
Query: 302 GDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSHSMHLGVLATAWHAVNTGTMFTVYY 481
GD F+FLR ++GELRVGVRRA QQ+++PSSVISSHSMHLGVLATA HA T TMF VYY
Sbjct: 587 GDTFVFLREENGELRVGVRRANLQQSSMPSSVISSHSMHLGVLATARHATQTKTMFIVYY 766
Query: 482 KPRTS 496
KPRTS
Sbjct: 767 KPRTS 781
Score = 89.5 bits (189), Expect(4) = 4e-030
Identities = 44/78 (56%), Positives = 53/78 (67%)
Frame = -2 / -2
Query: 495 LVLGL**TVNMVPVLTACHAVARTPRCMLWLDITEDGTFACCLMARLTPTRSSPLSPLRK 316
LVLGL* T+N+V V A AVA TPRC+L LDIT++G C +ARLTPTR+SP S LRK
Sbjct: 780 LVLGL*YTMNIVFV*VAWRAVASTPRCIL*LDITDEGILLC*RLARLTPTRNSPFSSLRK 601
Query: 315 MKASPAPRRLALTKTLQP 262
K SP+ + L K P
Sbjct: 600 TKVSPSNQSL*CNKGAPP 547
Score = 78.5 bits (165), Expect(2) = 2e-021
Identities = 41/93 (44%), Positives = 53/93 (56%)
Frame = -1 / -2
Query: 301 STKTLGTNKNTPATLQKMPSWLTSEYVAKAPFHTMQVLGYKLLCWRLTGHIQWRKTLICM 122
S ++L NK P Q MP WL S+ + + P T+ + GY LL L HIQ RKT M
Sbjct: 585 SNQSL*CNKGAPPCRQ*MPPWLASKNMLEFPLITVHIFGY*LLGRGLLSHIQRRKTFRGM 406
Query: 121 APQHRESTMSAGIRGCQCLAEGVHAWPCKCSRR 23
P +R++TM A IR CQ LAE V+ P + RR
Sbjct: 405 FP*NRKATMGACIRRCQNLAERVNFRPLQLRRR 307
Score = 69.8 bits (146), Expect(5) = 6e-097
Identities = 26/51 (50%), Positives = 35/51 (68%)
Frame = +3 / +2
Query: 657 WAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPPPINPLPVHRPKRPR 809
W +SKWR L+V WDE +SI RP +VSPW+IEP V+ + + + KRPR
Sbjct: 932 WKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVNSENVPKSVMLKNKRPR 1084
Score = 46.9 bits (96), Expect(2) = 2e-021
Identities = 21/64 (32%), Positives = 39/64 (60%)
Frame = -1 / -1
Query: 493 CPRLVVDSKHGPSVNSMPCCSKNTKMHAVA*YY*RWNICLLPHGTPDSYTKLPTITS*KD 314
CP +V ++H ++SM C SK+++MH + *Y + LL T DS ++L + S ++
Sbjct: 778 CPWFIVYNEHSFRLSSMACSSKHSQMHTMT*YNG*RHTALLKISTSDSNSQLSVLLSQEN 599
Query: 313 EGIS 302
+G++
Sbjct: 598 KGVA 587
Score = 43.2 bits (88), Expect(4) = 4e-030
Identities = 20/49 (40%), Positives = 24/49 (48%)
Frame = -3 / -1
Query: 155 SYPVAEDTHLHGAAAPRIHHECWYQRLSMSCRRSARVALQVQQEVKQAS 9
SYP ED H + + HH C YQ LS C +S A Q+E Q S
Sbjct: 439 SYPAEEDIPWHVSLEQKSHHGCLYQTLSKPC*KSELSAFATQEERDQDS 293
Score = 40.5 bits (82), Expect(5) = 6e-097
Identities = 11/29 (37%), Positives = 23/29 (79%)
Frame = +1 / +2
Query: 502 AEFVVPCDRYMESLKRNYPIGMRFKMRFK 588
++F++ ++Y+E++ + +GMRFKMRF+
Sbjct: 779 SQFIISLNKYLEAMSNKFSVGMRFKMRFE 865
Score = 33.1 bits (66), Expect(4) = 4e-030
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2 / -1
Query: 594 LHLKPHFKSHPYRVISFQ*FHIAITGNNKLS 502
L LK H KSHPYR + F I + N++L+
Sbjct: 871 LSLKTHLKSHPYRELIAHGF*IFVQANDELA 779
Score = 30.4 bits (60), Expect(5) = 6e-097
Identities = 9/18 (50%), Positives = 16/18 (88%)
Frame = +3 / +2
Query: 588 GEEAPEQRFTGTIVGNVD 641
GE++PE+R++GT++G D
Sbjct: 866 GEDSPERRYSGTVIGVKD 919
Score = 24.0 bits (46), Expect(4) = 4e-030
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1 / -2
Query: 736 GETLSGRGMEEASSHLTLR*RHLDS 662
GETL G ++ SS T + RH +S
Sbjct: 1011 GETLLGLEIDAGSSQ*TSKHRHFES 937
>ref|NM_116048.2| Arabidopsis thaliana ARF18; transcription factor AT3G61830 (ARF18)
mRNA, complete cds
Length = 2347
Score = 276 bits (597), Expect(4) = 1e-096
Identities = 112/148 (75%), Positives = 127/148 (85%)
Frame = +2 / +1
Query: 53 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFR 232
HSF K LTASDTSTHGGFSVLR+HA ECLP LDMT+ PTQELV +DLHG EWRF+HIFR
Sbjct: 658 HSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQATPTQELVTRDLHGFEWRFKHIFR 837
Query: 233 GQPRRHLLQSGWSVFVSAKRLGAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSHS 412
GQPRRHLL +GWS FVS+KRL AGDAF+FLRG++G+LRVGVRR R Q+ +P+SVISS S
Sbjct: 838 GQPRRHLLTTGWSTFVSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPTSVISSQS 1017
Query: 413 MHLGVLATAWHAVNTGTMFTVYYKPRTS 496
MHLGVLATA HAV T T+F V+YKPR S
Sbjct: 1018 MHLGVLATASHAVRTTTIFVVFYKPRIS 1101
Score = 121 bits (258), Expect(4) = 2e-036
Identities = 59/105 (56%), Positives = 67/105 (63%)
Frame = -2 / -3
Query: 495 LVLGL**TVNMVPVLTACHAVARTPRCMLWLDITEDGTFACCLMARLTPTRSSPLSPLRK 316
L+LGL* T +V V TA AVARTP+CML L+ITE G C RLTPTR SP SPL+
Sbjct: 1100 LILGL*KTTKIVVVRTA*EAVARTPKCML*LEITEVGIVL*CRANRLTPTRKSPFSPLKN 921
Query: 315 MKASPAPRRLALTKTLQPLCKRCLRG*PLNMWRKRHSTPCRSLAT 181
KASPA T LQP+ +CLRG PLN+ HS P RSL T
Sbjct: 920 TKASPATSLFEDTNVLQPVVSKCLRGCPLNICLNLHSKP*RSLVT 786
Score = 112 bits (240), Expect = 2e-023
Identities = 57/158 (36%), Positives = 85/158 (53%)
Frame = +1 / +3
Query: 22 TSCCTCKATRALLLQDIDSL*YQHSWWILGAAAPCR*VSSATGYDPSTSNTRACSQGPAW 201
T C T A + + D + Y+HSWWIL ++ *+ + GYD S S +R C +W
Sbjct: 627 TYCWTN*ARVSFVC*DFNGFRYKHSWWILCSS*TRH*MLAFFGYDTSYSYSRTCD*RSSW 806
Query: 202 CGMALSPHIQRSTTKASFAEWLECFC*CQASWCWRCLHLSKR**WGASCRSQACHEAASK 381
M + +IQR+TT+A LE C + + WRC + + * WG + S+ A+
Sbjct: 807 L*MEV*AYIQRTTTEAFAYYGLEYICILEKTCSWRCFCVLEG*EWGFTGWSETISSASKH 986
Query: 382 CSIFSNIKPQHASWCSCYSMACC*HWDHVYCLLQA*DK 495
+ F K +HA SCYS +CC + +++ CLLQA*DK
Sbjct: 987 NAYFGYFKSEHAFGSSCYSFSCCAYNNNLCCLLQA*DK 1100
Score = 65.7 bits (137), Expect(4) = 1e-096
Identities = 21/40 (52%), Positives = 32/40 (80%)
Frame = +3 / +1
Query: 657 WAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPPPIN 776
W SKWR L+V+WDE +++ RP++VSPW+IEP ++ PI+
Sbjct: 1252 WPASKWRSLQVQWDEPTTVQRPDKVSPWEIEPFLATSPIS 1371
Score = 39.6 bits (80), Expect(4) = 1e-096
Identities = 12/29 (41%), Positives = 23/29 (79%)
Frame = +1 / +1
Query: 502 AEFVVPCDRYMESLKRNYPIGMRFKMRFK 588
++F+V ++YME++K + +G RF+MRF+
Sbjct: 1099 SQFIVGVNKYMEAIKHGFSLGTRFRMRFE 1185
Score = 37.3 bits (75), Expect(4) = 2e-036
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = -2 / -3
Query: 117 RSTENPP*VLVSEAVNVLQKE 55
R TENPP*VLVSEAV +L E
Sbjct: 722 RRTENPP*VLVSEAVKILTNE 660
Score = 33.6 bits (67), Expect(4) = 1e-096
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +3 / +1
Query: 588 GEEAPEQRFTGTIVGNVD 641
GEE+PE+ FTGTIVG+ D
Sbjct: 1186 GEESPERIFTGTIVGSGD 1239
Score = 28.1 bits (55), Expect(4) = 2e-036
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -1 / -3
Query: 736 GETLSGRGMEEASSHLTLR*RHLDSAH 656
GETLSG SSH T HL++ H
Sbjct: 1331 GETLSGL*TVVGSSHCTCNDLHLEAGH 1251
Score = 24.9 bits (48), Expect(4) = 2e-036
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -1 / -3
Query: 640 STFPTMVPVNLCSG 599
S PT+VPVN+ SG
Sbjct: 1238 SPLPTIVPVNILSG 1197
>gb|AY070463.1| Arabidopsis thaliana AT3g61830/F15G16_220 mRNA, complete cds
Length = 2331
Score = 276 bits (597), Expect(4) = 1e-096
Identities = 112/148 (75%), Positives = 127/148 (85%)
Frame = +2 / +1
Query: 53 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFR 232
HSF K LTASDTSTHGGFSVLR+HA ECLP LDMT+ PTQELV +DLHG EWRF+HIFR
Sbjct: 661 HSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQATPTQELVTRDLHGFEWRFKHIFR 840
Query: 233 GQPRRHLLQSGWSVFVSAKRLGAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSHS 412
GQPRRHLL +GWS FVS+KRL AGDAF+FLRG++G+LRVGVRR R Q+ +P+SVISS S
Sbjct: 841 GQPRRHLLTTGWSTFVSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPTSVISSQS 1020
Query: 413 MHLGVLATAWHAVNTGTMFTVYYKPRTS 496
MHLGVLATA HAV T T+F V+YKPR S
Sbjct: 1021 MHLGVLATASHAVRTTTIFVVFYKPRIS 1104
Score = 121 bits (258), Expect(4) = 2e-036
Identities = 59/105 (56%), Positives = 67/105 (63%)
Frame = -2 / -2
Query: 495 LVLGL**TVNMVPVLTACHAVARTPRCMLWLDITEDGTFACCLMARLTPTRSSPLSPLRK 316
L+LGL* T +V V TA AVARTP+CML L+ITE G C RLTPTR SP SPL+
Sbjct: 1103 LILGL*KTTKIVVVRTA*EAVARTPKCML*LEITEVGIVL*CRANRLTPTRKSPFSPLKN 924
Query: 315 MKASPAPRRLALTKTLQPLCKRCLRG*PLNMWRKRHSTPCRSLAT 181
KASPA T LQP+ +CLRG PLN+ HS P RSL T
Sbjct: 923 TKASPATSLFEDTNVLQPVVSKCLRGCPLNICLNLHSKP*RSLVT 789
Score = 112 bits (240), Expect = 2e-023
Identities = 57/158 (36%), Positives = 85/158 (53%)
Frame = +1 / +3
Query: 22 TSCCTCKATRALLLQDIDSL*YQHSWWILGAAAPCR*VSSATGYDPSTSNTRACSQGPAW 201
T C T A + + D + Y+HSWWIL ++ *+ + GYD S S +R C +W
Sbjct: 630 TYCWTN*ARVSFVC*DFNGFRYKHSWWILCSS*TRH*MLAFFGYDTSYSYSRTCD*RSSW 809
Query: 202 CGMALSPHIQRSTTKASFAEWLECFC*CQASWCWRCLHLSKR**WGASCRSQACHEAASK 381
M + +IQR+TT+A LE C + + WRC + + * WG + S+ A+
Sbjct: 810 L*MEV*AYIQRTTTEAFAYYGLEYICILEKTCSWRCFCVLEG*EWGFTGWSETISSASKH 989
Query: 382 CSIFSNIKPQHASWCSCYSMACC*HWDHVYCLLQA*DK 495
+ F K +HA SCYS +CC + +++ CLLQA*DK
Sbjct: 990 NAYFGYFKSEHAFGSSCYSFSCCAYNNNLCCLLQA*DK 1103
Score = 65.7 bits (137), Expect(4) = 1e-096
Identities = 21/40 (52%), Positives = 32/40 (80%)
Frame = +3 / +1
Query: 657 WAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPPPIN 776
W SKWR L+V+WDE +++ RP++VSPW+IEP ++ PI+
Sbjct: 1255 WPASKWRSLQVQWDEPTTVQRPDKVSPWEIEPFLATSPIS 1374
Score = 39.6 bits (80), Expect(4) = 1e-096
Identities = 12/29 (41%), Positives = 23/29 (79%)
Frame = +1 / +1
Query: 502 AEFVVPCDRYMESLKRNYPIGMRFKMRFK 588
++F+V ++YME++K + +G RF+MRF+
Sbjct: 1102 SQFIVGVNKYMEAIKHGFSLGTRFRMRFE 1188
Score = 37.3 bits (75), Expect(4) = 2e-036
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = -2 / -2
Query: 117 RSTENPP*VLVSEAVNVLQKE 55
R TENPP*VLVSEAV +L E
Sbjct: 725 RRTENPP*VLVSEAVKILTNE 663
Score = 33.6 bits (67), Expect(4) = 1e-096
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +3 / +1
Query: 588 GEEAPEQRFTGTIVGNVD 641
GEE+PE+ FTGTIVG+ D
Sbjct: 1189 GEESPERIFTGTIVGSGD 1242
Score = 28.1 bits (55), Expect(4) = 2e-036
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -1 / -2
Query: 736 GETLSGRGMEEASSHLTLR*RHLDSAH 656
GETLSG SSH T HL++ H
Sbjct: 1334 GETLSGL*TVVGSSHCTCNDLHLEAGH 1254
Score = 24.9 bits (48), Expect(4) = 2e-036
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -1 / -2
Query: 640 STFPTMVPVNLCSG 599
S PT+VPVN+ SG
Sbjct: 1241 SPLPTIVPVNILSG 1200
>gb|AY059746.1| Arabidopsis thaliana auxin response factor ARF18 (At3g61830) mRNA,
complete cds
Length = 2307
Score = 276 bits (597), Expect(4) = 1e-096
Identities = 112/148 (75%), Positives = 127/148 (85%)
Frame = +2 / +2
Query: 53 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFR 232
HSF K LTASDTSTHGGFSVLR+HA ECLP LDMT+ PTQELV +DLHG EWRF+HIFR
Sbjct: 596 HSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQATPTQELVTRDLHGFEWRFKHIFR 775
Query: 233 GQPRRHLLQSGWSVFVSAKRLGAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSHS 412
GQPRRHLL +GWS FVS+KRL AGDAF+FLRG++G+LRVGVRR R Q+ +P+SVISS S
Sbjct: 776 GQPRRHLLTTGWSTFVSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPTSVISSQS 955
Query: 413 MHLGVLATAWHAVNTGTMFTVYYKPRTS 496
MHLGVLATA HAV T T+F V+YKPR S
Sbjct: 956 MHLGVLATASHAVRTTTIFVVFYKPRIS 1039
Score = 121 bits (258), Expect(4) = 2e-036
Identities = 59/105 (56%), Positives = 67/105 (63%)
Frame = -2 / -1
Query: 495 LVLGL**TVNMVPVLTACHAVARTPRCMLWLDITEDGTFACCLMARLTPTRSSPLSPLRK 316
L+LGL* T +V V TA AVARTP+CML L+ITE G C RLTPTR SP SPL+
Sbjct: 1038 LILGL*KTTKIVVVRTA*EAVARTPKCML*LEITEVGIVL*CRANRLTPTRKSPFSPLKN 859
Query: 315 MKASPAPRRLALTKTLQPLCKRCLRG*PLNMWRKRHSTPCRSLAT 181
KASPA T LQP+ +CLRG PLN+ HS P RSL T
Sbjct: 858 TKASPATSLFEDTNVLQPVVSKCLRGCPLNICLNLHSKP*RSLVT 724
Score = 112 bits (240), Expect = 2e-023
Identities = 57/158 (36%), Positives = 85/158 (53%)
Frame = +1 / +1
Query: 22 TSCCTCKATRALLLQDIDSL*YQHSWWILGAAAPCR*VSSATGYDPSTSNTRACSQGPAW 201
T C T A + + D + Y+HSWWIL ++ *+ + GYD S S +R C +W
Sbjct: 565 TYCWTN*ARVSFVC*DFNGFRYKHSWWILCSS*TRH*MLAFFGYDTSYSYSRTCD*RSSW 744
Query: 202 CGMALSPHIQRSTTKASFAEWLECFC*CQASWCWRCLHLSKR**WGASCRSQACHEAASK 381
M + +IQR+TT+A LE C + + WRC + + * WG + S+ A+
Sbjct: 745 L*MEV*AYIQRTTTEAFAYYGLEYICILEKTCSWRCFCVLEG*EWGFTGWSETISSASKH 924
Query: 382 CSIFSNIKPQHASWCSCYSMACC*HWDHVYCLLQA*DK 495
+ F K +HA SCYS +CC + +++ CLLQA*DK
Sbjct: 925 NAYFGYFKSEHAFGSSCYSFSCCAYNNNLCCLLQA*DK 1038
Score = 65.7 bits (137), Expect(4) = 1e-096
Identities = 21/40 (52%), Positives = 32/40 (80%)
Frame = +3 / +2
Query: 657 WAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPPPIN 776
W SKWR L+V+WDE +++ RP++VSPW+IEP ++ PI+
Sbjct: 1190 WPASKWRSLQVQWDEPTTVQRPDKVSPWEIEPFLATSPIS 1309
Score = 39.6 bits (80), Expect(4) = 1e-096
Identities = 12/29 (41%), Positives = 23/29 (79%)
Frame = +1 / +2
Query: 502 AEFVVPCDRYMESLKRNYPIGMRFKMRFK 588
++F+V ++YME++K + +G RF+MRF+
Sbjct: 1037 SQFIVGVNKYMEAIKHGFSLGTRFRMRFE 1123
Score = 37.3 bits (75), Expect(4) = 2e-036
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = -2 / -1
Query: 117 RSTENPP*VLVSEAVNVLQKE 55
R TENPP*VLVSEAV +L E
Sbjct: 660 RRTENPP*VLVSEAVKILTNE 598
Score = 33.6 bits (67), Expect(4) = 1e-096
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +3 / +2
Query: 588 GEEAPEQRFTGTIVGNVD 641
GEE+PE+ FTGTIVG+ D
Sbjct: 1124 GEESPERIFTGTIVGSGD 1177
Score = 28.1 bits (55), Expect(4) = 2e-036
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -1 / -1
Query: 736 GETLSGRGMEEASSHLTLR*RHLDSAH 656
GETLSG SSH T HL++ H
Sbjct: 1269 GETLSGL*TVVGSSHCTCNDLHLEAGH 1189
Score = 24.9 bits (48), Expect(4) = 2e-036
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -1 / -1
Query: 640 STFPTMVPVNLCSG 599
S PT+VPVN+ SG
Sbjct: 1176 SPLPTIVPVNILSG 1135
>emb|BX823552.1|CNS0A4QR Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS50ZC04 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 2115
Score = 276 bits (597), Expect(4) = 1e-096
Identities = 112/148 (75%), Positives = 127/148 (85%)
Frame = +2 / +1
Query: 53 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFR 232
HSF K LTASDTSTHGGFSVLR+HA ECLP LDMT+ PTQELV +DLHG EWRF+HIFR
Sbjct: 493 HSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQATPTQELVTRDLHGFEWRFKHIFR 672
Query: 233 GQPRRHLLQSGWSVFVSAKRLGAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSHS 412
GQPRRHLL +GWS FVS+KRL AGDAF+FLRG++G+LRVGVRR R Q+ +P+SVISS S
Sbjct: 673 GQPRRHLLTTGWSTFVSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPTSVISSQS 852
Query: 413 MHLGVLATAWHAVNTGTMFTVYYKPRTS 496
MHLGVLATA HAV T T+F V+YKPR S
Sbjct: 853 MHLGVLATASHAVRTTTIFVVFYKPRIS 936
Score = 115 bits (245), Expect(4) = 1e-034
Identities = 57/105 (54%), Positives = 65/105 (61%)
Frame = -2 / -2
Query: 495 LVLGL**TVNMVPVLTACHAVARTPRCMLWLDITEDGTFACCLMARLTPTRSSPLSPLRK 316
L+LGL* T +V V TA AVA TP+CML L+ITE G C LTPTR SP SPL+
Sbjct: 935 LILGL*KTTKIVVVRTA*EAVASTPKCML*LEITEVGIVL*CRANLLTPTRKSPFSPLKN 756
Query: 315 MKASPAPRRLALTKTLQPLCKRCLRG*PLNMWRKRHSTPCRSLAT 181
KASPA T LQP+ +CLRG PLN+ HS P RSL T
Sbjct: 755 TKASPATSLFEDTNVLQPVVSKCLRGCPLNICLNLHSKP*RSLVT 621
Score = 111 bits (236), Expect = 6e-023
Identities = 56/158 (35%), Positives = 85/158 (53%)
Frame = +1 / +3
Query: 22 TSCCTCKATRALLLQDIDSL*YQHSWWILGAAAPCR*VSSATGYDPSTSNTRACSQGPAW 201
T C T A + + D + Y+HSWWIL ++ *+ + GYD S S +R C +W
Sbjct: 462 TYCWTN*ARVSFVC*DFNGFRYKHSWWILCSS*TRH*MLAFFGYDTSYSYSRTCD*RSSW 641
Query: 202 CGMALSPHIQRSTTKASFAEWLECFC*CQASWCWRCLHLSKR**WGASCRSQACHEAASK 381
M + +IQR+TT+A LE C + + WRC + + * WG + S+ A+
Sbjct: 642 L*MEV*AYIQRTTTEAFAYYGLEYICILEKTCSWRCFCVLEG*EWGFTGWSEKISSASKH 821
Query: 382 CSIFSNIKPQHASWCSCYSMACC*HWDHVYCLLQA*DK 495
+ F K +HA +CYS +CC + +++ CLLQA*DK
Sbjct: 822 NAYFGYFKSEHAFGSACYSFSCCAYNNNLCCLLQA*DK 935
Score = 65.7 bits (137), Expect(4) = 1e-096
Identities = 21/40 (52%), Positives = 32/40 (80%)
Frame = +3 / +1
Query: 657 WAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPPPIN 776
W SKWR L+V+WDE +++ RP++VSPW+IEP ++ PI+
Sbjct: 1087 WPASKWRSLQVQWDEPTTVQRPDKVSPWEIEPFLATSPIS 1206
Score = 39.6 bits (80), Expect(4) = 1e-096
Identities = 12/29 (41%), Positives = 23/29 (79%)
Frame = +1 / +1
Query: 502 AEFVVPCDRYMESLKRNYPIGMRFKMRFK 588
++F+V ++YME++K + +G RF+MRF+
Sbjct: 934 SQFIVGVNKYMEAIKHGFSLGTRFRMRFE 1020
Score = 37.3 bits (75), Expect(4) = 1e-034
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = -2 / -2
Query: 117 RSTENPP*VLVSEAVNVLQKE 55
R TENPP*VLVSEAV +L E
Sbjct: 557 RRTENPP*VLVSEAVKILTNE 495
Score = 33.6 bits (67), Expect(4) = 1e-096
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +3 / +1
Query: 588 GEEAPEQRFTGTIVGNVD 641
GEE+PE+ FTGTIVG+ D
Sbjct: 1021 GEESPERIFTGTIVGSGD 1074
Score = 28.1 bits (55), Expect(4) = 1e-034
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -1 / -2
Query: 736 GETLSGRGMEEASSHLTLR*RHLDSAH 656
GETLSG SSH T HL++ H
Sbjct: 1166 GETLSGL*TVVGSSHCTCNDLHLEAGH 1086
Score = 24.9 bits (48), Expect(4) = 1e-034
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -1 / -2
Query: 640 STFPTMVPVNLCSG 599
S PT+VPVN+ SG
Sbjct: 1073 SPLPTIVPVNILSG 1032
>gb|AY091392.1| Arabidopsis thaliana putative auxin response factor protein
(At3g61830) mRNA, complete cds
Length = 1840
Score = 276 bits (597), Expect(4) = 1e-096
Identities = 112/148 (75%), Positives = 127/148 (85%)
Frame = +2 / +1
Query: 53 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFR 232
HSF K LTASDTSTHGGFSVLR+HA ECLP LDMT+ PTQELV +DLHG EWRF+HIFR
Sbjct: 376 HSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQATPTQELVTRDLHGFEWRFKHIFR 555
Query: 233 GQPRRHLLQSGWSVFVSAKRLGAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSHS 412
GQPRRHLL +GWS FVS+KRL AGDAF+FLRG++G+LRVGVRR R Q+ +P+SVISS S
Sbjct: 556 GQPRRHLLTTGWSTFVSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPTSVISSQS 735
Query: 413 MHLGVLATAWHAVNTGTMFTVYYKPRTS 496
MHLGVLATA HAV T T+F V+YKPR S
Sbjct: 736 MHLGVLATASHAVRTTTIFVVFYKPRIS 819
Score = 121 bits (258), Expect(4) = 2e-036
Identities = 59/105 (56%), Positives = 67/105 (63%)
Frame = -2 / -3
Query: 495 LVLGL**TVNMVPVLTACHAVARTPRCMLWLDITEDGTFACCLMARLTPTRSSPLSPLRK 316
L+LGL* T +V V TA AVARTP+CML L+ITE G C RLTPTR SP SPL+
Sbjct: 818 LILGL*KTTKIVVVRTA*EAVARTPKCML*LEITEVGIVL*CRANRLTPTRKSPFSPLKN 639
Query: 315 MKASPAPRRLALTKTLQPLCKRCLRG*PLNMWRKRHSTPCRSLAT 181
KASPA T LQP+ +CLRG PLN+ HS P RSL T
Sbjct: 638 TKASPATSLFEDTNVLQPVVSKCLRGCPLNICLNLHSKP*RSLVT 504
Score = 112 bits (240), Expect = 2e-023
Identities = 57/158 (36%), Positives = 85/158 (53%)
Frame = +1 / +3
Query: 22 TSCCTCKATRALLLQDIDSL*YQHSWWILGAAAPCR*VSSATGYDPSTSNTRACSQGPAW 201
T C T A + + D + Y+HSWWIL ++ *+ + GYD S S +R C +W
Sbjct: 345 TYCWTN*ARVSFVC*DFNGFRYKHSWWILCSS*TRH*MLAFFGYDTSYSYSRTCD*RSSW 524
Query: 202 CGMALSPHIQRSTTKASFAEWLECFC*CQASWCWRCLHLSKR**WGASCRSQACHEAASK 381
M + +IQR+TT+A LE C + + WRC + + * WG + S+ A+
Sbjct: 525 L*MEV*AYIQRTTTEAFAYYGLEYICILEKTCSWRCFCVLEG*EWGFTGWSETISSASKH 704
Query: 382 CSIFSNIKPQHASWCSCYSMACC*HWDHVYCLLQA*DK 495
+ F K +HA SCYS +CC + +++ CLLQA*DK
Sbjct: 705 NAYFGYFKSEHAFGSSCYSFSCCAYNNNLCCLLQA*DK 818
Score = 65.7 bits (137), Expect(4) = 1e-096
Identities = 21/40 (52%), Positives = 32/40 (80%)
Frame = +3 / +1
Query: 657 WAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPPPIN 776
W SKWR L+V+WDE +++ RP++VSPW+IEP ++ PI+
Sbjct: 970 WPASKWRSLQVQWDEPTTVQRPDKVSPWEIEPFLATSPIS 1089
Score = 39.6 bits (80), Expect(4) = 1e-096
Identities = 12/29 (41%), Positives = 23/29 (79%)
Frame = +1 / +1
Query: 502 AEFVVPCDRYMESLKRNYPIGMRFKMRFK 588
++F+V ++YME++K + +G RF+MRF+
Sbjct: 817 SQFIVGVNKYMEAIKHGFSLGTRFRMRFE 903
Score = 37.3 bits (75), Expect(4) = 2e-036
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = -2 / -3
Query: 117 RSTENPP*VLVSEAVNVLQKE 55
R TENPP*VLVSEAV +L E
Sbjct: 440 RRTENPP*VLVSEAVKILTNE 378
Score = 33.6 bits (67), Expect(4) = 1e-096
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +3 / +1
Query: 588 GEEAPEQRFTGTIVGNVD 641
GEE+PE+ FTGTIVG+ D
Sbjct: 904 GEESPERIFTGTIVGSGD 957
Score = 28.1 bits (55), Expect(4) = 2e-036
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -1 / -3
Query: 736 GETLSGRGMEEASSHLTLR*RHLDSAH 656
GETLSG SSH T HL++ H
Sbjct: 1049 GETLSGL*TVVGSSHCTCNDLHLEAGH 969
Score = 24.9 bits (48), Expect(4) = 2e-036
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -1 / -3
Query: 640 STFPTMVPVNLCSG 599
S PT+VPVN+ SG
Sbjct: 956 SPLPTIVPVNILSG 915
>gb|AF334717.1| Arabidopsis thaliana auxin response factor ARF18 (At3g61830) mRNA,
complete cds
Length = 1809
Score = 276 bits (597), Expect(4) = 1e-096
Identities = 112/148 (75%), Positives = 127/148 (85%)
Frame = +2 / +1
Query: 53 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFR 232
HSF K LTASDTSTHGGFSVLR+HA ECLP LDMT+ PTQELV +DLHG EWRF+HIFR
Sbjct: 376 HSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQATPTQELVTRDLHGFEWRFKHIFR 555
Query: 233 GQPRRHLLQSGWSVFVSAKRLGAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSHS 412
GQPRRHLL +GWS FVS+KRL AGDAF+FLRG++G+LRVGVRR R Q+ +P+SVISS S
Sbjct: 556 GQPRRHLLTTGWSTFVSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPTSVISSQS 735
Query: 413 MHLGVLATAWHAVNTGTMFTVYYKPRTS 496
MHLGVLATA HAV T T+F V+YKPR S
Sbjct: 736 MHLGVLATASHAVRTTTIFVVFYKPRIS 819
Score = 121 bits (258), Expect(4) = 2e-036
Identities = 59/105 (56%), Positives = 67/105 (63%)
Frame = -2 / -2
Query: 495 LVLGL**TVNMVPVLTACHAVARTPRCMLWLDITEDGTFACCLMARLTPTRSSPLSPLRK 316
L+LGL* T +V V TA AVARTP+CML L+ITE G C RLTPTR SP SPL+
Sbjct: 818 LILGL*KTTKIVVVRTA*EAVARTPKCML*LEITEVGIVL*CRANRLTPTRKSPFSPLKN 639
Query: 315 MKASPAPRRLALTKTLQPLCKRCLRG*PLNMWRKRHSTPCRSLAT 181
KASPA T LQP+ +CLRG PLN+ HS P RSL T
Sbjct: 638 TKASPATSLFEDTNVLQPVVSKCLRGCPLNICLNLHSKP*RSLVT 504
Score = 112 bits (240), Expect = 2e-023
Identities = 57/158 (36%), Positives = 85/158 (53%)
Frame = +1 / +3
Query: 22 TSCCTCKATRALLLQDIDSL*YQHSWWILGAAAPCR*VSSATGYDPSTSNTRACSQGPAW 201
T C T A + + D + Y+HSWWIL ++ *+ + GYD S S +R C +W
Sbjct: 345 TYCWTN*ARVSFVC*DFNGFRYKHSWWILCSS*TRH*MLAFFGYDTSYSYSRTCD*RSSW 524
Query: 202 CGMALSPHIQRSTTKASFAEWLECFC*CQASWCWRCLHLSKR**WGASCRSQACHEAASK 381
M + +IQR+TT+A LE C + + WRC + + * WG + S+ A+
Sbjct: 525 L*MEV*AYIQRTTTEAFAYYGLEYICILEKTCSWRCFCVLEG*EWGFTGWSETISSASKH 704
Query: 382 CSIFSNIKPQHASWCSCYSMACC*HWDHVYCLLQA*DK 495
+ F K +HA SCYS +CC + +++ CLLQA*DK
Sbjct: 705 NAYFGYFKSEHAFGSSCYSFSCCAYNNNLCCLLQA*DK 818
Score = 65.7 bits (137), Expect(4) = 1e-096
Identities = 21/40 (52%), Positives = 32/40 (80%)
Frame = +3 / +1
Query: 657 WAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPPPIN 776
W SKWR L+V+WDE +++ RP++VSPW+IEP ++ PI+
Sbjct: 970 WPASKWRSLQVQWDEPTTVQRPDKVSPWEIEPFLATSPIS 1089
Score = 39.6 bits (80), Expect(4) = 1e-096
Identities = 12/29 (41%), Positives = 23/29 (79%)
Frame = +1 / +1
Query: 502 AEFVVPCDRYMESLKRNYPIGMRFKMRFK 588
++F+V ++YME++K + +G RF+MRF+
Sbjct: 817 SQFIVGVNKYMEAIKHGFSLGTRFRMRFE 903
Score = 37.3 bits (75), Expect(4) = 2e-036
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = -2 / -2
Query: 117 RSTENPP*VLVSEAVNVLQKE 55
R TENPP*VLVSEAV +L E
Sbjct: 440 RRTENPP*VLVSEAVKILTNE 378
Score = 33.6 bits (67), Expect(4) = 1e-096
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +3 / +1
Query: 588 GEEAPEQRFTGTIVGNVD 641
GEE+PE+ FTGTIVG+ D
Sbjct: 904 GEESPERIFTGTIVGSGD 957
Score = 28.1 bits (55), Expect(4) = 2e-036
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -1 / -2
Query: 736 GETLSGRGMEEASSHLTLR*RHLDSAH 656
GETLSG SSH T HL++ H
Sbjct: 1049 GETLSGL*TVVGSSHCTCNDLHLEAGH 969
Score = 24.9 bits (48), Expect(4) = 2e-036
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -1 / -2
Query: 640 STFPTMVPVNLCSG 599
S PT+VPVN+ SG
Sbjct: 956 SPLPTIVPVNILSG 915
>gb|BU635530.1|BU635530 024G07 Infected Arabidopsis Leaf Arabidopsis thaliana cDNA, mRNA
sequence
Length = 725
Score = 281 bits (608), Expect(2) = 1e-096
Identities = 113/145 (77%), Positives = 128/145 (88%)
Frame = +2 / +1
Query: 62 CKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFRGQP 241
C+ DTSTHGGFSVLRRHAD+CLPPLDM++QPP QELVA DLH EW FRHIFRGQP
Sbjct: 1 CRH*LLPDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQP 180
Query: 242 RRHLLQSGWSVFVSAKRLGAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSHSMHL 421
RRHLL +GWSVFVS+K+L AGDAFIFLRG++ ELRVGVRR MRQQ N+PSSVISSHSMH+
Sbjct: 181 RRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHI 360
Query: 422 GVLATAWHAVNTGTMFTVYYKPRTS 496
GVLATA HA+ TGT+F+V+YKPRTS
Sbjct: 361 GVLATAAHAITTGTIFSVFYKPRTS 435
Score = 127 bits (273), Expect(4) = 8e-042
Identities = 61/105 (58%), Positives = 71/105 (67%)
Frame = -2 / -1
Query: 495 LVLGL**TVNMVPVLTACHAVARTPRCMLWLDITEDGTFACCLMARLTPTRSSPLSPLRK 316
LVLGL* T +VPV+ A AVARTP CML L++T+DG CCLM RLTPTRSS SPL+
Sbjct: 434 LVLGL*KTEKIVPVVMA*AAVARTPICML*LEMTDDGILVCCLMCRLTPTRSSSFSPLKN 255
Query: 315 MKASPAPRRLALTKTLQPLCKRCLRG*PLNMWRKRHSTPCRSLAT 181
MKASPA LTKTL P+ + G P M K HS C+S+AT
Sbjct: 254 MKASPATSFFELTKTLHPVVSK*RLGWPRKMCLKCHSLLCKSVAT 120
Score = 95.5 bits (202), Expect(2) = 1e-096
Identities = 36/58 (62%), Positives = 47/58 (81%)
Frame = +3 / +1
Query: 588 GEEAPEQRFTGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVS 761
GEEAPE+RF+GTIVG + + W +S+WR LKV+WDE SS+ RPERVSPW++EP V+
Sbjct: 526 GEEAPEKRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVA 699
Score = 92.3 bits (195), Expect(3) = 1e-026
Identities = 45/99 (45%), Positives = 63/99 (63%)
Frame = -1 / -3
Query: 385 NICLLPHGTPDSYTKLPTITS*KDEGISSTKTLGTNKNTPATLQKMPSWLTSEYVAKAPF 206
+I LL H P++Y++L +T *+ E I+S L NKNTP++ +M WL SE V K PF
Sbjct: 324 DISLLSHVPPNTYSELFILTP*EYESITSH*FLRANKNTPSSC*QMTPWLASENVPKMPF 145
Query: 205 HTMQVLGYKLLCWRLTGHIQWRKTLICMAPQHRESTMSA 89
+Q+ + L L GHIQ +T+ICM+P HRE+TM A
Sbjct: 144 TIVQISCNQFLPRWLLGHIQGWETIICMSP*HREATMCA 28
Score = 72.1 bits (151), Expect(3) = 2e-026
Identities = 35/96 (36%), Positives = 48/96 (50%)
Frame = +1 / +3
Query: 208 MALSPHIQRSTTKASFAEWLECFC*CQASWCWRCLHLSKR**WGASCRSQACHEAASKCS 387
MA H R T + W+ECFC* + + W C H+ K * A R A HE
Sbjct: 147 MAF*AHFPRPTKASFANNWMECFC*LEETSGW*CFHILKG*E*RAPSRC*AAHETTD*YP 326
Query: 388 IFSNIKPQHASWCSCYSMACC*HWDHVYCLLQA*DK 495
+ + K HA W C S +C + ++++CLLQA DK
Sbjct: 327 VICHFKS*HAYWGPCNSSSCHYNRNNLFCLLQAKDK 434
Score = 52.4 bits (108), Expect(4) = 8e-042
Identities = 26/48 (54%), Positives = 30/48 (62%)
Frame = -1 / -1
Query: 739 QGETLSGRGMEEASSHLTLR*RHLDSAHPA*SGSTFPTMVPVNLCSGA 596
QGETLSGR +E SSH T R H +S S PT+VP+NL SGA
Sbjct: 677 QGETLSGRNTDEGSSH*TFRDLHSESCQTEDLFS*TPTIVPLNLFSGA 534
Score = 45.1 bits (92), Expect(3) = 2e-026
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +1 / +3
Query: 85 YQHSWWILGAAAPCR*VSSATGYDPSTSNTR 177
++H+WW+LGA CR*+S GY P+T+ R
Sbjct: 24 HKHTWWLLGATETCR*LSPTLGYVPTTTVAR 116
Score = 42.8 bits (87), Expect(3) = 2e-026
Identities = 20/49 (40%), Positives = 29/49 (59%)
Frame = +2 / +3
Query: 593 RGSRTKVHWDHCWKCGS*SSWMG*I*MALPQGEVG*SFLHSTS*KGFSL 739
R SR KV W + W G * + * *M +P+G +G + + +S*K F+L
Sbjct: 531 RSSREKVQWHNSWCSGK*VFGLA*F*MEIPKGSMGRTLICISS*KSFTL 677
Score = 38.6 bits (78), Expect(3) = 1e-026
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = -1 / -3
Query: 496 TCPRLVVDSKHGPSVNSMPCCSKNTKMHAVA* 401
TCP LV D K N M CC K+ MHA+ *
Sbjct: 435 TCPWLVEDRKDCSCCNGMSCCCKDPNMHAMT* 340
Score = 29.9 bits (59), Expect(3) = 1e-026
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = -3 / -3
Query: 740 PGRNPFRTWNGGSFIPPHLEVTPFRFSPSSLIRIHISNNGPSEPLFWSLF 591
P N FRT F+P +L +PFR P + +N +EP S F
Sbjct: 678 PR*NSFRTKYR*GFVPLNL*GSPFRIMPDRRLIFLNTNYCATEPFLGSFF 529
Score = 25.8 bits (50), Expect(4) = 8e-042
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -2 / -3
Query: 588 LKPHFKSHPYRVISFQ*FHIAITGNNKL 505
L+ H ++H YR + F I I +NKL
Sbjct: 525 LESHLETHAYRQLLGLSFEIPIDAHNKL 442
Score = 23.5 bits (45), Expect(4) = 8e-042
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -2 / -1
Query: 117 RSTENPP*VLVS 82
RSTE PP VLVS
Sbjct: 56 RSTEKPPCVLVS 21
>ref|NM_130218.3| Arabidopsis thaliana ARF11 (AUXIN RESPONSE FACTOR 11); transcription
factor AT2G46530 (ARF11) transcript variant AT2G46530.1
mRNA, complete cds
Length = 2425
Score = 271 bits (587), Expect(4) = 7e-094
Identities = 111/149 (74%), Positives = 128/149 (85%)
Frame = +2 / +3
Query: 50 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIF 229
V SF K LTASDTSTHGGFSVLR+HA ECLP LDMT+ PTQELVA+DLHG EWRF+HIF
Sbjct: 678 VDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIF 857
Query: 230 RGQPRRHLLQSGWSVFVSAKRLGAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSH 409
RGQPRRHLL +GWS FV++KRL AGDAF+FLRG++G+LRVGVRR +QQ+ +P+SVISS
Sbjct: 858 RGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQ 1037
Query: 410 SMHLGVLATAWHAVNTGTMFTVYYKPRTS 496
SM LGVLATA HAV T T+F V+YKPR S
Sbjct: 1038 SMRLGVLATASHAVTTTTIFVVFYKPRIS 1124
Score = 123 bits (264), Expect(3) = 8e-033
Identities = 58/105 (55%), Positives = 71/105 (67%)
Frame = -2 / -1
Query: 495 LVLGL**TVNMVPVLTACHAVARTPRCMLWLDITEDGTFACCLMARLTPTRSSPLSPLRK 316
L+LGL* T N+V V+TA AVARTP+ +L L+IT+ G CCL RLTPTR SP+SPL+
Sbjct: 1123 LILGL*KTTNIVVVVTA*EAVARTPKRIL*LEITDAGIVLCCLAKRLTPTRKSPVSPLKN 944
Query: 315 MKASPAPRRLALTKTLQPLCKRCLRG*PLNMWRKRHSTPCRSLAT 181
ASPA +T LQP+ +CL G PLN+ HS P RSLAT
Sbjct: 943 TNASPATSLFEVTNVLQPVVSKCLLGCPLNICLNLHS*P*RSLAT 809
Score = 62.9 bits (131), Expect(4) = 7e-094
Identities = 21/32 (65%), Positives = 26/32 (81%)
Frame = +3 / +3
Query: 657 WAESKWRYLKVRWDEASSIPRPERVSPWQIEP 752
W SKWR L+++WDE SSI RP +VSPW+IEP
Sbjct: 1275 WPASKWRSLQIQWDEPSSIQRPNKVSPWEIEP 1370
Score = 37.7 bits (76), Expect(4) = 7e-094
Identities = 10/29 (34%), Positives = 23/29 (79%)
Frame = +1 / +3
Query: 502 AEFVVPCDRYMESLKRNYPIGMRFKMRFK 588
++F++ ++YM ++K + +GMR++MRF+
Sbjct: 1122 SQFIISVNKYMMAMKNGFSLGMRYRMRFE 1208
Score = 37.3 bits (75), Expect(3) = 8e-033
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = -2 / -1
Query: 117 RSTENPP*VLVSEAVNVLQKECT 49
R TENPP VLVSEAV + KE T
Sbjct: 745 RRTENPPCVLVSEAVRIFTKEST 677
Score = 33.1 bits (66), Expect(4) = 7e-094
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +3 / +3
Query: 588 GEEAPEQRFTGTIVGNVD 641
GEE+PE+ FTGTI+G+ D
Sbjct: 1209 GEESPERIFTGTIIGSGD 1262
Score = 28.6 bits (56), Expect(3) = 8e-033
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1 / -1
Query: 736 GETLSGRGMEEASSHLTLR*RHLDSAH 656
GETL G +E+ SSH HL++ H
Sbjct: 1354 GETLFGLCIEDGSSHWICNDLHLEAGH 1274
>ref|NM_201972.1| Arabidopsis thaliana ARF11 (AUXIN RESPONSE FACTOR 11); transcription
factor AT2G46530 (ARF11) transcript variant AT2G46530.2
mRNA, complete cds
Length = 2413
Score = 271 bits (587), Expect(4) = 7e-094
Identities = 111/149 (74%), Positives = 128/149 (85%)
Frame = +2 / +3
Query: 50 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIF 229
V SF K LTASDTSTHGGFSVLR+HA ECLP LDMT+ PTQELVA+DLHG EWRF+HIF
Sbjct: 666 VDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIF 845
Query: 230 RGQPRRHLLQSGWSVFVSAKRLGAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSH 409
RGQPRRHLL +GWS FV++KRL AGDAF+FLRG++G+LRVGVRR +QQ+ +P+SVISS
Sbjct: 846 RGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQ 1025
Query: 410 SMHLGVLATAWHAVNTGTMFTVYYKPRTS 496
SM LGVLATA HAV T T+F V+YKPR S
Sbjct: 1026 SMRLGVLATASHAVTTTTIFVVFYKPRIS 1112
Score = 123 bits (264), Expect(3) = 8e-033
Identities = 58/105 (55%), Positives = 71/105 (67%)
Frame = -2 / -1
Query: 495 LVLGL**TVNMVPVLTACHAVARTPRCMLWLDITEDGTFACCLMARLTPTRSSPLSPLRK 316
L+LGL* T N+V V+TA AVARTP+ +L L+IT+ G CCL RLTPTR SP+SPL+
Sbjct: 1111 LILGL*KTTNIVVVVTA*EAVARTPKRIL*LEITDAGIVLCCLAKRLTPTRKSPVSPLKN 932
Query: 315 MKASPAPRRLALTKTLQPLCKRCLRG*PLNMWRKRHSTPCRSLAT 181
ASPA +T LQP+ +CL G PLN+ HS P RSLAT
Sbjct: 931 TNASPATSLFEVTNVLQPVVSKCLLGCPLNICLNLHS*P*RSLAT 797
Score = 62.9 bits (131), Expect(4) = 7e-094
Identities = 21/32 (65%), Positives = 26/32 (81%)
Frame = +3 / +3
Query: 657 WAESKWRYLKVRWDEASSIPRPERVSPWQIEP 752
W SKWR L+++WDE SSI RP +VSPW+IEP
Sbjct: 1263 WPASKWRSLQIQWDEPSSIQRPNKVSPWEIEP 1358
Score = 37.7 bits (76), Expect(4) = 7e-094
Identities = 10/29 (34%), Positives = 23/29 (79%)
Frame = +1 / +3
Query: 502 AEFVVPCDRYMESLKRNYPIGMRFKMRFK 588
++F++ ++YM ++K + +GMR++MRF+
Sbjct: 1110 SQFIISVNKYMMAMKNGFSLGMRYRMRFE 1196
Score = 37.3 bits (75), Expect(3) = 8e-033
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = -2 / -1
Query: 117 RSTENPP*VLVSEAVNVLQKECT 49
R TENPP VLVSEAV + KE T
Sbjct: 733 RRTENPPCVLVSEAVRIFTKEST 665
Score = 33.1 bits (66), Expect(4) = 7e-094
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +3 / +3
Query: 588 GEEAPEQRFTGTIVGNVD 641
GEE+PE+ FTGTI+G+ D
Sbjct: 1197 GEESPERIFTGTIIGSGD 1250
Score = 28.6 bits (56), Expect(3) = 8e-033
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1 / -1
Query: 736 GETLSGRGMEEASSHLTLR*RHLDSAH 656
GETL G +E+ SSH HL++ H
Sbjct: 1342 GETLFGLCIEDGSSHWICNDLHLEAGH 1262
>ref|NM_001036471.1| Arabidopsis thaliana ARF11 (AUXIN RESPONSE FACTOR 11);
transcription factor AT2G46530 (ARF11) transcript
variant AT2G46530.3 mRNA, complete cds
Length = 2171
Score = 271 bits (587), Expect(4) = 7e-094
Identities = 111/149 (74%), Positives = 128/149 (85%)
Frame = +2 / +1
Query: 50 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIF 229
V SF K LTASDTSTHGGFSVLR+HA ECLP LDMT+ PTQELVA+DLHG EWRF+HIF
Sbjct: 424 VDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIF 603
Query: 230 RGQPRRHLLQSGWSVFVSAKRLGAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSH 409
RGQPRRHLL +GWS FV++KRL AGDAF+FLRG++G+LRVGVRR +QQ+ +P+SVISS
Sbjct: 604 RGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQ 783
Query: 410 SMHLGVLATAWHAVNTGTMFTVYYKPRTS 496
SM LGVLATA HAV T T+F V+YKPR S
Sbjct: 784 SMRLGVLATASHAVTTTTIFVVFYKPRIS 870
Score = 123 bits (264), Expect(3) = 6e-033
Identities = 58/105 (55%), Positives = 71/105 (67%)
Frame = -2 / -1
Query: 495 LVLGL**TVNMVPVLTACHAVARTPRCMLWLDITEDGTFACCLMARLTPTRSSPLSPLRK 316
L+LGL* T N+V V+TA AVARTP+ +L L+IT+ G CCL RLTPTR SP+SPL+
Sbjct: 869 LILGL*KTTNIVVVVTA*EAVARTPKRIL*LEITDAGIVLCCLAKRLTPTRKSPVSPLKN 690
Query: 315 MKASPAPRRLALTKTLQPLCKRCLRG*PLNMWRKRHSTPCRSLAT 181
ASPA +T LQP+ +CL G PLN+ HS P RSLAT
Sbjct: 689 TNASPATSLFEVTNVLQPVVSKCLLGCPLNICLNLHS*P*RSLAT 555
Score = 62.9 bits (131), Expect(4) = 7e-094
Identities = 21/32 (65%), Positives = 26/32 (81%)
Frame = +3 / +1
Query: 657 WAESKWRYLKVRWDEASSIPRPERVSPWQIEP 752
W SKWR L+++WDE SSI RP +VSPW+IEP
Sbjct: 1021 WPASKWRSLQIQWDEPSSIQRPNKVSPWEIEP 1116
Score = 37.7 bits (76), Expect(4) = 7e-094
Identities = 10/29 (34%), Positives = 23/29 (79%)
Frame = +1 / +1
Query: 502 AEFVVPCDRYMESLKRNYPIGMRFKMRFK 588
++F++ ++YM ++K + +GMR++MRF+
Sbjct: 868 SQFIISVNKYMMAMKNGFSLGMRYRMRFE 954
Score = 37.3 bits (75), Expect(3) = 6e-033
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = -2 / -1
Query: 117 RSTENPP*VLVSEAVNVLQKECT 49
R TENPP VLVSEAV + KE T
Sbjct: 491 RRTENPPCVLVSEAVRIFTKEST 423
Score = 33.1 bits (66), Expect(4) = 7e-094
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +3 / +1
Query: 588 GEEAPEQRFTGTIVGNVD 641
GEE+PE+ FTGTI+G+ D
Sbjct: 955 GEESPERIFTGTIIGSGD 1008
Score = 28.6 bits (56), Expect(3) = 6e-033
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1 / -1
Query: 736 GETLSGRGMEEASSHLTLR*RHLDSAH 656
GETL G +E+ SSH HL++ H
Sbjct: 1100 GETLFGLCIEDGSSHWICNDLHLEAGH 1020
>gb|AY669791.1| Arabidopsis thaliana clone C105346 ARF11 (At2g46530) mRNA, complete
cds
Length = 1900
Score = 271 bits (587), Expect(4) = 7e-094
Identities = 111/149 (74%), Positives = 128/149 (85%)
Frame = +2 / +1
Query: 50 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIF 229
V SF K LTASDTSTHGGFSVLR+HA ECLP LDMT+ PTQELVA+DLHG EWRF+HIF
Sbjct: 424 VDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIF 603
Query: 230 RGQPRRHLLQSGWSVFVSAKRLGAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSH 409
RGQPRRHLL +GWS FV++KRL AGDAF+FLRG++G+LRVGVRR +QQ+ +P+SVISS
Sbjct: 604 RGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQ 783
Query: 410 SMHLGVLATAWHAVNTGTMFTVYYKPRTS 496
SM LGVLATA HAV T T+F V+YKPR S
Sbjct: 784 SMRLGVLATASHAVTTTTIFVVFYKPRIS 870
Score = 123 bits (264), Expect(3) = 5e-033
Identities = 58/105 (55%), Positives = 71/105 (67%)
Frame = -2 / -3
Query: 495 LVLGL**TVNMVPVLTACHAVARTPRCMLWLDITEDGTFACCLMARLTPTRSSPLSPLRK 316
L+LGL* T N+V V+TA AVARTP+ +L L+IT+ G CCL RLTPTR SP+SPL+
Sbjct: 869 LILGL*KTTNIVVVVTA*EAVARTPKRIL*LEITDAGIVLCCLAKRLTPTRKSPVSPLKN 690
Query: 315 MKASPAPRRLALTKTLQPLCKRCLRG*PLNMWRKRHSTPCRSLAT 181
ASPA +T LQP+ +CL G PLN+ HS P RSLAT
Sbjct: 689 TNASPATSLFEVTNVLQPVVSKCLLGCPLNICLNLHS*P*RSLAT 555
Score = 62.9 bits (131), Expect(4) = 7e-094
Identities = 21/32 (65%), Positives = 26/32 (81%)
Frame = +3 / +1
Query: 657 WAESKWRYLKVRWDEASSIPRPERVSPWQIEP 752
W SKWR L+++WDE SSI RP +VSPW+IEP
Sbjct: 1021 WPASKWRSLQIQWDEPSSIQRPNKVSPWEIEP 1116
Score = 37.7 bits (76), Expect(4) = 7e-094
Identities = 10/29 (34%), Positives = 23/29 (79%)
Frame = +1 / +1
Query: 502 AEFVVPCDRYMESLKRNYPIGMRFKMRFK 588
++F++ ++YM ++K + +GMR++MRF+
Sbjct: 868 SQFIISVNKYMMAMKNGFSLGMRYRMRFE 954
Score = 37.3 bits (75), Expect(3) = 5e-033
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = -2 / -3
Query: 117 RSTENPP*VLVSEAVNVLQKECT 49
R TENPP VLVSEAV + KE T
Sbjct: 491 RRTENPPCVLVSEAVRIFTKEST 423
Score = 33.1 bits (66), Expect(4) = 7e-094
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +3 / +1
Query: 588 GEEAPEQRFTGTIVGNVD 641
GEE+PE+ FTGTI+G+ D
Sbjct: 955 GEESPERIFTGTIIGSGD 1008
Score = 28.6 bits (56), Expect(3) = 5e-033
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1 / -3
Query: 736 GETLSGRGMEEASSHLTLR*RHLDSAH 656
GETL G +E+ SSH HL++ H
Sbjct: 1100 GETLFGLCIEDGSSHWICNDLHLEAGH 1020
>emb|BX815613.1|CNS0ADXB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS78ZB02 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 2327
Score = 262 bits (567), Expect(3) = 2e-092
Identities = 105/125 (84%), Positives = 115/125 (92%)
Frame = +2 / +1
Query: 50 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIF 229
VHSFCKTLTASDTSTHGGFSVLRRHAD+CLPPLDM++QPP QELVA DLH EW FRHIF
Sbjct: 475 VHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIF 654
Query: 230 RGQPRRHLLQSGWSVFVSAKRLGAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSH 409
RGQPRRHLL +GWSVFVS+K+L AGDAFIFLRG++ ELRVGVRR MRQQ N+PSSVISSH
Sbjct: 655 RGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSH 834
Query: 410 SMHLG 424
SMH+G
Sbjct: 835 SMHIG 849
Score = 101 bits (215), Expect(5) = 4e-041
Identities = 45/81 (55%), Positives = 53/81 (65%)
Frame = -2 / -1
Query: 423 PRCMLWLDITEDGTFACCLMARLTPTRSSPLSPLRKMKASPAPRRLALTKTLQPLCKRCL 244
P CML L++T+DG CCLM RLTPTRSS SPL+ MKASPA LTKTL P+ +
Sbjct: 848 PICML*LEMTDDGILVCCLMCRLTPTRSSSFSPLKNMKASPATSFFELTKTLHPVVSK*R 669
Query: 243 RG*PLNMWRKRHSTPCRSLAT 181
G P M K HS C+S+AT
Sbjct: 668 LGWPRKMCLKCHSLLCKSVAT 606
Score = 98.7 bits (209), Expect(2) = 5e-021
Identities = 49/109 (44%), Positives = 69/109 (63%)
Frame = -1 / -3
Query: 385 NICLLPHGTPDSYTKLPTITS*KDEGISSTKTLGTNKNTPATLQKMPSWLTSEYVAKAPF 206
+I LL H P++Y++L +T *+ E I+S L NKNTP++ +M WL SE V K PF
Sbjct: 810 DISLLSHVPPNTYSELFILTP*EYESITSH*FLRANKNTPSSC*QMTPWLASENVPKMPF 631
Query: 205 HTMQVLGYKLLCWRLTGHIQWRKTLICMAPQHRESTMSAGIRGCQCLAE 59
+Q+ +LL L GHIQ +T+ICM+P HRE+TM A + CLA+
Sbjct: 630 TIVQISRNQLLPRWLLGHIQGWETIICMSP*HREATMCACV*SS*CLAK 484
Score = 95.5 bits (202), Expect(3) = 2e-092
Identities = 36/58 (62%), Positives = 47/58 (81%)
Frame = +3 / +1
Query: 588 GEEAPEQRFTGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVS 761
GEEAPE+RF+GTIVG + + W +S+WR LKV+WDE SS+ RPERVSPW++EP V+
Sbjct: 1009 GEEAPEKRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVA 1182
Score = 52.8 bits (109), Expect(3) = 1e-022
Identities = 19/43 (44%), Positives = 28/43 (65%)
Frame = +1 / +3
Query: 49 RALLLQDIDSL*YQHSWWILGAAAPCR*VSSATGYDPSTSNTR 177
R +LQD + ++H+WW+LGA CR*+S GY P+T+ R
Sbjct: 474 RTFILQDTNCFRHKHTWWLLGATETCR*LSPTLGYVPTTTVAR 602
Score = 51.5 bits (106), Expect(3) = 1e-022
Identities = 26/74 (35%), Positives = 33/74 (44%)
Frame = +1 / +3
Query: 208 MALSPHIQRSTTKASFAEWLECFC*CQASWCWRCLHLSKR**WGASCRSQACHEAASKCS 387
MA H R T + W+ECFC* + + W C H+ K * A R A HE
Sbjct: 633 MAF*AHFPRPTKASFANNWMECFC*LEETSGW*CFHILKG*E*RAPSRC*AAHETTD*YP 812
Query: 388 IFSNIKPQHASWCS 429
+ + K HA W S
Sbjct: 813 VICHFKS*HAYWGS 854
Score = 49.6 bits (102), Expect(5) = 4e-041
Identities = 25/48 (52%), Positives = 29/48 (60%)
Frame = -1 / -1
Query: 739 QGETLSGRGMEEASSHLTLR*RHLDSAHPA*SGSTFPTMVPVNLCSGA 596
QGETLSGR +E SSH T H +S S PT+VP+NL SGA
Sbjct: 1160 QGETLSGRNTDEGSSH*TFSDLHSESCQTEDLFS*TPTIVPLNLFSGA 1017
Score = 44.6 bits (91), Expect(5) = 4e-041
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -2 / -1
Query: 117 RSTENPP*VLVSEAVNVLQKECT 49
RSTE PP VLVSEAV+VLQ ECT
Sbjct: 542 RSTEKPPCVLVSEAVSVLQNECT 474
Score = 42.3 bits (86), Expect(3) = 1e-022
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +1 / +1
Query: 496 SPAEFVVPCDRYMESLKRNYPIGMRFKMRFKVKRLQNKGSLGPLL 630
S +EF+V +RY+E+ + +GMRFKMRF+ + K G ++
Sbjct: 916 SRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPEKRFSGTIV 1050
Score = 29.9 bits (59), Expect(2) = 5e-021
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = -3 / -3
Query: 740 PGRNPFRTWNGGSFIPPHLEVTPFRFSPSSLIRIHISNNGPSEPLFWSLF 591
P N FRT F+P +L +PFR P + +N +EP S F
Sbjct: 1161 PR*NSFRTKYR*GFVPLNL*RSPFRIMPDRRLIFLNTNYCATEPFLGSFF 1012
Score = 25.8 bits (50), Expect(5) = 4e-041
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -2 / -3
Query: 588 LKPHFKSHPYRVISFQ*FHIAITGNNKL 505
L+ H ++H YR + F I I +NKL
Sbjct: 1008 LESHLETHAYRQLLGLSFEIPIDAHNKL 925
Score = 24.0 bits (46), Expect(3) = 2e-092
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2 / +2
Query: 419 LGVLATAWHAVNTGTMFTVY 478
LGVLATA HA++ Y
Sbjct: 845 LGVLATAAHAIHRNIFSVFY 904
Score = 23.1 bits (44), Expect(5) = 4e-041
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -1 / -2
Query: 484 LVVDSKHGPSVNSMPCCSKN 425
L V+ + VN M CC K+
Sbjct: 910 LAVEDRKDVPVNGMSCCRKD 851
>gb|U53672.2|ATU53672 Arabidopsis thaliana early auxin-induced IAA22 mRNA, complete cds
Length = 3807
Score = 227 bits (491), Expect(3) = 2e-083
Identities = 91/146 (62%), Positives = 112/146 (76%)
Frame = +2 / +3
Query: 59 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFRGQ 238
FCKTLTASDTSTHGGFSV RR A++ PPLD + QPP QE+VAKDLH W FRHI+RGQ
Sbjct: 594 FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQ 773
Query: 239 PRRHLLQSGWSVFVSAKRLGAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSHSMH 418
P+RHLL +GWSVFVS KRL AGD+ +F+R + +L +G+RRA RQ + SSVISS SMH
Sbjct: 774 PKRHLLTTGWSVFVSTKRLFAGDSVLFVRDEKSQLMLGIRRANRQTPTLSSSVISSDSMH 953
Query: 419 LGVLATAWHAVNTGTMFTVYYKPRTS 496
+G+LA A HA + FT+++ PR S
Sbjct: 954 IGILAAAAHANANSSPFTIFFNPRAS 1031
Score = 84.5 bits (178), Expect(3) = 2e-083
Identities = 34/73 (46%), Positives = 46/73 (63%)
Frame = +3 / +3
Query: 591 EEAPEQRFTGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPPP 770
E+ +R+ GT+ G D D W S+WR L+V WDE+++ RP RVS W+IEP ++P
Sbjct: 1125 EDCGVRRYMGTVTGISDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIEPVITPFY 1304
Query: 771 INPLPVHRPKRPR 809
I P P RPK PR
Sbjct: 1305 ICPPPFFRPKYPR 1343
Score = 80.3 bits (169), Expect(3) = 6e-023
Identities = 44/105 (41%), Positives = 54/105 (51%)
Frame = -2 / -3
Query: 495 LVLGL**TVNMVPVLTACHAVARTPRCMLWLDITEDGTFACCLMARLTPTRSSPLSPLRK 316
L LGL V + + A A A P C+L LD+T++ CL ARL P S S L
Sbjct: 1030 LALGLKKMVKGLLLALA*AAAASIPMCILSLDMTDEERVGVCLFARLIPNISCDFSSLTN 851
Query: 315 MKASPAPRRLALTKTLQPLCKRCLRG*PLNMWRKRHSTPCRSLAT 181
SPA LTKTLQP+ +CL G P + K H C+SLAT
Sbjct: 850 KTESPANSLFVLTKTLQPVVSKCLFGWPR*ICLKVHVVSCKSLAT 716
Score = 40.0 bits (81), Expect(3) = 6e-023
Identities = 19/23 (82%), Positives = 19/23 (82%)
Frame = -2 / -3
Query: 126 AWRRSTENPP*VLVSEAVNVLQK 58
A RR TENPP*VLVS AV VLQK
Sbjct: 661 AARRGTENPP*VLVSLAVRVLQK 593
Score = 40.0 bits (81), Expect(3) = 2e-083
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +1 / +3
Query: 496 SPAEFVVPCDRYMESLKRNYPIGMRFKMRFKVK 594
SP+EFVVP +Y ++L +GMRF+M F+ +
Sbjct: 1029 SPSEFVVPLAKYNKALYAQVSLGMRFRMMFETE 1127
Score = 27.6 bits (54), Expect(3) = 6e-023
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -1 / -3
Query: 700 SSHLTLR*RHLDSAHPA*SGSTFPTMVPVNL 608
SSH T R RH + H S S P VP+ L
Sbjct: 1234 SSHPT*RLRHCEPFHLTGSRSLIPVTVPIYL 1142
>ref|NM_101780.1| Arabidopsis thaliana ARF19; transcription factor AT1G19220 (ARF19)
mRNA, complete cds
Length = 3588
Score = 227 bits (491), Expect(3) = 2e-083
Identities = 91/146 (62%), Positives = 112/146 (76%)
Frame = +2 / +1
Query: 59 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFRGQ 238
FCKTLTASDTSTHGGFSV RR A++ PPLD + QPP QE+VAKDLH W FRHI+RGQ
Sbjct: 376 FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQ 555
Query: 239 PRRHLLQSGWSVFVSAKRLGAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSHSMH 418
P+RHLL +GWSVFVS KRL AGD+ +F+R + +L +G+RRA RQ + SSVISS SMH
Sbjct: 556 PKRHLLTTGWSVFVSTKRLFAGDSVLFVRDEKSQLMLGIRRANRQTPTLSSSVISSDSMH 735
Query: 419 LGVLATAWHAVNTGTMFTVYYKPRTS 496
+G+LA A HA + FT+++ PR S
Sbjct: 736 IGILAAAAHANANSSPFTIFFNPRAS 813
Score = 84.5 bits (178), Expect(3) = 2e-083
Identities = 34/73 (46%), Positives = 46/73 (63%)
Frame = +3 / +1
Query: 591 EEAPEQRFTGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPPP 770
E+ +R+ GT+ G D D W S+WR L+V WDE+++ RP RVS W+IEP ++P
Sbjct: 907 EDCGVRRYMGTVTGISDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIEPVITPFY 1086
Query: 771 INPLPVHRPKRPR 809
I P P RPK PR
Sbjct: 1087 ICPPPFFRPKYPR 1125
Score = 80.3 bits (169), Expect(3) = 6e-023
Identities = 44/105 (41%), Positives = 54/105 (51%)
Frame = -2 / -2
Query: 495 LVLGL**TVNMVPVLTACHAVARTPRCMLWLDITEDGTFACCLMARLTPTRSSPLSPLRK 316
L LGL V + + A A A P C+L LD+T++ CL ARL P S S L
Sbjct: 812 LALGLKKMVKGLLLALA*AAAASIPMCILSLDMTDEERVGVCLFARLIPNISCDFSSLTN 633
Query: 315 MKASPAPRRLALTKTLQPLCKRCLRG*PLNMWRKRHSTPCRSLAT 181
SPA LTKTLQP+ +CL G P + K H C+SLAT
Sbjct: 632 KTESPANSLFVLTKTLQPVVSKCLFGWPR*ICLKVHVVSCKSLAT 498
Score = 40.0 bits (81), Expect(3) = 6e-023
Identities = 19/23 (82%), Positives = 19/23 (82%)
Frame = -2 / -2
Query: 126 AWRRSTENPP*VLVSEAVNVLQK 58
A RR TENPP*VLVS AV VLQK
Sbjct: 443 AARRGTENPP*VLVSLAVRVLQK 375
Score = 40.0 bits (81), Expect(3) = 2e-083
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +1 / +1
Query: 496 SPAEFVVPCDRYMESLKRNYPIGMRFKMRFKVK 594
SP+EFVVP +Y ++L +GMRF+M F+ +
Sbjct: 811 SPSEFVVPLAKYNKALYAQVSLGMRFRMMFETE 909
Score = 27.6 bits (54), Expect(3) = 6e-023
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -1 / -2
Query: 700 SSHLTLR*RHLDSAHPA*SGSTFPTMVPVNL 608
SSH T R RH + H S S P VP+ L
Sbjct: 1016 SSHPT*RLRHCEPFHLTGSRSLIPVTVPIYL 924
>gb|AY669794.1| Arabidopsis thaliana clone C105352 ARF19 (At1g19220) mRNA, complete
cds
Length = 3292
Score = 227 bits (491), Expect(3) = 2e-083
Identities = 91/146 (62%), Positives = 112/146 (76%)
Frame = +2 / +1
Query: 59 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFRGQ 238
FCKTLTASDTSTHGGFSV RR A++ PPLD + QPP QE+VAKDLH W FRHI+RGQ
Sbjct: 376 FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQ 555
Query: 239 PRRHLLQSGWSVFVSAKRLGAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSHSMH 418
P+RHLL +GWSVFVS KRL AGD+ +F+R + +L +G+RRA RQ + SSVISS SMH
Sbjct: 556 PKRHLLTTGWSVFVSTKRLFAGDSVLFVRDEKSQLMLGIRRANRQTPTLSSSVISSDSMH 735
Query: 419 LGVLATAWHAVNTGTMFTVYYKPRTS 496
+G+LA A HA + FT+++ PR S
Sbjct: 736 IGILAAAAHANANSSPFTIFFNPRAS 813
Score = 84.5 bits (178), Expect(3) = 2e-083
Identities = 34/73 (46%), Positives = 46/73 (63%)
Frame = +3 / +1
Query: 591 EEAPEQRFTGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPPP 770
E+ +R+ GT+ G D D W S+WR L+V WDE+++ RP RVS W+IEP ++P
Sbjct: 907 EDCGVRRYMGTVTGISDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIEPVITPFY 1086
Query: 771 INPLPVHRPKRPR 809
I P P RPK PR
Sbjct: 1087 ICPPPFFRPKYPR 1125
Score = 80.3 bits (169), Expect(3) = 6e-023
Identities = 44/105 (41%), Positives = 54/105 (51%)
Frame = -2 / -3
Query: 495 LVLGL**TVNMVPVLTACHAVARTPRCMLWLDITEDGTFACCLMARLTPTRSSPLSPLRK 316
L LGL V + + A A A P C+L LD+T++ CL ARL P S S L
Sbjct: 812 LALGLKKMVKGLLLALA*AAAASIPMCILSLDMTDEERVGVCLFARLIPNISCDFSSLTN 633
Query: 315 MKASPAPRRLALTKTLQPLCKRCLRG*PLNMWRKRHSTPCRSLAT 181
SPA LTKTLQP+ +CL G P + K H C+SLAT
Sbjct: 632 KTESPANSLFVLTKTLQPVVSKCLFGWPR*ICLKVHVVSCKSLAT 498
Score = 40.0 bits (81), Expect(3) = 6e-023
Identities = 19/23 (82%), Positives = 19/23 (82%)
Frame = -2 / -3
Query: 126 AWRRSTENPP*VLVSEAVNVLQK 58
A RR TENPP*VLVS AV VLQK
Sbjct: 443 AARRGTENPP*VLVSLAVRVLQK 375
Score = 40.0 bits (81), Expect(3) = 2e-083
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +1 / +1
Query: 496 SPAEFVVPCDRYMESLKRNYPIGMRFKMRFKVK 594
SP+EFVVP +Y ++L +GMRF+M F+ +
Sbjct: 811 SPSEFVVPLAKYNKALYAQVSLGMRFRMMFETE 909
Score = 27.6 bits (54), Expect(3) = 6e-023
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -1 / -3
Query: 700 SSHLTLR*RHLDSAHPA*SGSTFPTMVPVNL 608
SSH T R RH + H S S P VP+ L
Sbjct: 1016 SSHPT*RLRHCEPFHLTGSRSLIPVTVPIYL 924
>ref|NM_180715.1| Arabidopsis thaliana NPH4 (NON-PHOTOTROPHIC HYPOCOTYL); transcription
factor AT5G20730 (NPH4) transcript variant AT5G20730.1
mRNA, complete cds
Length = 4341
Score = 225 bits (485), Expect(3) = 1e-080
Identities = 93/155 (60%), Positives = 114/155 (73%)
Frame = +2 / +1
Query: 59 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFRGQ 238
FCKTLTASDTSTHGGFSV RR A++ P LD + QPP QELVAKD+H W FRHI+RGQ
Sbjct: 988 FCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQ 1167
Query: 239 PRRHLLQSGWSVFVSAKRLGAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSHSMH 418
P+RHLL +GWSVFVS KRL AGD+ +F+R +L +G+RRA RQQ + SSVISS SMH
Sbjct: 1168 PKRHLLTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMH 1347
Query: 419 LGVLATAWHAVNTGTMFTVYYKPRTSLQLSLLFPV 523
+GVLA A HA + FT++Y PR + + P+
Sbjct: 1348 IGVLAAAAHANANNSPFTIFYNPRWAAPAEFVVPL 1452
Score = 89.0 bits (188), Expect(2) = 1e-022
Identities = 49/103 (47%), Positives = 57/103 (55%)
Frame = -2 / -2
Query: 489 LGL**TVNMVPVLTACHAVARTPRCMLWLDITEDGTFACCLMARLTPTRSSPLSPLRKMK 310
LGL* V + + A A ARTP CML LDIT++ + CCL ARL P RS L K
Sbjct: 1418 LGL*KMVKGLLLALA*AAAARTPMCMLSLDITDEESAGCCLFARLIPNRSCAFPSLIKRT 1239
Query: 309 ASPAPRRLALTKTLQPLCKRCLRG*PLNMWRKRHSTPCRSLAT 181
SPA LT TLQP+ +CL G*P + K H SLAT
Sbjct: 1238 ESPAKSLFVLTNTLQPVVSKCLFG*PR*ICLKVHVLS*ISLAT 1110
Score = 79.0 bits (166), Expect(3) = 1e-080
Identities = 31/70 (44%), Positives = 43/70 (61%)
Frame = +3 / +1
Query: 591 EEAPEQRFTGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPPP 770
EE +R+ GT+ G D D W S+WR L++ WDE+++ RP RVS W IEP ++P
Sbjct: 1522 EECGVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLTPFY 1701
Query: 771 INPLPVHRPK 800
I P P RP+
Sbjct: 1702 ICPPPFFRPR 1731
Score = 40.0 bits (81), Expect(2) = 1e-022
Identities = 19/23 (82%), Positives = 19/23 (82%)
Frame = -2 / -2
Query: 126 AWRRSTENPP*VLVSEAVNVLQK 58
A RR TENPP*VLVS AV VLQK
Sbjct: 1055 AARRGTENPP*VLVSLAVRVLQK 987
Score = 38.6 bits (78), Expect(3) = 1e-080
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +1 / +1
Query: 496 SPAEFVVPCDRYMESLKRNYPIGMRFKMRFKVK 594
+PAEFVVP +Y +++ +GMRF+M F+ +
Sbjct: 1426 APAEFVVPLAKYTKAMYAQVSLGMRFRMIFETE 1524
>ref|NM_122080.2| Arabidopsis thaliana NPH4 (NON-PHOTOTROPHIC HYPOCOTYL); transcription
factor AT5G20730 (NPH4) transcript variant AT5G20730.3
mRNA, complete cds
Length = 4296
Score = 225 bits (485), Expect(3) = 1e-080
Identities = 93/155 (60%), Positives = 114/155 (73%)
Frame = +2 / +1
Query: 59 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFRGQ 238
FCKTLTASDTSTHGGFSV RR A++ P LD + QPP QELVAKD+H W FRHI+RGQ
Sbjct: 988 FCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQ 1167
Query: 239 PRRHLLQSGWSVFVSAKRLGAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSHSMH 418
P+RHLL +GWSVFVS KRL AGD+ +F+R +L +G+RRA RQQ + SSVISS SMH
Sbjct: 1168 PKRHLLTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMH 1347
Query: 419 LGVLATAWHAVNTGTMFTVYYKPRTSLQLSLLFPV 523
+GVLA A HA + FT++Y PR + + P+
Sbjct: 1348 IGVLAAAAHANANNSPFTIFYNPRWAAPAEFVVPL 1452
Score = 89.0 bits (188), Expect(2) = 1e-022
Identities = 49/103 (47%), Positives = 57/103 (55%)
Frame = -2 / -2
Query: 489 LGL**TVNMVPVLTACHAVARTPRCMLWLDITEDGTFACCLMARLTPTRSSPLSPLRKMK 310
LGL* V + + A A ARTP CML LDIT++ + CCL ARL P RS L K
Sbjct: 1418 LGL*KMVKGLLLALA*AAAARTPMCMLSLDITDEESAGCCLFARLIPNRSCAFPSLIKRT 1239
Query: 309 ASPAPRRLALTKTLQPLCKRCLRG*PLNMWRKRHSTPCRSLAT 181
SPA LT TLQP+ +CL G*P + K H SLAT
Sbjct: 1238 ESPAKSLFVLTNTLQPVVSKCLFG*PR*ICLKVHVLS*ISLAT 1110
Score = 79.0 bits (166), Expect(3) = 1e-080
Identities = 31/70 (44%), Positives = 43/70 (61%)
Frame = +3 / +1
Query: 591 EEAPEQRFTGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPPP 770
EE +R+ GT+ G D D W S+WR L++ WDE+++ RP RVS W IEP ++P
Sbjct: 1522 EECGVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLTPFY 1701
Query: 771 INPLPVHRPK 800
I P P RP+
Sbjct: 1702 ICPPPFFRPR 1731
Score = 40.0 bits (81), Expect(2) = 1e-022
Identities = 19/23 (82%), Positives = 19/23 (82%)
Frame = -2 / -2
Query: 126 AWRRSTENPP*VLVSEAVNVLQK 58
A RR TENPP*VLVS AV VLQK
Sbjct: 1055 AARRGTENPP*VLVSLAVRVLQK 987
Score = 38.6 bits (78), Expect(3) = 1e-080
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +1 / +1
Query: 496 SPAEFVVPCDRYMESLKRNYPIGMRFKMRFKVK 594
+PAEFVVP +Y +++ +GMRF+M F+ +
Sbjct: 1426 APAEFVVPLAKYTKAMYAQVSLGMRFRMIFETE 1524
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 2,464,737,976
Number of Sequences: 1013581
Number of extensions: 36114639
Number of successful extensions: 274184
Number of sequences better than 1.0e-020: 190
length of database: 302,980,290
effective HSP length: 57
effective length of database: 245,206,173
effective search space used: 77730356841
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)