TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2623104.2.4
(1628 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|NM_111663.2| Arabidopsis thaliana polygalacturonase AT3... 324 2e-098
emb|AJ005584.1|ATH005584 Arabidopsis thaliana mRNA for poly... 320 7e-097
gb|AY065239.1| Arabidopsis thaliana putative polygalacturon... 319 1e-096
ref|NM_111661.2| Arabidopsis thaliana polygalacturonase AT3... 319 1e-096
gb|AY087578.1| Arabidopsis thaliana clone 36765 mRNA, compl... 319 1e-096
gb|AY096534.1| Arabidopsis thaliana putative polygalacturon... 319 1e-096
emb|BX823174.1|CNS0A74O Arabidopsis thaliana Full-length cD... 315 2e-095
gb|AY089015.1| Arabidopsis thaliana clone 16377 mRNA, compl... 319 2e-094
ref|NM_111662.2| Arabidopsis thaliana polygalacturonase AT3... 316 2e-094
emb|X73222.1|ATEGP A.thaliana mRNA for exopolygalacturonase 190 4e-094
dbj|AK118684.1| Arabidopsis thaliana At5g48140 mRNA for put... 317 6e-094
ref|NM_124188.2| Arabidopsis thaliana polygalacturonase AT5... 317 6e-094
gb|BT009687.1| Arabidopsis thaliana At5g48140 mRNA, complet... 317 6e-094
ref|NM_112258.2| Arabidopsis thaliana polygalacturonase AT3... 188 1e-093
emb|X72292.1|ATEXOPB A.thaliana (clone GBGa483) mRNA for ex... 189 1e-093
gb|AY056173.1| Arabidopsis thaliana putative exopolygalactu... 189 7e-093
ref|NM_111664.1| Arabidopsis thaliana polygalacturonase AT3... 189 7e-093
gb|AY091200.1| Arabidopsis thaliana putative exopolygalactu... 189 7e-093
ref|NM_128875.1| Arabidopsis thaliana polygalacturonase AT2... 254 5e-092
gb|AY062447.1| Arabidopsis thaliana polygalacturonase; pect... 188 9e-092
gb|AY114635.1| Arabidopsis thaliana polygalacturonase; pect... 188 9e-092
ref|NM_117928.1| Arabidopsis thaliana polygalacturonase AT4... 311 1e-091
gb|AF428425.1|AF428425 Arabidopsis thaliana At1g02790/T14P4... 212 6e-091
ref|NM_100158.1| Arabidopsis thaliana PGA4 (POLYGALACTURONA... 212 6e-091
gb|AY065210.1| Arabidopsis thaliana putative polygalacturon... 212 6e-091
emb|X72291.1|ATEXOPA A.thaliana (clone GBGe184) mRNA for ex... 212 6e-091
gb|AY133812.1| Arabidopsis thaliana clone U18487 putative p... 212 6e-091
ref|NM_101576.1| Arabidopsis thaliana polygalacturonase AT1... 278 8e-091
ref|NM_106487.2| Arabidopsis thaliana polygalacturonase AT1... 275 3e-090
ref|NM_128219.1| Arabidopsis thaliana polygalacturonase AT2... 305 1e-089
emb|BX822574.1|CNS0A73L Arabidopsis thaliana Full-length cD... 298 4e-089
emb|AJ003135.1|ATAJ3135 Arabidopsis thaliana PGA5 gene, com... 215 5e-089
gb|AC013483.7|ATAC013483 Arabidopsis thaliana chromosome II... 215 6e-089
ref|NM_103464.1| Arabidopsis thaliana polygalacturonase AT1... 258 2e-085
gb|DQ056483.1| Arabidopsis thaliana glycoside hydrolase fam... 257 4e-085
ref|NM_103463.1| Arabidopsis thaliana polygalacturonase AT1... 257 4e-085
ref|NM_127106.1| Arabidopsis thaliana polygalacturonase AT2... 257 1e-084
ref|NM_129589.1| Arabidopsis thaliana polygalacturonase AT2... 253 2e-084
ref|NM_127105.1| Arabidopsis thaliana polygalacturonase AT2... 256 3e-084
ref|NM_103465.1| Arabidopsis thaliana polygalacturonase AT1... 258 5e-084
emb|BX819999.1|CNS0AA2M Arabidopsis thaliana Full-length cD... 252 7e-084
ref|NM_117450.1| Arabidopsis thaliana polygalacturonase AT4... 256 7e-084
emb|BX823616.1|CNS0A4Y3 Arabidopsis thaliana Full-length cD... 161 7e-084
ref|NM_127107.2| Arabidopsis thaliana polygalacturonase AT2... 255 3e-082
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 183 1e-081
gb|AC022521.4|AC022521 Arabidopsis thaliana chromosome I BA... 160 1e-081
gb|AC009525.3| Arabidopsis thaliana chromosome I BAC F22D16... 160 1e-081
emb|Y16230.1|ATPGA3GE Arabidopsis thaliana PGA3 gene 160 1e-081
dbj|AB023039.1| Arabidopsis thaliana genomic DNA, chromosom... 220 3e-077
gb|AC002334.3| Arabidopsis thaliana chromosome 2 clone F25I... 149 6e-077
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 216 1e-075
emb|AL161548.2|ATCHRIV48 Arabidopsis thaliana DNA chromosom... 115 2e-075
emb|AL021713.1|ATT9A21 Arabidopsis thaliana DNA chromosome ... 115 2e-075
emb|AL110123.1|ATF15J5 Arabidopsis thaliana DNA chromosome ... 115 2e-075
emb|AX507825.1| Sequence 2520 from Patent WO0216655 141 1e-073
ref|NM_100446.1| Arabidopsis thaliana polygalacturonase AT1... 141 1e-073
gb|AC026757.12|AC026757 Arabidopsis thaliana chromosome 1 B... 216 4e-073
gb|AC002505.3| Arabidopsis thaliana chromosome 2 clone T9J2... 219 1e-072
emb|AJ223189.1|ATAJ3189 Arabidopsis thaliana PGA2 gene 161 2e-072
gb|AC006920.11| Arabidopsis thaliana chromosome 2 clone F26... 218 3e-072
gb|AC007020.5| Arabidopsis thaliana chromosome 2 clone T3G2... 211 3e-072
gb|AF085279.1|AF085279 Arabidopsis thaliana ABA-regulated g... 211 5e-072
ref|NM_100445.1| Arabidopsis thaliana polygalacturonase AT1... 133 5e-072
emb|AL035528.2|ATF18A5 Arabidopsis thaliana DNA chromosome ... 216 3e-071
ref|NM_129950.1| Arabidopsis thaliana polygalacturonase AT2... 141 6e-071
gb|DQ056578.1| Arabidopsis thaliana putative polygalacturon... 145 8e-071
ref|NM_129951.1| Arabidopsis thaliana polygalacturonase AT2... 145 8e-071
emb|AL161537.2|ATCHRIV37 Arabidopsis thaliana DNA chromosom... 216 1e-070
dbj|AK117953.1| Arabidopsis thaliana At3g07830 mRNA for put... 268 4e-070
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 216 4e-070
ref|NM_106666.2| Arabidopsis thaliana polygalacturonase AT1... 143 6e-070
gb|AY046002.1| Arabidopsis thaliana putative polygalacturon... 143 6e-070
gb|AY142668.1| Arabidopsis thaliana putative polygalacturon... 143 6e-070
gb|AC006248.4| Arabidopsis thaliana chromosome 2 clone F9O1... 218 1e-069
ref|NM_115611.2| Arabidopsis thaliana ADPG1; polygalacturon... 142 3e-069
dbj|AK117942.1| Arabidopsis thaliana At3g57510 mRNA for put... 142 3e-069
emb|AX412563.1| Sequence 327 from Patent WO0222675 142 3e-069
gb|BT005376.1| Arabidopsis thaliana At3g57510 mRNA, complet... 142 3e-069
emb|AX651724.1| Sequence 557 from Patent WO03000898 142 3e-069
gb|AC007651.2| Arabidopsis thaliana chromosome I BAC F20D23... 183 1e-067
emb|AX652128.1| Sequence 1979 from Patent WO03000898 212 2e-067
gb|AC013430.5|AC013430 Genomic sequence for Arabidopsis tha... 212 2e-067
dbj|AB019229.1| Arabidopsis thaliana genomic DNA, chromosom... 161 1e-066
ref|NM_180028.1| Arabidopsis thaliana polygalacturonase AT2... 136 8e-066
ref|NM_105231.1| Arabidopsis thaliana polygalacturonase AT1... 158 8e-066
emb|AX651722.1| Sequence 554 from Patent WO03000898 134 2e-065
ref|NM_105718.1| Arabidopsis thaliana polygalacturonase AT1... 136 2e-065
ref|NM_102195.1| Arabidopsis thaliana polygalacturonase AT1... 137 5e-065
ref|NM_111676.3| Arabidopsis thaliana polygalacturonase AT3... 143 9e-065
emb|AX651258.1| Sequence 42 from Patent WO03000898 151 1e-064
ref|NM_129949.1| Arabidopsis thaliana polygalacturonase AT2... 151 1e-064
gb|AY078936.1| Arabidopsis thaliana At2g41850/T11A7.5 mRNA,... 137 2e-064
emb|BX822956.1|CNS0A7SM Arabidopsis thaliana Full-length cD... 99 6e-064
emb|BX813348.1|CNS0AE3X Arabidopsis thaliana Full-length cD... 140 7e-064
gb|AU238792.1|AU238792 AU238792 RAFL19 Arabidopsis thaliana... 243 1e-062
gb|BT020180.1| Arabidopsis thaliana At3g59850 mRNA, complet... 149 7e-062
gb|BT015766.1| Arabidopsis thaliana At3g59850 mRNA, complet... 149 9e-062
emb|BX823105.1|CNS0A4UN Arabidopsis thaliana Full-length cD... 149 1e-061
emb|BX824927.1|CNS0A4TY Arabidopsis thaliana Full-length cD... 149 1e-061
ref|NM_115848.3| Arabidopsis thaliana polygalacturonase AT3... 149 1e-061
gb|BT005245.1| Arabidopsis thaliana At3g07830 mRNA, complet... 240 1e-061
emb|BX813651.1|CNS0AEBF Arabidopsis thaliana Full-length cD... 135 4e-060
emb|BX822380.1|CNS0A76T Arabidopsis thaliana Full-length cD... 149 1e-059
ref|NM_103706.2| Arabidopsis thaliana polygalacturonase AT1... 148 8e-059
gb|AF410319.1|AF410319 Arabidopsis thaliana At1g48100/F21D1... 148 8e-059
gb|AY050798.1| Arabidopsis thaliana putative polygalacturon... 148 8e-059
gb|AY096360.1| Arabidopsis thaliana putative polygalacturon... 148 8e-059
gb|DQ056577.1| Arabidopsis thaliana putative polygalacturon... 150 2e-057
ref|NM_129948.1| Arabidopsis thaliana polygalacturonase AT2... 150 2e-057
gb|CK118633.1|CK118633 216g11.p1 AtM1 Arabidopsis thaliana ... 210 2e-057
emb|BX814380.1|CNS0AC2P Arabidopsis thaliana Full-length cD... 149 4e-056
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 220 1e-055
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 220 1e-055
gb|AC007153.2| Arabidopsis thaliana chromosome I BAC F3F20 ... 116 1e-055
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 219 2e-055
ref|NM_121469.3| Arabidopsis thaliana polygalacturonase AT5... 144 1e-054
emb|BX831614.1|CNS09YP6 Arabidopsis thaliana Full-length cD... 144 1e-054
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 216 1e-054
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 216 2e-054
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 215 3e-054
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 215 3e-054
emb|BX813953.1|CNS0AEHM Arabidopsis thaliana Full-length cD... 142 3e-054
emb|BX824469.1|CNS0A6Z5 Arabidopsis thaliana Full-length cD... 137 4e-054
ref|NM_112442.1| Arabidopsis thaliana polygalacturonase AT3... 146 6e-054
gb|AY089177.1| Arabidopsis thaliana clone 6 mRNA, complete ... 146 6e-054
emb|BX815901.1|CNS0AEH8 Arabidopsis thaliana Full-length cD... 93 6e-054
gb|BT005780.1| Arabidopsis thaliana clone RAFL14-98-K19 (R2... 144 2e-053
gb|AC004005.3| Arabidopsis thaliana chromosome 2 clone F6E1... 118 6e-053
gb|AC001229.1|F5I14 Sequence of BAC F5I14 from Arabidopsis ... 157 3e-051
ref|NM_122635.2| Arabidopsis thaliana polygalacturonase AT5... 138 4e-050
emb|BX825672.1|CNS0A7UV Arabidopsis thaliana Full-length cD... 127 1e-049
gb|BX836604.1|BX836604 BX836604 Arabidopsis thaliana Flower... 104 4e-049
ref|NM_123354.1| Arabidopsis thaliana polygalacturonase AT5... 158 4e-049
ref|NM_104548.2| Arabidopsis thaliana polygalacturonase AT1... 138 9e-049
ref|NM_116419.2| Arabidopsis thaliana polygalacturonase AT4... 96 1e-048
emb|AL772721.1| Arabidopsis thaliana transposon insertion S... 194 7e-048
ref|NM_100127.2| Arabidopsis thaliana polygalacturonase AT1... 100 8e-048
gb|BT023462.1| Arabidopsis thaliana At1g02460 gene, complet... 100 8e-048
gb|AC002333.3| Arabidopsis thaliana chromosome 2 clone F18O... 119 1e-047
ref|NM_121726.1| Arabidopsis thaliana polygalacturonase AT5... 149 3e-047
gb|BT000611.1| Arabidopsis thaliana putative polygalacturon... 146 8e-047
gb|AY060568.1| Arabidopsis thaliana At1g60590/F8A5_12 mRNA,... 146 1e-046
ref|NM_104742.3| Arabidopsis thaliana polygalacturonase AT1... 146 1e-046
dbj|AK117620.1| Arabidopsis thaliana At3g26610 mRNA for put... 136 2e-046
ref|NM_113570.2| Arabidopsis thaliana polygalacturonase AT3... 136 2e-046
gb|AF037367.1| Arabidopsis thaliana endo-polygalacturonase ... 67 4e-046
ref|NM_123852.1| Arabidopsis thaliana polygalacturonase AT5... 142 6e-046
emb|AJ002532.1|ATAJ2532 Arabidopsis thaliana ADPG1 gene 67 2e-045
ref|NM_148391.1| Arabidopsis thaliana polygalacturonase AT4... 157 2e-045
emb|BX821033.1|CNS0AACW Arabidopsis thaliana Full-length cD... 100 5e-045
emb|AL138647.1|ATF24G16 Arabidopsis thaliana DNA chromosome... 116 9e-045
emb|BX816284.1|CNS0AD4M Arabidopsis thaliana Full-length cD... 138 2e-044
emb|BX816708.1|CNS0AD6H Arabidopsis thaliana Full-length cD... 126 3e-044
emb|BX814728.1|CNS0AAT1 Arabidopsis thaliana Full-length cD... 146 3e-044
ref|NM_100940.3| Arabidopsis thaliana polygalacturonase AT1... 145 6e-042
gb|AY039852.1| Arabidopsis thaliana At1g10640/F20B24_8 mRNA... 145 6e-042
gb|AC009322.1|AC009322 Arabidopsis thaliana chromosome I BA... 60 4e-041
emb|BX813497.1|CNS0ADHO Arabidopsis thaliana Full-length cD... 100 9e-041
gb|AI994651.1|AI994651 701499138 A. thaliana, Ohio State cl... 117 9e-041
emb|X97828.1|ATORF06 A.thaliana mRNA (orf06) from chromosom... 136 3e-040
gb|AY143959.1| Arabidopsis thaliana At1g10640/F20B24_8 mRNA... 145 3e-039
emb|CQ805350.1| Sequence 1761 from Patent WO2004035798 145 3e-039
ref|NM_123851.1| Arabidopsis thaliana polygalacturonase AT5... 141 5e-039
ref|NM_119732.2| Arabidopsis thaliana polygalacturonase AT4... 144 6e-039
gb|AQ010492.1|AQ010492 F23M1TFB IGF Arabidopsis thaliana ge... 139 2e-038
emb|AL163792.1|ATT15N1 Arabidopsis thaliana DNA chromosome ... 87 4e-037
gb|AC023673.3|AC023673 Genomic sequence for Arabidopsis tha... 70 7e-037
emb|AL133248.1|ATT8H10 Arabidopsis thaliana DNA chromosome ... 67 9e-037
ref|NM_119390.2| Arabidopsis thaliana polygalacturonase AT4... 120 1e-036
ref|NM_106663.1| Arabidopsis thaliana polygalacturonase AT1... 118 7e-036
gb|AC010796.7|AC010796 Arabidopsis thaliana chromosome 1 BA... 62 2e-035
gb|AC005990.1|F5O8 Arabidopsis thaliana chromosome 1 BAC F5... 61 7e-035
gb|AC007945.3|AC007945 Genomic sequence for Arabidopsis tha... 61 7e-035
emb|AX461137.1| Sequence 66 from Patent WO0198480 62 7e-035
emb|AX461255.1| Sequence 184 from Patent WO0198480 62 7e-035
gb|AV782140.1|AV782140 AV782140 RAFL4 Arabidopsis thaliana ... 95 1e-032
gb|AC002339.3| Arabidopsis thaliana chromosome 2 clone T11A... 62 2e-032
gb|CD531316.1|CD531316 10F09 Arabidopsis Leaf Senescence Li... 88 1e-031
gb|AC002292.1|AC002292 Arabidopsis thaliana BAC F8A5, compl... 85 3e-031
dbj|AB017071.1| Arabidopsis thaliana genomic DNA, chromosom... 62 4e-031
gb|AC009398.6|AC009398 Genomic sequence for Arabidopsis tha... 84 1e-030
dbj|AB005238.1| Arabidopsis thaliana genomic DNA, chromosom... 104 9e-030
dbj|AB010077.1| Arabidopsis thaliana genomic DNA, chromosom... 62 1e-028
ref|NM_119389.2| Arabidopsis thaliana polygalacturonase AT4... 63 6e-028
gb|AI993509.1|AI993509 701496530 A. thaliana, Ohio State cl... 85 6e-028
gb|AI995224.1|AI995224 701502760 A. thaliana, Ohio State cl... 127 7e-028
emb|AL034567.1|ATF8B4 Arabidopsis thaliana DNA chromosome 4... 53 2e-027
gb|AC009323.4|AC009323 Arabidopsis thaliana chromosome I BA... 64 2e-027
gb|BP815552.1|BP815552 BP815552 RAFL19 Arabidopsis thaliana... 125 5e-027
gb|B09328.1|B09328 F2P23-T7 IGF Arabidopsis thaliana genomi... 81 5e-027
gb|B28793.1|B28793 T19O12TR TAMU Arabidopsis thaliana genom... 95 6e-027
gb|R29820.1|R29820 12425 Lambda-PRL2 Arabidopsis thaliana c... 123 1e-026
emb|AL089539.1|CNS00TD1 Arabidopsis thaliana genome survey ... 94 3e-026
gb|AW004489.1|AW004489 701931827 A. thaliana, mixed source ... 122 3e-026
emb|AL161581.2|ATCHRIV77 Arabidopsis thaliana DNA chromosom... 53 6e-026
gb|AQ250348.1|AQ250348 T12D16-Sp6.2 TAMU Arabidopsis thalia... 67 3e-025
gb|AC064879.3|AC064879 Arabidopsis thaliana chromosome I BA... 62 5e-025
gb|AV532721.1|AV532721 AV532721 Arabidopsis thaliana flower... 117 1e-024
gb|AQ964056.1|AQ964056 LERGU38TF LERG Arabidopsis thaliana ... 87 2e-024
gb|AQ964057.1|AQ964057 LERGU38TR LERG Arabidopsis thaliana ... 87 2e-024
gb|BH792479.1|BH792479 SALK_064312.54.50.x Arabidopsis thal... 116 2e-024
gb|BZ666496.1|BZ666496 SGT6366-3-3 Arabidopsis thaliana Ds ... 116 2e-024
emb|CR357101.1| Arabidopsis thaliana T-DNA flanking sequenc... 116 2e-024
emb|AL091488.1|CNS00UV6 Arabidopsis thaliana genome survey ... 70 2e-024
gb|AC002342.1|ATAC002342 Arabidopsis thaliana chromosome V ... 67 8e-024
gb|AC007138.1| Arabidopsis thaliana BAC T7B11 from chromoso... 54 1e-023
dbj|AB016874.1| Arabidopsis thaliana genomic DNA, chromosom... 62 1e-023
dbj|AB010693.1| Arabidopsis thaliana genomic DNA, chromosom... 67 1e-023
gb|B78058.1|B78058 T30C17TR TAMU Arabidopsis thaliana genom... 76 2e-023
gb|BH613065.1|BH613065 SALK_033719 Arabidopsis thaliana TDN... 112 3e-023
gb|BH613074.1|BH613074 SALK_033729 Arabidopsis thaliana TDN... 112 3e-023
gb|BP815506.1|BP815506 BP815506 RAFL19 Arabidopsis thaliana... 85 5e-023
emb|AL161493.2|ATCHRIV5 Arabidopsis thaliana DNA chromosome... 54 2e-022
emb|X98130.1|AT81KBGEN Arabidopsis thaliana 81kb genomic se... 53 4e-022
dbj|AB028611.1| Arabidopsis thaliana genomic DNA, chromosom... 53 4e-022
emb|AJ552539.1|ATH552539 Arabidopsis thaliana T-DNA flankin... 77 4e-022
gb|B09753.1|B09753 F24F5-Sp6 IGF Arabidopsis thaliana genom... 106 2e-021
gb|B29424.1|B29424 F18O19TRE IGF Arabidopsis thaliana genom... 106 2e-021
gb|AV535049.1|AV535049 AV535049 Arabidopsis thaliana flower... 105 4e-021
gb|AQ961164.1|AQ961164 LERFJ55TF LERA Arabidopsis thaliana ... 55 6e-021
gb|B26350.1|B26350 F24F5TR IGF Arabidopsis thaliana genomic... 104 8e-021
>ref|NM_111663.2| Arabidopsis thaliana polygalacturonase AT3G07840 mRNA, complete cds
Length = 1296
Score = 324 bits (701), Expect(2) = 2e-098
Identities = 128/289 (44%), Positives = 179/289 (61%)
Frame = +2 / +1
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLL 574
W+ LR++ + G G DG+G A W N+C K ++CK LP S+ DFV N E+ ++ +
Sbjct: 385 WVVFLRINGFKLNGGGIFDGEGNAAWRVNNCHKTFECKKLPISIRFDFVENAEIRDISSI 564
Query: 575 NSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGP 754
++K FH+N+ K+M +V V AP +SPNTDGIH+G S G+ I N+ I GDDCIS+G
Sbjct: 565 DAKNFHINVLGAKNMTFDNVKVIAPAESPNTDGIHLGRSEGVKILNSKIATGDDCISVGD 744
Query: 755 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASV 934
G +++ V CGPGHGIS+GSLGRY E+DVT I V +CTL+ T G+RIK + AA
Sbjct: 745 GMKNLHVENVMCGPGHGISVGSLGRYVHEQDVTGITVVNCTLQGTDNGLRIKTWPSAACA 924
Query: 935 LTVSKIHYENIKMEDSANPIFIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAV 1114
T S IH+ENI + + +NPI ID +YCP C S + + D++FKNI GTS +AV
Sbjct: 925 TTASGIHFENIILNNVSNPILIDQEYCPWNQCNKQKPSTIKLVDISFKNIRGTSGNKDAV 1104
Query: 1115 SLLCTAKVPCTGVTMDDVNVEYSGTNNKTMAICTNAKGSTKGCLKELAC 1261
LLC+ PC V + ++N+EY G + +C+N G AC
Sbjct: 1105 KLLCSKAHPCANVEIGNINLEYKGADGPPTFMCSNVSPKLVGTQNPKAC 1251
Score = 185 bits (398), Expect(2) = 1e-046
Identities = 105/269 (39%), Positives = 140/269 (52%)
Frame = -3 / -2
Query: 1239 PLVLPLAFVHIAMVLLLVPLYSTLTSSMVTPVHGTLAVQSRLTASGVEEVPVMFLKVTSL 1060
P L F H+ + PLYS L + T HG + + TAS +VP++FLK+ S
Sbjct: 1229 PTSLGETFEHMKVGGPSAPLYSRLMFPISTFAHGCALLHNSFTASLFPDVPLIFLKLMST 1050
Query: 1059 TVTLEAPLAVHNLLGQYFMSMKMGLAESSILIFS*WILETVSTEAASSYALMRTPNIVFL 880
++ ++ +H GQY SM++GL ++FS I E V +AA + L+ +P V
Sbjct: 1049 SLIVDGFCLLHWFQGQYSWSMRIGLLTLLRMMFSK*IPEAVVAQAADGHVLILSPLSVP* 870
Query: 879 RVQSLTLMSVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMV 700
RVQ T+M VTS S Y PRLP L+P PGP +T + +P P EMQSSP + L ++
Sbjct: 869 RVQFTTVMPVTSCSCTYLPRLPTLIPCPGPHITFSTWRFFIPSPTEMQSSPVAILELRIL 690
Query: 699 IPDESPMWMPSVLGLSPGAVTVTSLISMSLHRYMFMWKNLELSSVTPDTSPLFTKSITSE 520
P P W+PSVLGLS GA+T+T M L FMWK L S TKS
Sbjct: 689 TPSLLPKWIPSVLGLSAGAMTLTLSKVMFLAPRTFMWKFLASIEDMSLISAFSTKSNLIL 510
Query: 519 LGRILQSYFLVQEFLLHTAGPCPSRFPLP 433
+G L S L Q L A P PS+ P P
Sbjct: 509 MGSFLHSKVL*QLLTLQAALPSPSKIPPP 423
Score = 59.3 bits (123), Expect(2) = 2e-098
Identities = 27/80 (33%), Positives = 42/80 (52%)
Frame = +2 / +1
Query: 146 GGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGPCKGD 325
G S + G+ +D T+A+ +A+ SAC ++I KG+F +G++ TGPCK
Sbjct: 142 GFSANAEVFNVGGSPGSDITQALLKAFTSACQAPTASKVVITKGEFKLGEIEMTGPCKAP 321
Query: 326 VTIQVDGNLLATTDLSQYKD 385
V I + G L A Q K+
Sbjct: 322 VEINLQGTLKADGKAIQGKE 381
Score = 25.4 bits (49), Expect(2) = 1e-046
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -3 / -2
Query: 384 SLYWLRSVVASRLPSTWMVTSPLQGPVKLSCPTRKSP 274
S W+ A R+P + T L GPV P+ SP
Sbjct: 380 SFPWIAFPSALRVPWRLISTGALHGPVISISPSLNSP 270
>emb|AJ005584.1|ATH005584 Arabidopsis thaliana mRNA for polygalacturonase
Length = 1350
Score = 320 bits (693), Expect(2) = 7e-097
Identities = 125/289 (43%), Positives = 182/289 (62%)
Frame = +2 / +2
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLL 574
W+ +D + G G DG+G A W N+C K ++CK LP S+ DF+ N E+ ++ +
Sbjct: 317 WVVFGNIDGFKLNGGGAFDGEGNAAWRVNNCHKTFECKKLPISIRFDFILNSEIRDISSI 496
Query: 575 NSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGP 754
++K FH+N+ K+M + ++ + AP DSPNTDGIH+G S GI I N+ I GDDCIS+G
Sbjct: 497 DAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGIKILNSFISTGDDCISVGD 676
Query: 755 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASV 934
G +++ VTCGPGHGIS+GSLGRY E+DV+ I V +CTL++T G+RIK + AA
Sbjct: 677 GMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTLQETDNGLRIKTWPSAACS 856
Query: 935 LTVSKIHYENIKMEDSANPIFIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAV 1114
T S IH+E+I ++D +NPI ID +YCP C AS + + +++FKNI GTS +AV
Sbjct: 857 TTASDIHFEDIILKDVSNPILIDQEYCPWNQCNKQKASTIKLVNISFKNIRGTSGNKDAV 1036
Query: 1115 SLLCTAKVPCTGVTMDDVNVEYSGTNNKTMAICTNAKGSTKGCLKELAC 1261
LLC+ PC V + D++++Y+G + C+N G AC
Sbjct: 1037 KLLCSKGYPCQNVEIGDIDIKYNGADGPATFHCSNVSPKILGSQSPKAC 1183
Score = 166 bits (357), Expect(2) = 4e-042
Identities = 93/227 (40%), Positives = 121/227 (53%)
Frame = -3 / -1
Query: 1260 HASSLRQPLVLPLAFVHIAMVLLLVPLYSTLTSSMVTPVHGTLAVQSRLTASGVEEVPVM 1081
HA L P +L L F + PLY S + T HG +QS TAS +VP+M
Sbjct: 1182 HALGL*DPKILGLTFEQWKVAGPSAPLYLISMSPISTFWHGYPLLQSSFTASLFPDVPLM 1003
Query: 1080 FLKVTSLTVTLEAPLAVHNLLGQYFMSMKMGLAESSILIFS*WILETVSTEAASSYALMR 901
FLK+ + ++A +H GQY SM++GL S +I S I + V +AA + L+
Sbjct: 1002 FLKLMFTNLIVDAFCLLHWFQGQYSWSMRIGLLTSLRIISSK*ISDAVVEQAAEGHVLIL 823
Query: 900 TPNIVFLRVQSLTLMSVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTP 721
P V RVQ +TLM +TS S Y PRLP L+P PGP VT +P P E+QSSP
Sbjct: 822 NPLSVS*RVQLMTLMPLTSCSCPYLPRLPTLIPCPGPHVTFST*RFFIPSPTEIQSSPVE 643
Query: 720 MTVLVMVIPDESPMWMPSVLGLSPGAVTVTSLISMSLHRYMFMWKNL 580
M L ++IP P W+PSVLGLS GA + + M L MWK L
Sbjct: 642 MKELRILIPSLLPKWIPSVLGLSSGATILMLFMVMFLAPNTLMWKFL 502
Score = 57.9 bits (120), Expect(2) = 7e-097
Identities = 21/64 (32%), Positives = 39/64 (60%)
Frame = +2 / +2
Query: 194 TDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATTDLS 373
+D T+A+ +A+ SAC + ++IPKG+F +G++ GPCK + + + G + A +
Sbjct: 122 SDITQALLKAFTSACQSSSPSKVVIPKGEFKLGEIEMRGPCKAPIEVTLQGTVKADGNAI 301
Query: 374 QYKD 385
Q K+
Sbjct: 302 QGKE 313
Score = 29.0 bits (57), Expect(2) = 4e-042
Identities = 24/94 (25%), Positives = 35/94 (37%)
Frame = -3 / -1
Query: 477 LLHTAGPCPSRFPLPVMTRLSTRRISIQLPWSLYWLRSVVASRLPSTWMVTSPLQGPVKL 298
LL PS P L + +S W+ A +P L GP+
Sbjct: 405 LLTLQAALPSPSKAPPPFNLKPSMLPKTTHFSFPWIALPSALTVP*RVTSMGALHGPLIS 226
Query: 297 SCPTRKSPLGMRIVCFPVPPHADAHASCTAFVLS 196
P+ SP G+ + HAD +A +A V+S
Sbjct: 225 ISPSLNSPFGITTLLGDEDWHADVNAFRSA*VIS 124
>gb|AY065239.1| Arabidopsis thaliana putative polygalacturonase(PGA3 (At3g07820)
mRNA, complete cds
Length = 1401
Score = 319 bits (692), Expect(2) = 1e-096
Identities = 124/289 (42%), Positives = 182/289 (62%)
Frame = +2 / +2
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLL 574
W+ +D + G G DG+G A W N+C K ++CK LP S+ DF+ N E+ ++ +
Sbjct: 359 WVVFGNIDGFKLNGGGAFDGEGNAAWRVNNCHKTFECKKLPISIRFDFILNSEIRDISSI 538
Query: 575 NSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGP 754
++K FH+N+ K+M + ++ + AP DSPNTDGIH+G S G+ I N+ I GDDCIS+G
Sbjct: 539 DAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGVKILNSFISTGDDCISVGD 718
Query: 755 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASV 934
G +++ VTCGPGHGIS+GSLGRY E+DV+ I V +CTL++T G+RIK + AA
Sbjct: 719 GMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTLQETDNGLRIKTWPSAACS 898
Query: 935 LTVSKIHYENIKMEDSANPIFIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAV 1114
T S IH+E+I ++D +NPI ID +YCP C AS + + +++FKNI GTS +AV
Sbjct: 899 TTASDIHFEDIILKDVSNPILIDQEYCPWNQCNKQKASTIKLVNISFKNIRGTSGNKDAV 1078
Query: 1115 SLLCTAKVPCTGVTMDDVNVEYSGTNNKTMAICTNAKGSTKGCLKELAC 1261
LLC+ PC V + D++++Y+G + C+N G AC
Sbjct: 1079 KLLCSKGYPCQNVEIGDIDIKYNGADGPATFHCSNVSPKILGSQSPKAC 1225
Score = 164 bits (352), Expect(2) = 2e-041
Identities = 92/227 (40%), Positives = 120/227 (52%)
Frame = -3 / -1
Query: 1260 HASSLRQPLVLPLAFVHIAMVLLLVPLYSTLTSSMVTPVHGTLAVQSRLTASGVEEVPVM 1081
HA L P +L L F + PLY S + T HG +QS TAS +VP+M
Sbjct: 1224 HALGL*DPKILGLTFEQWKVAGPSAPLYLISMSPISTFWHGYPLLQSSFTASLFPDVPLM 1045
Query: 1080 FLKVTSLTVTLEAPLAVHNLLGQYFMSMKMGLAESSILIFS*WILETVSTEAASSYALMR 901
FLK+ + ++A +H GQY SM++GL S +I S I + V +AA + L+
Sbjct: 1044 FLKLMFTNLIVDAFCLLHWFQGQYSWSMRIGLLTSLRIISSK*ISDAVVEQAAEGHVLIL 865
Query: 900 TPNIVFLRVQSLTLMSVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTP 721
P V RVQ +TLM +TS S Y PRLP L+P PGP VT +P P E+QSSP
Sbjct: 864 NPLSVS*RVQLMTLMPLTSCSCPYLPRLPTLIPCPGPHVTFST*RFFIPSPTEIQSSPVE 685
Query: 720 MTVLVMVIPDESPMWMPSVLGLSPGAVTVTSLISMSLHRYMFMWKNL 580
M L ++ P P W+PSVLGLS GA + + M L MWK L
Sbjct: 684 MKELRILTPSLLPKWIPSVLGLSSGATILMLFMVMFLAPNTLMWKFL 544
Score = 57.9 bits (120), Expect(2) = 1e-096
Identities = 21/64 (32%), Positives = 39/64 (60%)
Frame = +2 / +2
Query: 194 TDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATTDLS 373
+D T+A+ +A+ SAC + ++IPKG+F +G++ GPCK + + + G + A +
Sbjct: 164 SDITQALLKAFTSACQSSSPSKVVIPKGEFKLGEIEMRGPCKAPIEVTLQGTVKADGNAI 343
Query: 374 QYKD 385
Q K+
Sbjct: 344 QGKE 355
Score = 29.0 bits (57), Expect(2) = 2e-041
Identities = 24/94 (25%), Positives = 35/94 (37%)
Frame = -3 / -1
Query: 477 LLHTAGPCPSRFPLPVMTRLSTRRISIQLPWSLYWLRSVVASRLPSTWMVTSPLQGPVKL 298
LL PS P L + +S W+ A +P L GP+
Sbjct: 447 LLTLQAALPSPSKAPPPFNLKPSMLPKTTHFSFPWIALPSALTVP*RVTSMGALHGPLIS 268
Query: 297 SCPTRKSPLGMRIVCFPVPPHADAHASCTAFVLS 196
P+ SP G+ + HAD +A +A V+S
Sbjct: 267 ISPSLNSPFGITTLLGDEDWHADVNAFRSA*VIS 166
>ref|NM_111661.2| Arabidopsis thaliana polygalacturonase AT3G07820 mRNA, complete cds
Length = 1400
Score = 319 bits (692), Expect(2) = 1e-096
Identities = 124/289 (42%), Positives = 182/289 (62%)
Frame = +2 / +2
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLL 574
W+ +D + G G DG+G A W N+C K ++CK LP S+ DF+ N E+ ++ +
Sbjct: 359 WVVFGNIDGFKLNGGGAFDGEGNAAWRVNNCHKTFECKKLPISIRFDFILNSEIRDISSI 538
Query: 575 NSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGP 754
++K FH+N+ K+M + ++ + AP DSPNTDGIH+G S G+ I N+ I GDDCIS+G
Sbjct: 539 DAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGVKILNSFISTGDDCISVGD 718
Query: 755 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASV 934
G +++ VTCGPGHGIS+GSLGRY E+DV+ I V +CTL++T G+RIK + AA
Sbjct: 719 GMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTLQETDNGLRIKTWPSAACS 898
Query: 935 LTVSKIHYENIKMEDSANPIFIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAV 1114
T S IH+E+I ++D +NPI ID +YCP C AS + + +++FKNI GTS +AV
Sbjct: 899 TTASDIHFEDIILKDVSNPILIDQEYCPWNQCNKQKASTIKLVNISFKNIRGTSGNKDAV 1078
Query: 1115 SLLCTAKVPCTGVTMDDVNVEYSGTNNKTMAICTNAKGSTKGCLKELAC 1261
LLC+ PC V + D++++Y+G + C+N G AC
Sbjct: 1079 KLLCSKGYPCQNVEIGDIDIKYNGADGPATFHCSNVSPKILGSQSPKAC 1225
Score = 164 bits (352), Expect(2) = 2e-041
Identities = 92/227 (40%), Positives = 120/227 (52%)
Frame = -3 / -3
Query: 1260 HASSLRQPLVLPLAFVHIAMVLLLVPLYSTLTSSMVTPVHGTLAVQSRLTASGVEEVPVM 1081
HA L P +L L F + PLY S + T HG +QS TAS +VP+M
Sbjct: 1224 HALGL*DPKILGLTFEQWKVAGPSAPLYLISMSPISTFWHGYPLLQSSFTASLFPDVPLM 1045
Query: 1080 FLKVTSLTVTLEAPLAVHNLLGQYFMSMKMGLAESSILIFS*WILETVSTEAASSYALMR 901
FLK+ + ++A +H GQY SM++GL S +I S I + V +AA + L+
Sbjct: 1044 FLKLMFTNLIVDAFCLLHWFQGQYSWSMRIGLLTSLRIISSK*ISDAVVEQAAEGHVLIL 865
Query: 900 TPNIVFLRVQSLTLMSVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTP 721
P V RVQ +TLM +TS S Y PRLP L+P PGP VT +P P E+QSSP
Sbjct: 864 NPLSVS*RVQLMTLMPLTSCSCPYLPRLPTLIPCPGPHVTFST*RFFIPSPTEIQSSPVE 685
Query: 720 MTVLVMVIPDESPMWMPSVLGLSPGAVTVTSLISMSLHRYMFMWKNL 580
M L ++ P P W+PSVLGLS GA + + M L MWK L
Sbjct: 684 MKELRILTPSLLPKWIPSVLGLSSGATILMLFMVMFLAPNTLMWKFL 544
Score = 57.9 bits (120), Expect(2) = 1e-096
Identities = 21/64 (32%), Positives = 39/64 (60%)
Frame = +2 / +2
Query: 194 TDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATTDLS 373
+D T+A+ +A+ SAC + ++IPKG+F +G++ GPCK + + + G + A +
Sbjct: 164 SDITQALLKAFTSACQSSSPSKVVIPKGEFKLGEIEMRGPCKAPIEVTLQGTVKADGNAI 343
Query: 374 QYKD 385
Q K+
Sbjct: 344 QGKE 355
Score = 29.0 bits (57), Expect(2) = 2e-041
Identities = 24/94 (25%), Positives = 35/94 (37%)
Frame = -3 / -3
Query: 477 LLHTAGPCPSRFPLPVMTRLSTRRISIQLPWSLYWLRSVVASRLPSTWMVTSPLQGPVKL 298
LL PS P L + +S W+ A +P L GP+
Sbjct: 447 LLTLQAALPSPSKAPPPFNLKPSMLPKTTHFSFPWIALPSALTVP*RVTSMGALHGPLIS 268
Query: 297 SCPTRKSPLGMRIVCFPVPPHADAHASCTAFVLS 196
P+ SP G+ + HAD +A +A V+S
Sbjct: 267 ISPSLNSPFGITTLLGDEDWHADVNAFRSA*VIS 166
>gb|AY087578.1| Arabidopsis thaliana clone 36765 mRNA, complete sequence
Length = 1385
Score = 319 bits (692), Expect(2) = 1e-096
Identities = 124/289 (42%), Positives = 182/289 (62%)
Frame = +2 / +2
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLL 574
W+ +D + G G DG+G A W N+C K ++CK LP S+ DF+ N E+ ++ +
Sbjct: 359 WVVFGNIDGFKLNGGGAFDGEGNAAWRVNNCHKTFECKKLPISIRFDFILNSEIRDISSI 538
Query: 575 NSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGP 754
++K FH+N+ K+M + ++ + AP DSPNTDGIH+G S G+ I N+ I GDDCIS+G
Sbjct: 539 DAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGVKILNSFISTGDDCISVGD 718
Query: 755 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASV 934
G +++ VTCGPGHGIS+GSLGRY E+DV+ I V +CTL++T G+RIK + AA
Sbjct: 719 GMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTLQETDNGLRIKTWPSAACS 898
Query: 935 LTVSKIHYENIKMEDSANPIFIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAV 1114
T S IH+E+I ++D +NPI ID +YCP C AS + + +++FKNI GTS +AV
Sbjct: 899 TTASDIHFEDIILKDVSNPILIDQEYCPWNQCNKQKASTIKLVNISFKNIRGTSGNKDAV 1078
Query: 1115 SLLCTAKVPCTGVTMDDVNVEYSGTNNKTMAICTNAKGSTKGCLKELAC 1261
LLC+ PC V + D++++Y+G + C+N G AC
Sbjct: 1079 KLLCSKGYPCQNVEIGDIDIKYNGADGPATFHCSNVSPKILGSQSPKAC 1225
Score = 164 bits (352), Expect(2) = 2e-041
Identities = 92/227 (40%), Positives = 120/227 (52%)
Frame = -3 / -3
Query: 1260 HASSLRQPLVLPLAFVHIAMVLLLVPLYSTLTSSMVTPVHGTLAVQSRLTASGVEEVPVM 1081
HA L P +L L F + PLY S + T HG +QS TAS +VP+M
Sbjct: 1224 HALGL*DPKILGLTFEQWKVAGPSAPLYLISMSPISTFWHGYPLLQSSFTASLFPDVPLM 1045
Query: 1080 FLKVTSLTVTLEAPLAVHNLLGQYFMSMKMGLAESSILIFS*WILETVSTEAASSYALMR 901
FLK+ + ++A +H GQY SM++GL S +I S I + V +AA + L+
Sbjct: 1044 FLKLMFTNLIVDAFCLLHWFQGQYSWSMRIGLLTSLRIISSK*ISDAVVEQAAEGHVLIL 865
Query: 900 TPNIVFLRVQSLTLMSVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTP 721
P V RVQ +TLM +TS S Y PRLP L+P PGP VT +P P E+QSSP
Sbjct: 864 NPLSVS*RVQLMTLMPLTSCSCPYLPRLPTLIPCPGPHVTFST*RFFIPSPTEIQSSPVE 685
Query: 720 MTVLVMVIPDESPMWMPSVLGLSPGAVTVTSLISMSLHRYMFMWKNL 580
M L ++ P P W+PSVLGLS GA + + M L MWK L
Sbjct: 684 MKELRILTPSLLPKWIPSVLGLSSGATILMLFMVMFLAPNTLMWKFL 544
Score = 57.9 bits (120), Expect(2) = 1e-096
Identities = 21/64 (32%), Positives = 39/64 (60%)
Frame = +2 / +2
Query: 194 TDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATTDLS 373
+D T+A+ +A+ SAC + ++IPKG+F +G++ GPCK + + + G + A +
Sbjct: 164 SDITQALLKAFTSACQSSSPSKVVIPKGEFKLGEIEMRGPCKAPIEVTLQGTVKADGNAI 343
Query: 374 QYKD 385
Q K+
Sbjct: 344 QGKE 355
Score = 29.0 bits (57), Expect(2) = 2e-041
Identities = 24/94 (25%), Positives = 35/94 (37%)
Frame = -3 / -3
Query: 477 LLHTAGPCPSRFPLPVMTRLSTRRISIQLPWSLYWLRSVVASRLPSTWMVTSPLQGPVKL 298
LL PS P L + +S W+ A +P L GP+
Sbjct: 447 LLTLQAALPSPSKAPPPFNLKPSMLPKTTHFSFPWIALPSALTVP*RVTSMGALHGPLIS 268
Query: 297 SCPTRKSPLGMRIVCFPVPPHADAHASCTAFVLS 196
P+ SP G+ + HAD +A +A V+S
Sbjct: 267 ISPSLNSPFGITTLLGDEDWHADVNAFRSA*VIS 166
>gb|AY096534.1| Arabidopsis thaliana putative polygalacturonase (PGA3) (At3g07820)
mRNA, complete cds
Length = 1207
Score = 319 bits (692), Expect(2) = 1e-096
Identities = 124/289 (42%), Positives = 182/289 (62%)
Frame = +2 / +1
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLL 574
W+ +D + G G DG+G A W N+C K ++CK LP S+ DF+ N E+ ++ +
Sbjct: 292 WVVFGNIDGFKLNGGGAFDGEGNAAWRVNNCHKTFECKKLPISIRFDFILNSEIRDISSI 471
Query: 575 NSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGP 754
++K FH+N+ K+M + ++ + AP DSPNTDGIH+G S G+ I N+ I GDDCIS+G
Sbjct: 472 DAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGVKILNSFISTGDDCISVGD 651
Query: 755 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASV 934
G +++ VTCGPGHGIS+GSLGRY E+DV+ I V +CTL++T G+RIK + AA
Sbjct: 652 GMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTLQETDNGLRIKTWPSAACS 831
Query: 935 LTVSKIHYENIKMEDSANPIFIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAV 1114
T S IH+E+I ++D +NPI ID +YCP C AS + + +++FKNI GTS +AV
Sbjct: 832 TTASDIHFEDIILKDVSNPILIDQEYCPWNQCNKQKASTIKLVNISFKNIRGTSGNKDAV 1011
Query: 1115 SLLCTAKVPCTGVTMDDVNVEYSGTNNKTMAICTNAKGSTKGCLKELAC 1261
LLC+ PC V + D++++Y+G + C+N G AC
Sbjct: 1012 KLLCSKGYPCQNVEIGDIDIKYNGADGPATFHCSNVSPKILGSQSPKAC 1158
Score = 164 bits (352), Expect(2) = 2e-041
Identities = 92/227 (40%), Positives = 120/227 (52%)
Frame = -3 / -3
Query: 1260 HASSLRQPLVLPLAFVHIAMVLLLVPLYSTLTSSMVTPVHGTLAVQSRLTASGVEEVPVM 1081
HA L P +L L F + PLY S + T HG +QS TAS +VP+M
Sbjct: 1157 HALGL*DPKILGLTFEQWKVAGPSAPLYLISMSPISTFWHGYPLLQSSFTASLFPDVPLM 978
Query: 1080 FLKVTSLTVTLEAPLAVHNLLGQYFMSMKMGLAESSILIFS*WILETVSTEAASSYALMR 901
FLK+ + ++A +H GQY SM++GL S +I S I + V +AA + L+
Sbjct: 977 FLKLMFTNLIVDAFCLLHWFQGQYSWSMRIGLLTSLRIISSK*ISDAVVEQAAEGHVLIL 798
Query: 900 TPNIVFLRVQSLTLMSVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTP 721
P V RVQ +TLM +TS S Y PRLP L+P PGP VT +P P E+QSSP
Sbjct: 797 NPLSVS*RVQLMTLMPLTSCSCPYLPRLPTLIPCPGPHVTFST*RFFIPSPTEIQSSPVE 618
Query: 720 MTVLVMVIPDESPMWMPSVLGLSPGAVTVTSLISMSLHRYMFMWKNL 580
M L ++ P P W+PSVLGLS GA + + M L MWK L
Sbjct: 617 MKELRILTPSLLPKWIPSVLGLSSGATILMLFMVMFLAPNTLMWKFL 477
Score = 57.9 bits (120), Expect(2) = 1e-096
Identities = 21/64 (32%), Positives = 39/64 (60%)
Frame = +2 / +1
Query: 194 TDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATTDLS 373
+D T+A+ +A+ SAC + ++IPKG+F +G++ GPCK + + + G + A +
Sbjct: 97 SDITQALLKAFTSACQSSSPSKVVIPKGEFKLGEIEMRGPCKAPIEVTLQGTVKADGNAI 276
Query: 374 QYKD 385
Q K+
Sbjct: 277 QGKE 288
Score = 29.0 bits (57), Expect(2) = 2e-041
Identities = 24/94 (25%), Positives = 35/94 (37%)
Frame = -3 / -3
Query: 477 LLHTAGPCPSRFPLPVMTRLSTRRISIQLPWSLYWLRSVVASRLPSTWMVTSPLQGPVKL 298
LL PS P L + +S W+ A +P L GP+
Sbjct: 380 LLTLQAALPSPSKAPPPFNLKPSMLPKTTHFSFPWIALPSALTVP*RVTSMGALHGPLIS 201
Query: 297 SCPTRKSPLGMRIVCFPVPPHADAHASCTAFVLS 196
P+ SP G+ + HAD +A +A V+S
Sbjct: 200 ISPSLNSPFGITTLLGDEDWHADVNAFRSA*VIS 99
>emb|BX823174.1|CNS0A74O Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB95ZD09 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1329
Score = 315 bits (682), Expect(2) = 2e-095
Identities = 122/289 (42%), Positives = 181/289 (62%)
Frame = +2 / +2
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLL 574
W+ ++ + G G DG+G A W N+C K ++CK LP S+ DF+ N E+ ++ +
Sbjct: 344 WVVFGNINGFKLNGGGAFDGEGNAAWRVNNCHKTFECKKLPISIRFDFILNSEIRDISSI 523
Query: 575 NSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGP 754
++K FH+N+ K+M + ++ + AP DSPNTDGIH+G S G+ I N+ I GDDCIS+G
Sbjct: 524 DAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGVKILNSFISTGDDCISVGD 703
Query: 755 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASV 934
G +++ VTCGPGHGIS+GSLGRY E+DV+ I V +CTL++T G+RIK + AA
Sbjct: 704 GMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTLQETDNGLRIKTWPSAACS 883
Query: 935 LTVSKIHYENIKMEDSANPIFIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAV 1114
T S IH+E+I ++D +NPI ID +YCP C AS + + +++FKNI GT +AV
Sbjct: 884 TTASDIHFEDIILKDVSNPILIDQEYCPWNQCNKQKASTIKLVNISFKNIRGTPGNKDAV 1063
Query: 1115 SLLCTAKVPCTGVTMDDVNVEYSGTNNKTMAICTNAKGSTKGCLKELAC 1261
LLC+ PC V + D++++Y+G + C+N G AC
Sbjct: 1064 KLLCSKGYPCQNVEIGDIDIKYNGADGPATFHCSNVSPKILGSQSPKAC 1210
Score = 162 bits (348), Expect(2) = 9e-041
Identities = 92/227 (40%), Positives = 119/227 (52%)
Frame = -3 / -1
Query: 1260 HASSLRQPLVLPLAFVHIAMVLLLVPLYSTLTSSMVTPVHGTLAVQSRLTASGVEEVPVM 1081
HA L P +L L F + PLY S + T HG +QS TAS VP+M
Sbjct: 1209 HALGL*DPKILGLTFEQWKVAGPSAPLYLISMSPISTFWHGYPLLQSSFTASLFPGVPLM 1030
Query: 1080 FLKVTSLTVTLEAPLAVHNLLGQYFMSMKMGLAESSILIFS*WILETVSTEAASSYALMR 901
FLK+ + ++A +H GQY SM++GL S +I S I + V +AA + L+
Sbjct: 1029 FLKLMFTNLIVDAFCLLHWFQGQYSWSMRIGLLTSLRIISSK*ISDAVVEQAAEGHVLIL 850
Query: 900 TPNIVFLRVQSLTLMSVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTP 721
P V RVQ +TLM +TS S Y PRLP L+P PGP VT +P P E+QSSP
Sbjct: 849 NPLSVS*RVQLMTLMPLTSCSCPYLPRLPTLIPCPGPHVTFST*RFFIPSPTEIQSSPVE 670
Query: 720 MTVLVMVIPDESPMWMPSVLGLSPGAVTVTSLISMSLHRYMFMWKNL 580
M L ++ P P W+PSVLGLS GA + + M L MWK L
Sbjct: 669 MKELRILTPSLLPKWIPSVLGLSSGATILMLFMVMFLAPNTLMWKFL 529
Score = 57.9 bits (120), Expect(2) = 2e-095
Identities = 21/64 (32%), Positives = 39/64 (60%)
Frame = +2 / +2
Query: 194 TDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATTDLS 373
+D T+A+ +A+ SAC + ++IPKG+F +G++ GPCK + + + G + A +
Sbjct: 149 SDITQALLKAFTSACQSSSPSKVVIPKGEFKLGEIEMRGPCKAPIEVTLQGTVKADGNAI 328
Query: 374 QYKD 385
Q K+
Sbjct: 329 QGKE 340
Score = 28.6 bits (56), Expect(2) = 9e-041
Identities = 24/94 (25%), Positives = 35/94 (37%)
Frame = -3 / -1
Query: 477 LLHTAGPCPSRFPLPVMTRLSTRRISIQLPWSLYWLRSVVASRLPSTWMVTSPLQGPVKL 298
LL PS P L + +S W+ A +P L GP+
Sbjct: 432 LLTLQAALPSPSKAPPPFNLKPLMLPKTTHFSFPWIALPSALTVP*RVTSMGALHGPLIS 253
Query: 297 SCPTRKSPLGMRIVCFPVPPHADAHASCTAFVLS 196
P+ SP G+ + HAD +A +A V+S
Sbjct: 252 ISPSLNSPFGITTLLGDEDWHADVNAFRSA*VIS 151
>gb|AY089015.1| Arabidopsis thaliana clone 16377 mRNA, complete sequence
Length = 1462
Score = 319 bits (690), Expect(2) = 2e-094
Identities = 125/289 (43%), Positives = 180/289 (62%)
Frame = +2 / +2
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLL 574
W+ ++ + G G DG+G A W N+C K ++CK LP S+ DFV + ++ G+T L
Sbjct: 404 WVAFRNINGFKLNGGGVFDGEGNAAWRVNNCHKTFNCKKLPISIRFDFVTDAKIRGITSL 583
Query: 575 NSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGP 754
++K FH+N+ K+M +DV + AP +SPNTDGIH+G S GI I N+ I GDDC+S+G
Sbjct: 584 DAKHFHINVIGAKNMTFEDVKIIAPAESPNTDGIHVGRSDGIKIINSFISTGDDCVSVGD 763
Query: 755 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASV 934
G + + VTCGPGHGISIGSLGRY E++V+ I + +CTL++T G+RIK + AA
Sbjct: 764 GMKNLLVERVTCGPGHGISIGSLGRYSHEENVSGIKIINCTLQETDNGLRIKTWPSAACT 943
Query: 935 LTVSKIHYENIKMEDSANPIFIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAV 1114
T S IH+ENI +++ +NPI ID +YCP C S + + +++FK I GTS +AV
Sbjct: 944 TTASDIHFENILLKNVSNPILIDQEYCPWNQCNKQKPSTIKLANISFKKIRGTSGNKDAV 1123
Query: 1115 SLLCTAKVPCTGVTMDDVNVEYSGTNNKTMAICTNAKGSTKGCLKELAC 1261
LLC+ PC V + DVN++Y+G + C+N G AC
Sbjct: 1124 KLLCSKGYPCQNVEVGDVNIQYTGADGPATFQCSNVSPKLVGTQIPKAC 1270
Score = 180 bits (387), Expect(2) = 2e-046
Identities = 99/251 (39%), Positives = 128/251 (50%)
Frame = -3 / -2
Query: 1185 PLYSTLTSSMVTPVHGTLAVQSRLTASGVEEVPVMFLKVTSLTVTLEAPLAVHNLLGQYF 1006
P+Y TS T HG + TAS +VP++FLK+ + ++ +H GQY
Sbjct: 1194 PVYWMFTSPTSTF*HGYPLLHKSFTASLFPDVPLIFLKLILANLIVDGFCLLHWFHGQYS 1015
Query: 1005 MSMKMGLAESSILIFS*WILETVSTEAASSYALMRTPNIVFLRVQSLTLMSVTSFSSLYR 826
SM+MGL +FS WI E V +AA + L+ P V RVQ + LM +T S LY
Sbjct: 1014 WSMRMGLLTFLRRMFSKWISEAVVVQAAEGHVLILRPLSVSWRVQLMILMPLTFSSWLYL 835
Query: 825 PRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVIPDESPMWMPSVLGLSPG 646
PRLP+L+P PGP VT +P P E QSSP + L+++IP P W+PSVLGLS G
Sbjct: 834 PRLPILIPCPGPHVTLSTRRFFIPSPTETQSSPVEINELMILIPSLLPTWIPSVLGLSAG 655
Query: 645 AVTVTSLISMSLHRYMFMWKNLELSSVTPDTSPLFTKSITSELGRILQSYFLVQEFLLHT 466
A+ +TS M MWK V P TKS +G LQ L Q L
Sbjct: 654 AMILTSSNVMFFAPMTLMWKCFASKEVMPLIFASVTKSNLMLMGSFLQLKVLWQLLTLQA 475
Query: 465 AGPCPSRFPLP 433
A P PS+ P P
Sbjct: 474 AFPSPSKTPPP 442
Score = 51.5 bits (106), Expect(2) = 2e-094
Identities = 20/55 (36%), Positives = 34/55 (61%)
Frame = +2 / +2
Query: 194 TDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLA 358
+D T A+ +A+ AC K T++IPKG++ +G++ GPCK + I + G + A
Sbjct: 212 SDITNALLKAFNEACQFPTKSTVMIPKGEYKLGEIVMMGPCKAPIRIALLGTVKA 376
Score = 29.5 bits (58), Expect(2) = 2e-046
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = -3 / -2
Query: 357 ASRLPSTWMVTSPLQGPVKLSCPTRKSPLGMRIVCFPVPPHADAHASCTAFVLS 196
A +P ++ L GP+ P+ SP G+ V F HA +A A V+S
Sbjct: 375 AFTVPRRAILIGALHGPIITISPSLYSPFGIITVLFVGNWHASLNAFNNALVIS 214
>ref|NM_111662.2| Arabidopsis thaliana polygalacturonase AT3G07830 mRNA, complete cds
Length = 1460
Score = 316 bits (685), Expect(2) = 2e-094
Identities = 122/289 (42%), Positives = 181/289 (62%)
Frame = +2 / +2
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLL 574
W+ R+D + G G DG+G A W N+C K ++CK LP S+ DFV N E+ ++ +
Sbjct: 350 WVVFQRMDGFRLNGGGTFDGEGNAAWRVNNCHKTFECKKLPISIRFDFVTNAEIRDISSI 529
Query: 575 NSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGP 754
++K FH+N+ K+M +V + AP +SPNTDGIH+G S G++I N+ I GDDC+S+G
Sbjct: 530 DAKNFHINVIGAKNMTFDNVKIMAPAESPNTDGIHLGRSVGVSIINSRISTGDDCVSVGD 709
Query: 755 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASV 934
G + + V CGPGHGIS+GSLGRY E+DV+ I V +CTL++T G+RIK + AA
Sbjct: 710 GMVNLLVKNVVCGPGHGISVGSLGRYGHEQDVSGIRVINCTLQETDNGLRIKTWPSAACS 889
Query: 935 LTVSKIHYENIKMEDSANPIFIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAV 1114
T S IH+ENI + + +NPI ID +YCP C +S + + +++F+ I GTS +AV
Sbjct: 890 TTASNIHFENIILRNVSNPILIDQEYCPWNQCNKQKSSSIKLANISFRRIRGTSGNKDAV 1069
Query: 1115 SLLCTAKVPCTGVTMDDVNVEYSGTNNKTMAICTNAKGSTKGCLKELAC 1261
LLC+ PC V + D+N++Y+G + +C+N + G AC
Sbjct: 1070 KLLCSKGYPCENVQVGDINIQYTGADGPATFMCSNVRPKLVGTQFPKAC 1216
Score = 149 bits (319), Expect(2) = 2e-036
Identities = 81/203 (39%), Positives = 109/203 (53%)
Frame = -3 / -3
Query: 1239 PLVLPLAFVHIAMVLLLVPLYSTLTSSMVTPVHGTLAVQSRLTASGVEEVPVMFLKVTSL 1060
P L L F H+ + P+Y L S T HG + + TAS +VP++ LK+
Sbjct: 1194 PTSLGLTFEHMKVAGPSAPVY*ILMSPT*TFSHGYPLLHNSFTASLFPDVPLILLKLMFA 1015
Query: 1059 TVTLEAPLAVHNLLGQYFMSMKMGLAESSILIFS*WILETVSTEAASSYALMRTPNIVFL 880
++ + +H GQY SM++GL +IFS ILE V +AA L+ P V
Sbjct: 1014 SLMDDDFCLLHWFQGQYSWSMRIGLLTFLRMIFSK*ILEAVVEQAAEGQVLILRPLSVSW 835
Query: 879 RVQSLTLMSVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMV 700
RVQ +TLM +TS S Y PRLP L+P PGP T + +P P E QSSP + L+M
Sbjct: 834 RVQLMTLMPLTSCSCPYLPRLPTLIPCPGPHTTFLTRRFTIPSPTETQSSPVEILELIME 655
Query: 699 IPDESPMWMPSVLGLSPGAVTVT 631
P P W+PSVLGLS GA+ +T
Sbjct: 654 TPTLLPKWIPSVLGLSAGAMILT 586
Score = 53.8 bits (111), Expect(2) = 2e-094
Identities = 21/55 (38%), Positives = 35/55 (63%)
Frame = +2 / +2
Query: 194 TDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLA 358
+D T+A+ A+ +AC + ++IPKG F +G++ +GPCK V I + G +LA
Sbjct: 155 SDITQALLRAFTTACQSPTPRKVVIPKGQFKLGEIMMSGPCKSPVEITLLGTVLA 319
Score = 27.2 bits (53), Expect(2) = 2e-036
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = -3 / -3
Query: 552 SPLFTKSITSELGRILQSYFLVQEFLLHTAGPCPSRFPLP 433
S TKS +G L S L Q L A P PS+ P P
Sbjct: 507 SAFVTKSNLILMGSFLHSKVL*QLLTLQAALPSPSKVPPP 388
>emb|X73222.1|ATEGP A.thaliana mRNA for exopolygalacturonase
Length = 1617
Score = 190 bits (409), Expect(4) = 4e-094
Identities = 73/160 (45%), Positives = 101/160 (63%)
Frame = +2 / +2
Query: 437 KGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKD 616
K DGQG W N C K C LP ++ + N +++ +T NSK FHMN+ CK+
Sbjct: 548 KAIFDGQGSLAWKANDCAKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKN 727
Query: 617 MLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGPGTSKVNITGVTCGP 796
+ + D+++ AP +S NTDGIH+G S+G+ + I GDDC+SIG GT + + V CGP
Sbjct: 728 ITLTDISIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGP 907
Query: 797 GHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAY 916
GHGISIGSLGRY +E+ V + V+ C +K T GVRIK +
Sbjct: 908 GHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGVRIKTW 1027
Score = 108 bits (230), Expect(4) = 4e-094
Identities = 44/106 (41%), Positives = 64/106 (60%)
Frame = +2 / +2
Query: 944 SKIHYENIKMEDSANPIFIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAVSLL 1123
S I +E+I M++ + P+ ID +YCP C A SKV + DVT KNI GTS+T AV L+
Sbjct: 1052 SNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSKVKLSDVTIKNIKGTSATKVAVKLM 1231
Query: 1124 CTAKVPCTGVTMDDVNVEYSGTNNKTMAICTNAKGSTKGCLKELAC 1261
C+ VPCT + + D+N+ ++G ++ C+N K G L AC
Sbjct: 1232 CSKGVPCTNIALSDINLVHNGKEGPAVSACSNIKPILSGKLVPAAC 1369
Score = 107 bits (229), Expect(4) = 2e-038
Identities = 53/112 (47%), Positives = 64/112 (57%)
Frame = -3 / -1
Query: 915 YALMRTPNIVFLRVQSLTLMSVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQ 736
+ LMRTP VFL LT+ T S Y PRLPM +P PGP T VP PME Q
Sbjct: 1026 HVLMRTPLSVFLMRHFLTVTPFTGCSLGYLPRLPMEIPCPGPHSTFSTMRFSVPSPMETQ 847
Query: 735 SSPTPMTVLVMVIPDESPMWMPSVLGLSPGAVTVTSLISMSLHRYMFMWKNL 580
SSP + + + P + PMW+PSVL LS GA + S+ M L MFMWK+L
Sbjct: 846 SSPVLIFAPIKLTPLDLPMWIPSVLRLSGGASILISVRVMFLQLRMFMWKSL 691
Score = 67.0 bits (140), Expect(4) = 4e-094
Identities = 24/60 (40%), Positives = 36/60 (60%)
Frame = +2 / +2
Query: 257 TILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATTDLSQYKDHGNWIEILRVDNLVITG 436
TI +PKG++LV L F GPCKG VT++++GN A + K H WI+ + + + G
Sbjct: 365 TITVPKGEYLVESLEFKGPCKGPVTLELNGNFKAPATVKTTKPHAGWIDFENLADFTLNG 544
Score = 57.0 bits (118), Expect(4) = 2e-038
Identities = 37/107 (34%), Positives = 52/107 (48%)
Frame = -3 / -1
Query: 1257 ASSLRQPLVLPLAFVHIAMVLLLVPLYSTLTSSMVTPVHGTLAVQSRLTASGVEEVPVMF 1078
A+ PL + L H +PL++ L S V GT + TA+ V +VP+MF
Sbjct: 1365 AAGTNFPLRIGLMLEHAETAGPSLPLWTKLMSERAILVQGTPLLHISFTATFVADVPLMF 1186
Query: 1077 LKVTSLTVTLEAPLAVHNLLGQYFMSMKMGLAESSILIFS*WILETV 937
L VTS T + A+ GQY SM+ G SI+I S +LE +
Sbjct: 1185 LIVTSDNFTFDGTPALQWP*GQYSWSMRTGRLTLSIVISSKRMLEAI 1045
Score = 41.4 bits (84), Expect(4) = 4e-094
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +2 / +2
Query: 146 GGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTI 262
G S D+ GA G+GKTD + A AW AC T+
Sbjct: 260 GASLDVKASGAKGDGKTDDSAAFAAAWKEACAAGSTITV 376
Score = 32.2 bits (64), Expect(4) = 2e-038
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -3 / -1
Query: 234 ADAHASCTAFVLSVLPLPEAPNLVMSKDPP 145
A HA+ A + SVLP P AP+ + S D P
Sbjct: 348 ASFHAAANAALSSVLPSPLAPDALTSSDAP 259
Score = 32.2 bits (64), Expect(4) = 2e-038
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -3 / -1
Query: 357 ASRLPSTWMVTSPLQGPVKLSCPTRKSPLGMRIV 256
A +LP VT PL GP+ T+ SP G IV
Sbjct: 465 ALKLPFNSKVTGPLHGPLNSRLSTKYSPFGTVIV 364
>dbj|AK118684.1| Arabidopsis thaliana At5g48140 mRNA for putative polygalacturonase,
complete cds, clone: RAFL19-95-F20
Length = 1466
Score = 317 bits (686), Expect(2) = 6e-094
Identities = 124/289 (42%), Positives = 180/289 (62%)
Frame = +2 / +1
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLL 574
W+ ++ + G G DG+G A W N+C K ++CK LP S+ DFV + ++ G+T L
Sbjct: 406 WVAFRNINGFKLNGGGVFDGEGNAAWRVNNCHKTFNCKKLPISIRFDFVTDAKIRGITSL 585
Query: 575 NSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGP 754
++K FH+N+ K++ +DV + AP +SPNTDGIH+G S GI I N+ I GDDC+S+G
Sbjct: 586 DAKHFHINVIGAKNVTFEDVKIIAPAESPNTDGIHVGRSDGIKIINSFISTGDDCVSVGD 765
Query: 755 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASV 934
G + + VTCGPGHGISIGSLGRY E++V+ I + +CTL++T G+RIK + AA
Sbjct: 766 GMKNLLVERVTCGPGHGISIGSLGRYSHEENVSGIKIINCTLQETDNGLRIKTWPSAACT 945
Query: 935 LTVSKIHYENIKMEDSANPIFIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAV 1114
T S IH+ENI +++ +NPI ID +YCP C S + + +++FK I GTS +AV
Sbjct: 946 TTASDIHFENILLKNVSNPILIDQEYCPWNQCNKQKPSTIKLANISFKKIRGTSGNKDAV 1125
Query: 1115 SLLCTAKVPCTGVTMDDVNVEYSGTNNKTMAICTNAKGSTKGCLKELAC 1261
LLC+ PC V + DVN++Y+G + C+N G AC
Sbjct: 1126 KLLCSKGYPCQNVEVGDVNIQYTGADGPATFQCSNVSPKLVGTQIPKAC 1272
Score = 154 bits (331), Expect(3) = 4e-043
Identities = 78/186 (41%), Positives = 105/186 (56%)
Frame = -3 / -1
Query: 1185 PLYSTLTSSMVTPVHGTLAVQSRLTASGVEEVPVMFLKVTSLTVTLEAPLAVHNLLGQYF 1006
P+Y TS T HG + TAS +VP++FLK+ + ++ +H GQY
Sbjct: 1196 PVYWMFTSPTSTF*HGYPLLHKSFTASLFPDVPLIFLKLMLANLIVDGFCLLHWFHGQYS 1017
Query: 1005 MSMKMGLAESSILIFS*WILETVSTEAASSYALMRTPNIVFLRVQSLTLMSVTSFSSLYR 826
SM+MGL +FS WI E V +AA + L+ P V RVQ + LM +T S LY
Sbjct: 1016 WSMRMGLLTFLRRMFSKWISEAVVVQAAEGHVLILRPLSVSWRVQLMILMPLTFSSWLYL 837
Query: 825 PRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVIPDESPMWMPSVLGLSPG 646
PRLP+L+P PGP VT +P P E QSSP + L+++IP P W+PSVLGLS G
Sbjct: 836 PRLPILIPCPGPHVTLSTRRFFIPSPTETQSSPVEINELMILIPSLLPTWIPSVLGLSAG 657
Query: 645 AVTVTS 628
A+ +TS
Sbjct: 656 AMILTS 639
Score = 51.5 bits (106), Expect(2) = 6e-094
Identities = 20/55 (36%), Positives = 34/55 (61%)
Frame = +2 / +1
Query: 194 TDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLA 358
+D T A+ +A+ AC K T++IPKG++ +G++ GPCK + I + G + A
Sbjct: 214 SDITNALLKAFNEACQFPTKSTVMIPKGEYKLGEIVMMGPCKAPIRIALLGTVKA 378
Score = 33.1 bits (66), Expect(3) = 4e-043
Identities = 20/54 (37%), Positives = 22/54 (40%)
Frame = -3 / -1
Query: 594 MWKNLELSSVTPDTSPLFTKSITSELGRILQSYFLVQEFLLHTAGPCPSRFPLP 433
MWK V P TKS +G LQ L Q L A P PS+ P P
Sbjct: 605 MWKCFASKEVMPLIFASVTKSNLMLMGSFLQLKVLWQLLTLQAAFPSPSKTPPP 444
Score = 29.5 bits (58), Expect(3) = 4e-043
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = -3 / -1
Query: 357 ASRLPSTWMVTSPLQGPVKLSCPTRKSPLGMRIVCFPVPPHADAHASCTAFVLS 196
A +P ++ L GP+ P+ SP G+ V F HA +A A V+S
Sbjct: 377 AFTVPRRAILIGALHGPIITISPSLYSPFGIITVLFVGNWHASLNAFNNALVIS 216
>ref|NM_124188.2| Arabidopsis thaliana polygalacturonase AT5G48140 mRNA, complete cds
Length = 1439
Score = 317 bits (686), Expect(2) = 6e-094
Identities = 124/289 (42%), Positives = 180/289 (62%)
Frame = +2 / +1
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLL 574
W+ ++ + G G DG+G A W N+C K ++CK LP S+ DFV + ++ G+T L
Sbjct: 406 WVAFRNINGFKLNGGGVFDGEGNAAWRVNNCHKTFNCKKLPISIRFDFVTDAKIRGITSL 585
Query: 575 NSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGP 754
++K FH+N+ K++ +DV + AP +SPNTDGIH+G S GI I N+ I GDDC+S+G
Sbjct: 586 DAKHFHINVIGAKNVTFEDVKIIAPAESPNTDGIHVGRSDGIKIINSFISTGDDCVSVGD 765
Query: 755 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASV 934
G + + VTCGPGHGISIGSLGRY E++V+ I + +CTL++T G+RIK + AA
Sbjct: 766 GMKNLLVERVTCGPGHGISIGSLGRYSHEENVSGIKIINCTLQETDNGLRIKTWPSAACT 945
Query: 935 LTVSKIHYENIKMEDSANPIFIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAV 1114
T S IH+ENI +++ +NPI ID +YCP C S + + +++FK I GTS +AV
Sbjct: 946 TTASDIHFENILLKNVSNPILIDQEYCPWNQCNKQKPSTIKLANISFKKIRGTSGNKDAV 1125
Query: 1115 SLLCTAKVPCTGVTMDDVNVEYSGTNNKTMAICTNAKGSTKGCLKELAC 1261
LLC+ PC V + DVN++Y+G + C+N G AC
Sbjct: 1126 KLLCSKGYPCQNVEVGDVNIQYTGADGPATFQCSNVSPKLVGTQIPKAC 1272
Score = 154 bits (331), Expect(3) = 4e-043
Identities = 78/186 (41%), Positives = 105/186 (56%)
Frame = -3 / -1
Query: 1185 PLYSTLTSSMVTPVHGTLAVQSRLTASGVEEVPVMFLKVTSLTVTLEAPLAVHNLLGQYF 1006
P+Y TS T HG + TAS +VP++FLK+ + ++ +H GQY
Sbjct: 1196 PVYWMFTSPTSTF*HGYPLLHKSFTASLFPDVPLIFLKLMLANLIVDGFCLLHWFHGQYS 1017
Query: 1005 MSMKMGLAESSILIFS*WILETVSTEAASSYALMRTPNIVFLRVQSLTLMSVTSFSSLYR 826
SM+MGL +FS WI E V +AA + L+ P V RVQ + LM +T S LY
Sbjct: 1016 WSMRMGLLTFLRRMFSKWISEAVVVQAAEGHVLILRPLSVSWRVQLMILMPLTFSSWLYL 837
Query: 825 PRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVIPDESPMWMPSVLGLSPG 646
PRLP+L+P PGP VT +P P E QSSP + L+++IP P W+PSVLGLS G
Sbjct: 836 PRLPILIPCPGPHVTLSTRRFFIPSPTETQSSPVEINELMILIPSLLPTWIPSVLGLSAG 657
Query: 645 AVTVTS 628
A+ +TS
Sbjct: 656 AMILTS 639
Score = 51.5 bits (106), Expect(2) = 6e-094
Identities = 20/55 (36%), Positives = 34/55 (61%)
Frame = +2 / +1
Query: 194 TDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLA 358
+D T A+ +A+ AC K T++IPKG++ +G++ GPCK + I + G + A
Sbjct: 214 SDITNALLKAFNEACQFPTKSTVMIPKGEYKLGEIVMMGPCKAPIRIALLGTVKA 378
Score = 33.1 bits (66), Expect(3) = 4e-043
Identities = 20/54 (37%), Positives = 22/54 (40%)
Frame = -3 / -1
Query: 594 MWKNLELSSVTPDTSPLFTKSITSELGRILQSYFLVQEFLLHTAGPCPSRFPLP 433
MWK V P TKS +G LQ L Q L A P PS+ P P
Sbjct: 605 MWKCFASKEVMPLIFASVTKSNLMLMGSFLQLKVLWQLLTLQAAFPSPSKTPPP 444
Score = 29.5 bits (58), Expect(3) = 4e-043
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = -3 / -1
Query: 357 ASRLPSTWMVTSPLQGPVKLSCPTRKSPLGMRIVCFPVPPHADAHASCTAFVLS 196
A +P ++ L GP+ P+ SP G+ V F HA +A A V+S
Sbjct: 377 AFTVPRRAILIGALHGPIITISPSLYSPFGIITVLFVGNWHASLNAFNNALVIS 216
>gb|BT009687.1| Arabidopsis thaliana At5g48140 mRNA, complete cds
Length = 1188
Score = 317 bits (686), Expect(2) = 6e-094
Identities = 124/289 (42%), Positives = 180/289 (62%)
Frame = +2 / +1
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLL 574
W+ ++ + G G DG+G A W N+C K ++CK LP S+ DFV + ++ G+T L
Sbjct: 292 WVAFRNINGFKLNGGGVFDGEGNAAWRVNNCHKTFNCKKLPISIRFDFVTDAKIRGITSL 471
Query: 575 NSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGP 754
++K FH+N+ K++ +DV + AP +SPNTDGIH+G S GI I N+ I GDDC+S+G
Sbjct: 472 DAKHFHINVIGAKNVTFEDVKIIAPAESPNTDGIHVGRSDGIKIINSFISTGDDCVSVGD 651
Query: 755 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASV 934
G + + VTCGPGHGISIGSLGRY E++V+ I + +CTL++T G+RIK + AA
Sbjct: 652 GMKNLLVERVTCGPGHGISIGSLGRYSHEENVSGIKIINCTLQETDNGLRIKTWPSAACT 831
Query: 935 LTVSKIHYENIKMEDSANPIFIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAV 1114
T S IH+ENI +++ +NPI ID +YCP C S + + +++FK I GTS +AV
Sbjct: 832 TTASDIHFENILLKNVSNPILIDQEYCPWNQCNKQKPSTIKLANISFKKIRGTSGNKDAV 1011
Query: 1115 SLLCTAKVPCTGVTMDDVNVEYSGTNNKTMAICTNAKGSTKGCLKELAC 1261
LLC+ PC V + DVN++Y+G + C+N G AC
Sbjct: 1012 KLLCSKGYPCQNVEVGDVNIQYTGADGPATFQCSNVSPKLVGTQIPKAC 1158
Score = 154 bits (331), Expect(3) = 4e-043
Identities = 78/186 (41%), Positives = 105/186 (56%)
Frame = -3 / -2
Query: 1185 PLYSTLTSSMVTPVHGTLAVQSRLTASGVEEVPVMFLKVTSLTVTLEAPLAVHNLLGQYF 1006
P+Y TS T HG + TAS +VP++FLK+ + ++ +H GQY
Sbjct: 1082 PVYWMFTSPTSTF*HGYPLLHKSFTASLFPDVPLIFLKLMLANLIVDGFCLLHWFHGQYS 903
Query: 1005 MSMKMGLAESSILIFS*WILETVSTEAASSYALMRTPNIVFLRVQSLTLMSVTSFSSLYR 826
SM+MGL +FS WI E V +AA + L+ P V RVQ + LM +T S LY
Sbjct: 902 WSMRMGLLTFLRRMFSKWISEAVVVQAAEGHVLILRPLSVSWRVQLMILMPLTFSSWLYL 723
Query: 825 PRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVIPDESPMWMPSVLGLSPG 646
PRLP+L+P PGP VT +P P E QSSP + L+++IP P W+PSVLGLS G
Sbjct: 722 PRLPILIPCPGPHVTLSTRRFFIPSPTETQSSPVEINELMILIPSLLPTWIPSVLGLSAG 543
Query: 645 AVTVTS 628
A+ +TS
Sbjct: 542 AMILTS 525
Score = 51.5 bits (106), Expect(2) = 6e-094
Identities = 20/55 (36%), Positives = 34/55 (61%)
Frame = +2 / +1
Query: 194 TDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLA 358
+D T A+ +A+ AC K T++IPKG++ +G++ GPCK + I + G + A
Sbjct: 100 SDITNALLKAFNEACQFPTKSTVMIPKGEYKLGEIVMMGPCKAPIRIALLGTVKA 264
Score = 33.1 bits (66), Expect(3) = 4e-043
Identities = 20/54 (37%), Positives = 22/54 (40%)
Frame = -3 / -2
Query: 594 MWKNLELSSVTPDTSPLFTKSITSELGRILQSYFLVQEFLLHTAGPCPSRFPLP 433
MWK V P TKS +G LQ L Q L A P PS+ P P
Sbjct: 491 MWKCFASKEVMPLIFASVTKSNLMLMGSFLQLKVLWQLLTLQAAFPSPSKTPPP 330
Score = 29.5 bits (58), Expect(3) = 4e-043
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = -3 / -2
Query: 357 ASRLPSTWMVTSPLQGPVKLSCPTRKSPLGMRIVCFPVPPHADAHASCTAFVLS 196
A +P ++ L GP+ P+ SP G+ V F HA +A A V+S
Sbjct: 263 AFTVPRRAILIGALHGPIITISPSLYSPFGIITVLFVGNWHASLNAFNNALVIS 102
>ref|NM_112258.2| Arabidopsis thaliana polygalacturonase AT3G14040 mRNA, complete cds
Length = 1668
Score = 188 bits (406), Expect(4) = 1e-093
Identities = 73/160 (45%), Positives = 100/160 (62%)
Frame = +2 / +1
Query: 437 KGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKD 616
K DGQG W N C K C LP ++ + N +++ +T NSK FHMN+ CK+
Sbjct: 580 KAIFDGQGSLAWKANDCAKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKN 759
Query: 617 MLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGPGTSKVNITGVTCGP 796
+ + D+ + AP +S NTDGIH+G S+G+ + I GDDC+SIG GT + + V CGP
Sbjct: 760 ITLTDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGP 939
Query: 797 GHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAY 916
GHGISIGSLGRY +E+ V + V+ C +K T GVRIK +
Sbjct: 940 GHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGVRIKTW 1059
Score = 108 bits (230), Expect(4) = 1e-093
Identities = 44/106 (41%), Positives = 64/106 (60%)
Frame = +2 / +1
Query: 944 SKIHYENIKMEDSANPIFIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAVSLL 1123
S I +E+I M++ + P+ ID +YCP C A SKV + DVT KNI GTS+T AV L+
Sbjct: 1084 SNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSKVKLSDVTIKNIKGTSATKVAVKLM 1263
Query: 1124 CTAKVPCTGVTMDDVNVEYSGTNNKTMAICTNAKGSTKGCLKELAC 1261
C+ VPCT + + D+N+ ++G ++ C+N K G L AC
Sbjct: 1264 CSKGVPCTNIALSDINLVHNGKEGPAVSACSNIKPILSGKLVPAAC 1401
Score = 106 bits (226), Expect(4) = 7e-038
Identities = 53/112 (47%), Positives = 63/112 (56%)
Frame = -3 / -2
Query: 915 YALMRTPNIVFLRVQSLTLMSVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQ 736
+ LMRTP VFL LT+ T S Y PRLPM +P PGP T VP PME Q
Sbjct: 1058 HVLMRTPLSVFLMRHFLTVTPFTGCSLGYLPRLPMEIPCPGPHSTFSTMRFSVPSPMETQ 879
Query: 735 SSPTPMTVLVMVIPDESPMWMPSVLGLSPGAVTVTSLISMSLHRYMFMWKNL 580
SSP + + + P + PMW+PSVL LS GA S+ M L MFMWK+L
Sbjct: 878 SSPVLIFAPIKLTPLDLPMWIPSVLRLSGGASIPISVRVMFLQLRMFMWKSL 723
Score = 67.0 bits (140), Expect(4) = 1e-093
Identities = 24/60 (40%), Positives = 36/60 (60%)
Frame = +2 / +1
Query: 257 TILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATTDLSQYKDHGNWIEILRVDNLVITG 436
TI +PKG++LV L F GPCKG VT++++GN A + K H WI+ + + + G
Sbjct: 397 TITVPKGEYLVESLEFKGPCKGPVTLELNGNFKAPATVKTTKPHAGWIDFENLADFTLNG 576
Score = 57.0 bits (118), Expect(4) = 7e-038
Identities = 37/107 (34%), Positives = 52/107 (48%)
Frame = -3 / -2
Query: 1257 ASSLRQPLVLPLAFVHIAMVLLLVPLYSTLTSSMVTPVHGTLAVQSRLTASGVEEVPVMF 1078
A+ PL + L H +PL++ L S V GT + TA+ V +VP+MF
Sbjct: 1397 AAGTNFPLRIGLMLEHAETAGPSLPLWTKLMSERAILVQGTPLLHISFTATFVADVPLMF 1218
Query: 1077 LKVTSLTVTLEAPLAVHNLLGQYFMSMKMGLAESSILIFS*WILETV 937
L VTS T + A+ GQY SM+ G SI+I S +LE +
Sbjct: 1217 LIVTSDNFTFDGTPALQWP*GQYSWSMRTGRLTLSIVISSKRMLEAI 1077
Score = 41.4 bits (84), Expect(4) = 1e-093
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +2 / +1
Query: 146 GGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTI 262
G S D+ GA G+GKTD + A AW AC T+
Sbjct: 292 GASLDVKASGAKGDGKTDDSAAFAAAWKEACAAGSTITV 408
Score = 32.2 bits (64), Expect(4) = 7e-038
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -3 / -2
Query: 234 ADAHASCTAFVLSVLPLPEAPNLVMSKDPP 145
A HA+ A + SVLP P AP+ + S D P
Sbjct: 380 ASFHAAANAALSSVLPSPLAPDALTSSDAP 291
Score = 32.2 bits (64), Expect(4) = 7e-038
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -3 / -2
Query: 357 ASRLPSTWMVTSPLQGPVKLSCPTRKSPLGMRIV 256
A +LP VT PL GP+ T+ SP G IV
Sbjct: 497 ALKLPFNSKVTGPLHGPLNSRLSTKYSPFGTVIV 396
>emb|X72292.1|ATEXOPB A.thaliana (clone GBGa483) mRNA for exopolygalacturonase
Length = 1652
Score = 189 bits (407), Expect(4) = 1e-093
Identities = 73/160 (45%), Positives = 100/160 (62%)
Frame = +2 / +2
Query: 437 KGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKD 616
K DGQG W N C K C LP ++ + N +++ +T NSK FHMN+ CK+
Sbjct: 539 KAIFDGQGSLAWKANDCAKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKN 718
Query: 617 MLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGPGTSKVNITGVTCGP 796
+ + D+ + AP +S NTDGIH+G S+G+ + I GDDC+SIG GT + + V CGP
Sbjct: 719 ITLSDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGP 898
Query: 797 GHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAY 916
GHGISIGSLGRY +E+ V + V+ C +K T GVRIK +
Sbjct: 899 GHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGVRIKTW 1018
Score = 104 bits (222), Expect(4) = 2e-035
Identities = 53/112 (47%), Positives = 62/112 (55%)
Frame = -3 / -3
Query: 915 YALMRTPNIVFLRVQSLTLMSVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQ 736
+ LMRTP VFL LT+ T S Y PRLPM +P PGP T VP PME Q
Sbjct: 1017 HVLMRTPLSVFLMRHFLTVTPFTGCSLGYLPRLPMEIPCPGPHSTFSTMRFSVPSPMETQ 838
Query: 735 SSPTPMTVLVMVIPDESPMWMPSVLGLSPGAVTVTSLISMSLHRYMFMWKNL 580
SSP + + + P + PMW+PSVL LS GA S M L MFMWK+L
Sbjct: 837 SSPVLIFAPIKLTPLDLPMWIPSVLRLSGGASIPISERVMFLQLRMFMWKSL 682
Score = 103 bits (220), Expect(4) = 1e-093
Identities = 42/106 (39%), Positives = 63/106 (59%)
Frame = +2 / +2
Query: 944 SKIHYENIKMEDSANPIFIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAVSLL 1123
S I +E+I M++ + P+ ID +YCP C A S+V + DVT K I GTS+T AV L+
Sbjct: 1043 SNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSQVKLSDVTIKGIKGTSATKVAVKLM 1222
Query: 1124 CTAKVPCTGVTMDDVNVEYSGTNNKTMAICTNAKGSTKGCLKELAC 1261
C+ VPCT + + D+N+ ++G ++ C+N K G L AC
Sbjct: 1223 CSKGVPCTNIALSDINLVHNGKEGPAVSACSNIKPILSGKLVPAAC 1360
Score = 67.0 bits (140), Expect(4) = 1e-093
Identities = 23/60 (38%), Positives = 36/60 (60%)
Frame = +2 / +2
Query: 257 TILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATTDLSQYKDHGNWIEILRVDNLVITG 436
TI +PKG+++V L F GPCKG VT++++GN A + K H WI+ + + + G
Sbjct: 356 TITVPKGEYMVESLEFKGPCKGPVTLELNGNFKAPATVKTTKPHAGWIDFENIADFTLNG 535
Score = 51.0 bits (105), Expect(4) = 2e-035
Identities = 36/107 (33%), Positives = 51/107 (47%)
Frame = -3 / -3
Query: 1257 ASSLRQPLVLPLAFVHIAMVLLLVPLYSTLTSSMVTPVHGTLAVQSRLTASGVEEVPVMF 1078
A+ PL + L H +PL++ L S V GT + TA+ V +VP+M
Sbjct: 1356 AAGTNFPLRIGLMLEHAETAGPSLPLWTKLMSERAILVQGTPLLHISFTATFVADVPLMP 1177
Query: 1077 LKVTSLTVTLEAPLAVHNLLGQYFMSMKMGLAESSILIFS*WILETV 937
L VTS T + A+ GQY SM+ G SI+I S +LE +
Sbjct: 1176 LIVTSDNFTCDGTPALQWP*GQYSWSMRTGRLTLSIVISSKRMLEAM 1036
Score = 45.5 bits (93), Expect(4) = 1e-093
Identities = 19/55 (34%), Positives = 25/55 (45%)
Frame = +2 / +2
Query: 98 GEKEESKGIDAKASGPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTI 262
G S G + PG + D+ GA G+GKTD + A AW AC T+
Sbjct: 203 GGAAASVGAKVSGAKPGAAVDVKASGAKGDGKTDDSAAFAAAWKEACAAGSTITV 367
Score = 33.6 bits (67), Expect(4) = 2e-035
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = -3 / -3
Query: 234 ADAHASCTAFVLSVLPLPEAPNLVMSKDPPGPDAFASMPFDSSFSPCTMQKRTRRNKALI 55
A HA+ A + SVLP P AP+ + S PG P D++ P + + +
Sbjct: 339 ASFHAAANAALSSVLPSPLAPDALTSTAAPGLAPDTLAPTDAAAPPTAVAAFFAVSSTAV 160
Query: 54 ALF 46
A F
Sbjct: 159 AAF 151
Score = 29.9 bits (59), Expect(4) = 2e-035
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = -3 / -3
Query: 357 ASRLPSTWMVTSPLQGPVKLSCPTRKSPLGMRIV 256
A +LP VT PL GP+ T SP G IV
Sbjct: 456 ALKLPFNSKVTGPLHGPLNSRLSTIYSPFGTVIV 355
>gb|AY056173.1| Arabidopsis thaliana putative exopolygalacturonase (At3g07850) mRNA,
complete cds
Length = 1705
Score = 189 bits (407), Expect(4) = 7e-093
Identities = 73/160 (45%), Positives = 100/160 (62%)
Frame = +2 / +3
Query: 437 KGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKD 616
K DGQG W N C K C LP ++ + N +++ +T NSK FHMN+ CK+
Sbjct: 576 KAIFDGQGSLAWKANDCAKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKN 755
Query: 617 MLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGPGTSKVNITGVTCGP 796
+ + D+ + AP +S NTDGIH+G S+G+ + I GDDC+SIG GT + + V CGP
Sbjct: 756 ITLSDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGP 935
Query: 797 GHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAY 916
GHGISIGSLGRY +E+ V + V+ C +K T GVRIK +
Sbjct: 936 GHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGVRIKTW 1055
Score = 104 bits (222), Expect(4) = 6e-034
Identities = 53/112 (47%), Positives = 62/112 (55%)
Frame = -3 / -1
Query: 915 YALMRTPNIVFLRVQSLTLMSVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQ 736
+ LMRTP VFL LT+ T S Y PRLPM +P PGP T VP PME Q
Sbjct: 1054 HVLMRTPLSVFLMRHFLTVTPFTGCSLGYLPRLPMEIPCPGPHSTFSTMRFSVPSPMETQ 875
Query: 735 SSPTPMTVLVMVIPDESPMWMPSVLGLSPGAVTVTSLISMSLHRYMFMWKNL 580
SSP + + + P + PMW+PSVL LS GA S M L MFMWK+L
Sbjct: 874 SSPVLIFAPIKLTPLDLPMWIPSVLRLSGGASIPISERVMFLQLRMFMWKSL 719
Score = 103 bits (220), Expect(4) = 7e-093
Identities = 42/106 (39%), Positives = 63/106 (59%)
Frame = +2 / +3
Query: 944 SKIHYENIKMEDSANPIFIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAVSLL 1123
S I +E+I M++ + P+ ID +YCP C A S+V + DVT K I GTS+T AV L+
Sbjct: 1080 SNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSQVKLSDVTIKGIKGTSATKVAVKLM 1259
Query: 1124 CTAKVPCTGVTMDDVNVEYSGTNNKTMAICTNAKGSTKGCLKELAC 1261
C+ VPCT + + D+N+ ++G ++ C+N K G L AC
Sbjct: 1260 CSKGVPCTNIALSDINLVHNGKEGPAVSACSNIKPILSGKLVPAAC 1397
Score = 67.0 bits (140), Expect(4) = 7e-093
Identities = 23/60 (38%), Positives = 36/60 (60%)
Frame = +2 / +3
Query: 257 TILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATTDLSQYKDHGNWIEILRVDNLVITG 436
TI +PKG+++V L F GPCKG VT++++GN A + K H WI+ + + + G
Sbjct: 393 TITVPKGEYMVESLEFKGPCKGPVTLELNGNFKAPATVKTTKPHAGWIDFENIADFTLNG 572
Score = 51.0 bits (105), Expect(4) = 6e-034
Identities = 36/107 (33%), Positives = 51/107 (47%)
Frame = -3 / -1
Query: 1257 ASSLRQPLVLPLAFVHIAMVLLLVPLYSTLTSSMVTPVHGTLAVQSRLTASGVEEVPVMF 1078
A+ PL + L H +PL++ L S V GT + TA+ V +VP+M
Sbjct: 1393 AAGTNFPLRIGLMLEHAETAGPSLPLWTKLMSERAILVQGTPLLHISFTATFVADVPLMP 1214
Query: 1077 LKVTSLTVTLEAPLAVHNLLGQYFMSMKMGLAESSILIFS*WILETV 937
L VTS T + A+ GQY SM+ G SI+I S +LE +
Sbjct: 1213 LIVTSDNFTCDGTPALQWP*GQYSWSMRTGRLTLSIVISSKRMLEAM 1073
Score = 42.8 bits (87), Expect(4) = 7e-093
Identities = 18/55 (32%), Positives = 24/55 (43%)
Frame = +2 / +3
Query: 98 GEKEESKGIDAKASGPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTI 262
G S G + PG + D+ GA G+ KTD + A AW AC T+
Sbjct: 240 GGAAASVGAKVSGAKPGAAVDVKASGAKGDSKTDDSAAFAAAWKEACAAGSTITV 404
Score = 29.9 bits (59), Expect(4) = 6e-034
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = -3 / -1
Query: 357 ASRLPSTWMVTSPLQGPVKLSCPTRKSPLGMRIV 256
A +LP VT PL GP+ T SP G IV
Sbjct: 493 ALKLPFNSKVTGPLHGPLNSRLSTIYSPFGTVIV 392
Score = 29.0 bits (57), Expect(4) = 6e-034
Identities = 18/63 (28%), Positives = 27/63 (42%)
Frame = -3 / -1
Query: 234 ADAHASCTAFVLSVLPLPEAPNLVMSKDPPGPDAFASMPFDSSFSPCTMQKRTRRNKALI 55
A HA+ A + SVL P AP+ + S PG P D++ P + + +
Sbjct: 376 ASFHAAANAALSSVLLSPLAPDALTSTAAPGLAPDTLAPTDAAAPPTAVAAFFAVSSTAV 197
Query: 54 ALF 46
A F
Sbjct: 196 AAF 188
>ref|NM_111664.1| Arabidopsis thaliana polygalacturonase AT3G07850 mRNA, complete cds
Length = 1690
Score = 189 bits (407), Expect(4) = 7e-093
Identities = 73/160 (45%), Positives = 100/160 (62%)
Frame = +2 / +3
Query: 437 KGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKD 616
K DGQG W N C K C LP ++ + N +++ +T NSK FHMN+ CK+
Sbjct: 576 KAIFDGQGSLAWKANDCAKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKN 755
Query: 617 MLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGPGTSKVNITGVTCGP 796
+ + D+ + AP +S NTDGIH+G S+G+ + I GDDC+SIG GT + + V CGP
Sbjct: 756 ITLSDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGP 935
Query: 797 GHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAY 916
GHGISIGSLGRY +E+ V + V+ C +K T GVRIK +
Sbjct: 936 GHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGVRIKTW 1055
Score = 104 bits (222), Expect(4) = 5e-034
Identities = 53/112 (47%), Positives = 62/112 (55%)
Frame = -3 / -1
Query: 915 YALMRTPNIVFLRVQSLTLMSVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQ 736
+ LMRTP VFL LT+ T S Y PRLPM +P PGP T VP PME Q
Sbjct: 1054 HVLMRTPLSVFLMRHFLTVTPFTGCSLGYLPRLPMEIPCPGPHSTFSTMRFSVPSPMETQ 875
Query: 735 SSPTPMTVLVMVIPDESPMWMPSVLGLSPGAVTVTSLISMSLHRYMFMWKNL 580
SSP + + + P + PMW+PSVL LS GA S M L MFMWK+L
Sbjct: 874 SSPVLIFAPIKLTPLDLPMWIPSVLRLSGGASIPISERVMFLQLRMFMWKSL 719
Score = 103 bits (220), Expect(4) = 7e-093
Identities = 42/106 (39%), Positives = 63/106 (59%)
Frame = +2 / +3
Query: 944 SKIHYENIKMEDSANPIFIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAVSLL 1123
S I +E+I M++ + P+ ID +YCP C A S+V + DVT K I GTS+T AV L+
Sbjct: 1080 SNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSQVKLSDVTIKGIKGTSATKVAVKLM 1259
Query: 1124 CTAKVPCTGVTMDDVNVEYSGTNNKTMAICTNAKGSTKGCLKELAC 1261
C+ VPCT + + D+N+ ++G ++ C+N K G L AC
Sbjct: 1260 CSKGVPCTNIALSDINLVHNGKEGPAVSACSNIKPILSGKLVPAAC 1397
Score = 67.0 bits (140), Expect(4) = 7e-093
Identities = 23/60 (38%), Positives = 36/60 (60%)
Frame = +2 / +3
Query: 257 TILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATTDLSQYKDHGNWIEILRVDNLVITG 436
TI +PKG+++V L F GPCKG VT++++GN A + K H WI+ + + + G
Sbjct: 393 TITVPKGEYMVESLEFKGPCKGPVTLELNGNFKAPATVKTTKPHAGWIDFENIADFTLNG 572
Score = 51.0 bits (105), Expect(4) = 5e-034
Identities = 36/107 (33%), Positives = 51/107 (47%)
Frame = -3 / -1
Query: 1257 ASSLRQPLVLPLAFVHIAMVLLLVPLYSTLTSSMVTPVHGTLAVQSRLTASGVEEVPVMF 1078
A+ PL + L H +PL++ L S V GT + TA+ V +VP+M
Sbjct: 1393 AAGTNFPLRIGLMLEHAETAGPSLPLWTKLMSERAILVQGTPLLHISFTATFVADVPLMP 1214
Query: 1077 LKVTSLTVTLEAPLAVHNLLGQYFMSMKMGLAESSILIFS*WILETV 937
L VTS T + A+ GQY SM+ G SI+I S +LE +
Sbjct: 1213 LIVTSDNFTCDGTPALQWP*GQYSWSMRTGRLTLSIVISSKRMLEAM 1073
Score = 42.8 bits (87), Expect(4) = 7e-093
Identities = 18/55 (32%), Positives = 24/55 (43%)
Frame = +2 / +3
Query: 98 GEKEESKGIDAKASGPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTI 262
G S G + PG + D+ GA G+ KTD + A AW AC T+
Sbjct: 240 GGAAASVGAKVSGAKPGAAVDVKASGAKGDSKTDDSAAFAAAWKEACAAGSTITV 404
Score = 29.9 bits (59), Expect(4) = 5e-034
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = -3 / -1
Query: 357 ASRLPSTWMVTSPLQGPVKLSCPTRKSPLGMRIV 256
A +LP VT PL GP+ T SP G IV
Sbjct: 493 ALKLPFNSKVTGPLHGPLNSRLSTIYSPFGTVIV 392
Score = 29.0 bits (57), Expect(4) = 5e-034
Identities = 18/63 (28%), Positives = 27/63 (42%)
Frame = -3 / -1
Query: 234 ADAHASCTAFVLSVLPLPEAPNLVMSKDPPGPDAFASMPFDSSFSPCTMQKRTRRNKALI 55
A HA+ A + SVL P AP+ + S PG P D++ P + + +
Sbjct: 376 ASFHAAANAALSSVLLSPLAPDALTSTAAPGLAPDTLAPTDAAAPPTAVAAFFAVSSTAV 197
Query: 54 ALF 46
A F
Sbjct: 196 AAF 188
>gb|AY091200.1| Arabidopsis thaliana putative exopolygalacturonase (At3g07850)
mRNA, complete cds
Length = 1366
Score = 189 bits (407), Expect(4) = 7e-093
Identities = 73/160 (45%), Positives = 100/160 (62%)
Frame = +2 / +1
Query: 437 KGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKD 616
K DGQG W N C K C LP ++ + N +++ +T NSK FHMN+ CK+
Sbjct: 487 KAIFDGQGSLAWKANDCAKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKN 666
Query: 617 MLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGPGTSKVNITGVTCGP 796
+ + D+ + AP +S NTDGIH+G S+G+ + I GDDC+SIG GT + + V CGP
Sbjct: 667 ITLSDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGP 846
Query: 797 GHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAY 916
GHGISIGSLGRY +E+ V + V+ C +K T GVRIK +
Sbjct: 847 GHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGVRIKTW 966
Score = 104 bits (222), Expect(4) = 3e-034
Identities = 53/112 (47%), Positives = 62/112 (55%)
Frame = -3 / -3
Query: 915 YALMRTPNIVFLRVQSLTLMSVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQ 736
+ LMRTP VFL LT+ T S Y PRLPM +P PGP T VP PME Q
Sbjct: 965 HVLMRTPLSVFLMRHFLTVTPFTGCSLGYLPRLPMEIPCPGPHSTFSTMRFSVPSPMETQ 786
Query: 735 SSPTPMTVLVMVIPDESPMWMPSVLGLSPGAVTVTSLISMSLHRYMFMWKNL 580
SSP + + + P + PMW+PSVL LS GA S M L MFMWK+L
Sbjct: 785 SSPVLIFAPIKLTPLDLPMWIPSVLRLSGGASIPISERVMFLQLRMFMWKSL 630
Score = 103 bits (220), Expect(4) = 7e-093
Identities = 42/106 (39%), Positives = 63/106 (59%)
Frame = +2 / +1
Query: 944 SKIHYENIKMEDSANPIFIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAVSLL 1123
S I +E+I M++ + P+ ID +YCP C A S+V + DVT K I GTS+T AV L+
Sbjct: 991 SNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSQVKLSDVTIKGIKGTSATKVAVKLM 1170
Query: 1124 CTAKVPCTGVTMDDVNVEYSGTNNKTMAICTNAKGSTKGCLKELAC 1261
C+ VPCT + + D+N+ ++G ++ C+N K G L AC
Sbjct: 1171 CSKGVPCTNIALSDINLVHNGKEGPAVSACSNIKPILSGKLVPAAC 1308
Score = 67.0 bits (140), Expect(4) = 7e-093
Identities = 23/60 (38%), Positives = 36/60 (60%)
Frame = +2 / +1
Query: 257 TILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATTDLSQYKDHGNWIEILRVDNLVITG 436
TI +PKG+++V L F GPCKG VT++++GN A + K H WI+ + + + G
Sbjct: 304 TITVPKGEYMVESLEFKGPCKGPVTLELNGNFKAPATVKTTKPHAGWIDFENIADFTLNG 483
Score = 51.0 bits (105), Expect(4) = 3e-034
Identities = 36/107 (33%), Positives = 51/107 (47%)
Frame = -3 / -3
Query: 1257 ASSLRQPLVLPLAFVHIAMVLLLVPLYSTLTSSMVTPVHGTLAVQSRLTASGVEEVPVMF 1078
A+ PL + L H +PL++ L S V GT + TA+ V +VP+M
Sbjct: 1304 AAGTNFPLRIGLMLEHAETAGPSLPLWTKLMSERAILVQGTPLLHISFTATFVADVPLMP 1125
Query: 1077 LKVTSLTVTLEAPLAVHNLLGQYFMSMKMGLAESSILIFS*WILETV 937
L VTS T + A+ GQY SM+ G SI+I S +LE +
Sbjct: 1124 LIVTSDNFTCDGTPALQWP*GQYSWSMRTGRLTLSIVISSKRMLEAM 984
Score = 42.8 bits (87), Expect(4) = 7e-093
Identities = 18/55 (32%), Positives = 24/55 (43%)
Frame = +2 / +1
Query: 98 GEKEESKGIDAKASGPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTI 262
G S G + PG + D+ GA G+ KTD + A AW AC T+
Sbjct: 151 GGAAASVGAKVSGAKPGAAVDVKASGAKGDSKTDDSAAFAAAWKEACAAGSTITV 315
Score = 29.9 bits (59), Expect(4) = 3e-034
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = -3 / -3
Query: 357 ASRLPSTWMVTSPLQGPVKLSCPTRKSPLGMRIV 256
A +LP VT PL GP+ T SP G IV
Sbjct: 404 ALKLPFNSKVTGPLHGPLNSRLSTIYSPFGTVIV 303
Score = 29.0 bits (57), Expect(4) = 3e-034
Identities = 18/63 (28%), Positives = 27/63 (42%)
Frame = -3 / -3
Query: 234 ADAHASCTAFVLSVLPLPEAPNLVMSKDPPGPDAFASMPFDSSFSPCTMQKRTRRNKALI 55
A HA+ A + SVL P AP+ + S PG P D++ P + + +
Sbjct: 287 ASFHAAANAALSSVLLSPLAPDALTSTAAPGLAPDTLAPTDAAAPPTAVAAFFAVSSTAV 108
Query: 54 ALF 46
A F
Sbjct: 107 AAF 99
>ref|NM_128875.1| Arabidopsis thaliana polygalacturonase AT2G33160 mRNA, complete cds
Length = 1995
Score = 254 bits (549), Expect(4) = 5e-092
Identities = 104/216 (48%), Positives = 142/216 (65%)
Frame = +2 / +1
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLL 574
WI VDNL +TG G LDGQG W N C K +C+ L ++ FV + +++G+ +
Sbjct: 334 WILFKYVDNLTVTGGGLLDGQGSYSWPLNDCNKNTNCRTLAMNIGFAFVKSSKINGLRSI 513
Query: 575 NSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGP 754
NSK H N++ +D I VT+TAPGDSPNTDGI +G SS + I N IG GDDCI+I
Sbjct: 514 NSKMGHFNLFSVEDFNITGVTITAPGDSPNTDGIKIGKSSHMQIYNVTIGTGDDCIAILD 693
Query: 755 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASV 934
GTS ++I+ V CGPGHGIS+GSLGRYK+EK+V + V++ + T G+RIK + + S
Sbjct: 694 GTSNLDISDVRCGPGHGISVGSLGRYKEEKNVQGLTVRNSIINGTTDGLRIKTWAKSVSQ 873
Query: 935 LTVSKIHYENIKMEDSANPIFIDMKYCPNKLCTANG 1042
++VS YENI+M + NPI ID +YCP+ C + G
Sbjct: 874 ISVSNFLYENIQMINVGNPIVIDQQYCPHGQCDSPG 981
Score = 136 bits (292), Expect = 2e-030
Identities = 82/215 (38%), Positives = 110/215 (51%)
Frame = -3 / -2
Query: 1029 HNLLGQYFMSMKMGLAESSILIFS*WILETVSTEAASSYALMRTPNIVFLRVQSLTLMSV 850
H GQY SM +G I +FS ET + ++ L+R P++V L ++ LT+
Sbjct: 968 HCPCGQYC*SMTIGFPTLIIWMFSYKKFETEICDTDLAHVLIRKPSVVPLIIEFLTVKPW 789
Query: 849 TSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVIPDESPMWMP 670
T FSSLY PRLP L+P PGP +T + L VP + +QSSP P+ L + I + P+ +P
Sbjct: 788 TFFSSLYLPRLPTLIPCPGPHLTSEISKLLVPSRIAIQSSPVPIVTL*ICIWLDFPILIP 609
Query: 669 SVLGLSPGAVTVTSLISMSLHRYMFMWKNLELSSVTPDTSPLFTKSITSELGRILQSYFL 490
SVLGLSPGAV VT ++ S L L + P TK+ + + Q FL
Sbjct: 608 SVLGLSPGAVMVTPVMLKSSTENKLKCPILLLMDLRPLIFDDLTKANPMFIASVRQLVFL 429
Query: 489 VQEFLLHTAGPCPSRFPLPVMTRLSTRRISIQLPW 385
+Q P PS P PV RLST SI W
Sbjct: 428 LQSLRGQE*DP*PSSNPPPVTVRLSTYLKSIHSSW 324
Score = 69.8 bits (146), Expect(4) = 5e-092
Identities = 27/73 (36%), Positives = 42/73 (57%)
Frame = +2 / +1
Query: 1043 ASKVTVKDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNVEYSGTNNKTMAICTNA 1222
AS V +KDV + NI GTS++ EA+ + C+ PC V + ++N+ Y G + A+C N
Sbjct: 988 ASHVQIKDVKYNNIWGTSTSKEALKMQCSKTFPCQDVELSNINLHYVGRDGLVTALCENV 1167
Query: 1223 KGSTKGCLKELAC 1261
GS +G + C
Sbjct: 1168 GGSIRGKIVPANC 1206
Score = 47.3 bits (97), Expect(4) = 5e-092
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +2 / +1
Query: 248 GKQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLA 358
G+ T+ IP G F + Q+ F+GPCK +T + G LLA
Sbjct: 190 GRSTVYIPSGIFYLRQVTFSGPCKSSITFFIRGTLLA 300
Score = 28.6 bits (56), Expect(4) = 5e-092
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +2 / +1
Query: 155 FDITKLGASGNGKTDSTKAVQEAWASAC 238
FD+ GA + + D+ A +AW AC
Sbjct: 94 FDVRNYGARADSQRDNAFAFTKAWNEAC 177
>gb|AY062447.1| Arabidopsis thaliana polygalacturonase; pectinase (At3g14060;
MDC16.18) mRNA, complete cds
Length = 1667
Score = 188 bits (406), Expect(4) = 9e-092
Identities = 73/160 (45%), Positives = 100/160 (62%)
Frame = +2 / +1
Query: 437 KGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKD 616
K DGQG W N C K C LP ++ + N +++ +T NSK FHMN+ CK+
Sbjct: 580 KAIFDGQGSLAWKANDCAKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKN 759
Query: 617 MLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGPGTSKVNITGVTCGP 796
+ + D+ + AP +S NTDGIH+G S+G+ + I GDDC+SIG GT + + V CGP
Sbjct: 760 ITLTDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGP 939
Query: 797 GHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAY 916
GHGISIGSLGRY +E+ V + V+ C +K T GVRIK +
Sbjct: 940 GHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGVRIKTW 1059
Score = 108 bits (230), Expect(4) = 9e-092
Identities = 44/106 (41%), Positives = 64/106 (60%)
Frame = +2 / +1
Query: 944 SKIHYENIKMEDSANPIFIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAVSLL 1123
S I +E+I M++ + P+ ID +YCP C A SKV + DVT KNI GTS+T AV L+
Sbjct: 1084 SNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSKVKLSDVTIKNIKGTSATKVAVKLM 1263
Query: 1124 CTAKVPCTGVTMDDVNVEYSGTNNKTMAICTNAKGSTKGCLKELAC 1261
C+ VPCT + + D+N+ ++G ++ C+N K G L AC
Sbjct: 1264 CSKGVPCTNIALSDINLVHNGKEGPAVSACSNIKPILSGKLVPAAC 1401
Score = 106 bits (226), Expect(3) = 2e-034
Identities = 53/112 (47%), Positives = 63/112 (56%)
Frame = -3 / -1
Query: 915 YALMRTPNIVFLRVQSLTLMSVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQ 736
+ LMRTP VFL LT+ T S Y PRLPM +P PGP T VP PME Q
Sbjct: 1058 HVLMRTPLSVFLMRHFLTVTPFTGCSLGYLPRLPMEIPCPGPHSTFSTMRFSVPSPMETQ 879
Query: 735 SSPTPMTVLVMVIPDESPMWMPSVLGLSPGAVTVTSLISMSLHRYMFMWKNL 580
SSP + + + P + PMW+PSVL LS GA S+ M L MFMWK+L
Sbjct: 878 SSPVLIFAPIKLTPLDLPMWIPSVLRLSGGASIPISVRVMFLQLRMFMWKSL 723
Score = 67.0 bits (140), Expect(4) = 9e-092
Identities = 24/60 (40%), Positives = 36/60 (60%)
Frame = +2 / +1
Query: 257 TILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATTDLSQYKDHGNWIEILRVDNLVITG 436
TI +PKG++LV L F GPCKG VT++++GN A + K H WI+ + + + G
Sbjct: 397 TITVPKGEYLVESLEFKGPCKGPVTLELNGNFKAPATVKTTKPHAGWIDFENLADFTLNG 576
Score = 57.0 bits (118), Expect(3) = 2e-034
Identities = 37/107 (34%), Positives = 52/107 (48%)
Frame = -3 / -1
Query: 1257 ASSLRQPLVLPLAFVHIAMVLLLVPLYSTLTSSMVTPVHGTLAVQSRLTASGVEEVPVMF 1078
A+ PL + L H +PL++ L S V GT + TA+ V +VP+MF
Sbjct: 1397 AAGTNFPLRIGLMLEHAETAGPSLPLWTKLMSERAILVQGTPLLHISFTATFVADVPLMF 1218
Query: 1077 LKVTSLTVTLEAPLAVHNLLGQYFMSMKMGLAESSILIFS*WILETV 937
L VTS T + A+ GQY SM+ G SI+I S +LE +
Sbjct: 1217 LIVTSDNFTFDGTPALQWP*GQYSWSMRTGRLTLSIVISSKRMLEAI 1077
Score = 35.0 bits (70), Expect(4) = 9e-092
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +2 / +1
Query: 146 GGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTI 262
G S D+ GA G+GKTD + A A AC T+
Sbjct: 292 GASLDVKASGAKGDGKTDDSAAFAAARKEACAAGSTITV 408
Score = 32.2 bits (64), Expect(3) = 2e-034
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -3 / -1
Query: 357 ASRLPSTWMVTSPLQGPVKLSCPTRKSPLGMRIV 256
A +LP VT PL GP+ T+ SP G IV
Sbjct: 497 ALKLPFNSKVTGPLHGPLNSRLSTKYSPFGTVIV 396
>gb|AY114635.1| Arabidopsis thaliana polygalacturonase; pectinase (At3g14060) mRNA,
complete cds
Length = 1484
Score = 188 bits (406), Expect(4) = 9e-092
Identities = 73/160 (45%), Positives = 100/160 (62%)
Frame = +2 / +1
Query: 437 KGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKD 616
K DGQG W N C K C LP ++ + N +++ +T NSK FHMN+ CK+
Sbjct: 490 KAIFDGQGSLAWKANDCAKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKN 669
Query: 617 MLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGPGTSKVNITGVTCGP 796
+ + D+ + AP +S NTDGIH+G S+G+ + I GDDC+SIG GT + + V CGP
Sbjct: 670 ITLTDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGP 849
Query: 797 GHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAY 916
GHGISIGSLGRY +E+ V + V+ C +K T GVRIK +
Sbjct: 850 GHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGVRIKTW 969
Score = 108 bits (230), Expect(4) = 9e-092
Identities = 44/106 (41%), Positives = 64/106 (60%)
Frame = +2 / +1
Query: 944 SKIHYENIKMEDSANPIFIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAVSLL 1123
S I +E+I M++ + P+ ID +YCP C A SKV + DVT KNI GTS+T AV L+
Sbjct: 994 SNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSKVKLSDVTIKNIKGTSATKVAVKLM 1173
Query: 1124 CTAKVPCTGVTMDDVNVEYSGTNNKTMAICTNAKGSTKGCLKELAC 1261
C+ VPCT + + D+N+ ++G ++ C+N K G L AC
Sbjct: 1174 CSKGVPCTNIALSDINLVHNGKEGPAVSACSNIKPILSGKLVPAAC 1311
Score = 106 bits (226), Expect(3) = 2e-034
Identities = 53/112 (47%), Positives = 63/112 (56%)
Frame = -3 / -1
Query: 915 YALMRTPNIVFLRVQSLTLMSVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQ 736
+ LMRTP VFL LT+ T S Y PRLPM +P PGP T VP PME Q
Sbjct: 968 HVLMRTPLSVFLMRHFLTVTPFTGCSLGYLPRLPMEIPCPGPHSTFSTMRFSVPSPMETQ 789
Query: 735 SSPTPMTVLVMVIPDESPMWMPSVLGLSPGAVTVTSLISMSLHRYMFMWKNL 580
SSP + + + P + PMW+PSVL LS GA S+ M L MFMWK+L
Sbjct: 788 SSPVLIFAPIKLTPLDLPMWIPSVLRLSGGASIPISVRVMFLQLRMFMWKSL 633
Score = 67.0 bits (140), Expect(4) = 9e-092
Identities = 24/60 (40%), Positives = 36/60 (60%)
Frame = +2 / +1
Query: 257 TILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATTDLSQYKDHGNWIEILRVDNLVITG 436
TI +PKG++LV L F GPCKG VT++++GN A + K H WI+ + + + G
Sbjct: 307 TITVPKGEYLVESLEFKGPCKGPVTLELNGNFKAPATVKTTKPHAGWIDFENLADFTLNG 486
Score = 57.0 bits (118), Expect(3) = 2e-034
Identities = 37/107 (34%), Positives = 52/107 (48%)
Frame = -3 / -1
Query: 1257 ASSLRQPLVLPLAFVHIAMVLLLVPLYSTLTSSMVTPVHGTLAVQSRLTASGVEEVPVMF 1078
A+ PL + L H +PL++ L S V GT + TA+ V +VP+MF
Sbjct: 1307 AAGTNFPLRIGLMLEHAETAGPSLPLWTKLMSERAILVQGTPLLHISFTATFVADVPLMF 1128
Query: 1077 LKVTSLTVTLEAPLAVHNLLGQYFMSMKMGLAESSILIFS*WILETV 937
L VTS T + A+ GQY SM+ G SI+I S +LE +
Sbjct: 1127 LIVTSDNFTFDGTPALQWP*GQYSWSMRTGRLTLSIVISSKRMLEAI 987
Score = 35.0 bits (70), Expect(4) = 9e-092
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +2 / +1
Query: 146 GGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTI 262
G S D+ GA G+GKTD + A A AC T+
Sbjct: 202 GASLDVKASGAKGDGKTDDSAAFAAARKEACAAGSTITV 318
Score = 32.2 bits (64), Expect(3) = 2e-034
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -3 / -1
Query: 357 ASRLPSTWMVTSPLQGPVKLSCPTRKSPLGMRIV 256
A +LP VT PL GP+ T+ SP G IV
Sbjct: 407 ALKLPFNSKVTGPLHGPLNSRLSTKYSPFGTVIV 306
>ref|NM_117928.1| Arabidopsis thaliana polygalacturonase AT4G18180 mRNA, complete cds
Length = 1245
Score = 311 bits (673), Expect(3) = 1e-091
Identities = 124/279 (44%), Positives = 179/279 (64%)
Frame = +2 / +1
Query: 356 ATTDLSQYKDHGNWIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMD 535
A+TDLS+Y+ G WI+ ++ L +TG G DGQG W N+CT +CK+LP SL
Sbjct: 301 ASTDLSKYRSGGGWIQFGWINGLTLTGGGTFDGQGALAWPFNNCTSDSNCKLLPTSLKFV 480
Query: 536 FVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNT 715
+N V ++ +NSKFFH+ + C+D + +TAP DSPNTDGIH+ SS + + +
Sbjct: 481 GMNRTVVRRISSVNSKFFHIALVECRDFKGTRLNITAPSDSPNTDGIHIERSSNVYFSRS 660
Query: 716 VIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMF 895
I GDDC+SIG G S++ IT + CGPGHGIS+GSLGRY +EKDV + VKDC + T
Sbjct: 661 HIATGDDCVSIGQGNSQITITSIKCGPGHGISVGSLGRYPNEKDVNGLVVKDCKISGTTN 840
Query: 896 GVRIKAYEDAASVLTVSKIHYENIKMEDSANPIFIDMKYCPNKLCTANGASKVTVKDVTF 1075
G+RIK + ++ + + + +ENI M + NPI ID YCP C +N SKV + ++ F
Sbjct: 841 GIRIKTWANSPGLSAATNMTFENIIMNNVTNPIIIDQSYCPFSSCISNVPSKVELSEIYF 1020
Query: 1076 KNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNVEYSGTN 1192
KNI GTSS+ AV L C+ +PC V +++V+++ S ++
Sbjct: 1021 KNIRGTSSSLVAVQLHCSRGMPCKKVYLENVHLDLSSSD 1137
Score = 102 bits (217), Expect(3) = 2e-032
Identities = 57/147 (38%), Positives = 79/147 (53%)
Frame = -3 / -2
Query: 1167 TSSMVTPVHGTLAVQSRLTASGVEEVPVMFLKVTSLTVTLEAPLAVHNLLGQYFMSMKMG 988
T S T +HG +Q TA+ ++VP++FLK SL+ T E + GQ SM +G
Sbjct: 1112 TFSKYTFLHGIPLLQCSCTATSEDDVPLIFLKYISLSSTFEGTFEMQEEKGQ*D*SMMIG 933
Query: 987 LAESSILIFS*WILETVSTEAASSYALMRTPNIVFLRVQSLTLMSVTSFSSLYRPRLPML 808
L I+IFS +L + L+ P +V L +QS T +TSFS Y P+LP L
Sbjct: 932 LVTLFIIIFSKVMLVAALRPGELAQVLILIPFVVPLILQSFTTSPLTSFSFGYLPKLPTL 753
Query: 807 MPWPGPQVTPVMFTLEVPGPMEMQSSP 727
+P PGP + V+ E P P+E QSSP
Sbjct: 752 IPCPGPHLILVIVI*EFPCPIETQSSP 672
Score = 51.9 bits (107), Expect(3) = 2e-032
Identities = 39/107 (36%), Positives = 51/107 (47%)
Frame = -3 / -2
Query: 675 MPSVLGLSPGAVTVTSLISMSLHRYMFMWKNLELSSVTPDTSPLFTKSITSELGRILQSY 496
+PSV GLS GAV ++ + SLH + KNL + + T+ LF + +GR LQ
Sbjct: 620 IPSVFGLSEGAVMLSLVPLKSLHSTNAI*KNLLFTELILLTTVLFIPTNFKLVGRSLQLE 441
Query: 495 FLVQEFLLHTAGPCPSRFPLPVMTRLSTRRISIQLPWSLYWLRSVVA 355
VQ P PS P PV + IQ P LY+ RSV A
Sbjct: 440 SEVQLLNGQAKAP*PSNVPPPVRVKPLIHPN*IQPPPDLYFDRSVDA 300
Score = 35.9 bits (72), Expect(3) = 1e-091
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +2 / +1
Query: 260 ILIPKGDFLVGQLNFTGPC 316
++IP+G+F VG L F+GPC
Sbjct: 211 LIIPRGEFSVGSLRFSGPC 267
Score = 32.7 bits (65), Expect(3) = 1e-091
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = +2 / +1
Query: 158 DITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILI 268
D+ GA N D TKA AW AC + LI
Sbjct: 106 DVRSFGARANDHRDHTKAFVAAWDKACKSSSSSVNLI 216
Score = 26.3 bits (51), Expect(3) = 2e-032
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3 / -2
Query: 348 LPSTWMVTSPLQGPVKLSCPTRKSPLGM 265
L T + + +QGP L PT SPLG+
Sbjct: 299 LTRTVRLDTLVQGPENLREPTENSPLGI 216
>gb|AF428425.1|AF428425 Arabidopsis thaliana At1g02790/T14P4_2 mRNA, complete cds
Length = 1571
Score = 212 bits (458), Expect(4) = 6e-091
Identities = 78/174 (44%), Positives = 123/174 (70%)
Frame = +2 / +1
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLL 574
W RVDNLV+TG G G+G AVW + C KK C + P SL + N E++G++ +
Sbjct: 454 WFLFERVDNLVLTGTGTFHGKGEAVWKADGCGKKVQCNLPPTSLKFRNMKNVEINGISSV 633
Query: 575 NSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGP 754
N+K FHM + + +++ I+++ +TAP +SPNTDGIH+ ++ ++I ++ I GDDC+S+G
Sbjct: 634 NAKAFHMFLVKTENVNIQNIKLTAPAESPNTDGIHLSNADNVSILDSTIATGDDCVSVGR 813
Query: 755 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAY 916
G++ V + V CGPGHG+S+GSLG+YK+E+DV+ I+V +CT+ +T G+RIK +
Sbjct: 814 GSNNVTVERVICGPGHGLSVGSLGKYKNEEDVSGIHVNNCTMIETDNGLRIKTW 975
Score = 90.9 bits (192), Expect(4) = 7e-042
Identities = 46/106 (43%), Positives = 60/106 (56%)
Frame = -3 / -1
Query: 951 ILETVSTEAASSYALMRTPNIVFLRVQSLTLMSVTSFSSLYRPRLPMLMPWPGPQVTPVM 772
++ T + + L+ P V + VQ LT + +TS S LY PRLP L P PGPQ+T
Sbjct: 1010 LMSTALLGSDPPHVLILRPLSVSIIVQLLTWIPLTSSSFLYLPRLPTLRPCPGPQITRST 831
Query: 771 FTLEVPGPMEMQSSPTPMTVLVMVIPDESPMWMPSVLGLSPGAVTV 634
TL P P E QSSP M + M+ W+PSVLGLS GAV++
Sbjct: 830 VTLLEPRPTETQSSPVAMVLSRMLTLSALLKWIPSVLGLSAGAVSL 693
Score = 90.9 bits (192), Expect(4) = 6e-091
Identities = 39/93 (41%), Positives = 52/93 (55%)
Frame = +2 / +1
Query: 86 CIVHGEKEESKGIDAKASGPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTIL 265
C+ +GE + A SG +DITK GA G+G T++ KA W C T+L
Sbjct: 154 CVANGEYLGGRRGLAANSGNPTVYDITKFGAVGDGSTNTFKAFLNTWIQVCDSPVPATLL 333
Query: 266 IPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATT 364
+PKG FL G + F GPCK VT+ V G ++ATT
Sbjct: 334 VPKGTFLAGPVIFAGPCKSKVTVNVIGTIIATT 432
Score = 64.3 bits (134), Expect(4) = 6e-091
Identities = 23/49 (46%), Positives = 34/49 (69%)
Frame = +2 / +1
Query: 1040 GASKVTVKDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNVEYSG 1186
G S+V + D+ FKNI GT+ T + V ++C+ VPC GV + DVN++Y G
Sbjct: 1081 GDSQVAISDILFKNIRGTTITKDVVQIMCSKSVPCQGVNVVDVNLDYVG 1227
Score = 52.8 bits (109), Expect(4) = 7e-042
Identities = 33/94 (35%), Positives = 42/94 (44%)
Frame = -3 / -1
Query: 363 VVASRLPSTWMVTSPLQGPVKLSCPTRKSPLGMRIVCFPVPPHADAHASCTAFVLSVLPL 184
VVA +P T VT L GP K++ P + PLG V H H A + V P
Sbjct: 431 VVAMIVPITLTVTLLLHGPAKMTGPAKNVPLGTSSVAGTGLSHTCIHVFKNALKVLVEPS 252
Query: 183 PEAPNLVMSKDPPGPDAFASMPFDSSFSPCTMQK 82
P APNLV+S P+ A +SP Q+
Sbjct: 251 PTAPNLVIS*TVGLPELAARPRRPPRYSPLATQE 150
Score = 46.0 bits (94), Expect(4) = 7e-042
Identities = 24/62 (38%), Positives = 29/62 (46%)
Frame = -3 / -1
Query: 594 MWKNLELSSVTPDTSPLFTKSITSELGRILQSYFLVQEFLLHTAGPCPSRFPLPVMTRLS 415
MWK + + P S F ++G L FL Q TA P P P+PV TRLS
Sbjct: 653 MWKAFAFTELMPLISTFFMFLNLRDVGGRLHWTFLPQPSAFQTASPFPWNVPVPVRTRLS 474
Query: 414 TR 409
TR
Sbjct: 473 TR 468
Score = 40.9 bits (83), Expect(4) = 7e-042
Identities = 22/51 (43%), Positives = 28/51 (54%)
Frame = -3 / -1
Query: 1191 LVPLYSTLTSSMVTPVHGTLAVQSRLTASGVEEVPVMFLKVTSLTVTLEAP 1039
++P S TS+ TP HGT + T S V VP+MFL SL T E+P
Sbjct: 1232 VLPT*SKFTSTTFTPWHGTDLLHII*TTSFVIVVPLMFLNKISLIATCESP 1080
Score = 28.6 bits (56), Expect(4) = 6e-091
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2 / +1
Query: 950 IHYENIKMEDSANPIFIDMKY 1012
I +ENI M+ NPI ID Y
Sbjct: 1006 IKFENIIMQSVKNPIIIDQNY 1068
>ref|NM_100158.1| Arabidopsis thaliana PGA4 (POLYGALACTURONASE 4); polygalacturonase
AT1G02790 (PGA4) mRNA, complete cds
Length = 1571
Score = 212 bits (458), Expect(4) = 6e-091
Identities = 78/174 (44%), Positives = 123/174 (70%)
Frame = +2 / +1
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLL 574
W RVDNLV+TG G G+G AVW + C KK C + P SL + N E++G++ +
Sbjct: 454 WFLFERVDNLVLTGTGTFHGKGEAVWKADGCGKKVQCNLPPTSLKFRNMKNVEINGISSV 633
Query: 575 NSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGP 754
N+K FHM + + +++ I+++ +TAP +SPNTDGIH+ ++ ++I ++ I GDDC+S+G
Sbjct: 634 NAKAFHMFLVKTENVNIQNIKLTAPAESPNTDGIHLSNADNVSILDSTIATGDDCVSVGR 813
Query: 755 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAY 916
G++ V + V CGPGHG+S+GSLG+YK+E+DV+ I+V +CT+ +T G+RIK +
Sbjct: 814 GSNNVTVERVICGPGHGLSVGSLGKYKNEEDVSGIHVNNCTMIETDNGLRIKTW 975
Score = 90.9 bits (192), Expect(4) = 7e-042
Identities = 46/106 (43%), Positives = 60/106 (56%)
Frame = -3 / -1
Query: 951 ILETVSTEAASSYALMRTPNIVFLRVQSLTLMSVTSFSSLYRPRLPMLMPWPGPQVTPVM 772
++ T + + L+ P V + VQ LT + +TS S LY PRLP L P PGPQ+T
Sbjct: 1010 LMSTALLGSDPPHVLILRPLSVSIIVQLLTWIPLTSSSFLYLPRLPTLRPCPGPQITRST 831
Query: 771 FTLEVPGPMEMQSSPTPMTVLVMVIPDESPMWMPSVLGLSPGAVTV 634
TL P P E QSSP M + M+ W+PSVLGLS GAV++
Sbjct: 830 VTLLEPRPTETQSSPVAMVLSRMLTLSALLKWIPSVLGLSAGAVSL 693
Score = 90.9 bits (192), Expect(4) = 6e-091
Identities = 39/93 (41%), Positives = 52/93 (55%)
Frame = +2 / +1
Query: 86 CIVHGEKEESKGIDAKASGPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTIL 265
C+ +GE + A SG +DITK GA G+G T++ KA W C T+L
Sbjct: 154 CVANGEYLGGRRGLAANSGNPTVYDITKFGAVGDGSTNTFKAFLNTWIQVCDSPVPATLL 333
Query: 266 IPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATT 364
+PKG FL G + F GPCK VT+ V G ++ATT
Sbjct: 334 VPKGTFLAGPVIFAGPCKSKVTVNVIGTIIATT 432
Score = 64.3 bits (134), Expect(4) = 6e-091
Identities = 23/49 (46%), Positives = 34/49 (69%)
Frame = +2 / +1
Query: 1040 GASKVTVKDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNVEYSG 1186
G S+V + D+ FKNI GT+ T + V ++C+ VPC GV + DVN++Y G
Sbjct: 1081 GDSQVAISDILFKNIRGTTITKDVVQIMCSKSVPCQGVNVVDVNLDYVG 1227
Score = 52.8 bits (109), Expect(4) = 7e-042
Identities = 33/94 (35%), Positives = 42/94 (44%)
Frame = -3 / -1
Query: 363 VVASRLPSTWMVTSPLQGPVKLSCPTRKSPLGMRIVCFPVPPHADAHASCTAFVLSVLPL 184
VVA +P T VT L GP K++ P + PLG V H H A + V P
Sbjct: 431 VVAMIVPITLTVTLLLHGPAKMTGPAKNVPLGTSSVAGTGLSHTCIHVFKNALKVLVEPS 252
Query: 183 PEAPNLVMSKDPPGPDAFASMPFDSSFSPCTMQK 82
P APNLV+S P+ A +SP Q+
Sbjct: 251 PTAPNLVIS*TVGLPELAARPRRPPRYSPLATQE 150
Score = 46.0 bits (94), Expect(4) = 7e-042
Identities = 24/62 (38%), Positives = 29/62 (46%)
Frame = -3 / -1
Query: 594 MWKNLELSSVTPDTSPLFTKSITSELGRILQSYFLVQEFLLHTAGPCPSRFPLPVMTRLS 415
MWK + + P S F ++G L FL Q TA P P P+PV TRLS
Sbjct: 653 MWKAFAFTELMPLISTFFMFLNLRDVGGRLHWTFLPQPSAFQTASPFPWNVPVPVRTRLS 474
Query: 414 TR 409
TR
Sbjct: 473 TR 468
Score = 40.9 bits (83), Expect(4) = 7e-042
Identities = 22/51 (43%), Positives = 28/51 (54%)
Frame = -3 / -1
Query: 1191 LVPLYSTLTSSMVTPVHGTLAVQSRLTASGVEEVPVMFLKVTSLTVTLEAP 1039
++P S TS+ TP HGT + T S V VP+MFL SL T E+P
Sbjct: 1232 VLPT*SKFTSTTFTPWHGTDLLHII*TTSFVIVVPLMFLNKISLIATCESP 1080
Score = 28.6 bits (56), Expect(4) = 6e-091
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2 / +1
Query: 950 IHYENIKMEDSANPIFIDMKY 1012
I +ENI M+ NPI ID Y
Sbjct: 1006 IKFENIIMQSVKNPIIIDQNY 1068
>gb|AY065210.1| Arabidopsis thaliana putative polygalacturonase (At1g02790) mRNA,
complete cds
Length = 1561
Score = 212 bits (458), Expect(4) = 6e-091
Identities = 78/174 (44%), Positives = 123/174 (70%)
Frame = +2 / +1
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLL 574
W RVDNLV+TG G G+G AVW + C KK C + P SL + N E++G++ +
Sbjct: 454 WFLFERVDNLVLTGTGTFHGKGEAVWKADGCGKKVQCNLPPTSLKFRNMKNVEINGISSV 633
Query: 575 NSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGP 754
N+K FHM + + +++ I+++ +TAP +SPNTDGIH+ ++ ++I ++ I GDDC+S+G
Sbjct: 634 NAKAFHMFLVKTENVNIQNIKLTAPAESPNTDGIHLSNADNVSILDSTIATGDDCVSVGR 813
Query: 755 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAY 916
G++ V + V CGPGHG+S+GSLG+YK+E+DV+ I+V +CT+ +T G+RIK +
Sbjct: 814 GSNNVTVERVICGPGHGLSVGSLGKYKNEEDVSGIHVNNCTMIETDNGLRIKTW 975
Score = 90.9 bits (192), Expect(4) = 7e-042
Identities = 46/106 (43%), Positives = 60/106 (56%)
Frame = -3 / -3
Query: 951 ILETVSTEAASSYALMRTPNIVFLRVQSLTLMSVTSFSSLYRPRLPMLMPWPGPQVTPVM 772
++ T + + L+ P V + VQ LT + +TS S LY PRLP L P PGPQ+T
Sbjct: 1010 LMSTALLGSDPPHVLILRPLSVSIIVQLLTWIPLTSSSFLYLPRLPTLRPCPGPQITRST 831
Query: 771 FTLEVPGPMEMQSSPTPMTVLVMVIPDESPMWMPSVLGLSPGAVTV 634
TL P P E QSSP M + M+ W+PSVLGLS GAV++
Sbjct: 830 VTLLEPRPTETQSSPVAMVLSRMLTLSALLKWIPSVLGLSAGAVSL 693
Score = 90.9 bits (192), Expect(4) = 6e-091
Identities = 39/93 (41%), Positives = 52/93 (55%)
Frame = +2 / +1
Query: 86 CIVHGEKEESKGIDAKASGPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTIL 265
C+ +GE + A SG +DITK GA G+G T++ KA W C T+L
Sbjct: 154 CVANGEYLGGRRGLAANSGNPTVYDITKFGAVGDGSTNTFKAFLNTWIQVCDSPVPATLL 333
Query: 266 IPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATT 364
+PKG FL G + F GPCK VT+ V G ++ATT
Sbjct: 334 VPKGTFLAGPVIFAGPCKSKVTVNVIGTIIATT 432
Score = 64.3 bits (134), Expect(4) = 6e-091
Identities = 23/49 (46%), Positives = 34/49 (69%)
Frame = +2 / +1
Query: 1040 GASKVTVKDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNVEYSG 1186
G S+V + D+ FKNI GT+ T + V ++C+ VPC GV + DVN++Y G
Sbjct: 1081 GDSQVAISDILFKNIRGTTITKDVVQIMCSKSVPCQGVNVVDVNLDYVG 1227
Score = 52.8 bits (109), Expect(4) = 7e-042
Identities = 33/94 (35%), Positives = 42/94 (44%)
Frame = -3 / -3
Query: 363 VVASRLPSTWMVTSPLQGPVKLSCPTRKSPLGMRIVCFPVPPHADAHASCTAFVLSVLPL 184
VVA +P T VT L GP K++ P + PLG V H H A + V P
Sbjct: 431 VVAMIVPITLTVTLLLHGPAKMTGPAKNVPLGTSSVAGTGLSHTCIHVFKNALKVLVEPS 252
Query: 183 PEAPNLVMSKDPPGPDAFASMPFDSSFSPCTMQK 82
P APNLV+S P+ A +SP Q+
Sbjct: 251 PTAPNLVIS*TVGLPELAARPRRPPRYSPLATQE 150
Score = 46.0 bits (94), Expect(4) = 7e-042
Identities = 24/62 (38%), Positives = 29/62 (46%)
Frame = -3 / -3
Query: 594 MWKNLELSSVTPDTSPLFTKSITSELGRILQSYFLVQEFLLHTAGPCPSRFPLPVMTRLS 415
MWK + + P S F ++G L FL Q TA P P P+PV TRLS
Sbjct: 653 MWKAFAFTELMPLISTFFMFLNLRDVGGRLHWTFLPQPSAFQTASPFPWNVPVPVRTRLS 474
Query: 414 TR 409
TR
Sbjct: 473 TR 468
Score = 40.9 bits (83), Expect(4) = 7e-042
Identities = 22/51 (43%), Positives = 28/51 (54%)
Frame = -3 / -3
Query: 1191 LVPLYSTLTSSMVTPVHGTLAVQSRLTASGVEEVPVMFLKVTSLTVTLEAP 1039
++P S TS+ TP HGT + T S V VP+MFL SL T E+P
Sbjct: 1232 VLPT*SKFTSTTFTPWHGTDLLHII*TTSFVIVVPLMFLNKISLIATCESP 1080
Score = 28.6 bits (56), Expect(4) = 6e-091
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2 / +1
Query: 950 IHYENIKMEDSANPIFIDMKY 1012
I +ENI M+ NPI ID Y
Sbjct: 1006 IKFENIIMQSVKNPIIIDQNY 1068
>emb|X72291.1|ATEXOPA A.thaliana (clone GBGe184) mRNA for exopolygalacturonase
Length = 1477
Score = 212 bits (458), Expect(4) = 6e-091
Identities = 78/174 (44%), Positives = 123/174 (70%)
Frame = +2 / +1
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLL 574
W RVDNLV+TG G G+G AVW + C KK C + P SL + N E++G++ +
Sbjct: 442 WFLFERVDNLVLTGTGTFHGKGEAVWKADGCGKKVQCNLPPTSLKFRNMKNVEINGISSV 621
Query: 575 NSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGP 754
N+K FHM + + +++ I+++ +TAP +SPNTDGIH+ ++ ++I ++ I GDDC+S+G
Sbjct: 622 NAKAFHMFLVKTENVNIQNIKLTAPAESPNTDGIHLSNADNVSILDSTIATGDDCVSVGR 801
Query: 755 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAY 916
G++ V + V CGPGHG+S+GSLG+YK+E+DV+ I+V +CT+ +T G+RIK +
Sbjct: 802 GSNNVTVERVICGPGHGLSVGSLGKYKNEEDVSGIHVNNCTMIETDNGLRIKTW 963
Score = 91.3 bits (193), Expect(4) = 5e-042
Identities = 46/106 (43%), Positives = 60/106 (56%)
Frame = -3 / -3
Query: 951 ILETVSTEAASSYALMRTPNIVFLRVQSLTLMSVTSFSSLYRPRLPMLMPWPGPQVTPVM 772
++ T + + L+ P V + VQ LT + +TS S LY PRLP L P PGPQ+T
Sbjct: 998 LMSTALLGSEPPHVLILRPLSVSIIVQLLTWIPLTSSSFLYLPRLPTLRPCPGPQITRST 819
Query: 771 FTLEVPGPMEMQSSPTPMTVLVMVIPDESPMWMPSVLGLSPGAVTV 634
TL P P E QSSP M + M+ W+PSVLGLS GAV++
Sbjct: 818 VTLLEPRPTETQSSPVAMVLSRMLTLSALLKWIPSVLGLSAGAVSL 681
Score = 90.9 bits (192), Expect(4) = 6e-091
Identities = 39/93 (41%), Positives = 52/93 (55%)
Frame = +2 / +1
Query: 86 CIVHGEKEESKGIDAKASGPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTIL 265
C+ +GE + A SG +DITK GA G+G T++ KA W C T+L
Sbjct: 142 CVANGEYLGGRRGLAANSGNPTVYDITKFGAVGDGSTNTFKAFLNTWIQVCDSPVPATLL 321
Query: 266 IPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATT 364
+PKG FL G + F GPCK VT+ V G ++ATT
Sbjct: 322 VPKGTFLAGPVIFAGPCKSKVTVNVIGTIIATT 420
Score = 64.3 bits (134), Expect(4) = 6e-091
Identities = 23/49 (46%), Positives = 34/49 (69%)
Frame = +2 / +1
Query: 1040 GASKVTVKDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNVEYSG 1186
G S+V + D+ FKNI GT+ T + V ++C+ VPC GV + DVN++Y G
Sbjct: 1069 GDSQVAISDILFKNIRGTTITKDVVQIMCSKSVPCQGVNVVDVNLDYVG 1215
Score = 52.8 bits (109), Expect(4) = 5e-042
Identities = 33/94 (35%), Positives = 42/94 (44%)
Frame = -3 / -3
Query: 363 VVASRLPSTWMVTSPLQGPVKLSCPTRKSPLGMRIVCFPVPPHADAHASCTAFVLSVLPL 184
VVA +P T VT L GP K++ P + PLG V H H A + V P
Sbjct: 419 VVAMIVPITLTVTLLLHGPAKMTGPAKNVPLGTSSVAGTGLSHTCIHVFKNALKVLVEPS 240
Query: 183 PEAPNLVMSKDPPGPDAFASMPFDSSFSPCTMQK 82
P APNLV+S P+ A +SP Q+
Sbjct: 239 PTAPNLVIS*TVGLPELAARPRRPPRYSPLATQE 138
Score = 46.0 bits (94), Expect(4) = 5e-042
Identities = 24/62 (38%), Positives = 29/62 (46%)
Frame = -3 / -3
Query: 594 MWKNLELSSVTPDTSPLFTKSITSELGRILQSYFLVQEFLLHTAGPCPSRFPLPVMTRLS 415
MWK + + P S F ++G L FL Q TA P P P+PV TRLS
Sbjct: 641 MWKAFAFTELMPLISTFFMFLNLRDVGGRLHWTFLPQPSAFQTASPFPWNVPVPVRTRLS 462
Query: 414 TR 409
TR
Sbjct: 461 TR 456
Score = 40.9 bits (83), Expect(4) = 5e-042
Identities = 22/51 (43%), Positives = 28/51 (54%)
Frame = -3 / -3
Query: 1191 LVPLYSTLTSSMVTPVHGTLAVQSRLTASGVEEVPVMFLKVTSLTVTLEAP 1039
++P S TS+ TP HGT + T S V VP+MFL SL T E+P
Sbjct: 1220 VLPT*SKFTSTTFTPWHGTDLLHII*TTSFVIVVPLMFLNKISLIATCESP 1068
Score = 28.6 bits (56), Expect(4) = 6e-091
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2 / +1
Query: 950 IHYENIKMEDSANPIFIDMKY 1012
I +ENI M+ NPI ID Y
Sbjct: 994 IKFENIIMQSVKNPIIIDQNY 1056
>gb|AY133812.1| Arabidopsis thaliana clone U18487 putative polygalacturonase
(At1g02790) mRNA, complete cds
Length = 1300
Score = 212 bits (458), Expect(4) = 6e-091
Identities = 78/174 (44%), Positives = 123/174 (70%)
Frame = +2 / +1
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLL 574
W RVDNLV+TG G G+G AVW + C KK C + P SL + N E++G++ +
Sbjct: 385 WFLFERVDNLVLTGTGTFHGKGEAVWKADGCGKKVQCNLPPTSLKFRNMKNVEINGISSV 564
Query: 575 NSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGP 754
N+K FHM + + +++ I+++ +TAP +SPNTDGIH+ ++ ++I ++ I GDDC+S+G
Sbjct: 565 NAKAFHMFLVKTENVNIQNIKLTAPAESPNTDGIHLSNADNVSILDSTIATGDDCVSVGR 744
Query: 755 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAY 916
G++ V + V CGPGHG+S+GSLG+YK+E+DV+ I+V +CT+ +T G+RIK +
Sbjct: 745 GSNNVTVERVICGPGHGLSVGSLGKYKNEEDVSGIHVNNCTMIETDNGLRIKTW 906
Score = 90.9 bits (192), Expect(4) = 7e-042
Identities = 46/106 (43%), Positives = 60/106 (56%)
Frame = -3 / -3
Query: 951 ILETVSTEAASSYALMRTPNIVFLRVQSLTLMSVTSFSSLYRPRLPMLMPWPGPQVTPVM 772
++ T + + L+ P V + VQ LT + +TS S LY PRLP L P PGPQ+T
Sbjct: 941 LMSTALLGSDPPHVLILRPLSVSIIVQLLTWIPLTSSSFLYLPRLPTLRPCPGPQITRST 762
Query: 771 FTLEVPGPMEMQSSPTPMTVLVMVIPDESPMWMPSVLGLSPGAVTV 634
TL P P E QSSP M + M+ W+PSVLGLS GAV++
Sbjct: 761 VTLLEPRPTETQSSPVAMVLSRMLTLSALLKWIPSVLGLSAGAVSL 624
Score = 90.9 bits (192), Expect(4) = 6e-091
Identities = 39/93 (41%), Positives = 52/93 (55%)
Frame = +2 / +1
Query: 86 CIVHGEKEESKGIDAKASGPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTIL 265
C+ +GE + A SG +DITK GA G+G T++ KA W C T+L
Sbjct: 85 CVANGEYLGGRRGLAANSGNPTVYDITKFGAVGDGSTNTFKAFLNTWIQVCDSPVPATLL 264
Query: 266 IPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATT 364
+PKG FL G + F GPCK VT+ V G ++ATT
Sbjct: 265 VPKGTFLAGPVIFAGPCKSKVTVNVIGTIIATT 363
Score = 64.3 bits (134), Expect(4) = 6e-091
Identities = 23/49 (46%), Positives = 34/49 (69%)
Frame = +2 / +1
Query: 1040 GASKVTVKDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNVEYSG 1186
G S+V + D+ FKNI GT+ T + V ++C+ VPC GV + DVN++Y G
Sbjct: 1012 GDSQVAISDILFKNIRGTTITKDVVQIMCSKSVPCQGVNVVDVNLDYVG 1158
Score = 52.8 bits (109), Expect(4) = 7e-042
Identities = 33/94 (35%), Positives = 42/94 (44%)
Frame = -3 / -3
Query: 363 VVASRLPSTWMVTSPLQGPVKLSCPTRKSPLGMRIVCFPVPPHADAHASCTAFVLSVLPL 184
VVA +P T VT L GP K++ P + PLG V H H A + V P
Sbjct: 362 VVAMIVPITLTVTLLLHGPAKMTGPAKNVPLGTSSVAGTGLSHTCIHVFKNALKVLVEPS 183
Query: 183 PEAPNLVMSKDPPGPDAFASMPFDSSFSPCTMQK 82
P APNLV+S P+ A +SP Q+
Sbjct: 182 PTAPNLVIS*TVGLPELAARPRRPPRYSPLATQE 81
Score = 46.0 bits (94), Expect(4) = 7e-042
Identities = 24/62 (38%), Positives = 29/62 (46%)
Frame = -3 / -3
Query: 594 MWKNLELSSVTPDTSPLFTKSITSELGRILQSYFLVQEFLLHTAGPCPSRFPLPVMTRLS 415
MWK + + P S F ++G L FL Q TA P P P+PV TRLS
Sbjct: 584 MWKAFAFTELMPLISTFFMFLNLRDVGGRLHWTFLPQPSAFQTASPFPWNVPVPVRTRLS 405
Query: 414 TR 409
TR
Sbjct: 404 TR 399
Score = 40.9 bits (83), Expect(4) = 7e-042
Identities = 22/51 (43%), Positives = 28/51 (54%)
Frame = -3 / -3
Query: 1191 LVPLYSTLTSSMVTPVHGTLAVQSRLTASGVEEVPVMFLKVTSLTVTLEAP 1039
++P S TS+ TP HGT + T S V VP+MFL SL T E+P
Sbjct: 1163 VLPT*SKFTSTTFTPWHGTDLLHII*TTSFVIVVPLMFLNKISLIATCESP 1011
Score = 28.6 bits (56), Expect(4) = 6e-091
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2 / +1
Query: 950 IHYENIKMEDSANPIFIDMKY 1012
I +ENI M+ NPI ID Y
Sbjct: 937 IKFENIIMQSVKNPIIIDQNY 999
>ref|NM_101576.1| Arabidopsis thaliana polygalacturonase AT1G17150 mRNA, complete cds
Length = 1209
Score = 278 bits (602), Expect(2) = 8e-091
Identities = 119/282 (42%), Positives = 163/282 (57%)
Frame = +2 / +1
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLL 574
WI ++ L + G G LDGQG WS C K +C L ++ DFV N ++G+T L
Sbjct: 334 WINFRYINYLTVFGDGTLDGQGKKSWSLIDCQKDNNCPKLAINMGFDFVKNSSMNGITSL 513
Query: 575 NSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGP 754
NSK H N I V + AP +SPNTDGI + SS + I+NT I GDDCI++
Sbjct: 514 NSKAGHFNFLSVDHFSITRVNIIAPSNSPNTDGIKIALSSNMQISNTHISTGDDCIAMLS 693
Query: 755 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASV 934
G + +I V CGPGHGISIGSLG+ KDEK+V + V++ T G+RIK +E +AS
Sbjct: 694 GNTNFDIYNVKCGPGHGISIGSLGKNKDEKNVNGLMVRNSVFTGTTNGIRIKTWESSAST 873
Query: 935 LTVSKIHYENIKMEDSANPIFIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAV 1114
+ + + YEN++M + NPI ID KYCP C+ G S + +++VT KNI GTS AV
Sbjct: 874 IRIINLVYENLQMINVENPIGIDQKYCPYPPCSNMGDSHIQIRNVTLKNIWGTSKNKVAV 1053
Query: 1115 SLLCTAKVPCTGVTMDDVNVEYSGTNNKTMAICTNAKGSTKG 1240
C+ PC V + D+N+ + G + A+C N GS G
Sbjct: 1054 KFQCSKTFPCKDVQLIDINLTHHGVDGPASALCENVDGSATG 1179
Score = 117 bits (251), Expect(3) = 6e-037
Identities = 71/203 (34%), Positives = 106/203 (52%)
Frame = -3 / -2
Query: 1239 PLVLPLAFVHIAMVLLLVPLYSTLTSSMVTPVHGTLAVQSRLTASGVEEVPVMFLKVTSL 1060
P+ P F H A+ P L S T + G + + TA+ +VP MF VT
Sbjct: 1178 PVADPSTFSHNALAGPSTPW*VKLMSIN*TSLQGKVLLH*NFTATLFFDVPQMFFSVTFR 999
Query: 1059 TVTLEAPLAVHNLLGQYFMSMKMGLAESSILIFS*WILETVSTEAASSYALMRTPNIVFL 880
E+P+ +H GQYF SM +G + I FS L EA S+ L+R P +V +
Sbjct: 998 I*M*ESPILLHGG*GQYF*SMPIGFSTFIICRFSYTKLIIRIVEAEDSHVLIRIPLVVPV 819
Query: 879 RVQSLTLMSVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMV 700
+ + LT+ +T FSSL+ P+LP+L+P PGP +T + P + +QSSP M V +
Sbjct: 818 KTEFLTIKPLTFFSSLFFPKLPILIPCPGPHLTL*ISKFVFPESIAIQSSPVLM*VFEIC 639
Query: 699 IPDESPMWMPSVLGLSPGAVTVT 631
+ + + +PSVLGL GA+ +T
Sbjct: 638 MLLDKAILIPSVLGLLLGAIMLT 570
Score = 79.4 bits (167), Expect(2) = 8e-091
Identities = 30/68 (44%), Positives = 39/68 (57%)
Frame = +2 / +1
Query: 155 FDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGPCKGDVTI 334
FD+ GA G+GK D+T A AW AC G + IP G F +G + F GPC G ++
Sbjct: 97 FDVRSYGAKGDGKMDNTNAFTNAWKDACRWNGPSKMYIPLGTFYLGGVTFVGPCDGKISF 276
Query: 335 QVDGNLLA 358
+DG LLA
Sbjct: 277 VIDGTLLA 300
Score = 50.6 bits (104), Expect(3) = 6e-037
Identities = 25/62 (40%), Positives = 32/62 (51%)
Frame = -3 / -2
Query: 357 ASRLPSTWMVTSPLQGPVKLSCPTRKSPLGMRIVCFPVPPHADAHASCTAFVLSVLPLPE 178
A+++PS P GP ++ P P GM I+ P HA HA A VLS+LP P
Sbjct: 299 ANKVPSMTNEILPSHGPTNVTPPR*NVPSGMYILLGPFHLHASFHAFVNALVLSILPSPL 120
Query: 177 AP 172
AP
Sbjct: 119 AP 114
Score = 27.6 bits (54), Expect(3) = 6e-037
Identities = 19/54 (35%), Positives = 21/54 (38%)
Frame = -3 / -2
Query: 582 LELSSVTPDTSPLFTKSITSELGRILQSYFLVQEFLLHTAGPCPSRFPLPVMTR 421
L LS V P FTKS + + Q Q H P PSR P P R
Sbjct: 521 LLLSDVIPFMLEFFTKSNPIFIASLGQLLSFWQSISDHDFFPWPSRVPSPKTVR 360
>ref|NM_106487.2| Arabidopsis thaliana polygalacturonase AT1G78400 mRNA, complete cds
Length = 1215
Score = 275 bits (595), Expect(2) = 3e-090
Identities = 115/290 (39%), Positives = 170/290 (58%)
Frame = +2 / +1
Query: 392 NWIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTL 571
+WI VD L ++G G LDGQG W N+C + ++C+ LP ++ FV ++ +
Sbjct: 337 SWIIFRYVDYLTVSGGGILDGQGSYSWPLNNCRQTHNCRALPMNMGFQFVRFSRLTRIKS 516
Query: 572 LNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIG 751
+NSK H+N + + I V + APGDSPNTDGI +G S+ + I + I GDDCI+I
Sbjct: 517 INSKMGHLNFFSVQHFDITRVNIKAPGDSPNTDGIKIGSSNHMKIHHVDIATGDDCIAIL 696
Query: 752 PGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAAS 931
GT ++I V CGPGHGIS+GSLG++K EK V + V++ T GVRIK +
Sbjct: 697 SGTFNLDINKVNCGPGHGISVGSLGKFKGEKSVQGLIVRNSIFNGTSNGVRIKTWPSPGE 876
Query: 932 VLTVSKIHYENIKMEDSANPIFIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEA 1111
VS ++N++M D +PI ID +YCPN C+ SK+ ++DV F+NI GTS+ EA
Sbjct: 877 PNLVSNFLFKNLQMIDVQSPINIDQRYCPNPPCSFQSFSKIQIRDVKFQNIWGTSTAKEA 1056
Query: 1112 VSLLCTAKVPCTGVTMDDVNVEYSGTNNKTMAICTNAKGSTKGCLKELAC 1261
V L C+ VPC V + ++N+ + G + ++C N G G + +C
Sbjct: 1057 VKLQCSKNVPCKNVQLFNINIVHRGRDGPATSVCENVGGWIGGKISPPSC 1206
Score = 144 bits (309), Expect(3) = 6e-045
Identities = 83/222 (37%), Positives = 114/222 (51%)
Frame = -3 / -2
Query: 1239 PLVLPLAFVHIAMVLLLVPLYSTLTSSMVTPVHGTLAVQSRLTASGVEEVPVMFLKVTSL 1060
P + P F H + +P + L T + GT + TAS +VP MF TSL
Sbjct: 1184 PPIQPPTFSHTEVAGPSLPRCTMLMLKS*TFLQGTFLLHCNFTASLAVDVPQMFWNFTSL 1005
Query: 1059 TVTLEAPLAVHNLLGQYFMSMKMGLAESSILIFS*WILETVSTEAASSYALMRTPNIVFL 880
E +H GQY SM +GL S I F ET + L+RTP +V L
Sbjct: 1004 I*IFEKD*KLHGGFGQYR*SMLIGLWTSIIWRFLKRKFETKFGSPGEGHVLIRTPLLVPL 825
Query: 879 RVQSLTLMSVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMV 700
+++ LT+ T FS L PRLP L+PWPGPQ+T ++ L+VP + MQSSP M+ +
Sbjct: 824 KIEFLTINP*TLFSPLNFPRLPTLIPWPGPQLTLLISKLKVPDKIAMQSSPVAMSTWWIF 645
Query: 699 IPDESPMWMPSVLGLSPGAVTVTSLISMSLHRYMFMWKNLEL 574
+ + P+ +PSVLGLSPGA+ +T +IS W L L
Sbjct: 644 MWFDEPILIPSVLGLSPGALMLTRVISKCWTEKKLRWPILLL 519
Score = 80.8 bits (170), Expect(2) = 3e-090
Identities = 33/76 (43%), Positives = 44/76 (57%)
Frame = +2 / +1
Query: 155 FDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGPCKGDVTI 334
FD+ GA G+GKTD+T A +AW AC G + IP G F +G + FTGPCK ++
Sbjct: 103 FDVRSYGARGDGKTDNTMAFTKAWKDACQWKGLPRVYIPFGTFYLGAVAFTGPCKSRISF 282
Query: 335 QVDGNLLATTDLSQYK 382
+ G LLA D + K
Sbjct: 283 IIKGTLLAPKDPNAIK 330
Score = 51.0 bits (105), Expect(3) = 6e-045
Identities = 30/73 (41%), Positives = 37/73 (50%)
Frame = -3 / -2
Query: 372 LRSVVASRLPSTWMVTSPLQGPVKLSCPTRKSPLGMRIVCFPVPPHADAHASCTAFVLSV 193
L S A+++P + L GPVK + P K P G+ + P A HA A VLSV
Sbjct: 320 LGSFGANKVPLMMKLIRLLHGPVKATAPR*KVPNGIYTLGNPFHWQASFHAFVNAIVLSV 141
Query: 192 LPLPEAPNLVMSK 154
LP P AP L SK
Sbjct: 140 LPSPRAP*LRTSK 102
Score = 27.6 bits (54), Expect(3) = 6e-045
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -3 / -2
Query: 459 PCPSRFPLPVMTRLSTRRISIQL 391
PCPSR P P R ST IQL
Sbjct: 404 PCPSRMPPPETVR*STYLKIIQL 336
>ref|NM_128219.1| Arabidopsis thaliana polygalacturonase AT2G26620 mRNA, complete cds
Length = 1209
Score = 305 bits (660), Expect(2) = 1e-089
Identities = 129/264 (48%), Positives = 164/264 (62%)
Frame = +2 / +1
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLL 574
WI ++NL I+G G LDGQG W N C K +C L S+ FVNN + +T L
Sbjct: 331 WINFRYINNLSISGSGTLDGQGKQSWPLNDCHKNPNCPKLAISMGFAFVNNSNIKDITSL 510
Query: 575 NSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGP 754
NSK H N + I VT+TAP DSPNTDGI MG S I I+NT IG GDDCI+I
Sbjct: 511 NSKMGHFNFFFVHHFNITGVTITAPSDSPNTDGIKMGSCSNIQISNTNIGTGDDCIAILS 690
Query: 755 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASV 934
GT+K+NI+ + CGPGHGIS+GSLG+ KDEKDV D+ V+D T G+RIK +E +AS
Sbjct: 691 GTTKLNISNINCGPGHGISVGSLGKNKDEKDVKDLFVRDVIFNGTSDGIRIKTWESSASK 870
Query: 935 LTVSKIHYENIKMEDSANPIFIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAV 1114
+ VS YENI+M D PI ID KYCP+ C S V ++D+ KNI GTS AV
Sbjct: 871 ILVSNFVYENIQMIDVGKPINIDQKYCPHPPCEHERKSHVQIQDLKLKNIYGTSKNKVAV 1050
Query: 1115 SLLCTAKVPCTGVTMDDVNVEYSG 1186
+L C+ PC V + D+N++ +G
Sbjct: 1051 NLQCSKSFPCKNVELIDINIKQNG 1122
Score = 123 bits (264), Expect(2) = 2e-028
Identities = 65/132 (49%), Positives = 85/132 (64%)
Frame = -3 / -2
Query: 1017 GQYFMSMKMGLAESSILIFS*WILETVSTEAASSYALMRTPNIVFLRVQSLTLMSVTSFS 838
GQYF SM +G S I IFS ET EA S L+R P++V L++ SLT S TSFS
Sbjct: 953 GQYF*SMLIGFPTSII*IFSYTKFETRIFEADDSQVLIRIPSLVPLKMTSLTNKSFTSFS 774
Query: 837 SLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVIPDESPMWMPSVLG 658
SL+ P+LP L+P PGPQ+ + +L VP + +QSSP PM VL + + P+ +PSVLG
Sbjct: 773 SLFFPKLPTLIPCPGPQLMLEILSLVVPERIAIQSSPVPMFVLEI*MLLHEPILIPSVLG 594
Query: 657 LSPGAVTVTSLI 622
LS GAV VT ++
Sbjct: 593 LSLGAVIVTPVM 558
Score = 48.7 bits (100), Expect(2) = 1e-089
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +2 / +1
Query: 245 TGKQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATTDLSQYK 382
+G I +PKG F +G + F GPCK + +DG LLA + + K
Sbjct: 184 SGSSKIYVPKGTFYLGGVEFVGPCKNPIEFIIDGTLLAPANPNDIK 321
Score = 25.4 bits (49), Expect(2) = 2e-028
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -3 / -2
Query: 1185 PLYSTLTSSMVTPVHGTLAVQSRLTASGVEEVPVMFLKVTS 1063
P L S T +HG L + + TA+ +VP +F + S
Sbjct: 1121 PFCFMLMSISSTFLHGKLLLHCKFTATLFFDVPYIFFNLRS 999
>emb|BX822574.1|CNS0A73L Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB4ZD01 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1339
Score = 298 bits (646), Expect(2) = 4e-089
Identities = 118/282 (41%), Positives = 173/282 (61%)
Frame = +2 / +3
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLL 574
W+ R+D + G G DG+G A W N+C K ++CK LP S+ DFV N E+ ++ +
Sbjct: 360 WVVFQRMDGFRLNGGGTFDGEGNAAWRVNNCHKTFECKKLPISIRFDFVTNAEIRDISSI 539
Query: 575 NSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGP 754
++K FH+N+ K+M +V + AP +SPNTDGIH+G S G++I N+ I GDDC+S+G
Sbjct: 540 DAKNFHINVIGAKNMTFDNVKIMAPAESPNTDGIHLGRSVGVSIINSRISTGDDCVSVGD 719
Query: 755 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASV 934
G + + V CGPGHGIS+GSLGRY E+DV+ I V +CT ++T G+RIK + AA
Sbjct: 720 GMVNLLVKNVVCGPGHGISVGSLGRYGHEQDVSGIRVINCTPQETDNGLRIKTWPSAACS 899
Query: 935 LTVSKIHYENIKMEDSANPIFIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAV 1114
T S IH+ENI + + +NPI ID +YCP C +S + + D+ F+ I GTS +AV
Sbjct: 900 TTASNIHFENIILRNVSNPILIDQEYCPWNQCYKQKSSSIKLADICFRRIRGTSGKKDAV 1079
Query: 1115 SLLCTAKVPCTGVTMDDVNVEYSGTNNKTMAICTNAKGSTKG 1240
LLC PC V + D+N++ G + + +N + G
Sbjct: 1080 KLLCGKGYPCENVQVGDINIQ*IGADGPATFMWSNVRPKLVG 1205
Score = 144 bits (308), Expect(2) = 7e-035
Identities = 81/203 (39%), Positives = 106/203 (52%)
Frame = -3 / -1
Query: 1239 PLVLPLAFVHIAMVLLLVPLYSTLTSSMVTPVHGTLAVQSRLTASGVEEVPVMFLKVTSL 1060
P L L F H+ + P+Y L S T HG + TAS +VP++ LK S
Sbjct: 1204 PTSLGLTFDHMKVAGPSAPIY*ILMSPT*TFSHGYPLPHNNFTASFFPDVPLILLKHMSA 1025
Query: 1059 TVTLEAPLAVHNLLGQYFMSMKMGLAESSILIFS*WILETVSTEAASSYALMRTPNIVFL 880
++ + H GQY SM++GL +IFS ILE V +AA L+ P V
Sbjct: 1024 SLMDDDFCL*HWFQGQYSWSMRIGLLTFLRMIFSK*ILEAVVEQAAEGQVLILRPLSVSW 845
Query: 879 RVQSLTLMSVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMV 700
VQ +TLM +TS S Y PRLP L+P PGP T + +P P E QSSP + L+M
Sbjct: 844 GVQLMTLMPLTSCSCPYLPRLPTLIPCPGPHTTFLTRRFTIPSPTETQSSPVEILELIME 665
Query: 699 IPDESPMWMPSVLGLSPGAVTVT 631
P P W+PSVLGLS GA+ +T
Sbjct: 664 TPTLLPKWIPSVLGLSAGAMILT 596
Score = 53.8 bits (111), Expect(2) = 4e-089
Identities = 21/55 (38%), Positives = 35/55 (63%)
Frame = +2 / +3
Query: 194 TDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLA 358
+D T+A+ A+ +AC + ++IPKG F +G++ +GPCK V I + G +LA
Sbjct: 165 SDITQALLRAFTTACQSPTPRKVVIPKGQFKLGEIMMSGPCKSPVEITLLGTVLA 329
Score = 27.2 bits (53), Expect(2) = 7e-035
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = -3 / -1
Query: 552 SPLFTKSITSELGRILQSYFLVQEFLLHTAGPCPSRFPLP 433
S TKS +G L S L Q L A P PS+ P P
Sbjct: 517 SAFVTKSNLILMGSFLHSKVL*QLLTLQAALPSPSKVPPP 398
>emb|AJ003135.1|ATAJ3135 Arabidopsis thaliana PGA5 gene, complete CDS
Length = 2556
Score = 215 bits (464), Expect(4) = 5e-089
Identities = 84/170 (49%), Positives = 119/170 (70%)
Frame = +2 / +3
Query: 521 SLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGI 700
S+ DF+ N E+ ++ +++K FH+N+ K+M + ++ + AP DSPNTDGIH+G S GI
Sbjct: 1548 SIRFDFILNSEIRDISSIDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGI 1727
Query: 701 TITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTL 880
I N+ I GDDCIS+G G +++ VTCGPGHGIS+GSLGRY E+DV+ I V +CTL
Sbjct: 1728 KILNSFISTGDDCISVGDGMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTL 1907
Query: 881 KKTMFGVRIKAYEDAASVLTVSKIHYENIKMEDSANPIFIDMKYCPNKLC 1030
++T G+RIK + AA T S IH+E+I ++D +NPI ID +YCP C
Sbjct: 1908 QETDNGLRIKTWPSAACSTTASDIHFEDIILKDVSNPILIDQEYCPWNQC 2057
Score = 127 bits (273), Expect(3) = 9e-036
Identities = 67/151 (44%), Positives = 85/151 (56%)
Frame = -3 / -3
Query: 1032 VHNLLGQYFMSMKMGLAESSILIFS*WILETVSTEAASSYALMRTPNIVFLRVQSLTLMS 853
+H GQY SM++GL S +I S I + V +AA + L+ P V RVQ +TLM
Sbjct: 2059 LHWFQGQYSWSMRIGLLTSLRIISSK*ISDAVVEQAAEGHVLILNPLSVS*RVQLMTLMP 1880
Query: 852 VTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVIPDESPMWM 673
+TS S Y PRLP L+P PGP VT +P P E+QSSP M L ++IP P W+
Sbjct: 1879 LTSCSCPYLPRLPTLIPCPGPHVTFST*RFFIPSPTEIQSSPVEMKELRILIPSLLPKWI 1700
Query: 672 PSVLGLSPGAVTVTSLISMSLHRYMFMWKNL 580
PSVLGLS GA + + M L MWK L
Sbjct: 1699 PSVLGLSSGATILMLFMVMFLAPNTLMWKFL 1607
Score = 68.0 bits (142), Expect(4) = 5e-089
Identities = 26/79 (32%), Positives = 42/79 (53%)
Frame = +2 / +1
Query: 1025 LCTANGASKVTVKDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNVEYSGTNNKTM 1204
+C AS + + +++FKNI GTS +AV LLC+ PC V + D++++Y+G +
Sbjct: 2137 ICDLQKASTIKLVNISFKNIRGTSGNKDAVKLLCSKGYPCQNVEIGDIDIKYNGADGPAT 2316
Query: 1205 AICTNAKGSTKGCLKELAC 1261
C+N G AC
Sbjct: 2317 FHCSNVSPKILGSQSPKAC 2373
Score = 57.9 bits (120), Expect(4) = 5e-089
Identities = 21/64 (32%), Positives = 38/64 (59%)
Frame = +2 / +2
Query: 194 TDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATTDLS 373
TD +A+ +A+ SAC + ++IPKG+F +G++ GPCK + + + G + A +
Sbjct: 1151 TDDMQALLKAFTSACQSSSPSKVVIPKGEFKLGEIEMRGPCKAPIEVTLQGTVKADGNAI 1330
Query: 374 QYKD 385
Q K+
Sbjct: 1331 QGKE 1342
Score = 48.7 bits (100), Expect(4) = 5e-089
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +2 / +2
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILP 517
W+ +D + G G DG+G A W N+C K ++CK LP
Sbjct: 1346 WVVFGNIDGFKLNGGGAFDGEGNAAWRVNNCHKTFECKKLP 1468
Score = 44.1 bits (90), Expect(3) = 9e-036
Identities = 26/73 (35%), Positives = 36/73 (49%)
Frame = -3 / -2
Query: 1260 HASSLRQPLVLPLAFVHIAMVLLLVPLYSTLTSSMVTPVHGTLAVQSRLTASGVEEVPVM 1081
HA L P +L L F + PLY S + T HG +QS TAS +VP+M
Sbjct: 2372 HALGL*DPKILGLTFEQWKVAGPSAPLYLISMSPISTFWHGYPLLQSSFTASLFPDVPLM 2193
Query: 1080 FLKVTSLTVTLEA 1042
FLK+ + ++A
Sbjct: 2192 FLKLMFTNLIVDA 2154
Score = 29.5 bits (58), Expect(3) = 9e-036
Identities = 24/95 (25%), Positives = 35/95 (36%)
Frame = -3 / -1
Query: 477 LLHTAGPCPSRFPLPVMTRLSTRRISIQLPWSLYWLRSVVASRLPSTWMVTSPLQGPVKL 298
LL PS P L + +S W+ A +P L GP+
Sbjct: 1434 LLTLQAALPSPSKAPPPFNLKPSMLPKTTHFSFPWIALPSALTVP*RVTSMGALHGPLIS 1255
Query: 297 SCPTRKSPLGMRIVCFPVPPHADAHASCTAFVLSV 193
P+ SP G+ + HAD +A +A + SV
Sbjct: 1254 ISPSLNSPFGITTLLGDEDWHADVNAFRSACISSV 1150
>gb|AC013483.7|ATAC013483 Arabidopsis thaliana chromosome III BAC F17A17 genomic sequence,
complete sequence
Length = 121054
Score = 215 bits (464), Expect(5) = 1e-080
Identities = 86/174 (49%), Positives = 117/174 (67%)
Frame = +2 / -1
Query: 509 ILPNSLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGD 688
+L S+ DFV N E+ ++ +++K FH+N+ K+M +V V AP +SPNTDGIH+G
Sbjct: 53923 LLLQSIRFDFVENAEIRDISSIDAKNFHINVLGAKNMTFDNVKVIAPAESPNTDGIHLGR 53744
Query: 689 SSGITITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVK 868
S G+ I N+ I GDDCIS+G G +++ V CGPGHGIS+GSLGRY E+DVT I V
Sbjct: 53743 SEGVKILNSKIATGDDCISVGDGMKNLHVENVMCGPGHGISVGSLGRYVHEQDVTGITVV 53564
Query: 869 DCTLKKTMFGVRIKAYEDAASVLTVSKIHYENIKMEDSANPIFIDMKYCPNKLC 1030
+CTL+ T G+RIK + AA T S IH+ENI + + +NPI ID +YCP C
Sbjct: 53563 NCTLQGTDNGLRIKTWPSAACATTASGIHFENIILNNVSNPILIDQEYCPWNQC 53402
Score = 215 bits (463), Expect(4) = 6e-089
Identities = 83/170 (48%), Positives = 119/170 (70%)
Frame = +2 / -3
Query: 521 SLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGI 700
S+ DF+ N E+ ++ +++K FH+N+ K+M + ++ + AP DSPNTDGIH+G S G+
Sbjct: 48470 SIRFDFILNSEIRDISSIDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGV 48291
Query: 701 TITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTL 880
I N+ I GDDCIS+G G +++ VTCGPGHGIS+GSLGRY E+DV+ I V +CTL
Sbjct: 48290 KILNSFISTGDDCISVGDGMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTL 48111
Query: 881 KKTMFGVRIKAYEDAASVLTVSKIHYENIKMEDSANPIFIDMKYCPNKLC 1030
++T G+RIK + AA T S IH+E+I ++D +NPI ID +YCP C
Sbjct: 48110 QETDNGLRIKTWPSAACSTTASDIHFEDIILKDVSNPILIDQEYCPWNQC 47961
Score = 209 bits (451), Expect(4) = 1e-075
Identities = 82/170 (48%), Positives = 116/170 (68%)
Frame = +2 / -3
Query: 521 SLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGI 700
S+ DFV N E+ ++ +++K FH+N+ K+M +V + AP +SPNTDGIH+G S G+
Sbjct: 51380 SIRFDFVTNAEIRDISSIDAKNFHINVIGAKNMTFDNVKIMAPAESPNTDGIHLGRSVGV 51201
Query: 701 TITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTL 880
+I N+ I GDDC+S+G G + + V CGPGHGIS+GSLGRY E+DV+ I V +CTL
Sbjct: 51200 SIINSRISTGDDCVSVGDGMVNLLVKNVVCGPGHGISVGSLGRYGHEQDVSGIRVINCTL 51021
Query: 881 KKTMFGVRIKAYEDAASVLTVSKIHYENIKMEDSANPIFIDMKYCPNKLC 1030
++T G+RIK + AA T S IH+ENI + + +NPI ID +YCP C
Sbjct: 51020 QETDNGLRIKTWPSAACSTTASNIHFENIILRNVSNPILIDQEYCPWNQC 50871
Score = 162 bits (348), Expect(4) = 3e-064
Identities = 61/126 (48%), Positives = 86/126 (68%)
Frame = +2 / -2
Query: 539 VNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTV 718
+ N +++ +T NSK FHMN+ CK++ + D+ + AP +S NTDGIH+G S+G+ +
Sbjct: 57696 LTNSKINSITSTNSKLFHMNILNCKNITLSDIGIDAPPESLNTDGIHIGRSNGVNLIGAK 57517
Query: 719 IGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFG 898
I GDDC+SIG GT + + V CGPGHGISIGSLGRY +E+ V + V+ C +K T G
Sbjct: 57516 IKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNG 57337
Query: 899 VRIKAY 916
VRIK +
Sbjct: 57336 VRIKTW 57319
Score = 133 bits (285), Expect(3) = 5e-033
Identities = 68/151 (45%), Positives = 88/151 (58%)
Frame = -3 / +3
Query: 1032 VHNLLGQYFMSMKMGLAESSILIFS*WILETVSTEAASSYALMRTPNIVFLRVQSLTLMS 853
+H GQY SM++GL ++FS I E V +AA + L+ +P V RVQ T+M
Sbjct: 53400 LHWFQGQYSWSMRIGLLTLLRMMFSK*IPEAVVAQAADGHVLILSPLSVP*RVQFTTVMP 53579
Query: 852 VTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVIPDESPMWM 673
VTS S Y PRLP L+P PGP +T + +P P EMQSSP + L ++ P P W+
Sbjct: 53580 VTSCSCTYLPRLPTLIPCPGPHITFSTWRFFIPSPTEMQSSPVAILELRILTPSLLPKWI 53759
Query: 672 PSVLGLSPGAVTVTSLISMSLHRYMFMWKNL 580
PSVLGLS GA+T+T M L FMWK L
Sbjct: 53760 PSVLGLSAGAMTLTLSKVMFLAPRTFMWKFL 53852
Score = 125 bits (268), Expect(2) = 2e-034
Identities = 66/151 (43%), Positives = 84/151 (55%)
Frame = -3 / +1
Query: 1032 VHNLLGQYFMSMKMGLAESSILIFS*WILETVSTEAASSYALMRTPNIVFLRVQSLTLMS 853
+H GQY SM++GL S +I S I + V +AA + L+ P V RVQ +TLM
Sbjct: 47959 LHWFQGQYSWSMRIGLLTSLRIISSK*ISDAVVEQAAEGHVLILNPLSVS*RVQLMTLMP 48138
Query: 852 VTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVIPDESPMWM 673
+TS S Y PRLP L+P PGP VT +P P E+QSSP M L ++ P P W+
Sbjct: 48139 LTSCSCPYLPRLPTLIPCPGPHVTFST*RFFIPSPTEIQSSPVEMKELRILTPSLLPKWI 48318
Query: 672 PSVLGLSPGAVTVTSLISMSLHRYMFMWKNL 580
PSVLGLS GA + + M L MWK L
Sbjct: 48319 PSVLGLSSGATILMLFMVMFLAPNTLMWKFL 48411
Score = 125 bits (267), Expect(2) = 1e-027
Identities = 62/134 (46%), Positives = 78/134 (58%)
Frame = -3 / +1
Query: 1032 VHNLLGQYFMSMKMGLAESSILIFS*WILETVSTEAASSYALMRTPNIVFLRVQSLTLMS 853
+H GQY SM++GL +IFS ILE V +AA L+ P V RVQ +TLM
Sbjct: 50869 LHWFQGQYSWSMRIGLLTFLRMIFSK*ILEAVVEQAAEGQVLILRPLSVSWRVQLMTLMP 51048
Query: 852 VTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVIPDESPMWM 673
+TS S Y PRLP L+P PGP T + +P P E QSSP + L+M P P W+
Sbjct: 51049 LTSCSCPYLPRLPTLIPCPGPHTTFLTRRFTIPSPTETQSSPVEILELIMETPTLLPKWI 51228
Query: 672 PSVLGLSPGAVTVT 631
PSVLGLS GA+ +T
Sbjct: 51229 PSVLGLSAGAMILT 51270
Score = 104 bits (222), Expect(2) = 2e-022
Identities = 53/112 (47%), Positives = 62/112 (55%)
Frame = -3 / +2
Query: 915 YALMRTPNIVFLRVQSLTLMSVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQ 736
+ LMRTP VFL LT+ T S Y PRLPM +P PGP T VP PME Q
Sbjct: 57320 HVLMRTPLSVFLMRHFLTVTPFTGCSLGYLPRLPMEIPCPGPHSTFSTMRFSVPSPMETQ 57499
Query: 735 SSPTPMTVLVMVIPDESPMWMPSVLGLSPGAVTVTSLISMSLHRYMFMWKNL 580
SSP + + + P + PMW+PSVL LS GA S M L MFMWK+L
Sbjct: 57500 SSPVLIFAPIKLTPLDLPMWIPSVLRLSGGASIPISERVMFLQLRMFMWKSL 57655
Score = 73.5 bits (154), Expect(4) = 3e-064
Identities = 29/72 (40%), Positives = 43/72 (59%)
Frame = +2 / -1
Query: 1046 SKVTVKDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNVEYSGTNNKTMAICTNAK 1225
S+V + DVT K I GTS+T AV L+C+ VPCT + + D+N+ ++G ++ C+N K
Sbjct: 57085 SQVKLSDVTIKGIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIK 56906
Query: 1226 GSTKGCLKELAC 1261
G L AC
Sbjct: 56905 PILSGKLVPAAC 56870
Score = 68.0 bits (142), Expect(4) = 6e-089
Identities = 26/79 (32%), Positives = 42/79 (53%)
Frame = +2 / -1
Query: 1025 LCTANGASKVTVKDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNVEYSGTNNKTM 1204
+C AS + + +++FKNI GTS +AV LLC+ PC V + D++++Y+G +
Sbjct: 47881 ICDLQKASTIKLVNISFKNIRGTSGNKDAVKLLCSKGYPCQNVEIGDIDIKYNGADGPAT 47702
Query: 1205 AICTNAKGSTKGCLKELAC 1261
C+N G AC
Sbjct: 47701 FHCSNVSPKILGSQSPKAC 47645
Score = 67.0 bits (140), Expect(5) = 1e-080
Identities = 26/72 (36%), Positives = 39/72 (54%)
Frame = +2 / -3
Query: 1046 SKVTVKDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNVEYSGTNNKTMAICTNAK 1225
S + + D++FKNI GTS +AV LLC+ PC V + ++N+EY G + +C+N
Sbjct: 53183 STIKLVDISFKNIRGTSGNKDAVKLLCSKAHPCANVEIGNINLEYKGADGPPTFMCSNVS 53004
Query: 1226 GSTKGCLKELAC 1261
G AC
Sbjct: 53003 PKLVGTQNPKAC 52968
Score = 67.0 bits (140), Expect(4) = 3e-064
Identities = 23/60 (38%), Positives = 36/60 (60%)
Frame = +2 / -3
Query: 257 TILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATTDLSQYKDHGNWIEILRVDNLVITG 436
TI +PKG+++V L F GPCKG VT++++GN A + K H WI+ + + + G
Sbjct: 58070 TITVPKGEYMVESLEFKGPCKGPVTLELNGNFKAPATVKTTKPHAGWIDFENIADFTLNG 57891
Score = 64.3 bits (134), Expect(5) = 2e-033
Identities = 27/70 (38%), Positives = 41/70 (58%)
Frame = +2 / +3
Query: 1046 SKVTVKDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNVEYSGTNNKTMAICTNAK 1225
S V V +V +KNI GTSS P AV +C+ +PC G++M +V + + + A C+N K
Sbjct: 94182 SAVQVSNVLYKNIQGTSSRPIAVKFVCSKNIPCRGISMQNVKLVDQTQQDVSKASCSNVK 94361
Query: 1226 GSTKGCLKEL 1255
T+G + L
Sbjct: 94362 LDTRGNVSPL 94391
Score = 64.3 bits (134), Expect(4) = 1e-075
Identities = 23/73 (31%), Positives = 41/73 (56%)
Frame = +2 / -3
Query: 1043 ASKVTVKDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNVEYSGTNNKTMAICTNA 1222
+S + + +++F+ I GTS +AV LLC+ PC V + D+N++Y+G + +C+N
Sbjct: 50735 SSSIKLANISFRRIRGTSGNKDAVKLLCSKGYPCENVQVGDINIQYTGADGPATFMCSNV 50556
Query: 1223 KGSTKGCLKELAC 1261
+ G AC
Sbjct: 50555 RPKLVGTQFPKAC 50517
Score = 62.9 bits (131), Expect(5) = 2e-033
Identities = 24/63 (38%), Positives = 39/63 (61%)
Frame = +2 / +3
Query: 542 NNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVI 721
NN VS + L N++ H+ CK++ ++ VT+P DSPNTDGIH+ + I I ++++
Sbjct: 93015 NNLRVSNIRLENAQQMHLTFQDCKNVKALNLMVTSPADSPNTDGIHVSGTQNILIQDSIV 93194
Query: 722 GVG 730
G
Sbjct: 93195 RTG 93203
Score = 57.9 bits (120), Expect(4) = 6e-089
Identities = 21/64 (32%), Positives = 38/64 (59%)
Frame = +2 / -2
Query: 194 TDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATTDLS 373
TD +A+ +A+ SAC + ++IPKG+F +G++ GPCK + + + G + A +
Sbjct: 48867 TDDMQALLKAFTSACQSSSPSKVVIPKGEFKLGEIEMRGPCKAPIEVTLQGTVKADGNAI 48688
Query: 374 QYKD 385
Q K+
Sbjct: 48687 QGKE 48676
Score = 53.8 bits (111), Expect(5) = 1e-080
Identities = 23/62 (37%), Positives = 35/62 (56%)
Frame = +2 / -3
Query: 200 STKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATTDLSQY 379
S +A+ +A+ SAC ++I KG+F +G++ TGPCK V I + G L A Q
Sbjct: 54323 SLQALLKAFTSACQAPTASKVVITKGEFKLGEIEMTGPCKAPVEINLQGTLKADGKAIQG 54144
Query: 380 KD 385
K+
Sbjct: 54143 KE 54138
Score = 53.3 bits (110), Expect(5) = 2e-033
Identities = 19/27 (70%), Positives = 21/27 (77%)
Frame = +2 / +1
Query: 728 GDDCISIGPGTSKVNITGVTCGPGHGI 808
GDDCISI G+ V TG+TCGPGHGI
Sbjct: 93343 GDDCISIVSGSENVRATGITCGPGHGI 93423
Score = 51.9 bits (107), Expect(5) = 1e-080
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +2 / -3
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILP 517
W+ LR++ + G G DG+G A W N+C K ++CK LP
Sbjct: 54134 WVVFLRINGFKLNGGGIFDGEGNAAWRVNNCHKTFECKKLP 54012
Score = 51.5 bits (106), Expect(4) = 1e-075
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +2 / -2
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILP 517
W+ R+D + G G DG+G A W N+C K ++CK LP
Sbjct: 51594 WVVFQRMDGFRLNGGGTFDGEGNAAWRVNNCHKTFECKKLP 51472
Score = 49.2 bits (101), Expect(4) = 1e-075
Identities = 19/51 (37%), Positives = 32/51 (62%)
Frame = +2 / -2
Query: 206 KAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLA 358
+A+ A+ +AC + ++IPKG F +G++ +GPCK V I + G +LA
Sbjct: 51777 QALLRAFTTACQSPTPRKVVIPKGQFKLGEIMMSGPCKSPVEITLLGTVLA 51625
Score = 48.7 bits (100), Expect(4) = 6e-089
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +2 / -2
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILP 517
W+ +D + G G DG+G A W N+C K ++CK LP
Sbjct: 48672 WVVFGNIDGFKLNGGGAFDGEGNAAWRVNNCHKTFECKKLP 48550
Score = 44.1 bits (90), Expect(2) = 2e-034
Identities = 26/73 (35%), Positives = 36/73 (49%)
Frame = -3 / +3
Query: 1260 HASSLRQPLVLPLAFVHIAMVLLLVPLYSTLTSSMVTPVHGTLAVQSRLTASGVEEVPVM 1081
HA L P +L L F + PLY S + T HG +QS TAS +VP+M
Sbjct: 47646 HALGL*DPKILGLTFEQWKVAGPSAPLYLISMSPISTFWHGYPLLQSSFTASLFPDVPLM 47825
Query: 1080 FLKVTSLTVTLEA 1042
FLK+ + ++A
Sbjct: 47826 FLKLMFTNLIVDA 47864
Score = 41.8 bits (85), Expect(5) = 2e-033
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +2 / +3
Query: 344 GNLLATTDLSQYKDHGNWIEILRVDNLVITGKGNLDGQGPAVWSKN 481
G + A + S YK+ +WI V+NL + G G +DG G W K+
Sbjct: 92607 GRIEAWENPSDYKERRHWIVFENVNNLRVEGGGRIDGNGHIWWPKS 92744
Score = 40.0 bits (81), Expect(3) = 5e-033
Identities = 21/65 (32%), Positives = 34/65 (52%)
Frame = -3 / +1
Query: 1239 PLVLPLAFVHIAMVLLLVPLYSTLTSSMVTPVHGTLAVQSRLTASGVEEVPVMFLKVTSL 1060
P L F H+ + PLYS L + T HG + + TAS +VP++FLK+ S
Sbjct: 52990 PTSLGETFEHMKVGGPSAPLYSRLMFPISTFAHGCALLHNSFTASLFPDVPLIFLKLMST 53169
Query: 1059 TVTLE 1045
++ ++
Sbjct: 53170 SLIVD 53184
Score = 35.4 bits (71), Expect(2) = 2e-022
Identities = 23/71 (32%), Positives = 33/71 (46%)
Frame = -3 / +3
Query: 1257 ASSLRQPLVLPLAFVHIAMVLLLVPLYSTLTSSMVTPVHGTLAVQSRLTASGVEEVPVMF 1078
A+ PL + L H +PL++ L S V GT + TA+ V +VP+M
Sbjct: 56874 AAGTNFPLRIGLMLEHAETAGPSLPLWTKLMSERAILVQGTPLLHISFTATFVADVPLMP 57053
Query: 1077 LKVTSLTVTLE 1045
L VTS T +
Sbjct: 57054 LIVTSDNFTCD 57086
Score = 34.1 bits (68), Expect(5) = 2e-033
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = +2 / +3
Query: 809 SIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYE 919
SIGSLG E V+++ V TL T GVRIK ++
Sbjct: 93756 SIGSLGEDNSEAYVSNVVVNKATLIGTTNGVRIKTWQ 93866
Score = 33.1 bits (66), Expect(4) = 3e-064
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2 / -3
Query: 437 KGNLDGQGPAVWSKNSCTKKYDCKILP 517
K DGQG W N C K C LP
Sbjct: 57887 KAIFDGQGSLAWKANDCAKTGKCNSLP 57807
Score = 32.7 bits (65), Expect(2) = 1e-027
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = -3 / +1
Query: 1239 PLVLPLAFVHIAMVLLLVPLYSTLTSSMVTPVHGTLAVQSRLTASGVEEVPVMFLKV 1069
P L L F H+ + P+Y L S T HG + + TAS +VP++ LK+
Sbjct: 50539 PTSLGLTFEHMKVAGPSAPVY*ILMSPT*TFSHGYPLLHNSFTASLFPDVPLILLKL 50709
Score = 29.9 bits (59), Expect(3) = 5e-033
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = -3 / +1
Query: 357 ASRLPSTWMVTSPLQGPVKLSCPTRKSPLGMRIV 256
A +LP VT PL GP+ T SP G IV
Sbjct: 57970 ALKLPFNSKVTGPLHGPLNSRLSTIYSPFGTVIV 58071
Score = 29.5 bits (58), Expect(5) = 1e-080
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +2 / -1
Query: 98 GEKEESKGIDAKASGPGGSFDITKLGASGNGKTDST 205
G S G + PG + D+ GA G+ KTD +
Sbjct: 58318 GGAAASVGAKVSGAKPGAAVDVKASGAKGDSKTDDS 58211
>ref|NM_103464.1| Arabidopsis thaliana polygalacturonase AT1G43090 mRNA, complete cds
Length = 1335
Score = 258 bits (558), Expect(3) = 2e-085
Identities = 109/212 (51%), Positives = 134/212 (63%)
Frame = +2 / +1
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLL 574
WI ++NL I+G G LDGQG W N C K +C L ++ FVNN + +T L
Sbjct: 331 WINFRYINNLSISGSGTLDGQGKYSWPLNDCHKNTNCPKLAMTMGFAFVNNSRIKDITSL 510
Query: 575 NSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGP 754
NSK H N + I VT+TAPGDSPNTDGI MG S I I+NT IG GDDCI+I
Sbjct: 511 NSKMGHFNFFSVHRFNITGVTITAPGDSPNTDGIKMGSCSNIHISNTNIGTGDDCIAILS 690
Query: 755 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASV 934
GT+ ++I+ V CGPGHGIS+GSLG+ KDEKDV + V+D T G+RIK +E +AS
Sbjct: 691 GTTNLDISNVKCGPGHGISVGSLGKNKDEKDVKHLTVRDTVFNGTSDGIRIKTWESSASK 870
Query: 935 LTVSKIHYENIKMEDSANPIFIDMKYCPNKLC 1030
L VS YENI+M D PI ID KYCP+ C
Sbjct: 871 LVVSNFIYENIQMIDVGKPINIDQKYCPHPPC 966
Score = 133 bits (285), Expect(2) = 5e-033
Identities = 67/132 (50%), Positives = 85/132 (64%)
Frame = -3 / -2
Query: 1017 GQYFMSMKMGLAESSILIFS*WILETVSTEAASSYALMRTPNIVFLRVQSLTLMSVTSFS 838
GQYF SM +G S I IFS LET S EA S L+R P++V L+ SLT+ TSFS
Sbjct: 953 GQYF*SMLIGFPTSII*IFSYMKLETTSFEAEDSQVLIRIPSLVPLKTVSLTVKCFTSFS 774
Query: 837 SLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVIPDESPMWMPSVLG 658
SL+ P+LP L+P PGP +T + L VP M +QSSP PM V M + + P+ +PSV G
Sbjct: 773 SLFFPKLPTLIPCPGPHLTLEISRLVVPERMAIQSSPVPMFVFEM*MLLQEPILIPSVFG 594
Query: 657 LSPGAVTVTSLI 622
LSPGAV VT ++
Sbjct: 593 LSPGAVIVTPVM 558
Score = 52.8 bits (109), Expect(3) = 2e-085
Identities = 20/49 (40%), Positives = 32/49 (65%)
Frame = +2 / +1
Query: 1040 GASKVTVKDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNVEYSG 1186
G S V ++D+ KNI GTS+ AV+L C+ PC V + D+N++++G
Sbjct: 982 GKSHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCKNVELIDINLKHTG 1128
Score = 48.3 bits (99), Expect(3) = 2e-085
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +2 / +1
Query: 245 TGKQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLA 358
+G I +PKG F +G + F GPCK + +DG LLA
Sbjct: 184 SGSSKIYVPKGTFYLGGVEFVGPCKNPIEFVIDGTLLA 297
Score = 31.3 bits (62), Expect(2) = 5e-033
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = -3 / -2
Query: 1185 PLYSTLTSSMVTPVHGTLAVQSRLTASGVEEVPVMFLKVTSLTVTLEAP 1039
P+ L S T +HG L + R TA+ + +VP MF + S T + P
Sbjct: 1127 PVCFRLISISSTFLHGKLLLHCRFTATMLFDVPYMFFNLMSWI*T*DLP 981
>gb|DQ056483.1| Arabidopsis thaliana glycoside hydrolase family 28 protein
(At1g43080) mRNA, complete cds
Length = 1215
Score = 257 bits (555), Expect(3) = 4e-085
Identities = 107/212 (50%), Positives = 134/212 (63%)
Frame = +2 / +1
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLL 574
WI ++NL I+G G LDGQG W N C K +C L ++ FVNN + +T L
Sbjct: 331 WINFRYINNLSISGSGTLDGQGKYSWPLNDCHKNTNCPKLAMTMGFAFVNNSRIKDITSL 510
Query: 575 NSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGP 754
NSK H N + I VT+TAPGDSPNTDGI MG S I I+NT IG GDDCI+I
Sbjct: 511 NSKMGHFNFFSVHRFNITGVTITAPGDSPNTDGIKMGSCSNIHISNTNIGTGDDCIAILS 690
Query: 755 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASV 934
GT+ ++I+ + CGPGHGIS+GSLG+ KDEKDV + V+D T G+RIK +E +AS
Sbjct: 691 GTTNLDISNIKCGPGHGISVGSLGKNKDEKDVKHLTVRDTVFNGTSDGIRIKTWESSASK 870
Query: 935 LTVSKIHYENIKMEDSANPIFIDMKYCPNKLC 1030
+ VS YENI+M D PI ID KYCP+ C
Sbjct: 871 IVVSNFIYENIQMIDVGKPINIDQKYCPHPPC 966
Score = 127 bits (273), Expect(2) = 1e-031
Identities = 65/132 (49%), Positives = 83/132 (62%)
Frame = -3 / -2
Query: 1017 GQYFMSMKMGLAESSILIFS*WILETVSTEAASSYALMRTPNIVFLRVQSLTLMSVTSFS 838
GQYF SM +G S I IFS LET EA S L+R P++V L+ SLT+ TSFS
Sbjct: 953 GQYF*SMLIGFPTSII*IFSYMKLETTIFEAEDSQVLIRIPSLVPLKTVSLTVKCFTSFS 774
Query: 837 SLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVIPDESPMWMPSVLG 658
SL+ P+LP L+P PGP + + L VP M +QSSP PM V M + + P+ +PSV G
Sbjct: 773 SLFFPKLPTLIPCPGPHLMLEISRLVVPERMAIQSSPVPMFVFEM*MLLQEPILIPSVFG 594
Query: 657 LSPGAVTVTSLI 622
LSPGAV VT ++
Sbjct: 593 LSPGAVIVTPVM 558
Score = 52.8 bits (109), Expect(3) = 4e-085
Identities = 20/49 (40%), Positives = 32/49 (65%)
Frame = +2 / +1
Query: 1040 GASKVTVKDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNVEYSG 1186
G S V ++D+ KNI GTS+ AV+L C+ PC V + D+N++++G
Sbjct: 982 GESHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCKNVELIDINLKHTG 1128
Score = 48.3 bits (99), Expect(3) = 4e-085
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +2 / +1
Query: 245 TGKQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLA 358
+G I +PKG F +G + F GPCK + +DG LLA
Sbjct: 184 SGSSKIYVPKGTFYLGGVEFVGPCKNPIEFVIDGTLLA 297
Score = 32.2 bits (64), Expect(2) = 1e-031
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = -3 / -2
Query: 1185 PLYSTLTSSMVTPVHGTLAVQSRLTASGVEEVPVMFLKVTSLTVTLEAP 1039
P+ L S T +HG L + R TA+ + +VP MF + S T ++P
Sbjct: 1127 PVCFRLISISSTFLHGKLLLHCRFTATMLFDVPYMFFNLMSWI*T*DSP 981
>ref|NM_103463.1| Arabidopsis thaliana polygalacturonase AT1G43080 mRNA, complete cds
Length = 1215
Score = 257 bits (555), Expect(3) = 4e-085
Identities = 107/212 (50%), Positives = 134/212 (63%)
Frame = +2 / +1
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLL 574
WI ++NL I+G G LDGQG W N C K +C L ++ FVNN + +T L
Sbjct: 331 WINFRYINNLSISGSGTLDGQGKYSWPLNDCHKNTNCPKLAMTMGFAFVNNSRIKDITSL 510
Query: 575 NSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGP 754
NSK H N + I VT+TAPGDSPNTDGI MG S I I+NT IG GDDCI+I
Sbjct: 511 NSKMGHFNFFSVHRFNITGVTITAPGDSPNTDGIKMGSCSNIHISNTNIGTGDDCIAILS 690
Query: 755 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASV 934
GT+ ++I+ + CGPGHGIS+GSLG+ KDEKDV + V+D T G+RIK +E +AS
Sbjct: 691 GTTNLDISNIKCGPGHGISVGSLGKNKDEKDVKHLTVRDTVFNGTSDGIRIKTWESSASK 870
Query: 935 LTVSKIHYENIKMEDSANPIFIDMKYCPNKLC 1030
+ VS YENI+M D PI ID KYCP+ C
Sbjct: 871 IVVSNFIYENIQMIDVGKPINIDQKYCPHPPC 966
Score = 127 bits (273), Expect(2) = 1e-031
Identities = 65/132 (49%), Positives = 83/132 (62%)
Frame = -3 / -2
Query: 1017 GQYFMSMKMGLAESSILIFS*WILETVSTEAASSYALMRTPNIVFLRVQSLTLMSVTSFS 838
GQYF SM +G S I IFS LET EA S L+R P++V L+ SLT+ TSFS
Sbjct: 953 GQYF*SMLIGFPTSII*IFSYMKLETTIFEAEDSQVLIRIPSLVPLKTVSLTVKCFTSFS 774
Query: 837 SLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVIPDESPMWMPSVLG 658
SL+ P+LP L+P PGP + + L VP M +QSSP PM V M + + P+ +PSV G
Sbjct: 773 SLFFPKLPTLIPCPGPHLMLEISRLVVPERMAIQSSPVPMFVFEM*MLLQEPILIPSVFG 594
Query: 657 LSPGAVTVTSLI 622
LSPGAV VT ++
Sbjct: 593 LSPGAVIVTPVM 558
Score = 52.8 bits (109), Expect(3) = 4e-085
Identities = 20/49 (40%), Positives = 32/49 (65%)
Frame = +2 / +1
Query: 1040 GASKVTVKDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNVEYSG 1186
G S V ++D+ KNI GTS+ AV+L C+ PC V + D+N++++G
Sbjct: 982 GESHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCKNVELIDINLKHTG 1128
Score = 48.3 bits (99), Expect(3) = 4e-085
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +2 / +1
Query: 245 TGKQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLA 358
+G I +PKG F +G + F GPCK + +DG LLA
Sbjct: 184 SGSSKIYVPKGTFYLGGVEFVGPCKNPIEFVIDGTLLA 297
Score = 32.2 bits (64), Expect(2) = 1e-031
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = -3 / -2
Query: 1185 PLYSTLTSSMVTPVHGTLAVQSRLTASGVEEVPVMFLKVTSLTVTLEAP 1039
P+ L S T +HG L + R TA+ + +VP MF + S T ++P
Sbjct: 1127 PVCFRLISISSTFLHGKLLLHCRFTATMLFDVPYMFFNLMSWI*T*DSP 981
>ref|NM_127106.1| Arabidopsis thaliana polygalacturonase AT2G15460 mRNA, complete cds
Length = 1209
Score = 257 bits (556), Expect(3) = 1e-084
Identities = 108/212 (50%), Positives = 134/212 (63%)
Frame = +2 / +1
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLL 574
WI ++NL I+G G LDGQG W N C +C L ++ FVNN + +T L
Sbjct: 331 WINFRYINNLSISGSGTLDGQGKQSWPHNDCHTNPNCPKLAMTMGFAFVNNSNIKDITSL 510
Query: 575 NSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGP 754
NSK H N + I VT+TAPGDSPNTDGI MG S I I++T IG GDDCI+I
Sbjct: 511 NSKMGHFNFFSVHHFNITGVTITAPGDSPNTDGIKMGSCSNIQISDTNIGTGDDCIAILS 690
Query: 755 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASV 934
GT+ +NI+ V CGPGHGIS+GSLG+ KDEKDV D+ V+D T G+RIK +E +AS
Sbjct: 691 GTTNLNISNVNCGPGHGISVGSLGKSKDEKDVKDLIVRDVIFNGTSDGIRIKTWESSASK 870
Query: 935 LTVSKIHYENIKMEDSANPIFIDMKYCPNKLC 1030
+ VS YENI+M D PI ID KYCP+ C
Sbjct: 871 ILVSNFVYENIQMIDVGKPINIDQKYCPHPPC 966
Score = 128 bits (274), Expect(2) = 1e-030
Identities = 66/132 (50%), Positives = 85/132 (64%)
Frame = -3 / -2
Query: 1017 GQYFMSMKMGLAESSILIFS*WILETVSTEAASSYALMRTPNIVFLRVQSLTLMSVTSFS 838
GQYF SM +G S I IFS ET EA S L+R P++V L++ SLT+ S TSFS
Sbjct: 953 GQYF*SMLIGFPTSII*IFSYTKFETRIFEAEDSQVLIRIPSLVPLKMTSLTIKSFTSFS 774
Query: 837 SLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVIPDESPMWMPSVLG 658
SL P+LP L+P PGPQ+T + L VP + +QSSP PM V + + P+ +PSVLG
Sbjct: 773 SLLFPKLPTLIPCPGPQLTLEILRLVVPERIAIQSSPVPMFVSEI*MLLHEPILIPSVLG 594
Query: 657 LSPGAVTVTSLI 622
LSPGAV VT ++
Sbjct: 593 LSPGAVIVTPVM 558
Score = 50.1 bits (103), Expect(3) = 1e-084
Identities = 19/46 (41%), Positives = 26/46 (56%)
Frame = +2 / +1
Query: 245 TGKQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATTDLSQYK 382
+G I +PKG F +G + F GPCK + +DG LLA + S K
Sbjct: 184 SGSSKIYVPKGTFYLGGVEFVGPCKNPIEFIIDGTLLAPANPSDIK 321
Score = 48.7 bits (100), Expect(3) = 1e-084
Identities = 19/52 (36%), Positives = 31/52 (59%)
Frame = +2 / +1
Query: 1040 GASKVTVKDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNVEYSGTNN 1195
G S V ++++ KNI GTS AV+L C+ PC V + D+N++ +G +
Sbjct: 982 GESHVQIQNLKLKNIYGTSKNKVAVNLQCSKIFPCKNVELIDINIKQNGVKD 1137
Score = 28.6 bits (56), Expect(2) = 1e-030
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = -3 / -2
Query: 1191 LVPLYSTLTSSMVTPVHGTLAVQSRLTASGVEEVPVMFLKVTSLTVTLEAP 1039
L P L S T +HG + + R TA+ +VP MF + T ++P
Sbjct: 1133 LTPFCFILMSISSTFLHGKILLHCRFTATLFFDVPYMFFNLRFWI*T*DSP 981
>ref|NM_129589.1| Arabidopsis thaliana polygalacturonase AT2G40310 mRNA, complete cds
Length = 1215
Score = 253 bits (548), Expect(3) = 2e-084
Identities = 106/212 (50%), Positives = 134/212 (63%)
Frame = +2 / +1
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLL 574
WI ++NL I+G G LDGQG W N C K +C L ++ FVNN + +T L
Sbjct: 331 WINFRYINNLSISGSGTLDGQGKQSWPLNDCHKNLNCPKLAMTMGFAFVNNSNIKDITSL 510
Query: 575 NSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGP 754
NSK H N + I VT+TA GDSPNTDGI MG S + I+NT IG GDDCI+I
Sbjct: 511 NSKMGHFNFFSVHHFNITGVTITASGDSPNTDGIKMGSCSNMHISNTNIGTGDDCIAILS 690
Query: 755 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASV 934
GT+ ++I+ V CGPGHGIS+GSLG+ KDEKDV ++ V+D T G+RIK +E +AS
Sbjct: 691 GTTNLDISNVKCGPGHGISVGSLGKNKDEKDVKNLTVRDVIFNGTSDGIRIKTWESSASK 870
Query: 935 LTVSKIHYENIKMEDSANPIFIDMKYCPNKLC 1030
+ VS YENI+M D PI ID KYCP+ C
Sbjct: 871 ILVSNFVYENIQMIDVGKPINIDQKYCPHPPC 966
Score = 129 bits (276), Expect(2) = 4e-030
Identities = 67/132 (50%), Positives = 84/132 (63%)
Frame = -3 / -2
Query: 1017 GQYFMSMKMGLAESSILIFS*WILETVSTEAASSYALMRTPNIVFLRVQSLTLMSVTSFS 838
GQYF SM +G S I IFS ET EA S L+R P++V L++ SLT+ TSFS
Sbjct: 953 GQYF*SMLIGFPTSII*IFSYTKFETRIFEAEDSQVLIRIPSLVPLKMTSLTVKFFTSFS 774
Query: 837 SLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVIPDESPMWMPSVLG 658
SL+ P+LP L+P PGP +T + L VP M +QSSP PM VL M + P+ +PSVLG
Sbjct: 773 SLFFPKLPTLIPCPGPHLTLEISRLVVPERMAIQSSPVPMFVLEMCMLLHEPILIPSVLG 594
Query: 657 LSPGAVTVTSLI 622
LSP AV VT +I
Sbjct: 593 LSPEAVIVTPVI 558
Score = 52.4 bits (108), Expect(3) = 2e-084
Identities = 19/54 (35%), Positives = 32/54 (59%)
Frame = +2 / +1
Query: 1040 GASKVTVKDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNVEYSGTNNKT 1201
G S V ++D+ KNI GTS A++L C+ PC + + D+N++ +G N +
Sbjct: 982 GESHVQIQDLKLKNIYGTSKNKVAMNLQCSKSFPCKNIELIDINIKSNGLENSS 1143
Score = 49.6 bits (102), Expect(3) = 2e-084
Identities = 19/46 (41%), Positives = 26/46 (56%)
Frame = +2 / +1
Query: 245 TGKQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATTDLSQYK 382
+G I +PKG F +G + F GPCK + +DG LLA + S K
Sbjct: 184 SGSSKIYVPKGIFYLGGVEFVGPCKNPIEFVIDGTLLAPANPSDIK 321
Score = 25.8 bits (50), Expect(2) = 4e-030
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -3 / -2
Query: 1185 PLYSTLTSSMVTPVHGTLAVQSRLTASGVEEVPVMFLKVTSLTVTLEAP 1039
PL L S +HG L + R A+ +VP MF + S T ++P
Sbjct: 1127 PLLFMLMSISSIFLHGKLLLH*RFIATLFFDVPYMFFNLRSWI*T*DSP 981
>ref|NM_127105.1| Arabidopsis thaliana polygalacturonase AT2G15450 mRNA, complete cds
Length = 1215
Score = 256 bits (554), Expect(3) = 3e-084
Identities = 108/212 (50%), Positives = 134/212 (63%)
Frame = +2 / +1
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLL 574
WI ++NL I+G G LDGQG W N C +C L ++ FVNN + +T L
Sbjct: 331 WINFRYINNLSISGSGTLDGQGKQSWPHNDCHTNPNCPKLAMTMGFAFVNNSNIKDITSL 510
Query: 575 NSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGP 754
NSK H N + I VT+TAPGDSPNTDGI MG S I I++T IG GDDCI+I
Sbjct: 511 NSKMGHFNFFSVHHFNITGVTITAPGDSPNTDGIKMGSCSNIQISDTNIGTGDDCIAILS 690
Query: 755 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASV 934
GT+ +NI+ V CGPGHGIS+GSLG+ KDEKDV D+ V+D T G+RIK +E +AS
Sbjct: 691 GTTNLNISNVNCGPGHGISVGSLGKNKDEKDVKDLIVRDVIFNGTSDGIRIKNWESSASK 870
Query: 935 LTVSKIHYENIKMEDSANPIFIDMKYCPNKLC 1030
+ VS YENI+M D PI ID KYCP+ C
Sbjct: 871 ILVSNFVYENIQMIDVGKPINIDQKYCPHPPC 966
Score = 129 bits (276), Expect(2) = 6e-031
Identities = 66/132 (50%), Positives = 86/132 (65%)
Frame = -3 / -2
Query: 1017 GQYFMSMKMGLAESSILIFS*WILETVSTEAASSYALMRTPNIVFLRVQSLTLMSVTSFS 838
GQYF SM +G S I IFS ET EA S L+R P++V L++ SLT+ S TSFS
Sbjct: 953 GQYF*SMLIGFPTSII*IFSYTKFETRIFEAEDSQFLIRIPSLVPLKMTSLTIKSFTSFS 774
Query: 837 SLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVIPDESPMWMPSVLG 658
SL+ P+LP L+P PGPQ+T + L VP + +QSSP PM V + + P+ +PSVLG
Sbjct: 773 SLFFPKLPTLIPCPGPQLTLEILRLVVPERIAIQSSPVPMFVSEI*MLLHEPILIPSVLG 594
Query: 657 LSPGAVTVTSLI 622
LSPGAV VT ++
Sbjct: 593 LSPGAVIVTPVM 558
Score = 50.1 bits (103), Expect(3) = 3e-084
Identities = 19/46 (41%), Positives = 26/46 (56%)
Frame = +2 / +1
Query: 245 TGKQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATTDLSQYK 382
+G I +PKG F +G + F GPCK + +DG LLA + S K
Sbjct: 184 SGSSKIYVPKGTFYLGGVEFVGPCKNPIEFIIDGTLLAPANPSDIK 321
Score = 48.7 bits (100), Expect(3) = 3e-084
Identities = 19/52 (36%), Positives = 31/52 (59%)
Frame = +2 / +1
Query: 1040 GASKVTVKDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNVEYSGTNN 1195
G S V ++++ KNI GTS AV+L C+ PC V + D+N++ +G +
Sbjct: 982 GESHVQIQNLKLKNIYGTSKNKVAVNLQCSKIFPCKNVELIDINIKQNGVKD 1137
Score = 28.6 bits (56), Expect(2) = 6e-031
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = -3 / -2
Query: 1191 LVPLYSTLTSSMVTPVHGTLAVQSRLTASGVEEVPVMFLKVTSLTVTLEAP 1039
L P L S T +HG + + R TA+ +VP MF + T ++P
Sbjct: 1133 LTPFCFILMSISSTFLHGKILLHCRFTATLFFDVPYMFFNLRFWI*T*DSP 981
>ref|NM_103465.1| Arabidopsis thaliana polygalacturonase AT1G43100 mRNA, complete cds
Length = 1335
Score = 258 bits (558), Expect(3) = 5e-084
Identities = 109/212 (51%), Positives = 134/212 (63%)
Frame = +2 / +1
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLL 574
WI ++NL I+G G LDGQG W N C K +C L ++ FVNN + +T L
Sbjct: 331 WINFRYINNLSISGSGTLDGQGKYSWPLNDCHKNTNCPELAMTMGFAFVNNSRIKDITSL 510
Query: 575 NSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGP 754
NSK H N + I VT+TAPGDSPNTDGI MG S I I+NT IG GDDCI+I
Sbjct: 511 NSKMGHFNFFSVHRFNITGVTITAPGDSPNTDGIKMGSCSNIHISNTNIGTGDDCIAILS 690
Query: 755 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASV 934
GT+ ++I+ V CGPGHGIS+GSLG+ KDEKDV + V+D T G+RIK +E +AS
Sbjct: 691 GTTNLDISNVKCGPGHGISVGSLGKNKDEKDVKHLTVRDTVFNGTSDGIRIKTWESSASK 870
Query: 935 LTVSKIHYENIKMEDSANPIFIDMKYCPNKLC 1030
L VS YENI+M D PI ID KYCP+ C
Sbjct: 871 LVVSNFIYENIQMIDVGKPINIDQKYCPHPPC 966
Score = 133 bits (285), Expect(2) = 5e-033
Identities = 67/132 (50%), Positives = 85/132 (64%)
Frame = -3 / -2
Query: 1017 GQYFMSMKMGLAESSILIFS*WILETVSTEAASSYALMRTPNIVFLRVQSLTLMSVTSFS 838
GQYF SM +G S I IFS LET S EA S L+R P++V L+ SLT+ TSFS
Sbjct: 953 GQYF*SMLIGFPTSII*IFSYMKLETTSFEAEDSQVLIRIPSLVPLKTVSLTVKCFTSFS 774
Query: 837 SLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVIPDESPMWMPSVLG 658
SL+ P+LP L+P PGP +T + L VP M +QSSP PM V M + + P+ +PSV G
Sbjct: 773 SLFFPKLPTLIPCPGPHLTLEISRLVVPERMAIQSSPVPMFVFEM*MLLQEPILIPSVFG 594
Query: 657 LSPGAVTVTSLI 622
LSPGAV VT ++
Sbjct: 593 LSPGAVIVTPVM 558
Score = 52.8 bits (109), Expect(3) = 5e-084
Identities = 20/49 (40%), Positives = 32/49 (65%)
Frame = +2 / +1
Query: 1040 GASKVTVKDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNVEYSG 1186
G S V ++D+ KNI GTS+ AV+L C+ PC V + D+N++++G
Sbjct: 982 GKSHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCKNVELIDINLKHTG 1128
Score = 43.2 bits (88), Expect(3) = 5e-084
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +2 / +1
Query: 245 TGKQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLA 358
+G I +PKG F +G + F GP K + +DG LLA
Sbjct: 184 SGSSKIYVPKGKFYLGGVEFVGPYKNPIEFVIDGTLLA 297
Score = 31.3 bits (62), Expect(2) = 5e-033
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = -3 / -2
Query: 1185 PLYSTLTSSMVTPVHGTLAVQSRLTASGVEEVPVMFLKVTSLTVTLEAP 1039
P+ L S T +HG L + R TA+ + +VP MF + S T + P
Sbjct: 1127 PVCFRLISISSTFLHGKLLLHCRFTATMLFDVPYMFFNLMSWI*T*DLP 981
>emb|BX819999.1|CNS0AA2M Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS59ZH05 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1532
Score = 252 bits (544), Expect(3) = 7e-084
Identities = 103/216 (47%), Positives = 141/216 (65%)
Frame = +2 / +2
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLL 574
WI VDNL +TG G LDGQG W N C K +C+ L ++ FV + +++G+ +
Sbjct: 356 WILFKYVDNLTVTGGGLLDGQGSYSWPLNDCNKNTNCRTLAMNIGFAFVKSSKINGLRSI 535
Query: 575 NSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGP 754
NSK H N++ +D I VT+T PGDSPNTDGI +G SS + I N IG GDDCI+I
Sbjct: 536 NSKMGHFNLFSVEDFDITGVTITTPGDSPNTDGIKIGKSSHMQIYNVTIGTGDDCIAILD 715
Query: 755 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASV 934
GTS ++I+ V CGPGHGIS+GSLGRYK+EK+V + V++ + T G+RIK + + S
Sbjct: 716 GTSNLDISDVRCGPGHGISVGSLGRYKEEKNVQGLTVRNSIINGTTDGLRIKTWAKSVSQ 895
Query: 935 LTVSKIHYENIKMEDSANPIFIDMKYCPNKLCTANG 1042
++VS YENI+M + NPI ID +YCP+ C + G
Sbjct: 896 ISVSNFLYENIQMINVGNPIVIDQQYCPHGQCDSPG 1003
Score = 137 bits (294), Expect = 9e-031
Identities = 82/215 (38%), Positives = 110/215 (51%)
Frame = -3 / -3
Query: 1029 HNLLGQYFMSMKMGLAESSILIFS*WILETVSTEAASSYALMRTPNIVFLRVQSLTLMSV 850
H GQY SM +G I +FS ET + ++ L+R P++V L ++ LT+
Sbjct: 990 HCPCGQYC*SMTIGFPTLIIWMFSYKKFETEICDTDLAHVLIRKPSVVPLIIEFLTVKPW 811
Query: 849 TSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVIPDESPMWMP 670
T FSSLY PRLP L+P PGP +T + L VP + +QSSP P+ L + I + P+ +P
Sbjct: 810 TFFSSLYLPRLPTLIPCPGPHLTSEISKLLVPSRIAIQSSPVPIVTL*ICIWLDFPILIP 631
Query: 669 SVLGLSPGAVTVTSLISMSLHRYMFMWKNLELSSVTPDTSPLFTKSITSELGRILQSYFL 490
SVLGLSPG V VT ++S S L L + P TK+ + + Q FL
Sbjct: 630 SVLGLSPGVVMVTPVMSKSSTENKLKCPILLLMDLRPLIFDDLTKANPMFIASVRQLVFL 451
Query: 489 VQEFLLHTAGPCPSRFPLPVMTRLSTRRISIQLPW 385
+Q P PS P PV RLST SI W
Sbjct: 450 LQSLRGQE*DP*PSSNPPPVTVRLSTYLKSIHSSW 346
Score = 69.8 bits (146), Expect(3) = 7e-084
Identities = 27/73 (36%), Positives = 42/73 (57%)
Frame = +2 / +2
Query: 1043 ASKVTVKDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNVEYSGTNNKTMAICTNA 1222
AS V +KDV + NI GTS++ EA+ + C+ PC V + ++N+ Y G + A+C N
Sbjct: 1010 ASHVQIKDVKYNNIWGTSTSKEALKMQCSKTFPCQDVELSNINLHYVGRDGLVTALCENV 1189
Query: 1223 KGSTKGCLKELAC 1261
GS +G + C
Sbjct: 1190 GGSIRGKIVPANC 1228
Score = 32.2 bits (64), Expect(3) = 7e-084
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2 / +2
Query: 293 QLNFTGPCKGDVTIQVDGNLLA 358
Q+ F+GPCK +T + G LLA
Sbjct: 257 QVTFSGPCKSSITFFIRGTLLA 322
>ref|NM_117450.1| Arabidopsis thaliana polygalacturonase AT4G13760 mRNA, complete cds
Length = 1128
Score = 256 bits (553), Expect(3) = 7e-084
Identities = 106/212 (50%), Positives = 136/212 (64%)
Frame = +2 / +1
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLL 574
WI+ +++L I+G G LDGQG W N C K +C L ++ FVNN + +T L
Sbjct: 244 WIKFKYINDLSISGSGTLDGQGKQSWPLNDCHKNPNCPKLAMTMGFAFVNNSNIKDITSL 423
Query: 575 NSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGP 754
NSK H N + I VT+TAPG+SPNTDGI MG S I I+NT IG GDDCI+I
Sbjct: 424 NSKMGHFNFFSVHHFNITGVTITAPGNSPNTDGIKMGSCSNIHISNTNIGTGDDCIAILS 603
Query: 755 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASV 934
GT+ ++I+ V CGPGHGIS+GSLG+ KDEKDV D+ ++D T G+RIK +E +AS
Sbjct: 604 GTTNLDISNVNCGPGHGISVGSLGKNKDEKDVKDLTIRDVIFNGTSDGIRIKTWESSASK 783
Query: 935 LTVSKIHYENIKMEDSANPIFIDMKYCPNKLC 1030
+ VS YENI+M D PI ID KYCP+ C
Sbjct: 784 ILVSNFLYENIQMIDVGKPINIDQKYCPHPPC 879
Score = 130 bits (279), Expect(3) = 3e-033
Identities = 67/132 (50%), Positives = 85/132 (64%)
Frame = -3 / -2
Query: 1017 GQYFMSMKMGLAESSILIFS*WILETVSTEAASSYALMRTPNIVFLRVQSLTLMSVTSFS 838
GQYF SM +G S I IFS ET EA S L+R P++V L++ SL + S TSFS
Sbjct: 866 GQYF*SMLIGFPTSII*IFSYKKFETRIFEAEDSQVLIRIPSLVPLKITSLIVKSFTSFS 687
Query: 837 SLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVIPDESPMWMPSVLG 658
SL+ P+LP L+P PGPQ+T + L VP M +QSSP PM VL M + P+ +PSVLG
Sbjct: 686 SLFFPKLPTLIPCPGPQLTLEISRLVVPESMAIQSSPVPMFVLEM*MLLHEPILIPSVLG 507
Query: 657 LSPGAVTVTSLI 622
L PGAV VT ++
Sbjct: 506 LLPGAVIVTPVM 471
Score = 49.2 bits (101), Expect(3) = 7e-084
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +2 / +1
Query: 245 TGKQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATTDLSQYK 382
+G I +PKG F +G + F GPCK + +DG LLA + + K
Sbjct: 97 SGSSKIYVPKGTFYLGGVEFVGPCKNPIEFLIDGTLLAPANPNNIK 234
Score = 48.7 bits (100), Expect(3) = 7e-084
Identities = 18/49 (36%), Positives = 30/49 (61%)
Frame = +2 / +1
Query: 1040 GASKVTVKDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNVEYSG 1186
G S V ++++ KNI GTS AV+L C+ + PC + + D+N+ +G
Sbjct: 895 GESHVQIQNLKLKNIYGTSKNKVAVNLQCSKRFPCKNIELIDINITNNG 1041
Score = 26.7 bits (52), Expect(3) = 3e-033
Identities = 18/54 (33%), Positives = 22/54 (40%)
Frame = -3 / -2
Query: 582 LELSSVTPDTSPLFTKSITSELGRILQSYFLVQEFLLHTAGPCPSRFPLPVMTR 421
L LS V LFT + + + Q FL Q PCPS P P + R
Sbjct: 431 LLLSDVMSLIFELFTNANPIVIANLGQLGFLWQSLSGQDCFPCPSSVPEPEIER 270
Score = 26.3 bits (51), Expect(3) = 3e-033
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = -3 / -2
Query: 1185 PLYSTLTSSMVTPVHGTLAVQSRLTASGVEEVPVMFLKVTSLTVTLEAP 1039
PL+ L S +HG L + R TA+ +VP +F + T ++P
Sbjct: 1040 PLFVMLMSISSIFLHGNLLLH*RFTATLFFDVPYIFFNLRFWI*T*DSP 894
>emb|BX823616.1|CNS0A4Y3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS57ZE12 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1644
Score = 161 bits (347), Expect(5) = 7e-084
Identities = 61/126 (48%), Positives = 86/126 (68%)
Frame = +2 / +2
Query: 539 VNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTV 718
+ N +++ +T NSK FHMN+ CK++ + D+ + AP +S NTDGIH+G S+G+ +
Sbjct: 668 LTNSKINSITSTNSKLFHMNILNCKNITLTDIGIDAPPESLNTDGIHIGRSNGVNLIGAK 847
Query: 719 IGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFG 898
I GDDC+SIG GT + + V CGPGHGISIGSLGRY +E+ V + V+ C +K T G
Sbjct: 848 IKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNG 1027
Query: 899 VRIKAY 916
VRIK +
Sbjct: 1028 VRIKTW 1045
Score = 108 bits (230), Expect(5) = 7e-084
Identities = 44/106 (41%), Positives = 64/106 (60%)
Frame = +2 / +2
Query: 944 SKIHYENIKMEDSANPIFIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAVSLL 1123
S I +E+I M++ + P+ ID +YCP C A SKV + DVT KNI GTS+T AV L+
Sbjct: 1070 SNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSKVKLSDVTIKNIKGTSATKVAVKLM 1249
Query: 1124 CTAKVPCTGVTMDDVNVEYSGTNNKTMAICTNAKGSTKGCLKELAC 1261
C+ VPCT + + D+N+ ++G ++ C+N K G L AC
Sbjct: 1250 CSKGVPCTNIALSDINLVHNGKEGPAVSACSNIKPILSGKLVPAAC 1387
Score = 106 bits (226), Expect(4) = 1e-038
Identities = 53/112 (47%), Positives = 63/112 (56%)
Frame = -3 / -1
Query: 915 YALMRTPNIVFLRVQSLTLMSVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQ 736
+ LMRTP VFL LT+ T S Y PRLPM +P PGP T VP PME Q
Sbjct: 1044 HVLMRTPLSVFLMRHFLTVTPFTGCSLGYLPRLPMEIPCPGPHSTFSTMRFSVPSPMETQ 865
Query: 735 SSPTPMTVLVMVIPDESPMWMPSVLGLSPGAVTVTSLISMSLHRYMFMWKNL 580
SSP + + + P + PMW+PSVL LS GA S+ M L MFMWK+L
Sbjct: 864 SSPVLIFAPIKLTPLDLPMWIPSVLRLSGGASIPISVRVMFLQLRMFMWKSL 709
Score = 57.0 bits (118), Expect(4) = 1e-038
Identities = 37/107 (34%), Positives = 52/107 (48%)
Frame = -3 / -1
Query: 1257 ASSLRQPLVLPLAFVHIAMVLLLVPLYSTLTSSMVTPVHGTLAVQSRLTASGVEEVPVMF 1078
A+ PL + L H +PL++ L S V GT + TA+ V +VP+MF
Sbjct: 1383 AAGTNFPLRIGLMLEHAETAGPSLPLWTKLMSERAILVQGTPLLHISFTATFVADVPLMF 1204
Query: 1077 LKVTSLTVTLEAPLAVHNLLGQYFMSMKMGLAESSILIFS*WILETV 937
L VTS T + A+ GQY SM+ G SI+I S +LE +
Sbjct: 1203 LIVTSDNFTFDGTPALQWP*GQYSWSMRTGRLTLSIVISSKRMLEAI 1063
Score = 52.8 bits (109), Expect(5) = 7e-084
Identities = 19/34 (55%), Positives = 26/34 (76%)
Frame = +2 / +2
Query: 257 TILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLA 358
TI +PKG++LV L F GPCKG VT++++GN A
Sbjct: 386 TITVPKGEYLVESLEFKGPCKGPVTLELNGNFEA 487
Score = 41.4 bits (84), Expect(5) = 7e-084
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +2 / +2
Query: 146 GGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTI 262
G S D+ GA G+GKTD + A AW AC T+
Sbjct: 281 GASLDVKASGAKGDGKTDDSAAFAAAWKEACAAGSTITV 397
Score = 35.0 bits (70), Expect(4) = 1e-038
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = -3 / -1
Query: 357 ASRLPSTWMVTSPLQGPVKLSCPTRKSPLGMRIV 256
AS+LP VT PL GP+ T+ SP G IV
Sbjct: 486 ASKLPFNSKVTGPLHGPLNSRLSTKYSPFGTVIV 385
Score = 32.2 bits (64), Expect(4) = 1e-038
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -3 / -1
Query: 234 ADAHASCTAFVLSVLPLPEAPNLVMSKDPP 145
A HA+ A + SVLP P AP+ + S D P
Sbjct: 369 ASFHAAANAALSSVLPSPLAPDALTSSDAP 280
Score = 26.3 bits (51), Expect(5) = 7e-084
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +2 / +1
Query: 449 DGQGPAVWSKNSCTK 493
DGQG W N C K
Sbjct: 580 DGQGSLAWKANDCAK 624
>ref|NM_127107.2| Arabidopsis thaliana polygalacturonase AT2G15470 mRNA, complete cds
Length = 1215
Score = 255 bits (552), Expect(3) = 3e-082
Identities = 107/212 (50%), Positives = 133/212 (62%)
Frame = +2 / +1
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLL 574
WI ++NL I+G G LDGQG W N C +C L ++ FVNN + +T L
Sbjct: 331 WINFRYINNLSISGSGTLDGQGKQSWPHNDCHTNPNCPKLAMTMGFAFVNNSNIKDITSL 510
Query: 575 NSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGP 754
NSK H N + I VT+TAPGDSPNTDGI MG S I I++T IG GDDCI+I
Sbjct: 511 NSKMGHFNFFSVHHFNITGVTITAPGDSPNTDGIKMGSCSNIQISDTNIGTGDDCIAILS 690
Query: 755 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASV 934
GT+ +NI+ V CGPGHGIS+GSLG+ KDEKD D+ V+D T G+RIK +E +AS
Sbjct: 691 GTTNLNISNVNCGPGHGISVGSLGKNKDEKDAKDLIVRDVIFNGTSDGIRIKTWESSASK 870
Query: 935 LTVSKIHYENIKMEDSANPIFIDMKYCPNKLC 1030
+ VS YENI+M D PI ID KYCP+ C
Sbjct: 871 ILVSNFVYENIQMIDVGKPINIDQKYCPHPPC 966
Score = 127 bits (273), Expect(2) = 1e-029
Identities = 65/132 (49%), Positives = 85/132 (64%)
Frame = -3 / -2
Query: 1017 GQYFMSMKMGLAESSILIFS*WILETVSTEAASSYALMRTPNIVFLRVQSLTLMSVTSFS 838
GQYF SM +G S I IFS ET EA S L+R P++V L++ SLT+ S SFS
Sbjct: 953 GQYF*SMLIGFPTSII*IFSYTKFETRIFEAEDSQVLIRIPSLVPLKMTSLTIKSFASFS 774
Query: 837 SLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVIPDESPMWMPSVLG 658
SL+ P+LP L+P PGPQ+T + L VP + +QSSP PM V + + P+ +PSVLG
Sbjct: 773 SLFFPKLPTLIPCPGPQLTLEILRLVVPERIAIQSSPVPMFVSEI*MLLHEPILIPSVLG 594
Query: 657 LSPGAVTVTSLI 622
LSPGAV VT ++
Sbjct: 593 LSPGAVIVTPVM 558
Score = 47.3 bits (97), Expect(3) = 3e-082
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +2 / +1
Query: 1040 GASKVTVKDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNVEYSGTNN 1195
G S V ++++ KNI GTS A++L C+ PC V + D+N++ +G +
Sbjct: 982 GESHVQIQNLKLKNIYGTSKNKVAMNLQCSKIFPCKNVELIDINIKQNGVKD 1137
Score = 45.5 bits (93), Expect(3) = 3e-082
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +2 / +1
Query: 245 TGKQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATTDLSQYK 382
+G I +PKG F +G + F G CK + +DG LLA + S K
Sbjct: 184 SGSSKIYVPKGTFYLGGVEFVGLCKNPIEFIIDGTLLAPANPSDIK 321
Score = 25.8 bits (50), Expect(2) = 1e-029
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = -3 / -2
Query: 1191 LVPLYSTLTSSMVTPVHGTLAVQSRLTASGVEEVPVMFLKVTSLTVTLEAP 1039
L P L S T +HG + + R A+ +VP MF + T ++P
Sbjct: 1133 LTPFCFILMSISSTFLHGKILLHCRFIATLFFDVPYMFFNLRFWI*T*DSP 981
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 183 bits (395), Expect(5) = 5e-062
Identities = 78/167 (46%), Positives = 105/167 (62%)
Frame = +2 / +2
Query: 533 DFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITN 712
DFV N ++G+T LNSK H N I V + AP +SPNTDGI + SS + I+N
Sbjct: 5866487 DFVKNSSMNGITSLNSKAGHFNFLSVDHFSITRVNIIAPSNSPNTDGIKIALSSNMQISN 5866666
Query: 713 TVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTM 892
T I GDDCI++ G + +I V CGPGHGISIGSLG+ KDEK+V + V++ T
Sbjct: 5866667 THISTGDDCIAMLSGNTNFDIYNVKCGPGHGISIGSLGKNKDEKNVNGLMVRNSVFTGTT 5866846
Query: 893 FGVRIKAYEDAASVLTVSKIHYENIKMEDSANPIFIDMKYCPNKLCT 1033
G+RIK +E +AS + + + YEN++M + NPI ID KYCP C+
Sbjct: 5866847 NGIRIKTWESSASTIRIINLVYENLQMINVENPIGIDQKYCPYPPCS 5866987
Score = 160 bits (345), Expect(6) = 1e-081
Identities = 58/132 (43%), Positives = 99/132 (75%)
Frame = +2 / -2
Query: 521 SLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGI 700
SL + N E++G++ +N+K FHM + + +++ I+++ +TAP +SPNTDGIH+ ++ +
Sbjct: 611588 SLKFRNMKNVEINGISSVNAKAFHMFLVKTENVNIQNIKLTAPAESPNTDGIHLSNADNV 611409
Query: 701 TITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTL 880
+I ++ I GDDC+S+G G++ V + V CGPGHG+S+GSLG+YK+E+DV+ I+V +CT+
Sbjct: 611408 SILDSTIATGDDCVSVGRGSNNVTVERVICGPGHGLSVGSLGKYKNEEDVSGIHVNNCTM 611229
Query: 881 KKTMFGVRIKAY 916
+T G+RIK +
Sbjct: 611228 IETDNGLRIKTW 611193
Score = 116 bits (249), Expect(4) = 2e-048
Identities = 40/85 (47%), Positives = 62/85 (72%)
Frame = +2 / -2
Query: 554 VSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGD 733
+SGV +NS+ HM + C ++++++V + APG+SPNTDG H+ S+G+T T + + GD
Sbjct: 1695128 ISGVKSMNSQVTHMTLNGCTNVVVRNVKLVAPGNSPNTDGFHVQHSTGVTFTGSTVQTGD 1694949
Query: 734 DCISIGPGTSKVNITGVTCGPGHGI 808
DC++IGPGT + IT + CGPGHG+
Sbjct: 1694948 DCVAIGPGTRNLLITKLACGPGHGV 1694874
Score = 106 bits (227), Expect(4) = 2e-039
Identities = 37/85 (43%), Positives = 59/85 (69%)
Frame = +2 / -2
Query: 554 VSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGD 733
+SGV +NS+ HM + C ++ ++++ + APGDSPNTDG + S+G+T+T + + GD
Sbjct: 1691111 ISGVKSMNSQVSHMTLNGCTNVAVRNIRLVAPGDSPNTDGFTVQFSTGVTLTGSTVQTGD 1690932
Query: 734 DCISIGPGTSKVNITGVTCGPGHGI 808
DC++IG GT I+ + CGPGHG+
Sbjct: 1690931 DCVAIGQGTRNFLISKLACGPGHGV 1690857
Score = 93.2 bits (197), Expect(4) = 2e-039
Identities = 35/94 (37%), Positives = 53/94 (56%)
Frame = +2 / -2
Query: 155 FDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGPCKGDVTI 334
F++ GA +G TDST A +AW ACG T+++P G FL+ + F GPCK +T
Sbjct: 1691921 FNVVSFGAKPDGVTDSTAAFLKAWQGACGSAASATVVVPTGTFLLKVITFGGPCKSKITF 1691742
Query: 335 QVDGNLLATTDLSQYKDHGNWIEILRVDNLVITG 436
QV G ++A D + + G+WI +V+ + G
Sbjct: 1691741 QVTGTVVAPEDYRTFGNSGSWILFNKVNRFSLVG 1691640
Score = 89.5 bits (189), Expect(4) = 2e-048
Identities = 35/94 (37%), Positives = 52/94 (55%)
Frame = +2 / -3
Query: 155 FDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGPCKGDVTI 334
F++ GA +G TDST A +AW AC T+++PKG FL+ + F GPCK +T
Sbjct: 1695853 FNVVSFGAKPDGVTDSTGAFLKAWQGACVSASSATVVVPKGTFLLKVITFGGPCKSKITF 1695674
Query: 335 QVDGNLLATTDLSQYKDHGNWIEILRVDNLVITG 436
QV G ++A D + + G WI +V+ + G
Sbjct: 1695673 QVAGTVIAPEDYRTFGNSGFWILFNKVNRFSLVG 1695572
Score = 84.0 bits (177), Expect(4) = 6e-033
Identities = 35/64 (54%), Positives = 44/64 (68%)
Frame = +2 / -1
Query: 728 GDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRI 907
GDDCISI G S V + V CGPGHGISIGSLG+ + V++I V+D + TM GVRI
Sbjct: 3515883 GDDCISIQTGCSNVFVHNVNCGPGHGISIGSLGKEGTKACVSNITVRDVAMHNTMTGVRI 3515704
Query: 908 KAYE 919
K ++
Sbjct: 3515703 KTWQ 3515692
Score = 68.0 bits (142), Expect(4) = 6e-033
Identities = 24/61 (39%), Positives = 41/61 (67%)
Frame = +2 / -1
Query: 551 EVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVG 730
EV+G+T+ NS H+ C +++ D+ V++PGDSPNTDGIH+ ++ + I +T + G
Sbjct: 3516138 EVTGITIQNSPQCHLKFDDCVGVVVHDIAVSSPGDSPNTDGIHLQNTKDVLIHSTTLACG 3515959
Query: 731 D 733
+
Sbjct: 3515958 N 3515956
Score = 64.3 bits (134), Expect(5) = 5e-062
Identities = 25/69 (36%), Positives = 37/69 (53%)
Frame = +2 / +3
Query: 1034 ANGASKVTVKDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNVEYSGTNNKTMAIC 1213
+ G S + +++VT KNI GTS AV C+ PC V + D+N+ + G + A+C
Sbjct: 5867076 SQGDSHIQIRNVTLKNIWGTSKNKVAVKFQCSKTFPCKDVQLIDINLTHHGVDGPASALC 5867255
Query: 1214 TNAKGSTKG 1240
N GS G
Sbjct: 5867256 ENVDGSATG 5867282
Score = 62.5 bits (130), Expect(6) = 1e-081
Identities = 22/47 (46%), Positives = 33/47 (70%)
Frame = +2 / -2
Query: 1046 SKVTVKDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNVEYSG 1186
S+V + D+ FKNI GT+ T + V ++C+ VPC GV + DVN++Y G
Sbjct: 610991 SQVAISDILFKNIRGTTITKDVVQIMCSKSVPCQGVNVVDVNLDYVG 610851
Score = 62.5 bits (130), Expect(4) = 6e-033
Identities = 22/46 (47%), Positives = 33/46 (71%)
Frame = +2 / -3
Query: 1046 SKVTVKDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNVEYS 1183
S V + VT+KNI GTS+T EA+ L+C+ PCTG+T+ D+ + Y+
Sbjct: 1694386 SGVKISQVTYKNIQGTSATQEAMKLVCSKSSPCTGITLQDIKLTYN 1694249
Score = 61.6 bits (128), Expect(4) = 2e-048
Identities = 22/46 (47%), Positives = 33/46 (71%)
Frame = +2 / -2
Query: 1046 SKVTVKDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNVEYS 1183
S V + VT+KNI GTS+T EA+ L+C+ PCTG+T+ D+ + Y+
Sbjct: 1690364 SGVKITQVTYKNIQGTSATQEAMKLVCSKSNPCTGITLQDIKLTYN 1690227
Score = 61.1 bits (127), Expect(6) = 1e-081
Identities = 23/53 (43%), Positives = 30/53 (56%)
Frame = +2 / -1
Query: 206 KAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATT 364
+A W C T+L+PKG FL G + F GPCK VT+ V G ++ATT
Sbjct: 611982 QAFLNTWIQVCDSPVPATLLVPKGTFLAGPVIFAGPCKSKVTVNVIGTIIATT 611824
Score = 60.6 bits (126), Expect(5) = 6e-035
Identities = 25/70 (35%), Positives = 44/70 (62%)
Frame = +2 / +2
Query: 521 SLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGI 700
+L ++ + +VSG+T+ NS+ + + R + + V V++PGDSPNTDGIH+ S+ +
Sbjct: 8328212 ALTIESSSGVKVSGLTIQNSQQMNFIIARSDSVRVSKVMVSSPGDSPNTDGIHITGSTNV 8328391
Query: 701 TITNTVIGVG 730
+ + IG G
Sbjct: 8328392 ILQDCKIGTG 8328421
Score = 58.8 bits (122), Expect(5) = 5e-062
Identities = 23/53 (43%), Positives = 29/53 (54%)
Frame = +2 / +2
Query: 200 STKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLA 358
S KA AW AC G + IP G F +G + F GPC G ++ +DG LLA
Sbjct: 5865998 SYKAFTNAWKDACRWNGPSKMYIPLGTFYLGGVTFVGPCDGKISFVIDGTLLA 5866156
Score = 54.7 bits (113), Expect(6) = 1e-081
Identities = 20/41 (48%), Positives = 24/41 (58%)
Frame = +2 / -1
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILP 517
W RVDNLV+TG G G+G AVW + C KK C + P
Sbjct: 611802 WFLFERVDNLVLTGTGTFHGKGEAVWKADGCGKKVQCNLPP 611680
Score = 48.3 bits (99), Expect(5) = 6e-035
Identities = 15/44 (34%), Positives = 30/44 (68%)
Frame = +2 / +1
Query: 1046 SKVTVKDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNVE 1177
S V + + ++NITGT+ + +A+ C+ VPC+ + +++VN+E
Sbjct: 8329087 SAVKISQIMYRNITGTTKSAKAIKFACSDTVPCSHIVLNNVNLE 8329218
Score = 43.2 bits (88), Expect(5) = 6e-035
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +2 / +3
Query: 728 GDDCISIGPGTSKVNITGVTCGPGHGI 808
GDDC+SI +S + + + CGPGHGI
Sbjct: 8328510 GDDCVSIVNASSNIKMKNIYCGPGHGI 8328590
Score = 40.5 bits (82), Expect(5) = 5e-062
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +2 / +2
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDC 505
WI ++ L + G G LDGQG WS C K +C
Sbjct: 5866190 WINFRYINYLTVFGDGTLDGQGKKSWSLIDCQKDNNC 5866300
Score = 37.7 bits (76), Expect(5) = 6e-035
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +2 / +2
Query: 941 VSKIHYENIKMEDSANPIFIDMKYCPNKLCTANGAS 1048
V I + N++M+D ANPI ID YC + N S
Sbjct: 8328878 VQGIRFTNVEMQDVANPILIDQFYCDSPTTCQNQVS 8328985
Score = 37.3 bits (75), Expect(4) = 2e-039
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +2 / -2
Query: 809 SIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYE 919
SIGSLG + V++I V+D +K + GVRIK ++
Sbjct: 505469 SIGSLGNHNSRACVSNITVRDSVIKYSDNGVRIKTWQ 505359
Score = 35.4 bits (71), Expect(4) = 6e-033
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +2 / -3
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKIL 514
WI+ ++ + + GKG +DG+G W ++S D K++
Sbjct: 3516532 WIDFTKLKGIKVQGKGVIDGRGSGWWQQDSPFIDSDTKLI 3516413
Score = 34.5 bits (69), Expect(4) = 2e-039
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2 / -2
Query: 938 TVSKIHYENIKMEDSANPIFIDMKYCPNKLC 1030
+VS + + NI ++ NPI ID YC K C
Sbjct: 505346 SVSGVTFNNIHVDSVRNPIIIDQYYCMTKDC 505254
Score = 34.5 bits (69), Expect(4) = 2e-048
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2 / -3
Query: 941 VSKIHYENIKMEDSANPIFIDMKYCPN 1021
V + ++N+ M + NPI ID YCP+
Sbjct: 1690579 VRNVFFQNLIMRNVQNPIIIDQNYCPS 1690499
Score = 34.5 bits (69), Expect(5) = 5e-062
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1 / +3
Query: 106 GRVKGHRCESVRAWWVLRHHQVGRLRQW 189
GR+ G E + +WV+++H+ +LR W
Sbjct: 147660 GRIPGRTAEEIERFWVMKNHRRSQLR*W 147743
Score = 33.6 bits (67), Expect(5) = 6e-035
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +2 / +2
Query: 797 GHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYE 919
G SIGSLG+ VT + + L++T G+RIK Y+
Sbjct: 8328647 GISCSIGSLGKDNTTGIVTQVVLDTALLRETTNGLRIKTYQ 8328769
Score = 33.1 bits (66), Expect(6) = 1e-081
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +2 / -2
Query: 86 CIVHGEKEESKGIDAKASGPGGSFDITKLGASGNGKTDSTK 208
C+ +GE + A SG +DITK GA G+G T++ K
Sbjct: 612200 CVANGEYLGGRRGLAANSGNPTVYDITKFGAVGDGSTNTFK 612078
Score = 28.6 bits (56), Expect(6) = 1e-081
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2 / -2
Query: 950 IHYENIKMEDSANPIFIDMKY 1012
I +ENI M+ NPI ID Y
Sbjct: 611162 IKFENIIMQSVKNPIIIDQNY 611100
>gb|AC022521.4|AC022521 Arabidopsis thaliana chromosome I BAC T14P4 genomic sequence,
complete sequence
Length = 121668
Score = 160 bits (345), Expect(6) = 1e-081
Identities = 58/132 (43%), Positives = 99/132 (75%)
Frame = +2 / +2
Query: 521 SLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGI 700
SL + N E++G++ +N+K FHM + + +++ I+++ +TAP +SPNTDGIH+ ++ +
Sbjct: 6308 SLKFRNMKNVEINGISSVNAKAFHMFLVKTENVNIQNIKLTAPAESPNTDGIHLSNADNV 6487
Query: 701 TITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTL 880
+I ++ I GDDC+S+G G++ V + V CGPGHG+S+GSLG+YK+E+DV+ I+V +CT+
Sbjct: 6488 SILDSTIATGDDCVSVGRGSNNVTVERVICGPGHGLSVGSLGKYKNEEDVSGIHVNNCTM 6667
Query: 881 KKTMFGVRIKAY 916
+T G+RIK +
Sbjct: 6668 IETDNGLRIKTW 6703
Score = 90.9 bits (192), Expect(4) = 6e-024
Identities = 46/106 (43%), Positives = 60/106 (56%)
Frame = -3 / -1
Query: 951 ILETVSTEAASSYALMRTPNIVFLRVQSLTLMSVTSFSSLYRPRLPMLMPWPGPQVTPVM 772
++ T + + L+ P V + VQ LT + +TS S LY PRLP L P PGPQ+T
Sbjct: 6738 LMSTALLGSDPPHVLILRPLSVSIIVQLLTWIPLTSSSFLYLPRLPTLRPCPGPQITRST 6559
Query: 771 FTLEVPGPMEMQSSPTPMTVLVMVIPDESPMWMPSVLGLSPGAVTV 634
TL P P E QSSP M + M+ W+PSVLGLS GAV++
Sbjct: 6558 VTLLEPRPTETQSSPVAMVLSRMLTLSALLKWIPSVLGLSAGAVSL 6421
Score = 62.5 bits (130), Expect(6) = 1e-081
Identities = 22/47 (46%), Positives = 33/47 (70%)
Frame = +2 / +2
Query: 1046 SKVTVKDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNVEYSG 1186
S+V + D+ FKNI GT+ T + V ++C+ VPC GV + DVN++Y G
Sbjct: 6905 SQVAISDILFKNIRGTTITKDVVQIMCSKSVPCQGVNVVDVNLDYVG 7045
Score = 62.0 bits (129), Expect(6) = 8e-025
Identities = 25/63 (39%), Positives = 40/63 (63%)
Frame = +2 / +3
Query: 542 NNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVI 721
+N V G+ + NS FH C+ + ++ + +TAP SPNTDGIH+ +S+ +TI N++I
Sbjct: 111807 SNLRVEGLQIKNSPQFHFRFDGCQGVHVESLHITAPPLSPNTDGIHIENSNSVTIYNSII 111986
Query: 722 GVG 730
G
Sbjct: 111987 SNG 111995
Score = 61.1 bits (127), Expect(6) = 1e-081
Identities = 23/53 (43%), Positives = 30/53 (56%)
Frame = +2 / +1
Query: 206 KAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATT 364
+A W C T+L+PKG FL G + F GPCK VT+ V G ++ATT
Sbjct: 5914 QAFLNTWIQVCDSPVPATLLVPKGTFLAGPVIFAGPCKSKVTVNVIGTIIATT 6072
Score = 54.7 bits (113), Expect(6) = 1e-081
Identities = 20/41 (48%), Positives = 24/41 (58%)
Frame = +2 / +1
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILP 517
W RVDNLV+TG G G+G AVW + C KK C + P
Sbjct: 6094 WFLFERVDNLVLTGTGTFHGKGEAVWKADGCGKKVQCNLPP 6216
Score = 43.7 bits (89), Expect(6) = 8e-025
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +2 / +2
Query: 728 GDDCISIGPGTSKVNITGVTCGPG 799
GDDC+SIG G+ V+I +TCGPG
Sbjct: 112253 GDDCVSIGSGSYDVDIRNLTCGPG 112324
Score = 42.8 bits (87), Expect(6) = 8e-025
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +2 / +3
Query: 125 DAKASGPGGSFDITKLGASGNGKTDSTKAVQEAWASAC 238
D A G +++ K GA G+G+TD T+A + AW S+C
Sbjct: 110973 DDPADDNNGIYNVRKYGAVGDGETDDTEAFKTAWDSSC 111086
Score = 37.7 bits (76), Expect(4) = 6e-024
Identities = 21/50 (42%), Positives = 27/50 (54%)
Frame = -3 / -1
Query: 1191 LVPLYSTLTSSMVTPVHGTLAVQSRLTASGVEEVPVMFLKVTSLTVTLEA 1042
++P S TS+ TP HGT + T S V VP+MFL SL T E+
Sbjct: 7050 VLPT*SKFTSTTFTPWHGTDLLHII*TTSFVIVVPLMFLNKISLIATCES 6901
Score = 37.3 bits (75), Expect(6) = 8e-025
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +2 / +3
Query: 809 SIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYE 919
SIGSLG + V++I V+D +K + GVRIK ++
Sbjct: 112428 SIGSLGNHNSRACVSNITVRDSVIKYSDNGVRIKTWQ 112538
Score = 36.3 bits (73), Expect(4) = 6e-024
Identities = 18/37 (48%), Positives = 20/37 (54%)
Frame = -3 / -2
Query: 519 LGRILQSYFLVQEFLLHTAGPCPSRFPLPVMTRLSTR 409
+G L FL Q TA P P P+PV TRLSTR
Sbjct: 6218 VGGRLHWTFLPQPSAFQTASPFPWNVPVPVRTRLSTR 6108
Score = 34.5 bits (69), Expect(6) = 8e-025
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2 / +3
Query: 938 TVSKIHYENIKMEDSANPIFIDMKYCPNKLC 1030
+VS + + NI ++ NPI ID YC K C
Sbjct: 112551 SVSGVTFNNIHVDSVRNPIIIDQYYCMTKDC 112643
Score = 33.6 bits (67), Expect(4) = 6e-024
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = -3 / -2
Query: 363 VVASRLPSTWMVTSPLQGPVKLSCPTRKSPLGMRIVCFPVPPHADAH 223
VVA +P T VT L GP K++ P + PLG V H H
Sbjct: 6071 VVAMIVPITLTVTLLLHGPAKMTGPAKNVPLGTSSVAGTGLSHTCIH 5931
Score = 33.1 bits (66), Expect(6) = 1e-081
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +2 / +2
Query: 86 CIVHGEKEESKGIDAKASGPGGSFDITKLGASGNGKTDSTK 208
C+ +GE + A SG +DITK GA G+G T++ K
Sbjct: 5696 CVANGEYLGGRRGLAANSGNPTVYDITKFGAVGDGSTNTFK 5818
Score = 30.4 bits (60), Expect(6) = 8e-025
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +2 / +1
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVW 472
W+ RV+ + + G+G +DG+G W
Sbjct: 111370 WLVFYRVNGMALKGEGVIDGRGQKWW 111447
Score = 28.6 bits (56), Expect(6) = 1e-081
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2 / +2
Query: 950 IHYENIKMEDSANPIFIDMKY 1012
I +ENI M+ NPI ID Y
Sbjct: 6734 IKFENIIMQSVKNPIIIDQNY 6796
>gb|AC009525.3| Arabidopsis thaliana chromosome I BAC F22D16 genomic sequence, complete
sequence
Length = 100239
Score = 160 bits (345), Expect(6) = 1e-081
Identities = 58/132 (43%), Positives = 99/132 (75%)
Frame = +2 / +2
Query: 521 SLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGI 700
SL + N E++G++ +N+K FHM + + +++ I+++ +TAP +SPNTDGIH+ ++ +
Sbjct: 80948 SLKFRNMKNVEINGISSVNAKAFHMFLVKTENVNIQNIKLTAPAESPNTDGIHLSNADNV 81127
Query: 701 TITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTL 880
+I ++ I GDDC+S+G G++ V + V CGPGHG+S+GSLG+YK+E+DV+ I+V +CT+
Sbjct: 81128 SILDSTIATGDDCVSVGRGSNNVTVERVICGPGHGLSVGSLGKYKNEEDVSGIHVNNCTM 81307
Query: 881 KKTMFGVRIKAY 916
+T G+RIK +
Sbjct: 81308 IETDNGLRIKTW 81343
Score = 90.9 bits (192), Expect(4) = 3e-024
Identities = 46/106 (43%), Positives = 60/106 (56%)
Frame = -3 / -1
Query: 951 ILETVSTEAASSYALMRTPNIVFLRVQSLTLMSVTSFSSLYRPRLPMLMPWPGPQVTPVM 772
++ T + + L+ P V + VQ LT + +TS S LY PRLP L P PGPQ+T
Sbjct: 81378 LMSTALLGSDPPHVLILRPLSVSIIVQLLTWIPLTSSSFLYLPRLPTLRPCPGPQITRST 81199
Query: 771 FTLEVPGPMEMQSSPTPMTVLVMVIPDESPMWMPSVLGLSPGAVTV 634
TL P P E QSSP M + M+ W+PSVLGLS GAV++
Sbjct: 81198 VTLLEPRPTETQSSPVAMVLSRMLTLSALLKWIPSVLGLSAGAVSL 81061
Score = 62.5 bits (130), Expect(6) = 1e-081
Identities = 22/47 (46%), Positives = 33/47 (70%)
Frame = +2 / +2
Query: 1046 SKVTVKDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNVEYSG 1186
S+V + D+ FKNI GT+ T + V ++C+ VPC GV + DVN++Y G
Sbjct: 81545 SQVAISDILFKNIRGTTITKDVVQIMCSKSVPCQGVNVVDVNLDYVG 81685
Score = 61.1 bits (127), Expect(6) = 1e-081
Identities = 23/53 (43%), Positives = 30/53 (56%)
Frame = +2 / +1
Query: 206 KAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATT 364
+A W C T+L+PKG FL G + F GPCK VT+ V G ++ATT
Sbjct: 80554 QAFLNTWIQVCDSPVPATLLVPKGTFLAGPVIFAGPCKSKVTVNVIGTIIATT 80712
Score = 54.7 bits (113), Expect(6) = 1e-081
Identities = 20/41 (48%), Positives = 24/41 (58%)
Frame = +2 / +1
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILP 517
W RVDNLV+TG G G+G AVW + C KK C + P
Sbjct: 80734 WFLFERVDNLVLTGTGTFHGKGEAVWKADGCGKKVQCNLPP 80856
Score = 37.7 bits (76), Expect(4) = 3e-024
Identities = 21/50 (42%), Positives = 27/50 (54%)
Frame = -3 / -1
Query: 1191 LVPLYSTLTSSMVTPVHGTLAVQSRLTASGVEEVPVMFLKVTSLTVTLEA 1042
++P S TS+ TP HGT + T S V VP+MFL SL T E+
Sbjct: 81690 VLPT*SKFTSTTFTPWHGTDLLHII*TTSFVIVVPLMFLNKISLIATCES 81541
Score = 36.3 bits (73), Expect(4) = 3e-024
Identities = 18/37 (48%), Positives = 20/37 (54%)
Frame = -3 / -2
Query: 519 LGRILQSYFLVQEFLLHTAGPCPSRFPLPVMTRLSTR 409
+G L FL Q TA P P P+PV TRLSTR
Sbjct: 80858 VGGRLHWTFLPQPSAFQTASPFPWNVPVPVRTRLSTR 80748
Score = 33.6 bits (67), Expect(4) = 3e-024
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = -3 / -2
Query: 363 VVASRLPSTWMVTSPLQGPVKLSCPTRKSPLGMRIVCFPVPPHADAH 223
VVA +P T VT L GP K++ P + PLG V H H
Sbjct: 80711 VVAMIVPITLTVTLLLHGPAKMTGPAKNVPLGTSSVAGTGLSHTCIH 80571
Score = 33.1 bits (66), Expect(6) = 1e-081
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +2 / +2
Query: 86 CIVHGEKEESKGIDAKASGPGGSFDITKLGASGNGKTDSTK 208
C+ +GE + A SG +DITK GA G+G T++ K
Sbjct: 80336 CVANGEYLGGRRGLAANSGNPTVYDITKFGAVGDGSTNTFK 80458
Score = 28.6 bits (56), Expect(6) = 1e-081
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2 / +2
Query: 950 IHYENIKMEDSANPIFIDMKY 1012
I +ENI M+ NPI ID Y
Sbjct: 81374 IKFENIIMQSVKNPIIIDQNY 81436
>emb|Y16230.1|ATPGA3GE Arabidopsis thaliana PGA3 gene
Length = 2469
Score = 160 bits (345), Expect(6) = 1e-081
Identities = 58/132 (43%), Positives = 99/132 (75%)
Frame = +2 / +2
Query: 521 SLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGI 700
SL + N E++G++ +N+K FHM + + +++ I+++ +TAP +SPNTDGIH+ ++ +
Sbjct: 1172 SLKFRNMKNVEINGISSVNAKAFHMFLVKTENVNIQNIKLTAPAESPNTDGIHLSNADNV 1351
Query: 701 TITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTL 880
+I ++ I GDDC+S+G G++ V + V CGPGHG+S+GSLG+YK+E+DV+ I+V +CT+
Sbjct: 1352 SILDSTIATGDDCVSVGRGSNNVTVERVICGPGHGLSVGSLGKYKNEEDVSGIHVNNCTM 1531
Query: 881 KKTMFGVRIKAY 916
+T G+RIK +
Sbjct: 1532 IETDNGLRIKTW 1567
Score = 90.9 bits (192), Expect(5) = 4e-030
Identities = 46/106 (43%), Positives = 60/106 (56%)
Frame = -3 / -1
Query: 951 ILETVSTEAASSYALMRTPNIVFLRVQSLTLMSVTSFSSLYRPRLPMLMPWPGPQVTPVM 772
++ T + + L+ P V + VQ LT + +TS S LY PRLP L P PGPQ+T
Sbjct: 1602 LMSTALLGSDPPHVLILRPLSVSIIVQLLTWIPLTSSSFLYLPRLPTLRPCPGPQITRST 1423
Query: 771 FTLEVPGPMEMQSSPTPMTVLVMVIPDESPMWMPSVLGLSPGAVTV 634
TL P P E QSSP M + M+ W+PSVLGLS GAV++
Sbjct: 1422 VTLLEPRPTETQSSPVAMVLSRMLTLSALLKWIPSVLGLSAGAVSL 1285
Score = 62.5 bits (130), Expect(6) = 1e-081
Identities = 22/47 (46%), Positives = 33/47 (70%)
Frame = +2 / +2
Query: 1046 SKVTVKDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNVEYSG 1186
S+V + D+ FKNI GT+ T + V ++C+ VPC GV + DVN++Y G
Sbjct: 1769 SQVAISDILFKNIRGTTITKDVVQIMCSKSVPCQGVNVVDVNLDYVG 1909
Score = 61.1 bits (127), Expect(6) = 1e-081
Identities = 23/53 (43%), Positives = 30/53 (56%)
Frame = +2 / +1
Query: 206 KAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATT 364
+A W C T+L+PKG FL G + F GPCK VT+ V G ++ATT
Sbjct: 778 QAFLNTWIQVCDSPVPATLLVPKGTFLAGPVIFAGPCKSKVTVNVIGTIIATT 936
Score = 54.7 bits (113), Expect(6) = 1e-081
Identities = 20/41 (48%), Positives = 24/41 (58%)
Frame = +2 / +1
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILP 517
W RVDNLV+TG G G+G AVW + C KK C + P
Sbjct: 958 WFLFERVDNLVLTGTGTFHGKGEAVWKADGCGKKVQCNLPP 1080
Score = 37.7 bits (76), Expect(5) = 4e-030
Identities = 21/50 (42%), Positives = 27/50 (54%)
Frame = -3 / -1
Query: 1191 LVPLYSTLTSSMVTPVHGTLAVQSRLTASGVEEVPVMFLKVTSLTVTLEA 1042
++P S TS+ TP HGT + T S V VP+MFL SL T E+
Sbjct: 1914 VLPT*SKFTSTTFTPWHGTDLLHII*TTSFVIVVPLMFLNKISLIATCES 1765
Score = 36.3 bits (73), Expect(5) = 4e-030
Identities = 18/37 (48%), Positives = 20/37 (54%)
Frame = -3 / -2
Query: 519 LGRILQSYFLVQEFLLHTAGPCPSRFPLPVMTRLSTR 409
+G L FL Q TA P P P+PV TRLSTR
Sbjct: 1082 VGGRLHWTFLPQPSAFQTASPFPWNVPVPVRTRLSTR 972
Score = 33.6 bits (67), Expect(5) = 4e-030
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = -3 / -2
Query: 363 VVASRLPSTWMVTSPLQGPVKLSCPTRKSPLGMRIVCFPVPPHADAH 223
VVA +P T VT L GP K++ P + PLG V H H
Sbjct: 935 VVAMIVPITLTVTLLLHGPAKMTGPAKNVPLGTSSVAGTGLSHTCIH 795
Score = 33.1 bits (66), Expect(6) = 1e-081
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +2 / +2
Query: 86 CIVHGEKEESKGIDAKASGPGGSFDITKLGASGNGKTDSTK 208
C+ +GE + A SG +DITK GA G+G T++ K
Sbjct: 560 CVANGEYLGGRRGLAANSGNPTVYDITKFGAVGDGSTNTFK 682
Score = 28.6 bits (56), Expect(6) = 1e-081
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2 / +2
Query: 950 IHYENIKMEDSANPIFIDMKY 1012
I +ENI M+ NPI ID Y
Sbjct: 1598 IKFENIIMQSVKNPIIIDQNY 1660
Score = 24.0 bits (46), Expect(5) = 4e-030
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = -3 / -1
Query: 195 VLPLPEAPNLVMSKDPPGPDAFASMPFDSSFSPCTMQK 82
V P P APNLV+S P+ A +SP Q+
Sbjct: 669 VEPSPTAPNLVIS*TVGLPELAARPRRPPRYSPLATQE 556
>dbj|AB023039.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MIF21
Length = 59372
Score = 220 bits (475), Expect(4) = 3e-077
Identities = 87/181 (48%), Positives = 123/181 (67%)
Frame = +2 / -2
Query: 509 ILPNSLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGD 688
IL S+ DFV + ++ G+T L++K FH+N+ K++ +DV + AP +SPNTDGIH+G
Sbjct: 11455 ILEQSIRFDFVTDAKIRGITSLDAKHFHINVIGAKNVTFEDVKIIAPAESPNTDGIHVGR 11276
Query: 689 SSGITITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVK 868
S GI I N+ I GDDC+S+G G + + VTCGPGHGISIGSLGRY E++V+ I +
Sbjct: 11275 SDGIKIINSFISTGDDCVSVGDGMKNLLVERVTCGPGHGISIGSLGRYSHEENVSGIKII 11096
Query: 869 DCTLKKTMFGVRIKAYEDAASVLTVSKIHYENIKMEDSANPIFIDMKYCPNKLCTANGAS 1048
+CTL++T G+RIK + AA T S IH+ENI +++ +NPI ID +YCP C +
Sbjct: 11095 NCTLQETDNGLRIKTWPSAACTTTASDIHFENILLKNVSNPILIDQEYCPWNQCNKQVRT 10916
Query: 1049 K 1051
K
Sbjct: 10915 K 10913
Score = 130 bits (279), Expect(3) = 2e-030
Identities = 63/135 (46%), Positives = 81/135 (60%)
Frame = -3 / +3
Query: 1032 VHNLLGQYFMSMKMGLAESSILIFS*WILETVSTEAASSYALMRTPNIVFLRVQSLTLMS 853
+H GQY SM+MGL +FS WI E V +AA + L+ P V RVQ + LM
Sbjct: 10932 LHWFHGQYSWSMRMGLLTFLRRMFSKWISEAVVVQAAEGHVLILRPLSVSWRVQLMILMP 11111
Query: 852 VTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVIPDESPMWM 673
+T S LY PRLP+L+P PGP VT +P P E QSSP + L+++IP P W+
Sbjct: 11112 LTFSSWLYLPRLPILIPCPGPHVTLSTRRFFIPSPTETQSSPVEINELMILIPSLLPTWI 11291
Query: 672 PSVLGLSPGAVTVTS 628
PSVLGLS GA+ +TS
Sbjct: 11292 PSVLGLSAGAMILTS 11336
Score = 62.5 bits (130), Expect(4) = 3e-077
Identities = 25/72 (34%), Positives = 38/72 (52%)
Frame = +2 / -3
Query: 1046 SKVTVKDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNVEYSGTNNKTMAICTNAK 1225
S + + +++FK I GTS +AV LLC+ PC V + DVN++Y+G + C+N
Sbjct: 10767 STIKLANISFKKIRGTSGNKDAVKLLCSKGYPCQNVEVGDVNIQYTGADGPATFQCSNVS 10588
Query: 1226 GSTKGCLKELAC 1261
G AC
Sbjct: 10587 PKLVGTQIPKAC 10552
Score = 46.9 bits (96), Expect(4) = 3e-077
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +2 / -3
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILP 517
W+ ++ + G G DG+G A W N+C K ++CK LP
Sbjct: 11649 WVAFRNINGFKLNGGGVFDGEGNAAWRVNNCHKTFNCKKLP 11527
Score = 46.9 bits (96), Expect(4) = 3e-077
Identities = 18/50 (36%), Positives = 31/50 (62%)
Frame = +2 / -3
Query: 209 AVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLA 358
A+ +A+ AC K T++IPKG++ +G++ GPCK + I + G + A
Sbjct: 11826 ALLKAFNEACQFPTKSTVMIPKGEYKLGEIVMMGPCKAPIRIALLGTVKA 11677
Score = 31.8 bits (63), Expect(3) = 2e-030
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = -3 / +2
Query: 357 ASRLPSTWMVTSPLQGPVKLSCPTRKSPLGMRIVCFPVPPHADAHASCTAFVLSVLPL 184
A +P ++ L GP+ P+ SP G+ V F HA +A A+++ +L +
Sbjct: 11678 AFTVPRRAILIGALHGPIITISPSLYSPFGIITVLFVGNWHASLNAFNNAYIVKILKI 11851
Score = 29.9 bits (59), Expect(3) = 2e-030
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -3 / +2
Query: 1185 PLYSTLTSSMVTPVHGTLAVQSRLTASGVEEVPVMFLKV 1069
P+Y TS T HG + TAS +VP++FLK+
Sbjct: 10628 PVYWMFTSPTSTF*HGYPLLHKSFTASLFPDVPLIFLKL 10744
>gb|AC002334.3| Arabidopsis thaliana chromosome 2 clone F25I18 map TEn5, complete
sequence
Length = 93158
Score = 149 bits (321), Expect(5) = 6e-077
Identities = 62/130 (47%), Positives = 83/130 (63%)
Frame = +2 / -2
Query: 395 WIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLL 574
WI VDNL +TG G LDGQG W N C K +C+ L ++ FV + +++G+ +
Sbjct: 46723 WILFKYVDNLTVTGGGLLDGQGSYSWPLNDCNKNTNCRTLAMNIGFAFVKSSKINGLRSI 46544
Query: 575 NSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGP 754
NSK H N++ +D I VT+TAPGDSPNTDGI +G SS + I N IG GDDCI+I
Sbjct: 46543 NSKMGHFNLFSVEDFNITGVTITAPGDSPNTDGIKIGKSSHMQIYNVTIGTGDDCIAILD 46364
Query: 755 GTSKVNITGV 784
GTS ++I+ V
Sbjct: 46363 GTSNLDISDV 46334
Score = 107 bits (229), Expect(5) = 6e-077
Identities = 42/85 (49%), Positives = 59/85 (69%)
Frame = +2 / -3
Query: 788 CGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASVLTVSKIHYENI 967
CGPGHGIS+GSLGRYK+EK+V + V++ + T G+RIK + + S ++VS YENI
Sbjct: 45972 CGPGHGISVGSLGRYKEEKNVQGLTVRNSIINGTTDGLRIKTWAKSVSQISVSNFLYENI 45793
Query: 968 KMEDSANPIFIDMKYCPNKLCTANG 1042
+M + NPI ID +YCP+ C + G
Sbjct: 45792 QMINVGNPIVIDQQYCPHGQCDSPG 45718
Score = 73.5 bits (154), Expect(2) = 2e-022
Identities = 48/134 (35%), Positives = 64/134 (47%)
Frame = -3 / +3
Query: 786 VTPVMFTLEVPGPMEMQSSPTPMTVLVMVIPDESPMWMPSVLGLSPGAVTVTSLISMSLH 607
+T + L VP + +QSSP P+ L + I + P+ +PSVLGLSPGAV VT ++ S
Sbjct: 46332 LTSEISKLLVPSRIAIQSSPVPIVTL*ICIWLDFPILIPSVLGLSPGAVMVTPVMLKSST 46511
Query: 606 RYMFMWKNLELSSVTPDTSPLFTKSITSELGRILQSYFLVQEFLLHTAGPCPSRFPLPVM 427
L L + P TK+ + + Q FL+Q P PS P PV
Sbjct: 46512 ENKLKCPILLLMDLRPLIFDDLTKANPMFIASVRQLVFLLQSLRGQE*DP*PSSNPPPVT 46691
Query: 426 TRLSTRRISIQLPW 385
RLST SI W
Sbjct: 46692 VRLSTYLKSIHSSW 46733
Score = 69.8 bits (146), Expect(5) = 6e-077
Identities = 27/73 (36%), Positives = 42/73 (57%)
Frame = +2 / -3
Query: 1043 ASKVTVKDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNVEYSGTNNKTMAICTNA 1222
AS V +KDV + NI GTS++ EA+ + C+ PC V + ++N+ Y G + A+C N
Sbjct: 45711 ASHVQIKDVKYNNIWGTSTSKEALKMQCSKTFPCQDVELSNINLHYVGRDGLVTALCENV 45532
Query: 1223 KGSTKGCLKELAC 1261
GS +G + C
Sbjct: 45531 GGSIRGKIVPANC 45493
Score = 66.6 bits (139), Expect(2) = 2e-022
Identities = 34/82 (41%), Positives = 47/82 (57%)
Frame = -3 / +2
Query: 1029 HNLLGQYFMSMKMGLAESSILIFS*WILETVSTEAASSYALMRTPNIVFLRVQSLTLMSV 850
H GQY SM +G I +FS ET + ++ L+R P++V L ++ LT+
Sbjct: 45731 HCPCGQYC*SMTIGFPTLIIWMFSYKKFETEICDTDLAHVLIRKPSVVPLIIEFLTVKPW 45910
Query: 849 TSFSSLYRPRLPMLMPWPGPQV 784
T FSSLY PRLP L+P PGP +
Sbjct: 45911 TFFSSLYLPRLPTLIPCPGPHL 45976
Score = 47.3 bits (97), Expect(5) = 6e-077
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +2 / -2
Query: 248 GKQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLA 358
G+ T+ IP G F + Q+ F+GPCK +T + G LLA
Sbjct: 46867 GRSTVYIPSGIFYLRQVTFSGPCKSSITFFIRGTLLA 46757
Score = 28.6 bits (56), Expect(5) = 6e-077
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +2 / -2
Query: 155 FDITKLGASGNGKTDSTKAVQEAWASAC 238
FD+ GA + + D+ A +AW AC
Sbjct: 46963 FDVRNYGARADSQRDNAFAFTKAWNEAC 46880
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 2,820,814,202
Number of Sequences: 1013581
Number of extensions: 39205695
Number of successful extensions: 214347
Number of sequences better than 1.0e-020: 247
length of database: 302,980,290
effective HSP length: 58
effective length of database: 244,192,592
effective search space used: 118189214528
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)