TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2646712.2.1
(581 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AV784273.1|AV784273 AV784273 RAFL5 Arabidopsis thaliana ... 114 3e-024
gb|AV517903.1|AV517903 AV517903 Arabidopsis thaliana aboveg... 114 3e-024
gb|AV538045.1|AV538045 AV538045 Arabidopsis thaliana roots ... 114 3e-024
gb|AV539977.1|AV539977 AV539977 Arabidopsis thaliana roots ... 114 3e-024
gb|AV543473.1|AV543473 AV543473 Arabidopsis thaliana roots ... 114 3e-024
gb|AF321114.1|AF321114 Arabidopsis thaliana cinnamoyl-CoA r... 114 3e-024
gb|AY087316.1| Arabidopsis thaliana clone 34141 mRNA, compl... 114 3e-024
gb|AF332459.1| Arabidopsis thaliana clone C00167 (e) putati... 114 3e-024
emb|BX815831.1|CNS0AAHT Arabidopsis thaliana Full-length cD... 114 3e-024
emb|BX815700.1|CNS0ABD9 Arabidopsis thaliana Full-length cD... 114 3e-024
emb|BX815739.1|CNS0ABDT Arabidopsis thaliana Full-length cD... 114 3e-024
emb|BX815742.1|CNS0ABF5 Arabidopsis thaliana Full-length cD... 114 3e-024
emb|BX816709.1|CNS0ABPI Arabidopsis thaliana Full-length cD... 114 3e-024
emb|BX813775.1|CNS0AC0E Arabidopsis thaliana Full-length cD... 114 3e-024
ref|NM_101463.2| Arabidopsis thaliana CCR1 (CINNAMOYL COA R... 114 3e-024
gb|AY743921.1| Arabidopsis thaliana cinnamoyl CoA reductase... 114 3e-024
gb|AI995837.1|AI995837 701548853 A. thaliana, Columbia Col-... 113 4e-024
gb|BT005826.1| Arabidopsis thaliana At1g80820 gene, complet... 113 5e-024
emb|BX818421.1|CNS0AE73 Arabidopsis thaliana Full-length cD... 113 5e-024
emb|CQ805268.1| Sequence 1679 from Patent WO2004035798 113 5e-024
ref|NM_106730.2| Arabidopsis thaliana CCR2 (CINNAMOYL COA R... 113 5e-024
gb|CB185614.1|CB185614 EST00539 Arabidopsis avirulent Pseud... 111 8e-024
gb|AY087148.1| Arabidopsis thaliana clone 32255 mRNA, compl... 111 1e-023
gb|AV517929.1|AV517929 AV517929 Arabidopsis thaliana aboveg... 111 3e-023
gb|AF320624.1|AF320624 Arabidopsis thaliana cinnamoyl CoA r... 109 7e-023
gb|AF320623.1|AF320623 Arabidopsis thaliana cinnamoyl CoA r... 108 1e-022
>gb|AV784273.1|AV784273 AV784273 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-17-P18 3',
mRNA sequence
Length = 700
Score = 114 bits (243), Expect = 3e-024
Identities = 44/79 (55%), Positives = 58/79 (73%)
Frame = -1 / -3
Query: 578 AAGRYICADAVLHREDVVRTLRKSFPGYPVPERCSDEVNPRKQPYKISNQRLRELGLEFT 399
A+GRY+ A++ HR +VV L K FP YP+P +C DE NPR +PYK +NQ++++LGLEFT
Sbjct: 512 ASGRYLLAESARHRGEVVEILAKLFPEYPLPTKCKDEKNPRAKPYKFTNQKIKDLGLEFT 333
Query: 398 PAAQALYDTVVCFQEKGIL 342
Q+LYDTV QEKG L
Sbjct: 332 STKQSLYDTVKSLQEKGHL 276
>gb|AV517903.1|AV517903 AV517903 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APD02b10F 3', mRNA
sequence
Length = 546
Score = 114 bits (243), Expect = 3e-024
Identities = 44/79 (55%), Positives = 58/79 (73%)
Frame = -1 / -3
Query: 578 AAGRYICADAVLHREDVVRTLRKSFPGYPVPERCSDEVNPRKQPYKISNQRLRELGLEFT 399
A+GRY+ A++ HR +VV L K FP YP+P +C DE NPR +PYK +NQ++++LGLEFT
Sbjct: 514 ASGRYLLAESARHRGEVVEILAKLFPEYPLPTKCKDEKNPRAKPYKFTNQKIKDLGLEFT 335
Query: 398 PAAQALYDTVVCFQEKGIL 342
Q+LYDTV QEKG L
Sbjct: 334 STKQSLYDTVKSLQEKGHL 278
>gb|AV538045.1|AV538045 AV538045 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ109e03F 3', mRNA sequence
Length = 591
Score = 114 bits (243), Expect = 3e-024
Identities = 44/79 (55%), Positives = 58/79 (73%)
Frame = -1 / -3
Query: 578 AAGRYICADAVLHREDVVRTLRKSFPGYPVPERCSDEVNPRKQPYKISNQRLRELGLEFT 399
A+GRY+ A++ HR +VV L K FP YP+P +C DE NPR +PYK +NQ++++LGLEFT
Sbjct: 514 ASGRYLLAESARHRGEVVEILAKLFPEYPLPTKCKDEKNPRAKPYKFTNQKIKDLGLEFT 335
Query: 398 PAAQALYDTVVCFQEKGIL 342
Q+LYDTV QEKG L
Sbjct: 334 STKQSLYDTVKSLQEKGHL 278
>gb|AV539977.1|AV539977 AV539977 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ142e12F 3', mRNA sequence
Length = 612
Score = 114 bits (243), Expect = 3e-024
Identities = 44/79 (55%), Positives = 58/79 (73%)
Frame = -1 / -1
Query: 578 AAGRYICADAVLHREDVVRTLRKSFPGYPVPERCSDEVNPRKQPYKISNQRLRELGLEFT 399
A+GRY+ A++ HR +VV L K FP YP+P +C DE NPR +PYK +NQ++++LGLEFT
Sbjct: 534 ASGRYLLAESARHRGEVVEILAKLFPEYPLPTKCKDEKNPRAKPYKFTNQKIKDLGLEFT 355
Query: 398 PAAQALYDTVVCFQEKGIL 342
Q+LYDTV QEKG L
Sbjct: 354 STKQSLYDTVKSLQEKGHL 298
>gb|AV543473.1|AV543473 AV543473 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ201b08F 3', mRNA sequence
Length = 520
Score = 114 bits (243), Expect = 3e-024
Identities = 44/79 (55%), Positives = 58/79 (73%)
Frame = -1 / -2
Query: 578 AAGRYICADAVLHREDVVRTLRKSFPGYPVPERCSDEVNPRKQPYKISNQRLRELGLEFT 399
A+GRY+ A++ HR +VV L K FP YP+P +C DE NPR +PYK +NQ++++LGLEFT
Sbjct: 492 ASGRYLLAESARHRGEVVEILAKLFPEYPLPTKCKDEKNPRAKPYKFTNQKIKDLGLEFT 313
Query: 398 PAAQALYDTVVCFQEKGIL 342
Q+LYDTV QEKG L
Sbjct: 312 STKQSLYDTVKSLQEKGHL 256
>gb|AF321114.1|AF321114 Arabidopsis thaliana cinnamoyl-CoA reductase mRNA, complete cds
Length = 1035
Score = 114 bits (243), Expect = 3e-024
Identities = 44/79 (55%), Positives = 58/79 (73%)
Frame = -1 / +1
Query: 578 AAGRYICADAVLHREDVVRTLRKSFPGYPVPERCSDEVNPRKQPYKISNQRLRELGLEFT 399
A+GRY+ A++ HR +VV L K FP YP+P +C DE NPR +PYK +NQ++++LGLEFT
Sbjct: 730 ASGRYLLAESARHRGEVVEILAKLFPEYPLPTKCKDEKNPRAKPYKFTNQKIKDLGLEFT 909
Query: 398 PAAQALYDTVVCFQEKGIL 342
Q+LYDTV QEKG L
Sbjct: 910 STKQSLYDTVKSLQEKGHL 966
>gb|AY087316.1| Arabidopsis thaliana clone 34141 mRNA, complete sequence
Length = 1370
Score = 114 bits (243), Expect = 3e-024
Identities = 44/79 (55%), Positives = 58/79 (73%)
Frame = -1 / +1
Query: 578 AAGRYICADAVLHREDVVRTLRKSFPGYPVPERCSDEVNPRKQPYKISNQRLRELGLEFT 399
A+GRY+ A++ HR +VV L K FP YP+P +C DE NPR +PYK +NQ++++LGLEFT
Sbjct: 832 ASGRYLLAESARHRGEVVEILAKLFPEYPLPTKCKDEKNPRAKPYKFTNQKIKDLGLEFT 1011
Query: 398 PAAQALYDTVVCFQEKGIL 342
Q+LYDTV QEKG L
Sbjct: 1012 STKQSLYDTVKSLQEKGHL 1068
>gb|AF332459.1| Arabidopsis thaliana clone C00167 (e) putative cinnamoyl CoA
reductase (At1g15950) mRNA, complete cds
Length = 1035
Score = 114 bits (243), Expect = 3e-024
Identities = 44/79 (55%), Positives = 58/79 (73%)
Frame = -1 / +1
Query: 578 AAGRYICADAVLHREDVVRTLRKSFPGYPVPERCSDEVNPRKQPYKISNQRLRELGLEFT 399
A+GRY+ A++ HR +VV L K FP YP+P +C DE NPR +PYK +NQ++++LGLEFT
Sbjct: 730 ASGRYLLAESARHRGEVVEILAKLFPEYPLPTKCKDEKNPRAKPYKFTNQKIKDLGLEFT 909
Query: 398 PAAQALYDTVVCFQEKGIL 342
Q+LYDTV QEKG L
Sbjct: 910 STKQSLYDTVKSLQEKGHL 966
>emb|BX815831.1|CNS0AAHT Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH11ZC11 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1305
Score = 114 bits (243), Expect = 3e-024
Identities = 44/79 (55%), Positives = 58/79 (73%)
Frame = -1 / +1
Query: 578 AAGRYICADAVLHREDVVRTLRKSFPGYPVPERCSDEVNPRKQPYKISNQRLRELGLEFT 399
A+GRY+ A++ HR +VV L K FP YP+P +C DE NPR +PYK +NQ++++LGLEFT
Sbjct: 811 ASGRYLLAESARHRGEVVEILAKLFPEYPLPTKCKDEKNPRAKPYKFTNQKIKDLGLEFT 990
Query: 398 PAAQALYDTVVCFQEKGIL 342
Q+LYDTV QEKG L
Sbjct: 991 STKQSLYDTVKSLQEKGHL 1047
>emb|BX815700.1|CNS0ABD9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS85ZF05 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1314
Score = 114 bits (243), Expect = 3e-024
Identities = 44/79 (55%), Positives = 58/79 (73%)
Frame = -1 / +2
Query: 578 AAGRYICADAVLHREDVVRTLRKSFPGYPVPERCSDEVNPRKQPYKISNQRLRELGLEFT 399
A+GRY+ A++ HR +VV L K FP YP+P +C DE NPR +PYK +NQ++++LGLEFT
Sbjct: 812 ASGRYLLAESARHRGEVVEILAKLFPEYPLPTKCKDEKNPRAKPYKFTNQKIKDLGLEFT 991
Query: 398 PAAQALYDTVVCFQEKGIL 342
Q+LYDTV QEKG L
Sbjct: 992 STKQSLYDTVKSLQEKGHL 1048
>emb|BX815739.1|CNS0ABDT Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS8ZE04 of Adult vegetative tissue of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1292
Score = 114 bits (243), Expect = 3e-024
Identities = 44/79 (55%), Positives = 58/79 (73%)
Frame = -1 / +2
Query: 578 AAGRYICADAVLHREDVVRTLRKSFPGYPVPERCSDEVNPRKQPYKISNQRLRELGLEFT 399
A+GRY+ A++ HR +VV L K FP YP+P +C DE NPR +PYK +NQ++++LGLEFT
Sbjct: 785 ASGRYLLAESARHRGEVVEILAKLFPEYPLPTKCKDEKNPRAKPYKFTNQKIKDLGLEFT 964
Query: 398 PAAQALYDTVVCFQEKGIL 342
Q+LYDTV QEKG L
Sbjct: 965 STKQSLYDTVKSLQEKGHL 1021
>emb|BX815742.1|CNS0ABF5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS8ZF03 of Adult vegetative tissue of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1338
Score = 114 bits (243), Expect = 3e-024
Identities = 44/79 (55%), Positives = 58/79 (73%)
Frame = -1 / +2
Query: 578 AAGRYICADAVLHREDVVRTLRKSFPGYPVPERCSDEVNPRKQPYKISNQRLRELGLEFT 399
A+GRY+ A++ HR +VV L K FP YP+P +C DE NPR +PYK +NQ++++LGLEFT
Sbjct: 812 ASGRYLLAESARHRGEVVEILAKLFPEYPLPTKCKDEKNPRAKPYKFTNQKIKDLGLEFT 991
Query: 398 PAAQALYDTVVCFQEKGIL 342
Q+LYDTV QEKG L
Sbjct: 992 STKQSLYDTVKSLQEKGHL 1048
>emb|BX816709.1|CNS0ABPI Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH64ZG07 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1291
Score = 114 bits (243), Expect = 3e-024
Identities = 44/79 (55%), Positives = 58/79 (73%)
Frame = -1 / +2
Query: 578 AAGRYICADAVLHREDVVRTLRKSFPGYPVPERCSDEVNPRKQPYKISNQRLRELGLEFT 399
A+GRY+ A++ HR +VV L K FP YP+P +C DE NPR +PYK +NQ++++LGLEFT
Sbjct: 785 ASGRYLLAESARHRGEVVEILAKLFPEYPLPTKCKDEKNPRAKPYKFTNQKIKDLGLEFT 964
Query: 398 PAAQALYDTVVCFQEKGIL 342
Q+LYDTV QEKG L
Sbjct: 965 STKQSLYDTVKSLQEKGHL 1021
>emb|BX813775.1|CNS0AC0E Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB39ZD03 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1366
Score = 114 bits (243), Expect = 3e-024
Identities = 44/79 (55%), Positives = 58/79 (73%)
Frame = -1 / +3
Query: 578 AAGRYICADAVLHREDVVRTLRKSFPGYPVPERCSDEVNPRKQPYKISNQRLRELGLEFT 399
A+GRY+ A++ HR +VV L K FP YP+P +C DE NPR +PYK +NQ++++LGLEFT
Sbjct: 813 ASGRYLLAESARHRGEVVEILAKLFPEYPLPTKCKDEKNPRAKPYKFTNQKIKDLGLEFT 992
Query: 398 PAAQALYDTVVCFQEKGIL 342
Q+LYDTV QEKG L
Sbjct: 993 STKQSLYDTVKSLQEKGHL 1049
>ref|NM_101463.2| Arabidopsis thaliana CCR1 (CINNAMOYL COA REDUCTASE 1) AT1G15950
(CCR1) mRNA, complete cds
Length = 1386
Score = 114 bits (243), Expect = 3e-024
Identities = 44/79 (55%), Positives = 58/79 (73%)
Frame = -1 / +3
Query: 578 AAGRYICADAVLHREDVVRTLRKSFPGYPVPERCSDEVNPRKQPYKISNQRLRELGLEFT 399
A+GRY+ A++ HR +VV L K FP YP+P +C DE NPR +PYK +NQ++++LGLEFT
Sbjct: 831 ASGRYLLAESARHRGEVVEILAKLFPEYPLPTKCKDEKNPRAKPYKFTNQKIKDLGLEFT 1010
Query: 398 PAAQALYDTVVCFQEKGIL 342
Q+LYDTV QEKG L
Sbjct: 1011 STKQSLYDTVKSLQEKGHL 1067
>gb|AY743921.1| Arabidopsis thaliana cinnamoyl CoA reductase 1 (ccr1) mRNA,
complete cds
Length = 1035
Score = 114 bits (243), Expect = 3e-024
Identities = 44/79 (55%), Positives = 58/79 (73%)
Frame = -1 / +1
Query: 578 AAGRYICADAVLHREDVVRTLRKSFPGYPVPERCSDEVNPRKQPYKISNQRLRELGLEFT 399
A+GRY+ A++ HR +VV L K FP YP+P +C DE NPR +PYK +NQ++++LGLEFT
Sbjct: 730 ASGRYLLAESARHRGEVVEILAKLFPEYPLPTKCKDEKNPRAKPYKFTNQKIKDLGLEFT 909
Query: 398 PAAQALYDTVVCFQEKGIL 342
Q+LYDTV QEKG L
Sbjct: 910 STKQSLYDTVKSLQEKGHL 966
>gb|AI995837.1|AI995837 701548853 A. thaliana, Columbia Col-0, inflorescence-2 Arabidopsis
thaliana cDNA clone 701548853, mRNA sequence
Length = 562
Score = 113 bits (242), Expect = 4e-024
Identities = 43/77 (55%), Positives = 57/77 (74%)
Frame = -1 / -2
Query: 578 AAGRYICADAVLHREDVVRTLRKSFPGYPVPERCSDEVNPRKQPYKISNQRLRELGLEFT 399
A+GRY+ A++ HR +VV L K FP YP+P +C DE NPR +PYK +NQ++++LGLEFT
Sbjct: 531 ASGRYLLAESARHRGEVVEILAKLFPEYPLPTKCKDEKNPRAKPYKFTNQKIKDLGLEFT 352
Query: 398 PAAQALYDTVVCFQEKG 348
Q+LYDTV QEKG
Sbjct: 351 STKQSLYDTVKSLQEKG 301
>gb|BT005826.1| Arabidopsis thaliana At1g80820 gene, complete cds
Length = 999
Score = 113 bits (241), Expect = 5e-024
Identities = 44/79 (55%), Positives = 58/79 (73%)
Frame = -1 / +1
Query: 578 AAGRYICADAVLHREDVVRTLRKSFPGYPVPERCSDEVNPRKQPYKISNQRLRELGLEFT 399
A+GRYI A+ LHR +VV L K FP YP+P +CSDE NPR +PYK + Q++++LGLEF
Sbjct: 715 ASGRYILAETALHRGEVVEILAKFFPEYPLPTKCSDEKNPRAKPYKFTTQKIKDLGLEFK 894
Query: 398 PAAQALYDTVVCFQEKGIL 342
P Q+LY++V QEKG L
Sbjct: 895 PIKQSLYESVKSLQEKGHL 951
>emb|BX818421.1|CNS0AE73 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL78ZC05 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 646
Score = 113 bits (241), Expect = 5e-024
Identities = 44/79 (55%), Positives = 58/79 (73%)
Frame = -1 / +2
Query: 578 AAGRYICADAVLHREDVVRTLRKSFPGYPVPERCSDEVNPRKQPYKISNQRLRELGLEFT 399
A+GRYI A+ LHR +VV L K FP YP+P +CSDE NPR +PYK + Q++++LGLEF
Sbjct: 152 ASGRYILAETALHRGEVVEILAKFFPEYPLPTKCSDEKNPRAKPYKFTTQKIKDLGLEFK 331
Query: 398 PAAQALYDTVVCFQEKGIL 342
P Q+LY++V QEKG L
Sbjct: 332 PIKQSLYESVKSLQEKGHL 388
>emb|CQ805268.1| Sequence 1679 from Patent WO2004035798
Length = 999
Score = 113 bits (241), Expect = 5e-024
Identities = 44/79 (55%), Positives = 58/79 (73%)
Frame = -1 / +1
Query: 578 AAGRYICADAVLHREDVVRTLRKSFPGYPVPERCSDEVNPRKQPYKISNQRLRELGLEFT 399
A+GRYI A+ LHR +VV L K FP YP+P +CSDE NPR +PYK + Q++++LGLEF
Sbjct: 715 ASGRYILAETALHRGEVVEILAKFFPEYPLPTKCSDEKNPRAKPYKFTTQKIKDLGLEFK 894
Query: 398 PAAQALYDTVVCFQEKGIL 342
P Q+LY++V QEKG L
Sbjct: 895 PIKQSLYESVKSLQEKGHL 951
>ref|NM_106730.2| Arabidopsis thaliana CCR2 (CINNAMOYL COA REDUCTASE) AT1G80820 (CCR2)
mRNA, complete cds
Length = 1282
Score = 113 bits (241), Expect = 5e-024
Identities = 44/79 (55%), Positives = 58/79 (73%)
Frame = -1 / +2
Query: 578 AAGRYICADAVLHREDVVRTLRKSFPGYPVPERCSDEVNPRKQPYKISNQRLRELGLEFT 399
A+GRYI A+ LHR +VV L K FP YP+P +CSDE NPR +PYK + Q++++LGLEF
Sbjct: 788 ASGRYILAETALHRGEVVEILAKFFPEYPLPTKCSDEKNPRAKPYKFTTQKIKDLGLEFK 967
Query: 398 PAAQALYDTVVCFQEKGIL 342
P Q+LY++V QEKG L
Sbjct: 968 PIKQSLYESVKSLQEKGHL 1024
>gb|CB185614.1|CB185614 EST00539 Arabidopsis avirulent Pseudomonas syringae subtracted
library Arabidopsis thaliana cDNA clone RPM3-B10 similar
to cinnamoyl CoA reductase, mRNA sequence
Length = 409
Score = 111 bits (238), Expect(2) = 8e-024
Identities = 43/77 (55%), Positives = 56/77 (72%)
Frame = -1 / -2
Query: 572 GRYICADAVLHREDVVRTLRKSFPGYPVPERCSDEVNPRKQPYKISNQRLRELGLEFTPA 393
GRY+ A++ HR +VV L K FP YP+P +C DE NPR +PYK +NQ++++LGLEFT
Sbjct: 408 GRYLLAESARHRGEVVEILAKLFPEYPLPTKCKDEKNPRAKPYKFTNQKIKDLGLEFTST 229
Query: 392 AQALYDTVVCFQEKGIL 342
Q+LYDTV QEKG L
Sbjct: 228 KQSLYDTVKSLQEKGHL 178
Score = 19.9 bits (37), Expect(2) = 8e-024
Identities = 5/14 (35%), Positives = 9/14 (64%)
Frame = -1 / -3
Query: 119 FICCYIMCDNLLII 78
F+CC +C+ + I
Sbjct: 50 FVCCLWLCETSVSI 9
>gb|AY087148.1| Arabidopsis thaliana clone 32255 mRNA, complete sequence
Length = 1272
Score = 111 bits (238), Expect = 1e-023
Identities = 44/79 (55%), Positives = 57/79 (72%)
Frame = -1 / +2
Query: 578 AAGRYICADAVLHREDVVRTLRKSFPGYPVPERCSDEVNPRKQPYKISNQRLRELGLEFT 399
A+GRYI A+ LHR +VV L K FP YP+P +CSDE NPR +PYK + Q++++LGLEF
Sbjct: 788 ASGRYILAETALHRGEVVEILAKFFPEYPLPTKCSDEKNPRAKPYKFTTQKIKDLGLEFK 967
Query: 398 PAAQALYDTVVCFQEKGIL 342
P Q+LY+ V QEKG L
Sbjct: 968 PIKQSLYEYVKSLQEKGHL 1024
>gb|AV517929.1|AV517929 AV517929 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APD03a03F 3', mRNA
sequence
Length = 619
Score = 111 bits (236), Expect = 3e-023
Identities = 43/79 (54%), Positives = 57/79 (72%)
Frame = -1 / -2
Query: 578 AAGRYICADAVLHREDVVRTLRKSFPGYPVPERCSDEVNPRKQPYKISNQRLRELGLEFT 399
A+GRY+ A++ H +VV L K FP YP+P +C DE NPR +PYK +NQ++++LGLEFT
Sbjct: 552 ASGRYLLAESARHLGEVVEILAKLFPEYPLPTKCKDEKNPRAKPYKFTNQKIKDLGLEFT 373
Query: 398 PAAQALYDTVVCFQEKGIL 342
Q+LYDTV QEKG L
Sbjct: 372 STKQSLYDTVKSLQEKGHL 316
>gb|AF320624.1|AF320624 Arabidopsis thaliana cinnamoyl CoA reductase isoform 1 (CCR1) mRNA,
complete cds
Length = 1269
Score = 109 bits (233), Expect = 7e-023
Identities = 42/79 (53%), Positives = 56/79 (70%)
Frame = -1 / +1
Query: 578 AAGRYICADAVLHREDVVRTLRKSFPGYPVPERCSDEVNPRKQPYKISNQRLRELGLEFT 399
A+GRY+ A++ HR +VV L K FP YP+P +C DE NPR +PYK +NQ++++LGLE T
Sbjct: 730 ASGRYLLAESARHRGEVVEILAKLFPEYPLPTKCKDEKNPRAKPYKFTNQKIKDLGLELT 909
Query: 398 PAAQALYDTVVCFQEKGIL 342
Q+ YDTV QEKG L
Sbjct: 910 STKQSFYDTVKSLQEKGHL 966
>gb|AF320623.1|AF320623 Arabidopsis thaliana cinnamoyl CoA reductase CCR2 mRNA, complete cds
Length = 1216
Score = 108 bits (231), Expect = 1e-022
Identities = 43/79 (54%), Positives = 57/79 (72%)
Frame = -1 / +3
Query: 578 AAGRYICADAVLHREDVVRTLRKSFPGYPVPERCSDEVNPRKQPYKISNQRLRELGLEFT 399
A+GRYI A+ L R +VV L K FP YP+P +CSDE NPR +PYK + Q++++LGLEF
Sbjct: 777 ASGRYIFAETALDRGEVVEILAKFFPEYPLPTKCSDEKNPRAKPYKFTTQKIKDLGLEFK 956
Query: 398 PAAQALYDTVVCFQEKGIL 342
P Q+LY++V QEKG L
Sbjct: 957 PIKQSLYESVKSLQEKGHL 1013
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 965,101,130
Number of Sequences: 1013581
Number of extensions: 12522948
Number of successful extensions: 186950
Number of sequences better than 1.0e-020: 27
length of database: 302,980,290
effective HSP length: 55
effective length of database: 247,233,335
effective search space used: 34118200230
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)