TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2623104.2.3
(1540 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|NM_111663.2| Arabidopsis thaliana polygalacturonase AT3... 327 4e-099
gb|AY065239.1| Arabidopsis thaliana putative polygalacturon... 327 1e-098
ref|NM_111661.2| Arabidopsis thaliana polygalacturonase AT3... 327 1e-098
gb|AY087578.1| Arabidopsis thaliana clone 36765 mRNA, compl... 327 1e-098
gb|AY096534.1| Arabidopsis thaliana putative polygalacturon... 327 1e-098
emb|AJ005584.1|ATH005584 Arabidopsis thaliana mRNA for poly... 327 2e-098
emb|X73222.1|ATEGP A.thaliana mRNA for exopolygalacturonase 195 1e-097
ref|NM_112258.2| Arabidopsis thaliana polygalacturonase AT3... 195 2e-097
emb|BX823174.1|CNS0A74O Arabidopsis thaliana Full-length cD... 323 3e-097
emb|X72292.1|ATEXOPB A.thaliana (clone GBGa483) mRNA for ex... 195 1e-096
gb|AY056173.1| Arabidopsis thaliana putative exopolygalactu... 195 7e-096
ref|NM_111664.1| Arabidopsis thaliana polygalacturonase AT3... 195 7e-096
gb|AY091200.1| Arabidopsis thaliana putative exopolygalactu... 195 7e-096
gb|AY089015.1| Arabidopsis thaliana clone 16377 mRNA, compl... 324 9e-096
ref|NM_111662.2| Arabidopsis thaliana polygalacturonase AT3... 321 1e-095
gb|AY062447.1| Arabidopsis thaliana polygalacturonase; pect... 195 1e-095
gb|AY114635.1| Arabidopsis thaliana polygalacturonase; pect... 195 1e-095
dbj|AK118684.1| Arabidopsis thaliana At5g48140 mRNA for put... 322 3e-095
ref|NM_124188.2| Arabidopsis thaliana polygalacturonase AT5... 322 3e-095
gb|BT009687.1| Arabidopsis thaliana At5g48140 mRNA, complet... 322 3e-095
gb|AF428425.1|AF428425 Arabidopsis thaliana At1g02790/T14P4... 219 4e-093
ref|NM_100158.1| Arabidopsis thaliana PGA4 (POLYGALACTURONA... 219 4e-093
gb|AY065210.1| Arabidopsis thaliana putative polygalacturon... 219 4e-093
emb|X72291.1|ATEXOPA A.thaliana (clone GBGe184) mRNA for ex... 219 4e-093
gb|AY133812.1| Arabidopsis thaliana clone U18487 putative p... 219 4e-093
ref|NM_117928.1| Arabidopsis thaliana polygalacturonase AT4... 316 4e-093
ref|NM_128875.1| Arabidopsis thaliana polygalacturonase AT2... 253 2e-092
ref|NM_106487.2| Arabidopsis thaliana polygalacturonase AT1... 282 2e-092
ref|NM_101576.1| Arabidopsis thaliana polygalacturonase AT1... 284 8e-092
gb|AC013483.7|ATAC013483 Arabidopsis thaliana chromosome II... 220 7e-091
emb|AJ003135.1|ATAJ3135 Arabidopsis thaliana PGA5 gene, com... 219 1e-090
ref|NM_128219.1| Arabidopsis thaliana polygalacturonase AT2... 311 1e-090
emb|BX822574.1|CNS0A73L Arabidopsis thaliana Full-length cD... 303 4e-090
emb|BX823616.1|CNS0A4Y3 Arabidopsis thaliana Full-length cD... 168 1e-087
ref|NM_103464.1| Arabidopsis thaliana polygalacturonase AT1... 258 8e-087
gb|DQ056483.1| Arabidopsis thaliana glycoside hydrolase fam... 257 2e-086
ref|NM_103463.1| Arabidopsis thaliana polygalacturonase AT1... 257 2e-086
ref|NM_129589.1| Arabidopsis thaliana polygalacturonase AT2... 254 8e-086
ref|NM_127106.1| Arabidopsis thaliana polygalacturonase AT2... 257 8e-086
ref|NM_127105.1| Arabidopsis thaliana polygalacturonase AT2... 256 1e-085
ref|NM_103465.1| Arabidopsis thaliana polygalacturonase AT1... 258 3e-085
ref|NM_117450.1| Arabidopsis thaliana polygalacturonase AT4... 256 1e-084
emb|BX819999.1|CNS0AA2M Arabidopsis thaliana Full-length cD... 251 6e-084
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 185 6e-084
gb|AC022521.4|AC022521 Arabidopsis thaliana chromosome I BA... 168 7e-084
gb|AC009525.3| Arabidopsis thaliana chromosome I BAC F22D16... 168 7e-084
emb|Y16230.1|ATPGA3GE Arabidopsis thaliana PGA3 gene 168 8e-084
ref|NM_127107.2| Arabidopsis thaliana polygalacturonase AT2... 255 2e-083
dbj|AB023039.1| Arabidopsis thaliana genomic DNA, chromosom... 224 1e-078
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 217 2e-077
emb|AL161548.2|ATCHRIV48 Arabidopsis thaliana DNA chromosom... 119 3e-077
emb|AL021713.1|ATT9A21 Arabidopsis thaliana DNA chromosome ... 119 3e-077
emb|AL110123.1|ATF15J5 Arabidopsis thaliana DNA chromosome ... 119 3e-077
gb|AC002334.3| Arabidopsis thaliana chromosome 2 clone F25I... 147 6e-077
emb|AJ223189.1|ATAJ3189 Arabidopsis thaliana PGA2 gene 168 2e-075
emb|AX507825.1| Sequence 2520 from Patent WO0216655 145 2e-074
ref|NM_100446.1| Arabidopsis thaliana polygalacturonase AT1... 145 2e-074
gb|AC026757.12|AC026757 Arabidopsis thaliana chromosome 1 B... 217 3e-074
gb|AC002505.3| Arabidopsis thaliana chromosome 2 clone T9J2... 219 6e-074
gb|AC007020.5| Arabidopsis thaliana chromosome 2 clone T3G2... 212 1e-073
gb|AC006920.11| Arabidopsis thaliana chromosome 2 clone F26... 219 1e-073
gb|AF085279.1|AF085279 Arabidopsis thaliana ABA-regulated g... 212 2e-073
ref|NM_100445.1| Arabidopsis thaliana polygalacturonase AT1... 137 7e-073
gb|DQ056578.1| Arabidopsis thaliana putative polygalacturon... 151 3e-072
ref|NM_129951.1| Arabidopsis thaliana polygalacturonase AT2... 151 3e-072
emb|AL035528.2|ATF18A5 Arabidopsis thaliana DNA chromosome ... 217 5e-072
ref|NM_115611.2| Arabidopsis thaliana ADPG1; polygalacturon... 149 5e-072
dbj|AK117942.1| Arabidopsis thaliana At3g57510 mRNA for put... 149 5e-072
emb|AX412563.1| Sequence 327 from Patent WO0222675 149 5e-072
gb|BT005376.1| Arabidopsis thaliana At3g57510 mRNA, complet... 149 5e-072
emb|AX651724.1| Sequence 557 from Patent WO03000898 149 5e-072
dbj|AK117953.1| Arabidopsis thaliana At3g07830 mRNA for put... 273 9e-072
ref|NM_106666.2| Arabidopsis thaliana polygalacturonase AT1... 150 1e-071
gb|AY046002.1| Arabidopsis thaliana putative polygalacturon... 150 1e-071
gb|AY142668.1| Arabidopsis thaliana putative polygalacturon... 150 1e-071
emb|AL161537.2|ATCHRIV37 Arabidopsis thaliana DNA chromosom... 217 2e-071
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 217 3e-071
gb|AC006248.4| Arabidopsis thaliana chromosome 2 clone F9O1... 219 6e-071
ref|NM_129950.1| Arabidopsis thaliana polygalacturonase AT2... 146 2e-070
dbj|AB019229.1| Arabidopsis thaliana genomic DNA, chromosom... 168 1e-069
emb|AX652128.1| Sequence 1979 from Patent WO03000898 216 8e-069
gb|AC013430.5|AC013430 Genomic sequence for Arabidopsis tha... 216 8e-069
gb|AC007651.2| Arabidopsis thaliana chromosome I BAC F20D23... 185 9e-069
ref|NM_180028.1| Arabidopsis thaliana polygalacturonase AT2... 140 7e-068
emb|AX651722.1| Sequence 554 from Patent WO03000898 139 2e-067
emb|BX822956.1|CNS0A7SM Arabidopsis thaliana Full-length cD... 100 1e-066
gb|AY078936.1| Arabidopsis thaliana At2g41850/T11A7.5 mRNA,... 141 2e-066
ref|NM_111676.3| Arabidopsis thaliana polygalacturonase AT3... 148 4e-066
emb|BX813348.1|CNS0AE3X Arabidopsis thaliana Full-length cD... 148 7e-066
ref|NM_105718.1| Arabidopsis thaliana polygalacturonase AT1... 139 4e-065
gb|AU238792.1|AU238792 AU238792 RAFL19 Arabidopsis thaliana... 249 2e-064
ref|NM_102195.1| Arabidopsis thaliana polygalacturonase AT1... 140 8e-064
gb|BT020180.1| Arabidopsis thaliana At3g59850 mRNA, complet... 155 1e-063
gb|BT015766.1| Arabidopsis thaliana At3g59850 mRNA, complet... 155 2e-063
emb|BX823105.1|CNS0A4UN Arabidopsis thaliana Full-length cD... 155 2e-063
emb|BX824927.1|CNS0A4TY Arabidopsis thaliana Full-length cD... 155 2e-063
ref|NM_115848.3| Arabidopsis thaliana polygalacturonase AT3... 155 2e-063
gb|BT005245.1| Arabidopsis thaliana At3g07830 mRNA, complet... 245 3e-063
ref|NM_105231.1| Arabidopsis thaliana polygalacturonase AT1... 160 1e-061
emb|BX822380.1|CNS0A76T Arabidopsis thaliana Full-length cD... 155 2e-061
emb|AX651258.1| Sequence 42 from Patent WO03000898 157 9e-061
ref|NM_129949.1| Arabidopsis thaliana polygalacturonase AT2... 157 9e-061
emb|BX813651.1|CNS0AEBF Arabidopsis thaliana Full-length cD... 139 2e-059
gb|DQ056577.1| Arabidopsis thaliana putative polygalacturon... 155 6e-059
ref|NM_129948.1| Arabidopsis thaliana polygalacturonase AT2... 155 6e-059
ref|NM_121726.1| Arabidopsis thaliana polygalacturonase AT5... 154 7e-059
gb|CK118633.1|CK118633 216g11.p1 AtM1 Arabidopsis thaliana ... 216 1e-058
ref|NM_103706.2| Arabidopsis thaliana polygalacturonase AT1... 154 1e-058
gb|AF410319.1|AF410319 Arabidopsis thaliana At1g48100/F21D1... 154 1e-058
gb|AY050798.1| Arabidopsis thaliana putative polygalacturon... 154 1e-058
gb|AY096360.1| Arabidopsis thaliana putative polygalacturon... 154 1e-058
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 224 7e-057
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 224 7e-057
emb|BX814380.1|CNS0AC2P Arabidopsis thaliana Full-length cD... 154 9e-057
emb|BX813953.1|CNS0AEHM Arabidopsis thaliana Full-length cD... 149 1e-056
gb|AC007153.2| Arabidopsis thaliana chromosome I BAC F3F20 ... 117 2e-056
ref|NM_121469.3| Arabidopsis thaliana polygalacturonase AT5... 147 5e-056
emb|BX831614.1|CNS09YP6 Arabidopsis thaliana Full-length cD... 147 5e-056
emb|BX815901.1|CNS0AEH8 Arabidopsis thaliana Full-length cD... 99 8e-056
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 220 1e-055
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 220 1e-055
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 219 2e-055
ref|NM_112442.1| Arabidopsis thaliana polygalacturonase AT3... 149 3e-055
gb|AY089177.1| Arabidopsis thaliana clone 6 mRNA, complete ... 149 3e-055
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 217 6e-055
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 217 8e-055
gb|BT005780.1| Arabidopsis thaliana clone RAFL14-98-K19 (R2... 147 1e-054
gb|AC004005.3| Arabidopsis thaliana chromosome 2 clone F6E1... 120 5e-054
emb|BX824469.1|CNS0A6Z5 Arabidopsis thaliana Full-length cD... 138 9e-054
ref|NM_122635.2| Arabidopsis thaliana polygalacturonase AT5... 146 3e-052
emb|BX825672.1|CNS0A7UV Arabidopsis thaliana Full-length cD... 131 6e-052
gb|AC001229.1|F5I14 Sequence of BAC F5I14 from Arabidopsis ... 160 2e-051
gb|BT000611.1| Arabidopsis thaliana putative polygalacturon... 148 3e-051
gb|AY060568.1| Arabidopsis thaliana At1g60590/F8A5_12 mRNA,... 148 5e-051
ref|NM_104742.3| Arabidopsis thaliana polygalacturonase AT1... 148 8e-051
ref|NM_123354.1| Arabidopsis thaliana polygalacturonase AT5... 161 1e-050
gb|BX836604.1|BX836604 BX836604 Arabidopsis thaliana Flower... 101 3e-050
ref|NM_148391.1| Arabidopsis thaliana polygalacturonase AT4... 171 6e-050
emb|AL772721.1| Arabidopsis thaliana transposon insertion S... 198 4e-049
gb|AF037367.1| Arabidopsis thaliana endo-polygalacturonase ... 69 4e-049
dbj|AK117620.1| Arabidopsis thaliana At3g26610 mRNA for put... 134 4e-049
ref|NM_113570.2| Arabidopsis thaliana polygalacturonase AT3... 134 4e-049
emb|BX814728.1|CNS0AAT1 Arabidopsis thaliana Full-length cD... 148 2e-048
emb|AJ002532.1|ATAJ2532 Arabidopsis thaliana ADPG1 gene 69 2e-048
gb|AC002333.3| Arabidopsis thaliana chromosome 2 clone F18O... 120 2e-048
emb|BX821033.1|CNS0AACW Arabidopsis thaliana Full-length cD... 100 3e-048
ref|NM_123852.1| Arabidopsis thaliana polygalacturonase AT5... 148 3e-048
ref|NM_100127.2| Arabidopsis thaliana polygalacturonase AT1... 102 2e-047
gb|BT023462.1| Arabidopsis thaliana At1g02460 gene, complet... 102 2e-047
emb|AL138647.1|ATF24G16 Arabidopsis thaliana DNA chromosome... 117 2e-046
ref|NM_116419.2| Arabidopsis thaliana polygalacturonase AT4... 98 6e-045
ref|NM_119390.2| Arabidopsis thaliana polygalacturonase AT4... 126 9e-045
ref|NM_100940.3| Arabidopsis thaliana polygalacturonase AT1... 144 6e-043
gb|AY039852.1| Arabidopsis thaliana At1g10640/F20B24_8 mRNA... 144 6e-043
emb|X97828.1|ATORF06 A.thaliana mRNA (orf06) from chromosom... 134 7e-043
gb|AI994651.1|AI994651 701499138 A. thaliana, Ohio State cl... 122 2e-042
ref|NM_104548.2| Arabidopsis thaliana polygalacturonase AT1... 143 5e-042
gb|AC009322.1|AC009322 Arabidopsis thaliana chromosome I BA... 61 8e-042
ref|NM_119732.2| Arabidopsis thaliana polygalacturonase AT4... 152 3e-041
ref|NM_123851.1| Arabidopsis thaliana polygalacturonase AT5... 148 4e-041
gb|AY143959.1| Arabidopsis thaliana At1g10640/F20B24_8 mRNA... 144 3e-040
emb|CQ805350.1| Sequence 1761 from Patent WO2004035798 144 3e-040
ref|NM_106663.1| Arabidopsis thaliana polygalacturonase AT1... 124 4e-040
dbj|AB005238.1| Arabidopsis thaliana genomic DNA, chromosom... 105 6e-040
emb|AL133248.1|ATT8H10 Arabidopsis thaliana DNA chromosome ... 69 1e-039
emb|BX813497.1|CNS0ADHO Arabidopsis thaliana Full-length cD... 102 2e-039
emb|BX816708.1|CNS0AD6H Arabidopsis thaliana Full-length cD... 131 2e-038
emb|AL163792.1|ATT15N1 Arabidopsis thaliana DNA chromosome ... 92 8e-038
emb|BX816284.1|CNS0AD4M Arabidopsis thaliana Full-length cD... 143 1e-037
gb|AQ010492.1|AQ010492 F23M1TFB IGF Arabidopsis thaliana ge... 137 2e-037
emb|AX461137.1| Sequence 66 from Patent WO0198480 62 4e-037
emb|AX461255.1| Sequence 184 from Patent WO0198480 62 4e-037
gb|AC010796.7|AC010796 Arabidopsis thaliana chromosome 1 BA... 61 8e-036
ref|NM_119389.2| Arabidopsis thaliana polygalacturonase AT4... 64 2e-035
gb|AC023673.3|AC023673 Genomic sequence for Arabidopsis tha... 71 2e-035
gb|AC002339.3| Arabidopsis thaliana chromosome 2 clone T11A... 62 1e-034
gb|AC002292.1|AC002292 Arabidopsis thaliana BAC F8A5, compl... 83 3e-034
gb|AC005990.1|F5O8 Arabidopsis thaliana chromosome 1 BAC F5... 60 3e-034
gb|AC007945.3|AC007945 Genomic sequence for Arabidopsis tha... 60 3e-034
gb|AV782140.1|AV782140 AV782140 RAFL4 Arabidopsis thaliana ... 90 4e-033
dbj|AB010077.1| Arabidopsis thaliana genomic DNA, chromosom... 62 5e-033
dbj|AB017071.1| Arabidopsis thaliana genomic DNA, chromosom... 63 2e-032
emb|AL034567.1|ATF8B4 Arabidopsis thaliana DNA chromosome 4... 55 4e-032
gb|AC009398.6|AC009398 Genomic sequence for Arabidopsis tha... 82 9e-032
gb|CD531316.1|CD531316 10F09 Arabidopsis Leaf Senescence Li... 88 2e-031
emb|AL161581.2|ATCHRIV77 Arabidopsis thaliana DNA chromosom... 55 1e-030
gb|AW004489.1|AW004489 701931827 A. thaliana, mixed source ... 119 1e-028
gb|B28793.1|B28793 T19O12TR TAMU Arabidopsis thaliana genom... 96 2e-028
gb|AI995224.1|AI995224 701502760 A. thaliana, Ohio State cl... 128 3e-028
gb|BP815552.1|BP815552 BP815552 RAFL19 Arabidopsis thaliana... 127 1e-027
gb|B09328.1|B09328 F2P23-T7 IGF Arabidopsis thaliana genomi... 79 1e-027
gb|AI993509.1|AI993509 701496530 A. thaliana, Ohio State cl... 84 1e-027
gb|R29820.1|R29820 12425 Lambda-PRL2 Arabidopsis thaliana c... 124 8e-027
emb|AL089539.1|CNS00TD1 Arabidopsis thaliana genome survey ... 95 1e-026
gb|AV532721.1|AV532721 AV532721 Arabidopsis thaliana flower... 123 1e-026
gb|AQ250348.1|AQ250348 T12D16-Sp6.2 TAMU Arabidopsis thalia... 69 4e-026
gb|AC002342.1|ATAC002342 Arabidopsis thaliana chromosome V ... 68 5e-026
gb|AQ964056.1|AQ964056 LERGU38TF LERG Arabidopsis thaliana ... 91 9e-026
gb|AQ964057.1|AQ964057 LERGU38TR LERG Arabidopsis thaliana ... 91 9e-026
gb|AC064879.3|AC064879 Arabidopsis thaliana chromosome I BA... 64 1e-025
dbj|AB016874.1| Arabidopsis thaliana genomic DNA, chromosom... 63 2e-025
dbj|AB010693.1| Arabidopsis thaliana genomic DNA, chromosom... 68 2e-025
gb|BH792479.1|BH792479 SALK_064312.54.50.x Arabidopsis thal... 117 7e-025
gb|BZ666496.1|BZ666496 SGT6366-3-3 Arabidopsis thaliana Ds ... 117 7e-025
emb|CR357101.1| Arabidopsis thaliana T-DNA flanking sequenc... 117 7e-025
gb|AC009323.4|AC009323 Arabidopsis thaliana chromosome I BA... 64 9e-025
emb|AL091488.1|CNS00UV6 Arabidopsis thaliana genome survey ... 71 4e-024
gb|BH613065.1|BH613065 SALK_033719 Arabidopsis thaliana TDN... 115 5e-024
gb|BH613074.1|BH613074 SALK_033729 Arabidopsis thaliana TDN... 115 5e-024
gb|B78058.1|B78058 T30C17TR TAMU Arabidopsis thaliana genom... 75 1e-023
gb|BP815506.1|BP815506 BP815506 RAFL19 Arabidopsis thaliana... 87 1e-023
emb|AJ552539.1|ATH552539 Arabidopsis thaliana T-DNA flankin... 78 2e-023
gb|AC007138.1| Arabidopsis thaliana BAC T7B11 from chromoso... 55 6e-023
gb|AV822112.1|AV822112 AV822112 RAFL5 Arabidopsis thaliana ... 88 6e-023
emb|X98130.1|AT81KBGEN Arabidopsis thaliana 81kb genomic se... 52 3e-022
dbj|AB028611.1| Arabidopsis thaliana genomic DNA, chromosom... 52 3e-022
gb|B09652.1|B09652 T25H4-T7 TAMU Arabidopsis thaliana genom... 51 4e-022
emb|AL161493.2|ATCHRIV5 Arabidopsis thaliana DNA chromosome... 55 6e-022
emb|BX894310.1| Arabidopsis thaliana T-DNA flanking sequenc... 87 8e-022
gb|B09753.1|B09753 F24F5-Sp6 IGF Arabidopsis thaliana genom... 107 8e-022
gb|B29424.1|B29424 F18O19TRE IGF Arabidopsis thaliana genom... 107 8e-022
gb|AV535049.1|AV535049 AV535049 Arabidopsis thaliana flower... 107 1e-021
gb|AQ961164.1|AQ961164 LERFJ55TF LERA Arabidopsis thaliana ... 55 1e-021
gb|B12788.1|B12788 F7K19-T7 IGF Arabidopsis thaliana genomi... 68 2e-021
gb|B26350.1|B26350 F24F5TR IGF Arabidopsis thaliana genomic... 105 4e-021
gb|BZ761414.1|BZ761414 SALK_000385.29.85.x Arabidopsis thal... 100 7e-021
>ref|NM_111663.2| Arabidopsis thaliana polygalacturonase AT3G07840 mRNA, complete cds
Length = 1296
Score = 327 bits (709), Expect(2) = 4e-099
Identities = 131/289 (45%), Positives = 179/289 (61%)
Frame = +2 / +1
Query: 392 WIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGITLL 571
W+ LR++ + G G DG+G A W N+C K ++CK LP S+ DFV N E+ I+ +
Sbjct: 385 WVVFLRINGFKLNGGGIFDGEGNAAWRVNNCHKTFECKKLPISIRFDFVENAEIRDISSI 564
Query: 572 NSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGP 751
++K FH+N+ K+M +V V AP +SPNTDGIH+G S GV I N+ I GDDCIS+G
Sbjct: 565 DAKNFHINVLGAKNMTFDNVKVIAPAESPNTDGIHLGRSEGVKILNSKIATGDDCISVGD 744
Query: 752 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAYEDAASV 931
G +++ V CGPGHGIS+GSLGRY E+DVT I V +CTL+ T NG+RIK + AA
Sbjct: 745 GMKNLHVENVMCGPGHGISVGSLGRYVHEQDVTGITVVNCTLQGTDNGLRIKTWPSAACA 924
Query: 932 LTASKIHYENIKMEDSGYPIIIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAV 1111
TAS IH+ENI + + PI+ID +YCP C S + + D++FKNI GTS +AV
Sbjct: 925 TTASGIHFENIILNNVSNPILIDQEYCPWNQCNKQKPSTIKLVDISFKNIRGTSGNKDAV 1104
Query: 1112 NLLCSAKIPCTGVTMDDVNIKYSGTNNKTMAVCKNAKGSAKGCLKELAC 1258
LLCS PC V + ++N++Y G + +C N G AC
Sbjct: 1105 KLLCSKAHPCANVEIGNINLEYKGADGPPTFMCSNVSPKLVGTQNPKAC 1251
Score = 171 bits (369), Expect(2) = 2e-044
Identities = 97/240 (40%), Positives = 128/240 (53%)
Frame = -2 / -2
Query: 1149 TPVHGILAEQSRLTASGVEEVPVMFLKVTSLTVTLEAPLAVHNLLGQYFMSMMMG*PESS 970
T HG + TAS +VP++FLK+ S ++ ++ +H GQY SM +G
Sbjct: 1142 TFAHGCALLHNSFTASLFPDVPLIFLKLMSTSLIVDGFCLLHWFQGQYSWSMRIGLLTLL 963
Query: 969 ILIFS*WILEAVSTEAASSYALMRTPLAVFLSVQSLTLISVTSFSSLYRPRLPMLMPWPG 790
++FS I EAV +AA + L+ +PL+V VQ T++ VTS S Y PRLP L+P PG
Sbjct: 962 RMMFSK*IPEAVVAQAADGHVLILSPLSVP*RVQFTTVMPVTSCSCTYLPRLPTLIPCPG 783
Query: 789 PQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVTPDESPMWMPSVLGLSPGAVTLTSLISMS 610
P +T + +P P EMQSSP + L ++TP P W+PSVLGLS GA+TLT M
Sbjct: 782 PHITFSTWRFFIPSPTEMQSSPVAILELRILTPSLLPKWIPSVLGLSAGAMTLTLSKVMF 603
Query: 609 LHLYMFMWKNLELSSVIPDTSPLFTKSITSELGRILQSYFLTQEFLLHTAGPCPSSFPLP 430
L FMWK L + S TKS +G L S L Q L A P PS P P
Sbjct: 602 LAPRTFMWKFLASIEDMSLISAFSTKSNLILMGSFLHSKVL*QLLTLQAALPSPSKIPPP 423
Score = 57.9 bits (120), Expect(2) = 4e-099
Identities = 27/80 (33%), Positives = 41/80 (51%)
Frame = +2 / +1
Query: 143 GGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCKGD 322
G S + G+ +D T+A+ +A+ SAC ++I KG+F +G + TGPCK
Sbjct: 142 GFSANAEVFNVGGSPGSDITQALLKAFTSACQAPTASKVVITKGEFKLGEIEMTGPCKAP 321
Query: 323 VTIQVNGNLLATTDLSQYKD 382
V I + G L A Q K+
Sbjct: 322 VEINLQGTLKADGKAIQGKE 381
Score = 31.3 bits (62), Expect(2) = 2e-044
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2 / -2
Query: 381 SLYWLRSVVASRLPFTWMVTSPLHGPVKLSGPTRKSP 271
S W+ A R+P+ + T LHGPV P+ SP
Sbjct: 380 SFPWIAFPSALRVPWRLISTGALHGPVISISPSLNSP 270
>gb|AY065239.1| Arabidopsis thaliana putative polygalacturonase(PGA3 (At3g07820)
mRNA, complete cds
Length = 1401
Score = 327 bits (709), Expect(2) = 1e-098
Identities = 130/289 (44%), Positives = 182/289 (62%)
Frame = +2 / +2
Query: 392 WIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGITLL 571
W+ +D + G G DG+G A W N+C K ++CK LP S+ DF+ N E+ I+ +
Sbjct: 359 WVVFGNIDGFKLNGGGAFDGEGNAAWRVNNCHKTFECKKLPISIRFDFILNSEIRDISSI 538
Query: 572 NSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGP 751
++K FH+N+ K+M + ++ + AP DSPNTDGIH+G S GV I N+ I GDDCIS+G
Sbjct: 539 DAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGVKILNSFISTGDDCISVGD 718
Query: 752 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAYEDAASV 931
G +++ VTCGPGHGIS+GSLGRY E+DV+ I V +CTL++T NG+RIK + AA
Sbjct: 719 GMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTLQETDNGLRIKTWPSAACS 898
Query: 932 LTASKIHYENIKMEDSGYPIIIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAV 1111
TAS IH+E+I ++D PI+ID +YCP C AS + + +++FKNI GTS +AV
Sbjct: 899 TTASDIHFEDIILKDVSNPILIDQEYCPWNQCNKQKASTIKLVNISFKNIRGTSGNKDAV 1078
Query: 1112 NLLCSAKIPCTGVTMDDVNIKYSGTNNKTMAVCKNAKGSAKGCLKELAC 1258
LLCS PC V + D++IKY+G + C N G AC
Sbjct: 1079 KLLCSKGYPCQNVEIGDIDIKYNGADGPATFHCSNVSPKILGSQSPKAC 1225
Score = 162 bits (349), Expect(2) = 9e-042
Identities = 96/237 (40%), Positives = 122/237 (51%)
Frame = -2 / -1
Query: 1140 HGILAEQSRLTASGVEEVPVMFLKVTSLTVTLEAPLAVHNLLGQYFMSMMMG*PESSILI 961
HG QS TAS +VP+MFLK+ + ++A +H GQY SM +G S +I
Sbjct: 1107 HGYPLLQSSFTASLFPDVPLMFLKLMFTNLIVDAFCLLHWFQGQYSWSMRIGLLTSLRII 928
Query: 960 FS*WILEAVSTEAASSYALMRTPLAVFLSVQSLTLISVTSFSSLYRPRLPMLMPWPGPQV 781
S I +AV +AA + L+ PL+V VQ +TL+ +TS S Y PRLP L+P PGP V
Sbjct: 927 SSK*ISDAVVEQAAEGHVLILNPLSVS*RVQLMTLMPLTSCSCPYLPRLPTLIPCPGPHV 748
Query: 780 TPVMFTLEVPGPMEMQSSPTPMTVLVMVTPDESPMWMPSVLGLSPGAVTLTSLISMSLHL 601
T +P P E+QSSP M L ++TP P W+PSVLGLS GA L + M L
Sbjct: 747 TFST*RFFIPSPTEIQSSPVEMKELRILTPSLLPKWIPSVLGLSSGATILMLFMVMFLAP 568
Query: 600 YMFMWKNLELSSVIPDTSPLFTKSITSELGRILQSYFLTQEFLLHTAGPCPSSFPLP 430
MWK L + S KS +G L S L Q L A P PS P P
Sbjct: 567 NTLMWKFLASIEDMSLISEFNMKSNLILMGSFLHSKVL*QLLTLQAALPSPSKAPPP 397
Score = 56.5 bits (117), Expect(2) = 1e-098
Identities = 21/64 (32%), Positives = 38/64 (59%)
Frame = +2 / +2
Query: 191 TDSTKAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCKGDVTIQVNGNLLATTDLS 370
+D T+A+ +A+ SAC + ++IPKG+F +G + GPCK + + + G + A +
Sbjct: 164 SDITQALLKAFTSACQSSSPSKVVIPKGEFKLGEIEMRGPCKAPIEVTLQGTVKADGNAI 343
Query: 371 QYKD 382
Q K+
Sbjct: 344 QGKE 355
Score = 31.3 bits (62), Expect(2) = 9e-042
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = -2 / -1
Query: 381 SLYWLRSVVASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIVCFPVPPHADAHASCTAF 202
S W+ A +P LHGP+ P+ SP G+ + HAD +A +A
Sbjct: 354 SFPWIALPSALTVP*RVTSMGALHGPLISISPSLNSPFGITTLLGDEDWHADVNAFRSA* 175
Query: 201 VLS 193
V+S
Sbjct: 174 VIS 166
>ref|NM_111661.2| Arabidopsis thaliana polygalacturonase AT3G07820 mRNA, complete cds
Length = 1400
Score = 327 bits (709), Expect(2) = 1e-098
Identities = 130/289 (44%), Positives = 182/289 (62%)
Frame = +2 / +2
Query: 392 WIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGITLL 571
W+ +D + G G DG+G A W N+C K ++CK LP S+ DF+ N E+ I+ +
Sbjct: 359 WVVFGNIDGFKLNGGGAFDGEGNAAWRVNNCHKTFECKKLPISIRFDFILNSEIRDISSI 538
Query: 572 NSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGP 751
++K FH+N+ K+M + ++ + AP DSPNTDGIH+G S GV I N+ I GDDCIS+G
Sbjct: 539 DAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGVKILNSFISTGDDCISVGD 718
Query: 752 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAYEDAASV 931
G +++ VTCGPGHGIS+GSLGRY E+DV+ I V +CTL++T NG+RIK + AA
Sbjct: 719 GMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTLQETDNGLRIKTWPSAACS 898
Query: 932 LTASKIHYENIKMEDSGYPIIIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAV 1111
TAS IH+E+I ++D PI+ID +YCP C AS + + +++FKNI GTS +AV
Sbjct: 899 TTASDIHFEDIILKDVSNPILIDQEYCPWNQCNKQKASTIKLVNISFKNIRGTSGNKDAV 1078
Query: 1112 NLLCSAKIPCTGVTMDDVNIKYSGTNNKTMAVCKNAKGSAKGCLKELAC 1258
LLCS PC V + D++IKY+G + C N G AC
Sbjct: 1079 KLLCSKGYPCQNVEIGDIDIKYNGADGPATFHCSNVSPKILGSQSPKAC 1225
Score = 162 bits (349), Expect(2) = 9e-042
Identities = 96/237 (40%), Positives = 122/237 (51%)
Frame = -2 / -3
Query: 1140 HGILAEQSRLTASGVEEVPVMFLKVTSLTVTLEAPLAVHNLLGQYFMSMMMG*PESSILI 961
HG QS TAS +VP+MFLK+ + ++A +H GQY SM +G S +I
Sbjct: 1107 HGYPLLQSSFTASLFPDVPLMFLKLMFTNLIVDAFCLLHWFQGQYSWSMRIGLLTSLRII 928
Query: 960 FS*WILEAVSTEAASSYALMRTPLAVFLSVQSLTLISVTSFSSLYRPRLPMLMPWPGPQV 781
S I +AV +AA + L+ PL+V VQ +TL+ +TS S Y PRLP L+P PGP V
Sbjct: 927 SSK*ISDAVVEQAAEGHVLILNPLSVS*RVQLMTLMPLTSCSCPYLPRLPTLIPCPGPHV 748
Query: 780 TPVMFTLEVPGPMEMQSSPTPMTVLVMVTPDESPMWMPSVLGLSPGAVTLTSLISMSLHL 601
T +P P E+QSSP M L ++TP P W+PSVLGLS GA L + M L
Sbjct: 747 TFST*RFFIPSPTEIQSSPVEMKELRILTPSLLPKWIPSVLGLSSGATILMLFMVMFLAP 568
Query: 600 YMFMWKNLELSSVIPDTSPLFTKSITSELGRILQSYFLTQEFLLHTAGPCPSSFPLP 430
MWK L + S KS +G L S L Q L A P PS P P
Sbjct: 567 NTLMWKFLASIEDMSLISEFNMKSNLILMGSFLHSKVL*QLLTLQAALPSPSKAPPP 397
Score = 56.5 bits (117), Expect(2) = 1e-098
Identities = 21/64 (32%), Positives = 38/64 (59%)
Frame = +2 / +2
Query: 191 TDSTKAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCKGDVTIQVNGNLLATTDLS 370
+D T+A+ +A+ SAC + ++IPKG+F +G + GPCK + + + G + A +
Sbjct: 164 SDITQALLKAFTSACQSSSPSKVVIPKGEFKLGEIEMRGPCKAPIEVTLQGTVKADGNAI 343
Query: 371 QYKD 382
Q K+
Sbjct: 344 QGKE 355
Score = 31.3 bits (62), Expect(2) = 9e-042
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = -2 / -3
Query: 381 SLYWLRSVVASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIVCFPVPPHADAHASCTAF 202
S W+ A +P LHGP+ P+ SP G+ + HAD +A +A
Sbjct: 354 SFPWIALPSALTVP*RVTSMGALHGPLISISPSLNSPFGITTLLGDEDWHADVNAFRSA* 175
Query: 201 VLS 193
V+S
Sbjct: 174 VIS 166
>gb|AY087578.1| Arabidopsis thaliana clone 36765 mRNA, complete sequence
Length = 1385
Score = 327 bits (709), Expect(2) = 1e-098
Identities = 130/289 (44%), Positives = 182/289 (62%)
Frame = +2 / +2
Query: 392 WIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGITLL 571
W+ +D + G G DG+G A W N+C K ++CK LP S+ DF+ N E+ I+ +
Sbjct: 359 WVVFGNIDGFKLNGGGAFDGEGNAAWRVNNCHKTFECKKLPISIRFDFILNSEIRDISSI 538
Query: 572 NSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGP 751
++K FH+N+ K+M + ++ + AP DSPNTDGIH+G S GV I N+ I GDDCIS+G
Sbjct: 539 DAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGVKILNSFISTGDDCISVGD 718
Query: 752 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAYEDAASV 931
G +++ VTCGPGHGIS+GSLGRY E+DV+ I V +CTL++T NG+RIK + AA
Sbjct: 719 GMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTLQETDNGLRIKTWPSAACS 898
Query: 932 LTASKIHYENIKMEDSGYPIIIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAV 1111
TAS IH+E+I ++D PI+ID +YCP C AS + + +++FKNI GTS +AV
Sbjct: 899 TTASDIHFEDIILKDVSNPILIDQEYCPWNQCNKQKASTIKLVNISFKNIRGTSGNKDAV 1078
Query: 1112 NLLCSAKIPCTGVTMDDVNIKYSGTNNKTMAVCKNAKGSAKGCLKELAC 1258
LLCS PC V + D++IKY+G + C N G AC
Sbjct: 1079 KLLCSKGYPCQNVEIGDIDIKYNGADGPATFHCSNVSPKILGSQSPKAC 1225
Score = 162 bits (349), Expect(2) = 9e-042
Identities = 96/237 (40%), Positives = 122/237 (51%)
Frame = -2 / -3
Query: 1140 HGILAEQSRLTASGVEEVPVMFLKVTSLTVTLEAPLAVHNLLGQYFMSMMMG*PESSILI 961
HG QS TAS +VP+MFLK+ + ++A +H GQY SM +G S +I
Sbjct: 1107 HGYPLLQSSFTASLFPDVPLMFLKLMFTNLIVDAFCLLHWFQGQYSWSMRIGLLTSLRII 928
Query: 960 FS*WILEAVSTEAASSYALMRTPLAVFLSVQSLTLISVTSFSSLYRPRLPMLMPWPGPQV 781
S I +AV +AA + L+ PL+V VQ +TL+ +TS S Y PRLP L+P PGP V
Sbjct: 927 SSK*ISDAVVEQAAEGHVLILNPLSVS*RVQLMTLMPLTSCSCPYLPRLPTLIPCPGPHV 748
Query: 780 TPVMFTLEVPGPMEMQSSPTPMTVLVMVTPDESPMWMPSVLGLSPGAVTLTSLISMSLHL 601
T +P P E+QSSP M L ++TP P W+PSVLGLS GA L + M L
Sbjct: 747 TFST*RFFIPSPTEIQSSPVEMKELRILTPSLLPKWIPSVLGLSSGATILMLFMVMFLAP 568
Query: 600 YMFMWKNLELSSVIPDTSPLFTKSITSELGRILQSYFLTQEFLLHTAGPCPSSFPLP 430
MWK L + S KS +G L S L Q L A P PS P P
Sbjct: 567 NTLMWKFLASIEDMSLISEFNMKSNLILMGSFLHSKVL*QLLTLQAALPSPSKAPPP 397
Score = 56.5 bits (117), Expect(2) = 1e-098
Identities = 21/64 (32%), Positives = 38/64 (59%)
Frame = +2 / +2
Query: 191 TDSTKAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCKGDVTIQVNGNLLATTDLS 370
+D T+A+ +A+ SAC + ++IPKG+F +G + GPCK + + + G + A +
Sbjct: 164 SDITQALLKAFTSACQSSSPSKVVIPKGEFKLGEIEMRGPCKAPIEVTLQGTVKADGNAI 343
Query: 371 QYKD 382
Q K+
Sbjct: 344 QGKE 355
Score = 31.3 bits (62), Expect(2) = 9e-042
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = -2 / -3
Query: 381 SLYWLRSVVASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIVCFPVPPHADAHASCTAF 202
S W+ A +P LHGP+ P+ SP G+ + HAD +A +A
Sbjct: 354 SFPWIALPSALTVP*RVTSMGALHGPLISISPSLNSPFGITTLLGDEDWHADVNAFRSA* 175
Query: 201 VLS 193
V+S
Sbjct: 174 VIS 166
>gb|AY096534.1| Arabidopsis thaliana putative polygalacturonase (PGA3) (At3g07820)
mRNA, complete cds
Length = 1207
Score = 327 bits (709), Expect(2) = 1e-098
Identities = 130/289 (44%), Positives = 182/289 (62%)
Frame = +2 / +1
Query: 392 WIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGITLL 571
W+ +D + G G DG+G A W N+C K ++CK LP S+ DF+ N E+ I+ +
Sbjct: 292 WVVFGNIDGFKLNGGGAFDGEGNAAWRVNNCHKTFECKKLPISIRFDFILNSEIRDISSI 471
Query: 572 NSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGP 751
++K FH+N+ K+M + ++ + AP DSPNTDGIH+G S GV I N+ I GDDCIS+G
Sbjct: 472 DAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGVKILNSFISTGDDCISVGD 651
Query: 752 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAYEDAASV 931
G +++ VTCGPGHGIS+GSLGRY E+DV+ I V +CTL++T NG+RIK + AA
Sbjct: 652 GMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTLQETDNGLRIKTWPSAACS 831
Query: 932 LTASKIHYENIKMEDSGYPIIIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAV 1111
TAS IH+E+I ++D PI+ID +YCP C AS + + +++FKNI GTS +AV
Sbjct: 832 TTASDIHFEDIILKDVSNPILIDQEYCPWNQCNKQKASTIKLVNISFKNIRGTSGNKDAV 1011
Query: 1112 NLLCSAKIPCTGVTMDDVNIKYSGTNNKTMAVCKNAKGSAKGCLKELAC 1258
LLCS PC V + D++IKY+G + C N G AC
Sbjct: 1012 KLLCSKGYPCQNVEIGDIDIKYNGADGPATFHCSNVSPKILGSQSPKAC 1158
Score = 162 bits (349), Expect(2) = 9e-042
Identities = 96/237 (40%), Positives = 122/237 (51%)
Frame = -2 / -3
Query: 1140 HGILAEQSRLTASGVEEVPVMFLKVTSLTVTLEAPLAVHNLLGQYFMSMMMG*PESSILI 961
HG QS TAS +VP+MFLK+ + ++A +H GQY SM +G S +I
Sbjct: 1040 HGYPLLQSSFTASLFPDVPLMFLKLMFTNLIVDAFCLLHWFQGQYSWSMRIGLLTSLRII 861
Query: 960 FS*WILEAVSTEAASSYALMRTPLAVFLSVQSLTLISVTSFSSLYRPRLPMLMPWPGPQV 781
S I +AV +AA + L+ PL+V VQ +TL+ +TS S Y PRLP L+P PGP V
Sbjct: 860 SSK*ISDAVVEQAAEGHVLILNPLSVS*RVQLMTLMPLTSCSCPYLPRLPTLIPCPGPHV 681
Query: 780 TPVMFTLEVPGPMEMQSSPTPMTVLVMVTPDESPMWMPSVLGLSPGAVTLTSLISMSLHL 601
T +P P E+QSSP M L ++TP P W+PSVLGLS GA L + M L
Sbjct: 680 TFST*RFFIPSPTEIQSSPVEMKELRILTPSLLPKWIPSVLGLSSGATILMLFMVMFLAP 501
Query: 600 YMFMWKNLELSSVIPDTSPLFTKSITSELGRILQSYFLTQEFLLHTAGPCPSSFPLP 430
MWK L + S KS +G L S L Q L A P PS P P
Sbjct: 500 NTLMWKFLASIEDMSLISEFNMKSNLILMGSFLHSKVL*QLLTLQAALPSPSKAPPP 330
Score = 56.5 bits (117), Expect(2) = 1e-098
Identities = 21/64 (32%), Positives = 38/64 (59%)
Frame = +2 / +1
Query: 191 TDSTKAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCKGDVTIQVNGNLLATTDLS 370
+D T+A+ +A+ SAC + ++IPKG+F +G + GPCK + + + G + A +
Sbjct: 97 SDITQALLKAFTSACQSSSPSKVVIPKGEFKLGEIEMRGPCKAPIEVTLQGTVKADGNAI 276
Query: 371 QYKD 382
Q K+
Sbjct: 277 QGKE 288
Score = 31.3 bits (62), Expect(2) = 9e-042
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = -2 / -3
Query: 381 SLYWLRSVVASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIVCFPVPPHADAHASCTAF 202
S W+ A +P LHGP+ P+ SP G+ + HAD +A +A
Sbjct: 287 SFPWIALPSALTVP*RVTSMGALHGPLISISPSLNSPFGITTLLGDEDWHADVNAFRSA* 108
Query: 201 VLS 193
V+S
Sbjct: 107 VIS 99
>emb|AJ005584.1|ATH005584 Arabidopsis thaliana mRNA for polygalacturonase
Length = 1350
Score = 327 bits (708), Expect(2) = 2e-098
Identities = 129/289 (44%), Positives = 182/289 (62%)
Frame = +2 / +2
Query: 392 WIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGITLL 571
W+ +D + G G DG+G A W N+C K ++CK LP S+ DF+ N E+ I+ +
Sbjct: 317 WVVFGNIDGFKLNGGGAFDGEGNAAWRVNNCHKTFECKKLPISIRFDFILNSEIRDISSI 496
Query: 572 NSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGP 751
++K FH+N+ K+M + ++ + AP DSPNTDGIH+G S G+ I N+ I GDDCIS+G
Sbjct: 497 DAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGIKILNSFISTGDDCISVGD 676
Query: 752 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAYEDAASV 931
G +++ VTCGPGHGIS+GSLGRY E+DV+ I V +CTL++T NG+RIK + AA
Sbjct: 677 GMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTLQETDNGLRIKTWPSAACS 856
Query: 932 LTASKIHYENIKMEDSGYPIIIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAV 1111
TAS IH+E+I ++D PI+ID +YCP C AS + + +++FKNI GTS +AV
Sbjct: 857 TTASDIHFEDIILKDVSNPILIDQEYCPWNQCNKQKASTIKLVNISFKNIRGTSGNKDAV 1036
Query: 1112 NLLCSAKIPCTGVTMDDVNIKYSGTNNKTMAVCKNAKGSAKGCLKELAC 1258
LLCS PC V + D++IKY+G + C N G AC
Sbjct: 1037 KLLCSKGYPCQNVEIGDIDIKYNGADGPATFHCSNVSPKILGSQSPKAC 1183
Score = 160 bits (343), Expect(2) = 6e-041
Identities = 95/237 (40%), Positives = 121/237 (51%)
Frame = -2 / -1
Query: 1140 HGILAEQSRLTASGVEEVPVMFLKVTSLTVTLEAPLAVHNLLGQYFMSMMMG*PESSILI 961
HG QS TAS +VP+MFLK+ + ++A +H GQY SM +G S +I
Sbjct: 1065 HGYPLLQSSFTASLFPDVPLMFLKLMFTNLIVDAFCLLHWFQGQYSWSMRIGLLTSLRII 886
Query: 960 FS*WILEAVSTEAASSYALMRTPLAVFLSVQSLTLISVTSFSSLYRPRLPMLMPWPGPQV 781
S I +AV +AA + L+ PL+V VQ +TL+ +TS S Y PRLP L+P PGP V
Sbjct: 885 SSK*ISDAVVEQAAEGHVLILNPLSVS*RVQLMTLMPLTSCSCPYLPRLPTLIPCPGPHV 706
Query: 780 TPVMFTLEVPGPMEMQSSPTPMTVLVMVTPDESPMWMPSVLGLSPGAVTLTSLISMSLHL 601
T +P P E+QSSP M L ++ P P W+PSVLGLS GA L + M L
Sbjct: 705 TFST*RFFIPSPTEIQSSPVEMKELRILIPSLLPKWIPSVLGLSSGATILMLFMVMFLAP 526
Query: 600 YMFMWKNLELSSVIPDTSPLFTKSITSELGRILQSYFLTQEFLLHTAGPCPSSFPLP 430
MWK L + S KS +G L S L Q L A P PS P P
Sbjct: 525 NTLMWKFLASIEDMSLISEFNMKSNLILMGSFLHSKVL*QLLTLQAALPSPSKAPPP 355
Score = 56.5 bits (117), Expect(2) = 2e-098
Identities = 21/64 (32%), Positives = 38/64 (59%)
Frame = +2 / +2
Query: 191 TDSTKAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCKGDVTIQVNGNLLATTDLS 370
+D T+A+ +A+ SAC + ++IPKG+F +G + GPCK + + + G + A +
Sbjct: 122 SDITQALLKAFTSACQSSSPSKVVIPKGEFKLGEIEMRGPCKAPIEVTLQGTVKADGNAI 301
Query: 371 QYKD 382
Q K+
Sbjct: 302 QGKE 313
Score = 31.3 bits (62), Expect(2) = 6e-041
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = -2 / -1
Query: 381 SLYWLRSVVASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIVCFPVPPHADAHASCTAF 202
S W+ A +P LHGP+ P+ SP G+ + HAD +A +A
Sbjct: 312 SFPWIALPSALTVP*RVTSMGALHGPLISISPSLNSPFGITTLLGDEDWHADVNAFRSA* 133
Query: 201 VLS 193
V+S
Sbjct: 132 VIS 124
>emb|X73222.1|ATEGP A.thaliana mRNA for exopolygalacturonase
Length = 1617
Score = 195 bits (421), Expect(4) = 1e-097
Identities = 76/160 (47%), Positives = 102/160 (63%)
Frame = +2 / +2
Query: 434 KGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGITLLNSKFFHMNMYKCKD 613
K DGQG W N C K C LP ++ + N +++ IT NSK FHMN+ CK+
Sbjct: 548 KAIFDGQGSLAWKANDCAKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKN 727
Query: 614 MLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGPGTSKVNITGVTCGP 793
+ + D+++ AP +S NTDGIH+G S+GV + I GDDC+SIG GT + + V CGP
Sbjct: 728 ITLTDISIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGP 907
Query: 794 GHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAY 913
GHGISIGSLGRY +E+ V + V+ C +K T NGVRIK +
Sbjct: 908 GHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGVRIKTW 1027
Score = 120 bits (257), Expect(4) = 2e-040
Identities = 59/118 (50%), Positives = 70/118 (59%)
Frame = -2 / -1
Query: 912 YALMRTPLAVFLSVQSLTLISVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQ 733
+ LMRTPL+VFL LT+ T S Y PRLPM +P PGP T VP PME Q
Sbjct: 1026 HVLMRTPLSVFLMRHFLTVTPFTGCSLGYLPRLPMEIPCPGPHSTFSTMRFSVPSPMETQ 847
Query: 732 SSPTPMTVLVMVTPDESPMWMPSVLGLSPGAVTLTSLISMSLHLYMFMWKNLELSSVI 559
SSP + + +TP + PMW+PSVL LS GA L S+ M L L MFMWK+L VI
Sbjct: 846 SSPVLIFAPIKLTPLDLPMWIPSVLRLSGGASILISVRVMFLQLRMFMWKSLLFVDVI 673
Score = 112 bits (240), Expect(4) = 1e-097
Identities = 45/107 (42%), Positives = 64/107 (59%)
Frame = +2 / +2
Query: 938 ASKIHYENIKMEDSGYPIIIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAVNL 1117
AS I +E+I M++ P++ID +YCP C A SKV + DVT KNI GTS+T AV L
Sbjct: 1049 ASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSKVKLSDVTIKNIKGTSATKVAVKL 1228
Query: 1118 LCSAKIPCTGVTMDDVNIKYSGTNNKTMAVCKNAKGSAKGCLKELAC 1258
+CS +PCT + + D+N+ ++G ++ C N K G L AC
Sbjct: 1229 MCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIKPILSGKLVPAAC 1369
Score = 68.9 bits (144), Expect(4) = 1e-097
Identities = 25/60 (41%), Positives = 36/60 (60%)
Frame = +2 / +2
Query: 254 TILIPKGDFLVGPLNFTGPCKGDVTIQVNGNLLATTDLSQYKDHGNWIEILRVDNLVITG 433
TI +PKG++LV L F GPCKG VT+++NGN A + K H WI+ + + + G
Sbjct: 365 TITVPKGEYLVESLEFKGPCKGPVTLELNGNFKAPATVKTTKPHAGWIDFENLADFTLNG 544
Score = 43.2 bits (88), Expect(4) = 2e-040
Identities = 35/107 (32%), Positives = 45/107 (42%)
Frame = -2 / -1
Query: 1254 ASSLRQPLALPLAFLHTAXXXXXXXXXXXLTSSMVTPVHGILAEQSRLTASGVEEVPVMF 1075
A+ PL + L H L S V G TA+ V +VP+MF
Sbjct: 1365 AAGTNFPLRIGLMLEHAETAGPSLPLWTKLMSERAILVQGTPLLHISFTATFVADVPLMF 1186
Query: 1074 LKVTSLTVTLEAPLAVHNLLGQYFMSMMMG*PESSILIFS*WILEAV 934
L VTS T + A+ GQY SM G SI+I S +LEA+
Sbjct: 1185 LIVTSDNFTFDGTPALQWP*GQYSWSMRTGRLTLSIVISSKRMLEAI 1045
Score = 41.4 bits (84), Expect(4) = 1e-097
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +2 / +2
Query: 143 GGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTI 259
G S D+ GA G+GKTD + A AW AC T+
Sbjct: 260 GASLDVKASGAKGDGKTDDSAAFAAAWKEACAAGSTITV 376
Score = 39.6 bits (80), Expect(4) = 2e-040
Identities = 22/49 (44%), Positives = 25/49 (51%)
Frame = -2 / -1
Query: 399 SIQLP*SLYWLRSVVASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIV 253
SI * L L A +LPF VT PLHGP+ T+ SP G IV
Sbjct: 510 SIHPA*GLVVLTVAGALKLPFNSKVTGPLHGPLNSRLSTKYSPFGTVIV 364
Score = 32.2 bits (64), Expect(4) = 2e-040
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -2 / -1
Query: 231 ADAHASCTAFVLSVLPLPEAPNLVMSKDPP 142
A HA+ A + SVLP P AP+ + S D P
Sbjct: 348 ASFHAAANAALSSVLPSPLAPDALTSSDAP 259
>ref|NM_112258.2| Arabidopsis thaliana polygalacturonase AT3G14040 mRNA, complete cds
Length = 1668
Score = 195 bits (420), Expect(4) = 2e-097
Identities = 76/160 (47%), Positives = 101/160 (63%)
Frame = +2 / +1
Query: 434 KGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGITLLNSKFFHMNMYKCKD 613
K DGQG W N C K C LP ++ + N +++ IT NSK FHMN+ CK+
Sbjct: 580 KAIFDGQGSLAWKANDCAKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKN 759
Query: 614 MLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGPGTSKVNITGVTCGP 793
+ + D+ + AP +S NTDGIH+G S+GV + I GDDC+SIG GT + + V CGP
Sbjct: 760 ITLTDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGP 939
Query: 794 GHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAY 913
GHGISIGSLGRY +E+ V + V+ C +K T NGVRIK +
Sbjct: 940 GHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGVRIKTW 1059
Score = 117 bits (250), Expect(4) = 2e-039
Identities = 58/118 (49%), Positives = 69/118 (58%)
Frame = -2 / -2
Query: 912 YALMRTPLAVFLSVQSLTLISVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQ 733
+ LMRTPL+VFL LT+ T S Y PRLPM +P PGP T VP PME Q
Sbjct: 1058 HVLMRTPLSVFLMRHFLTVTPFTGCSLGYLPRLPMEIPCPGPHSTFSTMRFSVPSPMETQ 879
Query: 732 SSPTPMTVLVMVTPDESPMWMPSVLGLSPGAVTLTSLISMSLHLYMFMWKNLELSSVI 559
SSP + + +TP + PMW+PSVL LS GA S+ M L L MFMWK+L VI
Sbjct: 878 SSPVLIFAPIKLTPLDLPMWIPSVLRLSGGASIPISVRVMFLQLRMFMWKSLLFVDVI 705
Score = 112 bits (240), Expect(4) = 2e-097
Identities = 45/107 (42%), Positives = 64/107 (59%)
Frame = +2 / +1
Query: 938 ASKIHYENIKMEDSGYPIIIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAVNL 1117
AS I +E+I M++ P++ID +YCP C A SKV + DVT KNI GTS+T AV L
Sbjct: 1081 ASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSKVKLSDVTIKNIKGTSATKVAVKL 1260
Query: 1118 LCSAKIPCTGVTMDDVNIKYSGTNNKTMAVCKNAKGSAKGCLKELAC 1258
+CS +PCT + + D+N+ ++G ++ C N K G L AC
Sbjct: 1261 MCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIKPILSGKLVPAAC 1401
Score = 68.9 bits (144), Expect(4) = 2e-097
Identities = 25/60 (41%), Positives = 36/60 (60%)
Frame = +2 / +1
Query: 254 TILIPKGDFLVGPLNFTGPCKGDVTIQVNGNLLATTDLSQYKDHGNWIEILRVDNLVITG 433
TI +PKG++LV L F GPCKG VT+++NGN A + K H WI+ + + + G
Sbjct: 397 TITVPKGEYLVESLEFKGPCKGPVTLELNGNFKAPATVKTTKPHAGWIDFENLADFTLNG 576
Score = 43.2 bits (88), Expect(4) = 2e-039
Identities = 35/107 (32%), Positives = 45/107 (42%)
Frame = -2 / -2
Query: 1254 ASSLRQPLALPLAFLHTAXXXXXXXXXXXLTSSMVTPVHGILAEQSRLTASGVEEVPVMF 1075
A+ PL + L H L S V G TA+ V +VP+MF
Sbjct: 1397 AAGTNFPLRIGLMLEHAETAGPSLPLWTKLMSERAILVQGTPLLHISFTATFVADVPLMF 1218
Query: 1074 LKVTSLTVTLEAPLAVHNLLGQYFMSMMMG*PESSILIFS*WILEAV 934
L VTS T + A+ GQY SM G SI+I S +LEA+
Sbjct: 1217 LIVTSDNFTFDGTPALQWP*GQYSWSMRTGRLTLSIVISSKRMLEAI 1077
Score = 41.4 bits (84), Expect(4) = 2e-097
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +2 / +1
Query: 143 GGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTI 259
G S D+ GA G+GKTD + A AW AC T+
Sbjct: 292 GASLDVKASGAKGDGKTDDSAAFAAAWKEACAAGSTITV 408
Score = 39.6 bits (80), Expect(4) = 2e-039
Identities = 22/49 (44%), Positives = 25/49 (51%)
Frame = -2 / -2
Query: 399 SIQLP*SLYWLRSVVASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIV 253
SI * L L A +LPF VT PLHGP+ T+ SP G IV
Sbjct: 542 SIHPA*GLVVLTVAGALKLPFNSKVTGPLHGPLNSRLSTKYSPFGTVIV 396
Score = 32.2 bits (64), Expect(4) = 2e-039
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -2 / -2
Query: 231 ADAHASCTAFVLSVLPLPEAPNLVMSKDPP 142
A HA+ A + SVLP P AP+ + S D P
Sbjct: 380 ASFHAAANAALSSVLPSPLAPDALTSSDAP 291
>emb|BX823174.1|CNS0A74O Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB95ZD09 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1329
Score = 323 bits (699), Expect(2) = 3e-097
Identities = 128/289 (44%), Positives = 181/289 (62%)
Frame = +2 / +2
Query: 392 WIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGITLL 571
W+ ++ + G G DG+G A W N+C K ++CK LP S+ DF+ N E+ I+ +
Sbjct: 344 WVVFGNINGFKLNGGGAFDGEGNAAWRVNNCHKTFECKKLPISIRFDFILNSEIRDISSI 523
Query: 572 NSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGP 751
++K FH+N+ K+M + ++ + AP DSPNTDGIH+G S GV I N+ I GDDCIS+G
Sbjct: 524 DAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGVKILNSFISTGDDCISVGD 703
Query: 752 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAYEDAASV 931
G +++ VTCGPGHGIS+GSLGRY E+DV+ I V +CTL++T NG+RIK + AA
Sbjct: 704 GMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTLQETDNGLRIKTWPSAACS 883
Query: 932 LTASKIHYENIKMEDSGYPIIIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAV 1111
TAS IH+E+I ++D PI+ID +YCP C AS + + +++FKNI GT +AV
Sbjct: 884 TTASDIHFEDIILKDVSNPILIDQEYCPWNQCNKQKASTIKLVNISFKNIRGTPGNKDAV 1063
Query: 1112 NLLCSAKIPCTGVTMDDVNIKYSGTNNKTMAVCKNAKGSAKGCLKELAC 1258
LLCS PC V + D++IKY+G + C N G AC
Sbjct: 1064 KLLCSKGYPCQNVEIGDIDIKYNGADGPATFHCSNVSPKILGSQSPKAC 1210
Score = 160 bits (345), Expect(2) = 3e-041
Identities = 96/237 (40%), Positives = 121/237 (51%)
Frame = -2 / -1
Query: 1140 HGILAEQSRLTASGVEEVPVMFLKVTSLTVTLEAPLAVHNLLGQYFMSMMMG*PESSILI 961
HG QS TAS VP+MFLK+ + ++A +H GQY SM +G S +I
Sbjct: 1092 HGYPLLQSSFTASLFPGVPLMFLKLMFTNLIVDAFCLLHWFQGQYSWSMRIGLLTSLRII 913
Query: 960 FS*WILEAVSTEAASSYALMRTPLAVFLSVQSLTLISVTSFSSLYRPRLPMLMPWPGPQV 781
S I +AV +AA + L+ PL+V VQ +TL+ +TS S Y PRLP L+P PGP V
Sbjct: 912 SSK*ISDAVVEQAAEGHVLILNPLSVS*RVQLMTLMPLTSCSCPYLPRLPTLIPCPGPHV 733
Query: 780 TPVMFTLEVPGPMEMQSSPTPMTVLVMVTPDESPMWMPSVLGLSPGAVTLTSLISMSLHL 601
T +P P E+QSSP M L ++TP P W+PSVLGLS GA L + M L
Sbjct: 732 TFST*RFFIPSPTEIQSSPVEMKELRILTPSLLPKWIPSVLGLSSGATILMLFMVMFLAP 553
Query: 600 YMFMWKNLELSSVIPDTSPLFTKSITSELGRILQSYFLTQEFLLHTAGPCPSSFPLP 430
MWK L + S KS +G L S L Q L A P PS P P
Sbjct: 552 NTLMWKFLASIEDMSLISEFNMKSNLILMGSFLHSKVL*QLLTLQAALPSPSKAPPP 382
Score = 56.5 bits (117), Expect(2) = 3e-097
Identities = 21/64 (32%), Positives = 38/64 (59%)
Frame = +2 / +2
Query: 191 TDSTKAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCKGDVTIQVNGNLLATTDLS 370
+D T+A+ +A+ SAC + ++IPKG+F +G + GPCK + + + G + A +
Sbjct: 149 SDITQALLKAFTSACQSSSPSKVVIPKGEFKLGEIEMRGPCKAPIEVTLQGTVKADGNAI 328
Query: 371 QYKD 382
Q K+
Sbjct: 329 QGKE 340
Score = 31.3 bits (62), Expect(2) = 3e-041
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = -2 / -1
Query: 381 SLYWLRSVVASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIVCFPVPPHADAHASCTAF 202
S W+ A +P LHGP+ P+ SP G+ + HAD +A +A
Sbjct: 339 SFPWIALPSALTVP*RVTSMGALHGPLISISPSLNSPFGITTLLGDEDWHADVNAFRSA* 160
Query: 201 VLS 193
V+S
Sbjct: 159 VIS 151
>emb|X72292.1|ATEXOPB A.thaliana (clone GBGa483) mRNA for exopolygalacturonase
Length = 1652
Score = 195 bits (421), Expect(4) = 1e-096
Identities = 76/160 (47%), Positives = 101/160 (63%)
Frame = +2 / +2
Query: 434 KGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGITLLNSKFFHMNMYKCKD 613
K DGQG W N C K C LP ++ + N +++ IT NSK FHMN+ CK+
Sbjct: 539 KAIFDGQGSLAWKANDCAKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKN 718
Query: 614 MLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGPGTSKVNITGVTCGP 793
+ + D+ + AP +S NTDGIH+G S+GV + I GDDC+SIG GT + + V CGP
Sbjct: 719 ITLSDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGP 898
Query: 794 GHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAY 913
GHGISIGSLGRY +E+ V + V+ C +K T NGVRIK +
Sbjct: 899 GHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGVRIKTW 1018
Score = 115 bits (246), Expect(4) = 1e-035
Identities = 58/118 (49%), Positives = 68/118 (57%)
Frame = -2 / -3
Query: 912 YALMRTPLAVFLSVQSLTLISVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQ 733
+ LMRTPL+VFL LT+ T S Y PRLPM +P PGP T VP PME Q
Sbjct: 1017 HVLMRTPLSVFLMRHFLTVTPFTGCSLGYLPRLPMEIPCPGPHSTFSTMRFSVPSPMETQ 838
Query: 732 SSPTPMTVLVMVTPDESPMWMPSVLGLSPGAVTLTSLISMSLHLYMFMWKNLELSSVI 559
SSP + + +TP + PMW+PSVL LS GA S M L L MFMWK+L VI
Sbjct: 837 SSPVLIFAPIKLTPLDLPMWIPSVLRLSGGASIPISERVMFLQLRMFMWKSLLFVDVI 664
Score = 108 bits (230), Expect(4) = 1e-096
Identities = 43/107 (40%), Positives = 63/107 (58%)
Frame = +2 / +2
Query: 938 ASKIHYENIKMEDSGYPIIIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAVNL 1117
AS I +E+I M++ P++ID +YCP C A S+V + DVT K I GTS+T AV L
Sbjct: 1040 ASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSQVKLSDVTIKGIKGTSATKVAVKL 1219
Query: 1118 LCSAKIPCTGVTMDDVNIKYSGTNNKTMAVCKNAKGSAKGCLKELAC 1258
+CS +PCT + + D+N+ ++G ++ C N K G L AC
Sbjct: 1220 MCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIKPILSGKLVPAAC 1360
Score = 68.9 bits (144), Expect(4) = 1e-096
Identities = 24/60 (40%), Positives = 36/60 (60%)
Frame = +2 / +2
Query: 254 TILIPKGDFLVGPLNFTGPCKGDVTIQVNGNLLATTDLSQYKDHGNWIEILRVDNLVITG 433
TI +PKG+++V L F GPCKG VT+++NGN A + K H WI+ + + + G
Sbjct: 356 TITVPKGEYMVESLEFKGPCKGPVTLELNGNFKAPATVKTTKPHAGWIDFENIADFTLNG 535
Score = 42.8 bits (87), Expect(4) = 1e-096
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +2 / +2
Query: 140 PGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTI 259
PG + D+ GA G+GKTD + A AW AC T+
Sbjct: 248 PGAAVDVKASGAKGDGKTDDSAAFAAAWKEACAAGSTITV 367
Score = 37.3 bits (75), Expect(4) = 1e-035
Identities = 34/107 (31%), Positives = 44/107 (41%)
Frame = -2 / -3
Query: 1254 ASSLRQPLALPLAFLHTAXXXXXXXXXXXLTSSMVTPVHGILAEQSRLTASGVEEVPVMF 1075
A+ PL + L H L S V G TA+ V +VP+M
Sbjct: 1356 AAGTNFPLRIGLMLEHAETAGPSLPLWTKLMSERAILVQGTPLLHISFTATFVADVPLMP 1177
Query: 1074 LKVTSLTVTLEAPLAVHNLLGQYFMSMMMG*PESSILIFS*WILEAV 934
L VTS T + A+ GQY SM G SI+I S +LEA+
Sbjct: 1176 LIVTSDNFTCDGTPALQWP*GQYSWSMRTGRLTLSIVISSKRMLEAM 1036
Score = 35.9 bits (72), Expect(4) = 1e-035
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = -2 / -3
Query: 354 ASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIV 253
A +LPF VT PLHGP+ T SP G IV
Sbjct: 456 ALKLPFNSKVTGPLHGPLNSRLSTIYSPFGTVIV 355
Score = 30.9 bits (61), Expect(4) = 1e-035
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -2 / -3
Query: 231 ADAHASCTAFVLSVLPLPEAPNLVMSKDPPG 139
A HA+ A + SVLP P AP+ + S PG
Sbjct: 339 ASFHAAANAALSSVLPSPLAPDALTSTAAPG 247
>gb|AY056173.1| Arabidopsis thaliana putative exopolygalacturonase (At3g07850) mRNA,
complete cds
Length = 1705
Score = 195 bits (421), Expect(4) = 7e-096
Identities = 76/160 (47%), Positives = 101/160 (63%)
Frame = +2 / +3
Query: 434 KGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGITLLNSKFFHMNMYKCKD 613
K DGQG W N C K C LP ++ + N +++ IT NSK FHMN+ CK+
Sbjct: 576 KAIFDGQGSLAWKANDCAKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKN 755
Query: 614 MLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGPGTSKVNITGVTCGP 793
+ + D+ + AP +S NTDGIH+G S+GV + I GDDC+SIG GT + + V CGP
Sbjct: 756 ITLSDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGP 935
Query: 794 GHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAY 913
GHGISIGSLGRY +E+ V + V+ C +K T NGVRIK +
Sbjct: 936 GHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGVRIKTW 1055
Score = 115 bits (246), Expect(4) = 3e-034
Identities = 58/118 (49%), Positives = 68/118 (57%)
Frame = -2 / -1
Query: 912 YALMRTPLAVFLSVQSLTLISVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQ 733
+ LMRTPL+VFL LT+ T S Y PRLPM +P PGP T VP PME Q
Sbjct: 1054 HVLMRTPLSVFLMRHFLTVTPFTGCSLGYLPRLPMEIPCPGPHSTFSTMRFSVPSPMETQ 875
Query: 732 SSPTPMTVLVMVTPDESPMWMPSVLGLSPGAVTLTSLISMSLHLYMFMWKNLELSSVI 559
SSP + + +TP + PMW+PSVL LS GA S M L L MFMWK+L VI
Sbjct: 874 SSPVLIFAPIKLTPLDLPMWIPSVLRLSGGASIPISERVMFLQLRMFMWKSLLFVDVI 701
Score = 108 bits (230), Expect(4) = 7e-096
Identities = 43/107 (40%), Positives = 63/107 (58%)
Frame = +2 / +3
Query: 938 ASKIHYENIKMEDSGYPIIIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAVNL 1117
AS I +E+I M++ P++ID +YCP C A S+V + DVT K I GTS+T AV L
Sbjct: 1077 ASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSQVKLSDVTIKGIKGTSATKVAVKL 1256
Query: 1118 LCSAKIPCTGVTMDDVNIKYSGTNNKTMAVCKNAKGSAKGCLKELAC 1258
+CS +PCT + + D+N+ ++G ++ C N K G L AC
Sbjct: 1257 MCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIKPILSGKLVPAAC 1397
Score = 68.9 bits (144), Expect(4) = 7e-096
Identities = 24/60 (40%), Positives = 36/60 (60%)
Frame = +2 / +3
Query: 254 TILIPKGDFLVGPLNFTGPCKGDVTIQVNGNLLATTDLSQYKDHGNWIEILRVDNLVITG 433
TI +PKG+++V L F GPCKG VT+++NGN A + K H WI+ + + + G
Sbjct: 393 TITVPKGEYMVESLEFKGPCKGPVTLELNGNFKAPATVKTTKPHAGWIDFENIADFTLNG 572
Score = 40.0 bits (81), Expect(4) = 7e-096
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +2 / +3
Query: 140 PGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTI 259
PG + D+ GA G+ KTD + A AW AC T+
Sbjct: 285 PGAAVDVKASGAKGDSKTDDSAAFAAAWKEACAAGSTITV 404
Score = 37.3 bits (75), Expect(4) = 3e-034
Identities = 34/107 (31%), Positives = 44/107 (41%)
Frame = -2 / -1
Query: 1254 ASSLRQPLALPLAFLHTAXXXXXXXXXXXLTSSMVTPVHGILAEQSRLTASGVEEVPVMF 1075
A+ PL + L H L S V G TA+ V +VP+M
Sbjct: 1393 AAGTNFPLRIGLMLEHAETAGPSLPLWTKLMSERAILVQGTPLLHISFTATFVADVPLMP 1214
Query: 1074 LKVTSLTVTLEAPLAVHNLLGQYFMSMMMG*PESSILIFS*WILEAV 934
L VTS T + A+ GQY SM G SI+I S +LEA+
Sbjct: 1213 LIVTSDNFTCDGTPALQWP*GQYSWSMRTGRLTLSIVISSKRMLEAM 1073
Score = 35.9 bits (72), Expect(4) = 3e-034
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = -2 / -1
Query: 354 ASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIV 253
A +LPF VT PLHGP+ T SP G IV
Sbjct: 493 ALKLPFNSKVTGPLHGPLNSRLSTIYSPFGTVIV 392
Score = 26.3 bits (51), Expect(4) = 3e-034
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2 / -1
Query: 231 ADAHASCTAFVLSVLPLPEAPNLVMSKDPPG 139
A HA+ A + SVL P AP+ + S PG
Sbjct: 376 ASFHAAANAALSSVLLSPLAPDALTSTAAPG 284
>ref|NM_111664.1| Arabidopsis thaliana polygalacturonase AT3G07850 mRNA, complete cds
Length = 1690
Score = 195 bits (421), Expect(4) = 7e-096
Identities = 76/160 (47%), Positives = 101/160 (63%)
Frame = +2 / +3
Query: 434 KGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGITLLNSKFFHMNMYKCKD 613
K DGQG W N C K C LP ++ + N +++ IT NSK FHMN+ CK+
Sbjct: 576 KAIFDGQGSLAWKANDCAKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKN 755
Query: 614 MLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGPGTSKVNITGVTCGP 793
+ + D+ + AP +S NTDGIH+G S+GV + I GDDC+SIG GT + + V CGP
Sbjct: 756 ITLSDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGP 935
Query: 794 GHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAY 913
GHGISIGSLGRY +E+ V + V+ C +K T NGVRIK +
Sbjct: 936 GHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGVRIKTW 1055
Score = 115 bits (246), Expect(4) = 3e-034
Identities = 58/118 (49%), Positives = 68/118 (57%)
Frame = -2 / -1
Query: 912 YALMRTPLAVFLSVQSLTLISVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQ 733
+ LMRTPL+VFL LT+ T S Y PRLPM +P PGP T VP PME Q
Sbjct: 1054 HVLMRTPLSVFLMRHFLTVTPFTGCSLGYLPRLPMEIPCPGPHSTFSTMRFSVPSPMETQ 875
Query: 732 SSPTPMTVLVMVTPDESPMWMPSVLGLSPGAVTLTSLISMSLHLYMFMWKNLELSSVI 559
SSP + + +TP + PMW+PSVL LS GA S M L L MFMWK+L VI
Sbjct: 874 SSPVLIFAPIKLTPLDLPMWIPSVLRLSGGASIPISERVMFLQLRMFMWKSLLFVDVI 701
Score = 108 bits (230), Expect(4) = 7e-096
Identities = 43/107 (40%), Positives = 63/107 (58%)
Frame = +2 / +3
Query: 938 ASKIHYENIKMEDSGYPIIIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAVNL 1117
AS I +E+I M++ P++ID +YCP C A S+V + DVT K I GTS+T AV L
Sbjct: 1077 ASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSQVKLSDVTIKGIKGTSATKVAVKL 1256
Query: 1118 LCSAKIPCTGVTMDDVNIKYSGTNNKTMAVCKNAKGSAKGCLKELAC 1258
+CS +PCT + + D+N+ ++G ++ C N K G L AC
Sbjct: 1257 MCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIKPILSGKLVPAAC 1397
Score = 68.9 bits (144), Expect(4) = 7e-096
Identities = 24/60 (40%), Positives = 36/60 (60%)
Frame = +2 / +3
Query: 254 TILIPKGDFLVGPLNFTGPCKGDVTIQVNGNLLATTDLSQYKDHGNWIEILRVDNLVITG 433
TI +PKG+++V L F GPCKG VT+++NGN A + K H WI+ + + + G
Sbjct: 393 TITVPKGEYMVESLEFKGPCKGPVTLELNGNFKAPATVKTTKPHAGWIDFENIADFTLNG 572
Score = 40.0 bits (81), Expect(4) = 7e-096
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +2 / +3
Query: 140 PGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTI 259
PG + D+ GA G+ KTD + A AW AC T+
Sbjct: 285 PGAAVDVKASGAKGDSKTDDSAAFAAAWKEACAAGSTITV 404
Score = 37.3 bits (75), Expect(4) = 3e-034
Identities = 34/107 (31%), Positives = 44/107 (41%)
Frame = -2 / -1
Query: 1254 ASSLRQPLALPLAFLHTAXXXXXXXXXXXLTSSMVTPVHGILAEQSRLTASGVEEVPVMF 1075
A+ PL + L H L S V G TA+ V +VP+M
Sbjct: 1393 AAGTNFPLRIGLMLEHAETAGPSLPLWTKLMSERAILVQGTPLLHISFTATFVADVPLMP 1214
Query: 1074 LKVTSLTVTLEAPLAVHNLLGQYFMSMMMG*PESSILIFS*WILEAV 934
L VTS T + A+ GQY SM G SI+I S +LEA+
Sbjct: 1213 LIVTSDNFTCDGTPALQWP*GQYSWSMRTGRLTLSIVISSKRMLEAM 1073
Score = 35.9 bits (72), Expect(4) = 3e-034
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = -2 / -1
Query: 354 ASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIV 253
A +LPF VT PLHGP+ T SP G IV
Sbjct: 493 ALKLPFNSKVTGPLHGPLNSRLSTIYSPFGTVIV 392
Score = 26.3 bits (51), Expect(4) = 3e-034
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2 / -1
Query: 231 ADAHASCTAFVLSVLPLPEAPNLVMSKDPPG 139
A HA+ A + SVL P AP+ + S PG
Sbjct: 376 ASFHAAANAALSSVLLSPLAPDALTSTAAPG 284
>gb|AY091200.1| Arabidopsis thaliana putative exopolygalacturonase (At3g07850)
mRNA, complete cds
Length = 1366
Score = 195 bits (421), Expect(4) = 7e-096
Identities = 76/160 (47%), Positives = 101/160 (63%)
Frame = +2 / +1
Query: 434 KGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGITLLNSKFFHMNMYKCKD 613
K DGQG W N C K C LP ++ + N +++ IT NSK FHMN+ CK+
Sbjct: 487 KAIFDGQGSLAWKANDCAKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKN 666
Query: 614 MLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGPGTSKVNITGVTCGP 793
+ + D+ + AP +S NTDGIH+G S+GV + I GDDC+SIG GT + + V CGP
Sbjct: 667 ITLSDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGP 846
Query: 794 GHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAY 913
GHGISIGSLGRY +E+ V + V+ C +K T NGVRIK +
Sbjct: 847 GHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGVRIKTW 966
Score = 115 bits (246), Expect(4) = 2e-034
Identities = 58/118 (49%), Positives = 68/118 (57%)
Frame = -2 / -3
Query: 912 YALMRTPLAVFLSVQSLTLISVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQ 733
+ LMRTPL+VFL LT+ T S Y PRLPM +P PGP T VP PME Q
Sbjct: 965 HVLMRTPLSVFLMRHFLTVTPFTGCSLGYLPRLPMEIPCPGPHSTFSTMRFSVPSPMETQ 786
Query: 732 SSPTPMTVLVMVTPDESPMWMPSVLGLSPGAVTLTSLISMSLHLYMFMWKNLELSSVI 559
SSP + + +TP + PMW+PSVL LS GA S M L L MFMWK+L VI
Sbjct: 785 SSPVLIFAPIKLTPLDLPMWIPSVLRLSGGASIPISERVMFLQLRMFMWKSLLFVDVI 612
Score = 108 bits (230), Expect(4) = 7e-096
Identities = 43/107 (40%), Positives = 63/107 (58%)
Frame = +2 / +1
Query: 938 ASKIHYENIKMEDSGYPIIIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAVNL 1117
AS I +E+I M++ P++ID +YCP C A S+V + DVT K I GTS+T AV L
Sbjct: 988 ASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSQVKLSDVTIKGIKGTSATKVAVKL 1167
Query: 1118 LCSAKIPCTGVTMDDVNIKYSGTNNKTMAVCKNAKGSAKGCLKELAC 1258
+CS +PCT + + D+N+ ++G ++ C N K G L AC
Sbjct: 1168 MCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIKPILSGKLVPAAC 1308
Score = 68.9 bits (144), Expect(4) = 7e-096
Identities = 24/60 (40%), Positives = 36/60 (60%)
Frame = +2 / +1
Query: 254 TILIPKGDFLVGPLNFTGPCKGDVTIQVNGNLLATTDLSQYKDHGNWIEILRVDNLVITG 433
TI +PKG+++V L F GPCKG VT+++NGN A + K H WI+ + + + G
Sbjct: 304 TITVPKGEYMVESLEFKGPCKGPVTLELNGNFKAPATVKTTKPHAGWIDFENIADFTLNG 483
Score = 40.0 bits (81), Expect(4) = 7e-096
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +2 / +1
Query: 140 PGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTI 259
PG + D+ GA G+ KTD + A AW AC T+
Sbjct: 196 PGAAVDVKASGAKGDSKTDDSAAFAAAWKEACAAGSTITV 315
Score = 37.3 bits (75), Expect(4) = 2e-034
Identities = 34/107 (31%), Positives = 44/107 (41%)
Frame = -2 / -3
Query: 1254 ASSLRQPLALPLAFLHTAXXXXXXXXXXXLTSSMVTPVHGILAEQSRLTASGVEEVPVMF 1075
A+ PL + L H L S V G TA+ V +VP+M
Sbjct: 1304 AAGTNFPLRIGLMLEHAETAGPSLPLWTKLMSERAILVQGTPLLHISFTATFVADVPLMP 1125
Query: 1074 LKVTSLTVTLEAPLAVHNLLGQYFMSMMMG*PESSILIFS*WILEAV 934
L VTS T + A+ GQY SM G SI+I S +LEA+
Sbjct: 1124 LIVTSDNFTCDGTPALQWP*GQYSWSMRTGRLTLSIVISSKRMLEAM 984
Score = 35.9 bits (72), Expect(4) = 2e-034
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = -2 / -3
Query: 354 ASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIV 253
A +LPF VT PLHGP+ T SP G IV
Sbjct: 404 ALKLPFNSKVTGPLHGPLNSRLSTIYSPFGTVIV 303
Score = 26.3 bits (51), Expect(4) = 2e-034
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2 / -3
Query: 231 ADAHASCTAFVLSVLPLPEAPNLVMSKDPPG 139
A HA+ A + SVL P AP+ + S PG
Sbjct: 287 ASFHAAANAALSSVLLSPLAPDALTSTAAPG 195
>gb|AY089015.1| Arabidopsis thaliana clone 16377 mRNA, complete sequence
Length = 1462
Score = 324 bits (701), Expect(2) = 9e-096
Identities = 128/289 (44%), Positives = 180/289 (62%)
Frame = +2 / +2
Query: 392 WIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGITLL 571
W+ ++ + G G DG+G A W N+C K ++CK LP S+ DFV + ++ GIT L
Sbjct: 404 WVAFRNINGFKLNGGGVFDGEGNAAWRVNNCHKTFNCKKLPISIRFDFVTDAKIRGITSL 583
Query: 572 NSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGP 751
++K FH+N+ K+M +DV + AP +SPNTDGIH+G S G+ I N+ I GDDC+S+G
Sbjct: 584 DAKHFHINVIGAKNMTFEDVKIIAPAESPNTDGIHVGRSDGIKIINSFISTGDDCVSVGD 763
Query: 752 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAYEDAASV 931
G + + VTCGPGHGISIGSLGRY E++V+ I + +CTL++T NG+RIK + AA
Sbjct: 764 GMKNLLVERVTCGPGHGISIGSLGRYSHEENVSGIKIINCTLQETDNGLRIKTWPSAACT 943
Query: 932 LTASKIHYENIKMEDSGYPIIIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAV 1111
TAS IH+ENI +++ PI+ID +YCP C S + + +++FK I GTS +AV
Sbjct: 944 TTASDIHFENILLKNVSNPILIDQEYCPWNQCNKQKPSTIKLANISFKKIRGTSGNKDAV 1123
Query: 1112 NLLCSAKIPCTGVTMDDVNIKYSGTNNKTMAVCKNAKGSAKGCLKELAC 1258
LLCS PC V + DVNI+Y+G + C N G AC
Sbjct: 1124 KLLCSKGYPCQNVEVGDVNIQYTGADGPATFQCSNVSPKLVGTQIPKAC 1270
Score = 142 bits (305), Expect(4) = 8e-046
Identities = 75/178 (42%), Positives = 94/178 (52%)
Frame = -2 / -2
Query: 963 IFS*WILEAVSTEAASSYALMRTPLAVFLSVQSLTLISVTSFSSLYRPRLPMLMPWPGPQ 784
+FS WI EAV +AA + L+ PL+V VQ + L+ +T S LY PRLP+L+P PGP
Sbjct: 975 MFSKWISEAVVVQAAEGHVLILRPLSVSWRVQLMILMPLTFSSWLYLPRLPILIPCPGPH 796
Query: 783 VTPVMFTLEVPGPMEMQSSPTPMTVLVMVTPDESPMWMPSVLGLSPGAVTLTSLISMSLH 604
VT +P P E QSSP + L+++ P P W+PSVLGLS GA+ LTS M
Sbjct: 795 VTLSTRRFFIPSPTETQSSPVEINELMILIPSLLPTWIPSVLGLSAGAMILTSSNVMFFA 616
Query: 603 LYMFMWKNLELSSVIPDTSPLFTKSITSELGRILQSYFLTQEFLLHTAGPCPSSFPLP 430
MWK V+P TKS +G LQ L Q L A P PS P P
Sbjct: 615 PMTLMWKCFASKEVMPLIFASVTKSNLMLMGSFLQLKVLWQLLTLQAAFPSPSKTPPP 442
Score = 50.6 bits (104), Expect(2) = 9e-096
Identities = 20/55 (36%), Positives = 33/55 (60%)
Frame = +2 / +2
Query: 191 TDSTKAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCKGDVTIQVNGNLLA 355
+D T A+ +A+ AC K T++IPKG++ +G + GPCK + I + G + A
Sbjct: 212 SDITNALLKAFNEACQFPTKSTVMIPKGEYKLGEIVMMGPCKAPIRIALLGTVKA 376
Score = 36.8 bits (74), Expect(4) = 8e-046
Identities = 21/60 (35%), Positives = 29/60 (48%)
Frame = -2 / -2
Query: 1164 TSSMVTPVHGILAEQSRLTASGVEEVPVMFLKVTSLTVTLEAPLAVHNLLGQYFMSMMMG 985
TS T HG TAS +VP++FLK+ + ++ +H GQY SM MG
Sbjct: 1176 TSPTSTF*HGYPLLHKSFTASLFPDVPLIFLKLILANLIVDGFCLLHWFHGQYSWSMRMG 997
Score = 32.7 bits (65), Expect(4) = 8e-046
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = -2 / -2
Query: 354 ASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIVCFPVPPHADAHASCTAFVLS 193
A +P ++ LHGP+ P+ SP G+ V F HA +A A V+S
Sbjct: 375 AFTVPRRAILIGALHGPIITISPSLYSPFGIITVLFVGNWHASLNAFNNALVIS 214
Score = 31.8 bits (63), Expect(4) = 8e-046
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = -1 / -1
Query: 1012 AVLHVDDDGVARVLHLDILIVDL 944
AVL VD+DGVA VL D+L +D+
Sbjct: 1024 AVLLVDEDGVADVLEEDVLEMDI 956
>ref|NM_111662.2| Arabidopsis thaliana polygalacturonase AT3G07830 mRNA, complete cds
Length = 1460
Score = 321 bits (695), Expect(2) = 1e-095
Identities = 127/289 (43%), Positives = 181/289 (62%)
Frame = +2 / +2
Query: 392 WIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGITLL 571
W+ R+D + G G DG+G A W N+C K ++CK LP S+ DFV N E+ I+ +
Sbjct: 350 WVVFQRMDGFRLNGGGTFDGEGNAAWRVNNCHKTFECKKLPISIRFDFVTNAEIRDISSI 529
Query: 572 NSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGP 751
++K FH+N+ K+M +V + AP +SPNTDGIH+G S GV+I N+ I GDDC+S+G
Sbjct: 530 DAKNFHINVIGAKNMTFDNVKIMAPAESPNTDGIHLGRSVGVSIINSRISTGDDCVSVGD 709
Query: 752 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAYEDAASV 931
G + + V CGPGHGIS+GSLGRY E+DV+ I V +CTL++T NG+RIK + AA
Sbjct: 710 GMVNLLVKNVVCGPGHGISVGSLGRYGHEQDVSGIRVINCTLQETDNGLRIKTWPSAACS 889
Query: 932 LTASKIHYENIKMEDSGYPIIIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAV 1111
TAS IH+ENI + + PI+ID +YCP C +S + + +++F+ I GTS +AV
Sbjct: 890 TTASNIHFENIILRNVSNPILIDQEYCPWNQCNKQKSSSIKLANISFRRIRGTSGNKDAV 1069
Query: 1112 NLLCSAKIPCTGVTMDDVNIKYSGTNNKTMAVCKNAKGSAKGCLKELAC 1258
LLCS PC V + D+NI+Y+G + +C N + G AC
Sbjct: 1070 KLLCSKGYPCENVQVGDINIQYTGADGPATFMCSNVRPKLVGTQFPKAC 1216
Score = 153 bits (328), Expect(2) = 1e-037
Identities = 93/237 (39%), Positives = 119/237 (50%)
Frame = -2 / -3
Query: 1140 HGILAEQSRLTASGVEEVPVMFLKVTSLTVTLEAPLAVHNLLGQYFMSMMMG*PESSILI 961
HG + TAS +VP++ LK+ ++ + +H GQY SM +G +I
Sbjct: 1098 HGYPLLHNSFTASLFPDVPLILLKLMFASLMDDDFCLLHWFQGQYSWSMRIGLLTFLRMI 919
Query: 960 FS*WILEAVSTEAASSYALMRTPLAVFLSVQSLTLISVTSFSSLYRPRLPMLMPWPGPQV 781
FS ILEAV +AA L+ PL+V VQ +TL+ +TS S Y PRLP L+P PGP
Sbjct: 918 FSK*ILEAVVEQAAEGQVLILRPLSVSWRVQLMTLMPLTSCSCPYLPRLPTLIPCPGPHT 739
Query: 780 TPVMFTLEVPGPMEMQSSPTPMTVLVMVTPDESPMWMPSVLGLSPGAVTLTSLISMSLHL 601
T + +P P E QSSP + L+M TP P W+PSVLGLS GA+ LT M L
Sbjct: 738 TFLTRRFTIPSPTETQSSPVEILELIMETPTLLPKWIPSVLGLSAGAMILTLSKVMFLAP 559
Query: 600 YMFMWKNLELSSVIPDTSPLFTKSITSELGRILQSYFLTQEFLLHTAGPCPSSFPLP 430
M K L + S TKS +G L S L Q L A P PS P P
Sbjct: 558 ITLM*KFLASIEDMSLISAFVTKSNLILMGSFLHSKVL*QLLTLQAALPSPSKVPPP 388
Score = 52.8 bits (109), Expect(2) = 1e-095
Identities = 21/55 (38%), Positives = 34/55 (61%)
Frame = +2 / +2
Query: 191 TDSTKAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCKGDVTIQVNGNLLA 355
+D T+A+ A+ +AC + ++IPKG F +G + +GPCK V I + G +LA
Sbjct: 155 SDITQALLRAFTTACQSPTPRKVVIPKGQFKLGEIMMSGPCKSPVEITLLGTVLA 319
Score = 27.2 bits (53), Expect(2) = 1e-037
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = -2 / -3
Query: 381 SLYWLRSVVASRLPFTWMVTSPLHGPVKLSGPTRKSPLGM 262
S W+ A +P + T LHGP + P+ P G+
Sbjct: 345 SFPWIEFPSARTVPSKVISTGDLHGPDIMISPSLNCPFGI 226
>gb|AY062447.1| Arabidopsis thaliana polygalacturonase; pectinase (At3g14060;
MDC16.18) mRNA, complete cds
Length = 1667
Score = 195 bits (420), Expect(4) = 1e-095
Identities = 76/160 (47%), Positives = 101/160 (63%)
Frame = +2 / +1
Query: 434 KGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGITLLNSKFFHMNMYKCKD 613
K DGQG W N C K C LP ++ + N +++ IT NSK FHMN+ CK+
Sbjct: 580 KAIFDGQGSLAWKANDCAKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKN 759
Query: 614 MLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGPGTSKVNITGVTCGP 793
+ + D+ + AP +S NTDGIH+G S+GV + I GDDC+SIG GT + + V CGP
Sbjct: 760 ITLTDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGP 939
Query: 794 GHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAY 913
GHGISIGSLGRY +E+ V + V+ C +K T NGVRIK +
Sbjct: 940 GHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGVRIKTW 1059
Score = 117 bits (250), Expect(3) = 8e-036
Identities = 58/118 (49%), Positives = 69/118 (58%)
Frame = -2 / -1
Query: 912 YALMRTPLAVFLSVQSLTLISVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQ 733
+ LMRTPL+VFL LT+ T S Y PRLPM +P PGP T VP PME Q
Sbjct: 1058 HVLMRTPLSVFLMRHFLTVTPFTGCSLGYLPRLPMEIPCPGPHSTFSTMRFSVPSPMETQ 879
Query: 732 SSPTPMTVLVMVTPDESPMWMPSVLGLSPGAVTLTSLISMSLHLYMFMWKNLELSSVI 559
SSP + + +TP + PMW+PSVL LS GA S+ M L L MFMWK+L VI
Sbjct: 878 SSPVLIFAPIKLTPLDLPMWIPSVLRLSGGASIPISVRVMFLQLRMFMWKSLLFVDVI 705
Score = 112 bits (240), Expect(4) = 1e-095
Identities = 45/107 (42%), Positives = 64/107 (59%)
Frame = +2 / +1
Query: 938 ASKIHYENIKMEDSGYPIIIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAVNL 1117
AS I +E+I M++ P++ID +YCP C A SKV + DVT KNI GTS+T AV L
Sbjct: 1081 ASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSKVKLSDVTIKNIKGTSATKVAVKL 1260
Query: 1118 LCSAKIPCTGVTMDDVNIKYSGTNNKTMAVCKNAKGSAKGCLKELAC 1258
+CS +PCT + + D+N+ ++G ++ C N K G L AC
Sbjct: 1261 MCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIKPILSGKLVPAAC 1401
Score = 68.9 bits (144), Expect(4) = 1e-095
Identities = 25/60 (41%), Positives = 36/60 (60%)
Frame = +2 / +1
Query: 254 TILIPKGDFLVGPLNFTGPCKGDVTIQVNGNLLATTDLSQYKDHGNWIEILRVDNLVITG 433
TI +PKG++LV L F GPCKG VT+++NGN A + K H WI+ + + + G
Sbjct: 397 TITVPKGEYLVESLEFKGPCKGPVTLELNGNFKAPATVKTTKPHAGWIDFENLADFTLNG 576
Score = 43.2 bits (88), Expect(3) = 8e-036
Identities = 35/107 (32%), Positives = 45/107 (42%)
Frame = -2 / -1
Query: 1254 ASSLRQPLALPLAFLHTAXXXXXXXXXXXLTSSMVTPVHGILAEQSRLTASGVEEVPVMF 1075
A+ PL + L H L S V G TA+ V +VP+MF
Sbjct: 1397 AAGTNFPLRIGLMLEHAETAGPSLPLWTKLMSERAILVQGTPLLHISFTATFVADVPLMF 1218
Query: 1074 LKVTSLTVTLEAPLAVHNLLGQYFMSMMMG*PESSILIFS*WILEAV 934
L VTS T + A+ GQY SM G SI+I S +LEA+
Sbjct: 1217 LIVTSDNFTFDGTPALQWP*GQYSWSMRTGRLTLSIVISSKRMLEAI 1077
Score = 39.6 bits (80), Expect(3) = 8e-036
Identities = 22/49 (44%), Positives = 25/49 (51%)
Frame = -2 / -1
Query: 399 SIQLP*SLYWLRSVVASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIV 253
SI * L L A +LPF VT PLHGP+ T+ SP G IV
Sbjct: 542 SIHPA*GLVVLTVAGALKLPFNSKVTGPLHGPLNSRLSTKYSPFGTVIV 396
Score = 35.0 bits (70), Expect(4) = 1e-095
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +2 / +1
Query: 143 GGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTI 259
G S D+ GA G+GKTD + A A AC T+
Sbjct: 292 GASLDVKASGAKGDGKTDDSAAFAAARKEACAAGSTITV 408
>gb|AY114635.1| Arabidopsis thaliana polygalacturonase; pectinase (At3g14060) mRNA,
complete cds
Length = 1484
Score = 195 bits (420), Expect(4) = 1e-095
Identities = 76/160 (47%), Positives = 101/160 (63%)
Frame = +2 / +1
Query: 434 KGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGITLLNSKFFHMNMYKCKD 613
K DGQG W N C K C LP ++ + N +++ IT NSK FHMN+ CK+
Sbjct: 490 KAIFDGQGSLAWKANDCAKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKN 669
Query: 614 MLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGPGTSKVNITGVTCGP 793
+ + D+ + AP +S NTDGIH+G S+GV + I GDDC+SIG GT + + V CGP
Sbjct: 670 ITLTDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGP 849
Query: 794 GHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAY 913
GHGISIGSLGRY +E+ V + V+ C +K T NGVRIK +
Sbjct: 850 GHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGVRIKTW 969
Score = 117 bits (250), Expect(3) = 7e-036
Identities = 58/118 (49%), Positives = 69/118 (58%)
Frame = -2 / -1
Query: 912 YALMRTPLAVFLSVQSLTLISVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQ 733
+ LMRTPL+VFL LT+ T S Y PRLPM +P PGP T VP PME Q
Sbjct: 968 HVLMRTPLSVFLMRHFLTVTPFTGCSLGYLPRLPMEIPCPGPHSTFSTMRFSVPSPMETQ 789
Query: 732 SSPTPMTVLVMVTPDESPMWMPSVLGLSPGAVTLTSLISMSLHLYMFMWKNLELSSVI 559
SSP + + +TP + PMW+PSVL LS GA S+ M L L MFMWK+L VI
Sbjct: 788 SSPVLIFAPIKLTPLDLPMWIPSVLRLSGGASIPISVRVMFLQLRMFMWKSLLFVDVI 615
Score = 112 bits (240), Expect(4) = 1e-095
Identities = 45/107 (42%), Positives = 64/107 (59%)
Frame = +2 / +1
Query: 938 ASKIHYENIKMEDSGYPIIIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAVNL 1117
AS I +E+I M++ P++ID +YCP C A SKV + DVT KNI GTS+T AV L
Sbjct: 991 ASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSKVKLSDVTIKNIKGTSATKVAVKL 1170
Query: 1118 LCSAKIPCTGVTMDDVNIKYSGTNNKTMAVCKNAKGSAKGCLKELAC 1258
+CS +PCT + + D+N+ ++G ++ C N K G L AC
Sbjct: 1171 MCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIKPILSGKLVPAAC 1311
Score = 68.9 bits (144), Expect(4) = 1e-095
Identities = 25/60 (41%), Positives = 36/60 (60%)
Frame = +2 / +1
Query: 254 TILIPKGDFLVGPLNFTGPCKGDVTIQVNGNLLATTDLSQYKDHGNWIEILRVDNLVITG 433
TI +PKG++LV L F GPCKG VT+++NGN A + K H WI+ + + + G
Sbjct: 307 TITVPKGEYLVESLEFKGPCKGPVTLELNGNFKAPATVKTTKPHAGWIDFENLADFTLNG 486
Score = 43.2 bits (88), Expect(3) = 7e-036
Identities = 35/107 (32%), Positives = 45/107 (42%)
Frame = -2 / -1
Query: 1254 ASSLRQPLALPLAFLHTAXXXXXXXXXXXLTSSMVTPVHGILAEQSRLTASGVEEVPVMF 1075
A+ PL + L H L S V G TA+ V +VP+MF
Sbjct: 1307 AAGTNFPLRIGLMLEHAETAGPSLPLWTKLMSERAILVQGTPLLHISFTATFVADVPLMF 1128
Query: 1074 LKVTSLTVTLEAPLAVHNLLGQYFMSMMMG*PESSILIFS*WILEAV 934
L VTS T + A+ GQY SM G SI+I S +LEA+
Sbjct: 1127 LIVTSDNFTFDGTPALQWP*GQYSWSMRTGRLTLSIVISSKRMLEAI 987
Score = 39.6 bits (80), Expect(3) = 7e-036
Identities = 22/49 (44%), Positives = 25/49 (51%)
Frame = -2 / -1
Query: 399 SIQLP*SLYWLRSVVASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIV 253
SI * L L A +LPF VT PLHGP+ T+ SP G IV
Sbjct: 452 SIHPA*GLVVLTVAGALKLPFNSKVTGPLHGPLNSRLSTKYSPFGTVIV 306
Score = 35.0 bits (70), Expect(4) = 1e-095
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +2 / +1
Query: 143 GGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTI 259
G S D+ GA G+GKTD + A A AC T+
Sbjct: 202 GASLDVKASGAKGDGKTDDSAAFAAARKEACAAGSTITV 318
>dbj|AK118684.1| Arabidopsis thaliana At5g48140 mRNA for putative polygalacturonase,
complete cds, clone: RAFL19-95-F20
Length = 1466
Score = 322 bits (697), Expect(2) = 3e-095
Identities = 127/289 (43%), Positives = 180/289 (62%)
Frame = +2 / +1
Query: 392 WIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGITLL 571
W+ ++ + G G DG+G A W N+C K ++CK LP S+ DFV + ++ GIT L
Sbjct: 406 WVAFRNINGFKLNGGGVFDGEGNAAWRVNNCHKTFNCKKLPISIRFDFVTDAKIRGITSL 585
Query: 572 NSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGP 751
++K FH+N+ K++ +DV + AP +SPNTDGIH+G S G+ I N+ I GDDC+S+G
Sbjct: 586 DAKHFHINVIGAKNVTFEDVKIIAPAESPNTDGIHVGRSDGIKIINSFISTGDDCVSVGD 765
Query: 752 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAYEDAASV 931
G + + VTCGPGHGISIGSLGRY E++V+ I + +CTL++T NG+RIK + AA
Sbjct: 766 GMKNLLVERVTCGPGHGISIGSLGRYSHEENVSGIKIINCTLQETDNGLRIKTWPSAACT 945
Query: 932 LTASKIHYENIKMEDSGYPIIIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAV 1111
TAS IH+ENI +++ PI+ID +YCP C S + + +++FK I GTS +AV
Sbjct: 946 TTASDIHFENILLKNVSNPILIDQEYCPWNQCNKQKPSTIKLANISFKKIRGTSGNKDAV 1125
Query: 1112 NLLCSAKIPCTGVTMDDVNIKYSGTNNKTMAVCKNAKGSAKGCLKELAC 1258
LLCS PC V + DVNI+Y+G + C N G AC
Sbjct: 1126 KLLCSKGYPCQNVEVGDVNIQYTGADGPATFQCSNVSPKLVGTQIPKAC 1272
Score = 116 bits (249), Expect(4) = 8e-039
Identities = 54/113 (47%), Positives = 71/113 (62%)
Frame = -2 / -1
Query: 963 IFS*WILEAVSTEAASSYALMRTPLAVFLSVQSLTLISVTSFSSLYRPRLPMLMPWPGPQ 784
+FS WI EAV +AA + L+ PL+V VQ + L+ +T S LY PRLP+L+P PGP
Sbjct: 977 MFSKWISEAVVVQAAEGHVLILRPLSVSWRVQLMILMPLTFSSWLYLPRLPILIPCPGPH 798
Query: 783 VTPVMFTLEVPGPMEMQSSPTPMTVLVMVTPDESPMWMPSVLGLSPGAVTLTS 625
VT +P P E QSSP + L+++ P P W+PSVLGLS GA+ LTS
Sbjct: 797 VTLSTRRFFIPSPTETQSSPVEINELMILIPSLLPTWIPSVLGLSAGAMILTS 639
Score = 50.6 bits (104), Expect(2) = 3e-095
Identities = 20/55 (36%), Positives = 33/55 (60%)
Frame = +2 / +1
Query: 191 TDSTKAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCKGDVTIQVNGNLLA 355
+D T A+ +A+ AC K T++IPKG++ +G + GPCK + I + G + A
Sbjct: 214 SDITNALLKAFNEACQFPTKSTVMIPKGEYKLGEIVMMGPCKAPIRIALLGTVKA 378
Score = 36.8 bits (74), Expect(4) = 8e-039
Identities = 21/60 (35%), Positives = 29/60 (48%)
Frame = -2 / -1
Query: 1164 TSSMVTPVHGILAEQSRLTASGVEEVPVMFLKVTSLTVTLEAPLAVHNLLGQYFMSMMMG 985
TS T HG TAS +VP++FLK+ + ++ +H GQY SM MG
Sbjct: 1178 TSPTSTF*HGYPLLHKSFTASLFPDVPLIFLKLMLANLIVDGFCLLHWFHGQYSWSMRMG 999
Score = 33.6 bits (67), Expect(4) = 8e-039
Identities = 20/54 (37%), Positives = 22/54 (40%)
Frame = -2 / -1
Query: 591 MWKNLELSSVIPDTSPLFTKSITSELGRILQSYFLTQEFLLHTAGPCPSSFPLP 430
MWK V+P TKS +G LQ L Q L A P PS P P
Sbjct: 605 MWKCFASKEVMPLIFASVTKSNLMLMGSFLQLKVLWQLLTLQAAFPSPSKTPPP 444
Score = 32.7 bits (65), Expect(4) = 8e-039
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = -2 / -1
Query: 354 ASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIVCFPVPPHADAHASCTAFVLS 193
A +P ++ LHGP+ P+ SP G+ V F HA +A A V+S
Sbjct: 377 AFTVPRRAILIGALHGPIITISPSLYSPFGIITVLFVGNWHASLNAFNNALVIS 216
>ref|NM_124188.2| Arabidopsis thaliana polygalacturonase AT5G48140 mRNA, complete cds
Length = 1439
Score = 322 bits (697), Expect(2) = 3e-095
Identities = 127/289 (43%), Positives = 180/289 (62%)
Frame = +2 / +1
Query: 392 WIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGITLL 571
W+ ++ + G G DG+G A W N+C K ++CK LP S+ DFV + ++ GIT L
Sbjct: 406 WVAFRNINGFKLNGGGVFDGEGNAAWRVNNCHKTFNCKKLPISIRFDFVTDAKIRGITSL 585
Query: 572 NSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGP 751
++K FH+N+ K++ +DV + AP +SPNTDGIH+G S G+ I N+ I GDDC+S+G
Sbjct: 586 DAKHFHINVIGAKNVTFEDVKIIAPAESPNTDGIHVGRSDGIKIINSFISTGDDCVSVGD 765
Query: 752 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAYEDAASV 931
G + + VTCGPGHGISIGSLGRY E++V+ I + +CTL++T NG+RIK + AA
Sbjct: 766 GMKNLLVERVTCGPGHGISIGSLGRYSHEENVSGIKIINCTLQETDNGLRIKTWPSAACT 945
Query: 932 LTASKIHYENIKMEDSGYPIIIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAV 1111
TAS IH+ENI +++ PI+ID +YCP C S + + +++FK I GTS +AV
Sbjct: 946 TTASDIHFENILLKNVSNPILIDQEYCPWNQCNKQKPSTIKLANISFKKIRGTSGNKDAV 1125
Query: 1112 NLLCSAKIPCTGVTMDDVNIKYSGTNNKTMAVCKNAKGSAKGCLKELAC 1258
LLCS PC V + DVNI+Y+G + C N G AC
Sbjct: 1126 KLLCSKGYPCQNVEVGDVNIQYTGADGPATFQCSNVSPKLVGTQIPKAC 1272
Score = 116 bits (249), Expect(4) = 8e-039
Identities = 54/113 (47%), Positives = 71/113 (62%)
Frame = -2 / -1
Query: 963 IFS*WILEAVSTEAASSYALMRTPLAVFLSVQSLTLISVTSFSSLYRPRLPMLMPWPGPQ 784
+FS WI EAV +AA + L+ PL+V VQ + L+ +T S LY PRLP+L+P PGP
Sbjct: 977 MFSKWISEAVVVQAAEGHVLILRPLSVSWRVQLMILMPLTFSSWLYLPRLPILIPCPGPH 798
Query: 783 VTPVMFTLEVPGPMEMQSSPTPMTVLVMVTPDESPMWMPSVLGLSPGAVTLTS 625
VT +P P E QSSP + L+++ P P W+PSVLGLS GA+ LTS
Sbjct: 797 VTLSTRRFFIPSPTETQSSPVEINELMILIPSLLPTWIPSVLGLSAGAMILTS 639
Score = 50.6 bits (104), Expect(2) = 3e-095
Identities = 20/55 (36%), Positives = 33/55 (60%)
Frame = +2 / +1
Query: 191 TDSTKAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCKGDVTIQVNGNLLA 355
+D T A+ +A+ AC K T++IPKG++ +G + GPCK + I + G + A
Sbjct: 214 SDITNALLKAFNEACQFPTKSTVMIPKGEYKLGEIVMMGPCKAPIRIALLGTVKA 378
Score = 36.8 bits (74), Expect(4) = 8e-039
Identities = 21/60 (35%), Positives = 29/60 (48%)
Frame = -2 / -1
Query: 1164 TSSMVTPVHGILAEQSRLTASGVEEVPVMFLKVTSLTVTLEAPLAVHNLLGQYFMSMMMG 985
TS T HG TAS +VP++FLK+ + ++ +H GQY SM MG
Sbjct: 1178 TSPTSTF*HGYPLLHKSFTASLFPDVPLIFLKLMLANLIVDGFCLLHWFHGQYSWSMRMG 999
Score = 33.6 bits (67), Expect(4) = 8e-039
Identities = 20/54 (37%), Positives = 22/54 (40%)
Frame = -2 / -1
Query: 591 MWKNLELSSVIPDTSPLFTKSITSELGRILQSYFLTQEFLLHTAGPCPSSFPLP 430
MWK V+P TKS +G LQ L Q L A P PS P P
Sbjct: 605 MWKCFASKEVMPLIFASVTKSNLMLMGSFLQLKVLWQLLTLQAAFPSPSKTPPP 444
Score = 32.7 bits (65), Expect(4) = 8e-039
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = -2 / -1
Query: 354 ASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIVCFPVPPHADAHASCTAFVLS 193
A +P ++ LHGP+ P+ SP G+ V F HA +A A V+S
Sbjct: 377 AFTVPRRAILIGALHGPIITISPSLYSPFGIITVLFVGNWHASLNAFNNALVIS 216
>gb|BT009687.1| Arabidopsis thaliana At5g48140 mRNA, complete cds
Length = 1188
Score = 322 bits (697), Expect(2) = 3e-095
Identities = 127/289 (43%), Positives = 180/289 (62%)
Frame = +2 / +1
Query: 392 WIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGITLL 571
W+ ++ + G G DG+G A W N+C K ++CK LP S+ DFV + ++ GIT L
Sbjct: 292 WVAFRNINGFKLNGGGVFDGEGNAAWRVNNCHKTFNCKKLPISIRFDFVTDAKIRGITSL 471
Query: 572 NSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGP 751
++K FH+N+ K++ +DV + AP +SPNTDGIH+G S G+ I N+ I GDDC+S+G
Sbjct: 472 DAKHFHINVIGAKNVTFEDVKIIAPAESPNTDGIHVGRSDGIKIINSFISTGDDCVSVGD 651
Query: 752 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAYEDAASV 931
G + + VTCGPGHGISIGSLGRY E++V+ I + +CTL++T NG+RIK + AA
Sbjct: 652 GMKNLLVERVTCGPGHGISIGSLGRYSHEENVSGIKIINCTLQETDNGLRIKTWPSAACT 831
Query: 932 LTASKIHYENIKMEDSGYPIIIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAV 1111
TAS IH+ENI +++ PI+ID +YCP C S + + +++FK I GTS +AV
Sbjct: 832 TTASDIHFENILLKNVSNPILIDQEYCPWNQCNKQKPSTIKLANISFKKIRGTSGNKDAV 1011
Query: 1112 NLLCSAKIPCTGVTMDDVNIKYSGTNNKTMAVCKNAKGSAKGCLKELAC 1258
LLCS PC V + DVNI+Y+G + C N G AC
Sbjct: 1012 KLLCSKGYPCQNVEVGDVNIQYTGADGPATFQCSNVSPKLVGTQIPKAC 1158
Score = 116 bits (249), Expect(5) = 5e-043
Identities = 54/113 (47%), Positives = 71/113 (62%)
Frame = -2 / -2
Query: 963 IFS*WILEAVSTEAASSYALMRTPLAVFLSVQSLTLISVTSFSSLYRPRLPMLMPWPGPQ 784
+FS WI EAV +AA + L+ PL+V VQ + L+ +T S LY PRLP+L+P PGP
Sbjct: 863 MFSKWISEAVVVQAAEGHVLILRPLSVSWRVQLMILMPLTFSSWLYLPRLPILIPCPGPH 684
Query: 783 VTPVMFTLEVPGPMEMQSSPTPMTVLVMVTPDESPMWMPSVLGLSPGAVTLTS 625
VT +P P E QSSP + L+++ P P W+PSVLGLS GA+ LTS
Sbjct: 683 VTLSTRRFFIPSPTETQSSPVEINELMILIPSLLPTWIPSVLGLSAGAMILTS 525
Score = 50.6 bits (104), Expect(2) = 3e-095
Identities = 20/55 (36%), Positives = 33/55 (60%)
Frame = +2 / +1
Query: 191 TDSTKAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCKGDVTIQVNGNLLA 355
+D T A+ +A+ AC K T++IPKG++ +G + GPCK + I + G + A
Sbjct: 100 SDITNALLKAFNEACQFPTKSTVMIPKGEYKLGEIVMMGPCKAPIRIALLGTVKA 264
Score = 36.8 bits (74), Expect(5) = 5e-043
Identities = 21/60 (35%), Positives = 29/60 (48%)
Frame = -2 / -2
Query: 1164 TSSMVTPVHGILAEQSRLTASGVEEVPVMFLKVTSLTVTLEAPLAVHNLLGQYFMSMMMG 985
TS T HG TAS +VP++FLK+ + ++ +H GQY SM MG
Sbjct: 1064 TSPTSTF*HGYPLLHKSFTASLFPDVPLIFLKLMLANLIVDGFCLLHWFHGQYSWSMRMG 885
Score = 33.6 bits (67), Expect(5) = 5e-043
Identities = 20/54 (37%), Positives = 22/54 (40%)
Frame = -2 / -2
Query: 591 MWKNLELSSVIPDTSPLFTKSITSELGRILQSYFLTQEFLLHTAGPCPSSFPLP 430
MWK V+P TKS +G LQ L Q L A P PS P P
Sbjct: 491 MWKCFASKEVMPLIFASVTKSNLMLMGSFLQLKVLWQLLTLQAAFPSPSKTPPP 330
Score = 32.7 bits (65), Expect(5) = 5e-043
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = -2 / -2
Query: 354 ASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIVCFPVPPHADAHASCTAFVLS 193
A +P ++ LHGP+ P+ SP G+ V F HA +A A V+S
Sbjct: 263 AFTVPRRAILIGALHGPIITISPSLYSPFGIITVLFVGNWHASLNAFNNALVIS 102
Score = 31.8 bits (63), Expect(5) = 5e-043
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = -1 / -1
Query: 1012 AVLHVDDDGVARVLHLDILIVDL 944
AVL VD+DGVA VL D+L +D+
Sbjct: 912 AVLLVDEDGVADVLEEDVLEMDI 844
>gb|AF428425.1|AF428425 Arabidopsis thaliana At1g02790/T14P4_2 mRNA, complete cds
Length = 1571
Score = 219 bits (472), Expect(4) = 4e-093
Identities = 82/174 (47%), Positives = 124/174 (71%)
Frame = +2 / +1
Query: 392 WIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGITLL 571
W RVDNLV+TG G G+G AVW + C KK C + P SL + N E++GI+ +
Sbjct: 454 WFLFERVDNLVLTGTGTFHGKGEAVWKADGCGKKVQCNLPPTSLKFRNMKNVEINGISSV 633
Query: 572 NSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGP 751
N+K FHM + K +++ I+++ +TAP +SPNTDGIH+ ++ V+I ++ I GDDC+S+G
Sbjct: 634 NAKAFHMFLVKTENVNIQNIKLTAPAESPNTDGIHLSNADNVSILDSTIATGDDCVSVGR 813
Query: 752 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAY 913
G++ V + V CGPGHG+S+GSLG+YK+E+DV+ I+V +CT+ +T NG+RIK +
Sbjct: 814 GSNNVTVERVICGPGHGLSVGSLGKYKNEEDVSGIHVNNCTMIETDNGLRIKTW 975
Score = 100 bits (214), Expect(3) = 1e-040
Identities = 49/94 (52%), Positives = 59/94 (62%)
Frame = -2 / -1
Query: 912 YALMRTPLAVFLSVQSLTLISVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQ 733
+ L+ PL+V + VQ LT I +TS S LY PRLP L P PGPQ+T TL P P E Q
Sbjct: 974 HVLILRPLSVSIIVQLLTWIPLTSSSFLYLPRLPTLRPCPGPQITRSTVTLLEPRPTETQ 795
Query: 732 SSPTPMTVLVMVTPDESPMWMPSVLGLSPGAVTL 631
SSP M + M+T W+PSVLGLS GAV+L
Sbjct: 794 SSPVAMVLSRMLTLSALLKWIPSVLGLSAGAVSL 693
Score = 93.6 bits (198), Expect(4) = 4e-093
Identities = 38/93 (40%), Positives = 49/93 (52%)
Frame = +2 / +1
Query: 83 CTVHGEXXXXXXXXXXXXGPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTIL 262
C +GE G +DITK GA G+G T++ KA W C T+L
Sbjct: 154 CVANGEYLGGRRGLAANSGNPTVYDITKFGAVGDGSTNTFKAFLNTWIQVCDSPVPATLL 333
Query: 263 IPKGDFLVGPLNFTGPCKGDVTIQVNGNLLATT 361
+PKG FL GP+ F GPCK VT+ V G ++ATT
Sbjct: 334 VPKGTFLAGPVIFAGPCKSKVTVNVIGTIIATT 432
Score = 64.3 bits (134), Expect(4) = 4e-093
Identities = 23/49 (46%), Positives = 33/49 (67%)
Frame = +2 / +1
Query: 1037 GASKVTVKDVTFKNITGTSSTPEAVNLLCSAKIPCTGVTMDDVNIKYSG 1183
G S+V + D+ FKNI GT+ T + V ++CS +PC GV + DVN+ Y G
Sbjct: 1081 GDSQVAISDILFKNIRGTTITKDVVQIMCSKSVPCQGVNVVDVNLDYVG 1227
Score = 59.7 bits (124), Expect(3) = 1e-040
Identities = 30/69 (43%), Positives = 36/69 (52%)
Frame = -2 / -1
Query: 360 VVASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIVCFPVPPHADAHASCTAFVLSVLPL 181
VVA +P T VT LHGP K++GP + PLG V H H A + V P
Sbjct: 431 VVAMIVPITLTVTLLLHGPAKMTGPAKNVPLGTSSVAGTGLSHTCIHVFKNALKVLVEPS 252
Query: 180 PEAPNLVMS 154
P APNLV+S
Sbjct: 251 PTAPNLVIS 225
Score = 47.8 bits (98), Expect(3) = 1e-040
Identities = 24/62 (38%), Positives = 31/62 (50%)
Frame = -2 / -1
Query: 591 MWKNLELSSVIPDTSPLFTKSITSELGRILQSYFLTQEFLLHTAGPCPSSFPLPVMTRLS 412
MWK + ++P S F ++G L FL Q TA P P + P+PV TRLS
Sbjct: 653 MWKAFAFTELMPLISTFFMFLNLRDVGGRLHWTFLPQPSAFQTASPFPWNVPVPVRTRLS 474
Query: 411 TR 406
TR
Sbjct: 473 TR 468
Score = 26.7 bits (52), Expect(4) = 4e-093
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2 / +1
Query: 938 ASKIHYENIKMEDSGYPIIIDMKY 1009
A I +ENI M+ PIIID Y
Sbjct: 997 AVDIKFENIIMQSVKNPIIIDQNY 1068
>ref|NM_100158.1| Arabidopsis thaliana PGA4 (POLYGALACTURONASE 4); polygalacturonase
AT1G02790 (PGA4) mRNA, complete cds
Length = 1571
Score = 219 bits (472), Expect(4) = 4e-093
Identities = 82/174 (47%), Positives = 124/174 (71%)
Frame = +2 / +1
Query: 392 WIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGITLL 571
W RVDNLV+TG G G+G AVW + C KK C + P SL + N E++GI+ +
Sbjct: 454 WFLFERVDNLVLTGTGTFHGKGEAVWKADGCGKKVQCNLPPTSLKFRNMKNVEINGISSV 633
Query: 572 NSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGP 751
N+K FHM + K +++ I+++ +TAP +SPNTDGIH+ ++ V+I ++ I GDDC+S+G
Sbjct: 634 NAKAFHMFLVKTENVNIQNIKLTAPAESPNTDGIHLSNADNVSILDSTIATGDDCVSVGR 813
Query: 752 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAY 913
G++ V + V CGPGHG+S+GSLG+YK+E+DV+ I+V +CT+ +T NG+RIK +
Sbjct: 814 GSNNVTVERVICGPGHGLSVGSLGKYKNEEDVSGIHVNNCTMIETDNGLRIKTW 975
Score = 100 bits (214), Expect(3) = 1e-040
Identities = 49/94 (52%), Positives = 59/94 (62%)
Frame = -2 / -1
Query: 912 YALMRTPLAVFLSVQSLTLISVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQ 733
+ L+ PL+V + VQ LT I +TS S LY PRLP L P PGPQ+T TL P P E Q
Sbjct: 974 HVLILRPLSVSIIVQLLTWIPLTSSSFLYLPRLPTLRPCPGPQITRSTVTLLEPRPTETQ 795
Query: 732 SSPTPMTVLVMVTPDESPMWMPSVLGLSPGAVTL 631
SSP M + M+T W+PSVLGLS GAV+L
Sbjct: 794 SSPVAMVLSRMLTLSALLKWIPSVLGLSAGAVSL 693
Score = 93.6 bits (198), Expect(4) = 4e-093
Identities = 38/93 (40%), Positives = 49/93 (52%)
Frame = +2 / +1
Query: 83 CTVHGEXXXXXXXXXXXXGPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTIL 262
C +GE G +DITK GA G+G T++ KA W C T+L
Sbjct: 154 CVANGEYLGGRRGLAANSGNPTVYDITKFGAVGDGSTNTFKAFLNTWIQVCDSPVPATLL 333
Query: 263 IPKGDFLVGPLNFTGPCKGDVTIQVNGNLLATT 361
+PKG FL GP+ F GPCK VT+ V G ++ATT
Sbjct: 334 VPKGTFLAGPVIFAGPCKSKVTVNVIGTIIATT 432
Score = 64.3 bits (134), Expect(4) = 4e-093
Identities = 23/49 (46%), Positives = 33/49 (67%)
Frame = +2 / +1
Query: 1037 GASKVTVKDVTFKNITGTSSTPEAVNLLCSAKIPCTGVTMDDVNIKYSG 1183
G S+V + D+ FKNI GT+ T + V ++CS +PC GV + DVN+ Y G
Sbjct: 1081 GDSQVAISDILFKNIRGTTITKDVVQIMCSKSVPCQGVNVVDVNLDYVG 1227
Score = 59.7 bits (124), Expect(3) = 1e-040
Identities = 30/69 (43%), Positives = 36/69 (52%)
Frame = -2 / -1
Query: 360 VVASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIVCFPVPPHADAHASCTAFVLSVLPL 181
VVA +P T VT LHGP K++GP + PLG V H H A + V P
Sbjct: 431 VVAMIVPITLTVTLLLHGPAKMTGPAKNVPLGTSSVAGTGLSHTCIHVFKNALKVLVEPS 252
Query: 180 PEAPNLVMS 154
P APNLV+S
Sbjct: 251 PTAPNLVIS 225
Score = 47.8 bits (98), Expect(3) = 1e-040
Identities = 24/62 (38%), Positives = 31/62 (50%)
Frame = -2 / -1
Query: 591 MWKNLELSSVIPDTSPLFTKSITSELGRILQSYFLTQEFLLHTAGPCPSSFPLPVMTRLS 412
MWK + ++P S F ++G L FL Q TA P P + P+PV TRLS
Sbjct: 653 MWKAFAFTELMPLISTFFMFLNLRDVGGRLHWTFLPQPSAFQTASPFPWNVPVPVRTRLS 474
Query: 411 TR 406
TR
Sbjct: 473 TR 468
Score = 26.7 bits (52), Expect(4) = 4e-093
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2 / +1
Query: 938 ASKIHYENIKMEDSGYPIIIDMKY 1009
A I +ENI M+ PIIID Y
Sbjct: 997 AVDIKFENIIMQSVKNPIIIDQNY 1068
>gb|AY065210.1| Arabidopsis thaliana putative polygalacturonase (At1g02790) mRNA,
complete cds
Length = 1561
Score = 219 bits (472), Expect(4) = 4e-093
Identities = 82/174 (47%), Positives = 124/174 (71%)
Frame = +2 / +1
Query: 392 WIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGITLL 571
W RVDNLV+TG G G+G AVW + C KK C + P SL + N E++GI+ +
Sbjct: 454 WFLFERVDNLVLTGTGTFHGKGEAVWKADGCGKKVQCNLPPTSLKFRNMKNVEINGISSV 633
Query: 572 NSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGP 751
N+K FHM + K +++ I+++ +TAP +SPNTDGIH+ ++ V+I ++ I GDDC+S+G
Sbjct: 634 NAKAFHMFLVKTENVNIQNIKLTAPAESPNTDGIHLSNADNVSILDSTIATGDDCVSVGR 813
Query: 752 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAY 913
G++ V + V CGPGHG+S+GSLG+YK+E+DV+ I+V +CT+ +T NG+RIK +
Sbjct: 814 GSNNVTVERVICGPGHGLSVGSLGKYKNEEDVSGIHVNNCTMIETDNGLRIKTW 975
Score = 100 bits (214), Expect(3) = 1e-040
Identities = 49/94 (52%), Positives = 59/94 (62%)
Frame = -2 / -3
Query: 912 YALMRTPLAVFLSVQSLTLISVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQ 733
+ L+ PL+V + VQ LT I +TS S LY PRLP L P PGPQ+T TL P P E Q
Sbjct: 974 HVLILRPLSVSIIVQLLTWIPLTSSSFLYLPRLPTLRPCPGPQITRSTVTLLEPRPTETQ 795
Query: 732 SSPTPMTVLVMVTPDESPMWMPSVLGLSPGAVTL 631
SSP M + M+T W+PSVLGLS GAV+L
Sbjct: 794 SSPVAMVLSRMLTLSALLKWIPSVLGLSAGAVSL 693
Score = 93.6 bits (198), Expect(4) = 4e-093
Identities = 38/93 (40%), Positives = 49/93 (52%)
Frame = +2 / +1
Query: 83 CTVHGEXXXXXXXXXXXXGPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTIL 262
C +GE G +DITK GA G+G T++ KA W C T+L
Sbjct: 154 CVANGEYLGGRRGLAANSGNPTVYDITKFGAVGDGSTNTFKAFLNTWIQVCDSPVPATLL 333
Query: 263 IPKGDFLVGPLNFTGPCKGDVTIQVNGNLLATT 361
+PKG FL GP+ F GPCK VT+ V G ++ATT
Sbjct: 334 VPKGTFLAGPVIFAGPCKSKVTVNVIGTIIATT 432
Score = 64.3 bits (134), Expect(4) = 4e-093
Identities = 23/49 (46%), Positives = 33/49 (67%)
Frame = +2 / +1
Query: 1037 GASKVTVKDVTFKNITGTSSTPEAVNLLCSAKIPCTGVTMDDVNIKYSG 1183
G S+V + D+ FKNI GT+ T + V ++CS +PC GV + DVN+ Y G
Sbjct: 1081 GDSQVAISDILFKNIRGTTITKDVVQIMCSKSVPCQGVNVVDVNLDYVG 1227
Score = 59.7 bits (124), Expect(3) = 1e-040
Identities = 30/69 (43%), Positives = 36/69 (52%)
Frame = -2 / -3
Query: 360 VVASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIVCFPVPPHADAHASCTAFVLSVLPL 181
VVA +P T VT LHGP K++GP + PLG V H H A + V P
Sbjct: 431 VVAMIVPITLTVTLLLHGPAKMTGPAKNVPLGTSSVAGTGLSHTCIHVFKNALKVLVEPS 252
Query: 180 PEAPNLVMS 154
P APNLV+S
Sbjct: 251 PTAPNLVIS 225
Score = 47.8 bits (98), Expect(3) = 1e-040
Identities = 24/62 (38%), Positives = 31/62 (50%)
Frame = -2 / -3
Query: 591 MWKNLELSSVIPDTSPLFTKSITSELGRILQSYFLTQEFLLHTAGPCPSSFPLPVMTRLS 412
MWK + ++P S F ++G L FL Q TA P P + P+PV TRLS
Sbjct: 653 MWKAFAFTELMPLISTFFMFLNLRDVGGRLHWTFLPQPSAFQTASPFPWNVPVPVRTRLS 474
Query: 411 TR 406
TR
Sbjct: 473 TR 468
Score = 26.7 bits (52), Expect(4) = 4e-093
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2 / +1
Query: 938 ASKIHYENIKMEDSGYPIIIDMKY 1009
A I +ENI M+ PIIID Y
Sbjct: 997 AVDIKFENIIMQSVKNPIIIDQNY 1068
>emb|X72291.1|ATEXOPA A.thaliana (clone GBGe184) mRNA for exopolygalacturonase
Length = 1477
Score = 219 bits (472), Expect(4) = 4e-093
Identities = 82/174 (47%), Positives = 124/174 (71%)
Frame = +2 / +1
Query: 392 WIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGITLL 571
W RVDNLV+TG G G+G AVW + C KK C + P SL + N E++GI+ +
Sbjct: 442 WFLFERVDNLVLTGTGTFHGKGEAVWKADGCGKKVQCNLPPTSLKFRNMKNVEINGISSV 621
Query: 572 NSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGP 751
N+K FHM + K +++ I+++ +TAP +SPNTDGIH+ ++ V+I ++ I GDDC+S+G
Sbjct: 622 NAKAFHMFLVKTENVNIQNIKLTAPAESPNTDGIHLSNADNVSILDSTIATGDDCVSVGR 801
Query: 752 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAY 913
G++ V + V CGPGHG+S+GSLG+YK+E+DV+ I+V +CT+ +T NG+RIK +
Sbjct: 802 GSNNVTVERVICGPGHGLSVGSLGKYKNEEDVSGIHVNNCTMIETDNGLRIKTW 963
Score = 100 bits (214), Expect(3) = 1e-040
Identities = 49/94 (52%), Positives = 59/94 (62%)
Frame = -2 / -3
Query: 912 YALMRTPLAVFLSVQSLTLISVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQ 733
+ L+ PL+V + VQ LT I +TS S LY PRLP L P PGPQ+T TL P P E Q
Sbjct: 962 HVLILRPLSVSIIVQLLTWIPLTSSSFLYLPRLPTLRPCPGPQITRSTVTLLEPRPTETQ 783
Query: 732 SSPTPMTVLVMVTPDESPMWMPSVLGLSPGAVTL 631
SSP M + M+T W+PSVLGLS GAV+L
Sbjct: 782 SSPVAMVLSRMLTLSALLKWIPSVLGLSAGAVSL 681
Score = 93.6 bits (198), Expect(4) = 4e-093
Identities = 38/93 (40%), Positives = 49/93 (52%)
Frame = +2 / +1
Query: 83 CTVHGEXXXXXXXXXXXXGPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTIL 262
C +GE G +DITK GA G+G T++ KA W C T+L
Sbjct: 142 CVANGEYLGGRRGLAANSGNPTVYDITKFGAVGDGSTNTFKAFLNTWIQVCDSPVPATLL 321
Query: 263 IPKGDFLVGPLNFTGPCKGDVTIQVNGNLLATT 361
+PKG FL GP+ F GPCK VT+ V G ++ATT
Sbjct: 322 VPKGTFLAGPVIFAGPCKSKVTVNVIGTIIATT 420
Score = 64.3 bits (134), Expect(4) = 4e-093
Identities = 23/49 (46%), Positives = 33/49 (67%)
Frame = +2 / +1
Query: 1037 GASKVTVKDVTFKNITGTSSTPEAVNLLCSAKIPCTGVTMDDVNIKYSG 1183
G S+V + D+ FKNI GT+ T + V ++CS +PC GV + DVN+ Y G
Sbjct: 1069 GDSQVAISDILFKNIRGTTITKDVVQIMCSKSVPCQGVNVVDVNLDYVG 1215
Score = 59.7 bits (124), Expect(3) = 1e-040
Identities = 30/69 (43%), Positives = 36/69 (52%)
Frame = -2 / -3
Query: 360 VVASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIVCFPVPPHADAHASCTAFVLSVLPL 181
VVA +P T VT LHGP K++GP + PLG V H H A + V P
Sbjct: 419 VVAMIVPITLTVTLLLHGPAKMTGPAKNVPLGTSSVAGTGLSHTCIHVFKNALKVLVEPS 240
Query: 180 PEAPNLVMS 154
P APNLV+S
Sbjct: 239 PTAPNLVIS 213
Score = 47.8 bits (98), Expect(3) = 1e-040
Identities = 24/62 (38%), Positives = 31/62 (50%)
Frame = -2 / -3
Query: 591 MWKNLELSSVIPDTSPLFTKSITSELGRILQSYFLTQEFLLHTAGPCPSSFPLPVMTRLS 412
MWK + ++P S F ++G L FL Q TA P P + P+PV TRLS
Sbjct: 641 MWKAFAFTELMPLISTFFMFLNLRDVGGRLHWTFLPQPSAFQTASPFPWNVPVPVRTRLS 462
Query: 411 TR 406
TR
Sbjct: 461 TR 456
Score = 26.7 bits (52), Expect(4) = 4e-093
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2 / +1
Query: 938 ASKIHYENIKMEDSGYPIIIDMKY 1009
A I +ENI M+ PIIID Y
Sbjct: 985 AVDIKFENIIMQSVKNPIIIDQNY 1056
>gb|AY133812.1| Arabidopsis thaliana clone U18487 putative polygalacturonase
(At1g02790) mRNA, complete cds
Length = 1300
Score = 219 bits (472), Expect(4) = 4e-093
Identities = 82/174 (47%), Positives = 124/174 (71%)
Frame = +2 / +1
Query: 392 WIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGITLL 571
W RVDNLV+TG G G+G AVW + C KK C + P SL + N E++GI+ +
Sbjct: 385 WFLFERVDNLVLTGTGTFHGKGEAVWKADGCGKKVQCNLPPTSLKFRNMKNVEINGISSV 564
Query: 572 NSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGP 751
N+K FHM + K +++ I+++ +TAP +SPNTDGIH+ ++ V+I ++ I GDDC+S+G
Sbjct: 565 NAKAFHMFLVKTENVNIQNIKLTAPAESPNTDGIHLSNADNVSILDSTIATGDDCVSVGR 744
Query: 752 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAY 913
G++ V + V CGPGHG+S+GSLG+YK+E+DV+ I+V +CT+ +T NG+RIK +
Sbjct: 745 GSNNVTVERVICGPGHGLSVGSLGKYKNEEDVSGIHVNNCTMIETDNGLRIKTW 906
Score = 100 bits (214), Expect(3) = 1e-040
Identities = 49/94 (52%), Positives = 59/94 (62%)
Frame = -2 / -3
Query: 912 YALMRTPLAVFLSVQSLTLISVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQ 733
+ L+ PL+V + VQ LT I +TS S LY PRLP L P PGPQ+T TL P P E Q
Sbjct: 905 HVLILRPLSVSIIVQLLTWIPLTSSSFLYLPRLPTLRPCPGPQITRSTVTLLEPRPTETQ 726
Query: 732 SSPTPMTVLVMVTPDESPMWMPSVLGLSPGAVTL 631
SSP M + M+T W+PSVLGLS GAV+L
Sbjct: 725 SSPVAMVLSRMLTLSALLKWIPSVLGLSAGAVSL 624
Score = 93.6 bits (198), Expect(4) = 4e-093
Identities = 38/93 (40%), Positives = 49/93 (52%)
Frame = +2 / +1
Query: 83 CTVHGEXXXXXXXXXXXXGPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTIL 262
C +GE G +DITK GA G+G T++ KA W C T+L
Sbjct: 85 CVANGEYLGGRRGLAANSGNPTVYDITKFGAVGDGSTNTFKAFLNTWIQVCDSPVPATLL 264
Query: 263 IPKGDFLVGPLNFTGPCKGDVTIQVNGNLLATT 361
+PKG FL GP+ F GPCK VT+ V G ++ATT
Sbjct: 265 VPKGTFLAGPVIFAGPCKSKVTVNVIGTIIATT 363
Score = 64.3 bits (134), Expect(4) = 4e-093
Identities = 23/49 (46%), Positives = 33/49 (67%)
Frame = +2 / +1
Query: 1037 GASKVTVKDVTFKNITGTSSTPEAVNLLCSAKIPCTGVTMDDVNIKYSG 1183
G S+V + D+ FKNI GT+ T + V ++CS +PC GV + DVN+ Y G
Sbjct: 1012 GDSQVAISDILFKNIRGTTITKDVVQIMCSKSVPCQGVNVVDVNLDYVG 1158
Score = 59.7 bits (124), Expect(3) = 1e-040
Identities = 30/69 (43%), Positives = 36/69 (52%)
Frame = -2 / -3
Query: 360 VVASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIVCFPVPPHADAHASCTAFVLSVLPL 181
VVA +P T VT LHGP K++GP + PLG V H H A + V P
Sbjct: 362 VVAMIVPITLTVTLLLHGPAKMTGPAKNVPLGTSSVAGTGLSHTCIHVFKNALKVLVEPS 183
Query: 180 PEAPNLVMS 154
P APNLV+S
Sbjct: 182 PTAPNLVIS 156
Score = 47.8 bits (98), Expect(3) = 1e-040
Identities = 24/62 (38%), Positives = 31/62 (50%)
Frame = -2 / -3
Query: 591 MWKNLELSSVIPDTSPLFTKSITSELGRILQSYFLTQEFLLHTAGPCPSSFPLPVMTRLS 412
MWK + ++P S F ++G L FL Q TA P P + P+PV TRLS
Sbjct: 584 MWKAFAFTELMPLISTFFMFLNLRDVGGRLHWTFLPQPSAFQTASPFPWNVPVPVRTRLS 405
Query: 411 TR 406
TR
Sbjct: 404 TR 399
Score = 26.7 bits (52), Expect(4) = 4e-093
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2 / +1
Query: 938 ASKIHYENIKMEDSGYPIIIDMKY 1009
A I +ENI M+ PIIID Y
Sbjct: 928 AVDIKFENIIMQSVKNPIIIDQNY 999
>ref|NM_117928.1| Arabidopsis thaliana polygalacturonase AT4G18180 mRNA, complete cds
Length = 1245
Score = 316 bits (685), Expect(3) = 4e-093
Identities = 129/279 (46%), Positives = 181/279 (64%)
Frame = +2 / +1
Query: 353 ATTDLSQYKDHGNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMD 532
A+TDLS+Y+ G WI+ ++ L +TG G DGQG W N+C +CK+LP SL
Sbjct: 301 ASTDLSKYRSGGGWIQFGWINGLTLTGGGTFDGQGALAWPFNNCTSDSNCKLLPTSLKFV 480
Query: 533 FVNNGEVSGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNT 712
+N V I+ +NSKFFH+ + +C+D +N+TAP DSPNTDGIH+ SS V + +
Sbjct: 481 GMNRTVVRRISSVNSKFFHIALVECRDFKGTRLNITAPSDSPNTDGIHIERSSNVYFSRS 660
Query: 713 VIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTAN 892
I GDDC+SIG G S++ IT + CGPGHGIS+GSLGRY +EKDV + VKDC + T N
Sbjct: 661 HIATGDDCVSIGQGNSQITITSIKCGPGHGISVGSLGRYPNEKDVNGLVVKDCKISGTTN 840
Query: 893 GVRIKAYEDAASVLTASKIHYENIKMEDSGYPIIIDMKYCPNKLCTANGASKVTVKDVTF 1072
G+RIK + ++ + A+ + +ENI M + PIIID YCP C +N SKV + ++ F
Sbjct: 841 GIRIKTWANSPGLSAATNMTFENIIMNNVTNPIIIDQSYCPFSSCISNVPSKVELSEIYF 1020
Query: 1073 KNITGTSSTPEAVNLLCSAKIPCTGVTMDDVNIKYSGTN 1189
KNI GTSS+ AV L CS +PC V +++V++ S ++
Sbjct: 1021 KNIRGTSSSLVAVQLHCSRGMPCKKVYLENVHLDLSSSD 1137
Score = 148 bits (317), Expect(2) = 2e-035
Identities = 100/271 (36%), Positives = 135/271 (49%)
Frame = -2 / -2
Query: 1164 TSSMVTPVHGILAEQSRLTASGVEEVPVMFLKVTSLTVTLEAPLAVHNLLGQYFMSMMMG 985
T S T +HGI Q TA+ ++VP++FLK SL+ T E + GQ SMM+G
Sbjct: 1112 TFSKYTFLHGIPLLQCSCTATSEDDVPLIFLKYISLSSTFEGTFEMQEEKGQ*D*SMMIG 933
Query: 984 *PESSILIFS*WILEAVSTEAASSYALMRTPLAVFLSVQSLTLISVTSFSSLYRPRLPML 805
I+IFS +L A + L+ P V L +QS T +TSFS Y P+LP L
Sbjct: 932 LVTLFIIIFSKVMLVAALRPGELAQVLILIPFVVPLILQSFTTSPLTSFSFGYLPKLPTL 753
Query: 804 MPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVTPDESPMWMPSVLGLSPGAVTLTS 625
+P PGP + V+ E P P+E QSSP + T + + +PSV GLS GAV L+
Sbjct: 752 IPCPGPHLILVIVI*EFPCPIETQSSPVAICEREKYTFELRSICIPSVFGLSEGAVMLSL 573
Query: 624 LISMSLHLYMFMWKNLELSSVIPDTSPLFTKSITSELGRILQSYFLTQEFLLHTAGPCPS 445
+ SLH + KNL + +I T+ LF + +GR LQ Q P PS
Sbjct: 572 VPLKSLHSTNAI*KNLLFTELILLTTVLFIPTNFKLVGRSLQLESEVQLLNGQAKAP*PS 393
Query: 444 SFPLPVMTRLSTRRISIQLP*SLYWLRSVVA 352
+ P PV + IQ P LY+ RSV A
Sbjct: 392 NVPPPVRVKPLIHPN*IQPPPDLYFDRSVDA 300
Score = 35.4 bits (71), Expect(3) = 4e-093
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +2 / +1
Query: 257 ILIPKGDFLVGPLNFTGPC 313
++IP+G+F VG L F+GPC
Sbjct: 211 LIIPRGEFSVGSLRFSGPC 267
Score = 32.7 bits (65), Expect(3) = 4e-093
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = +2 / +1
Query: 155 DITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILI 265
D+ GA N D TKA AW AC + LI
Sbjct: 106 DVRSFGARANDHRDHTKAFVAAWDKACKSSSSSVNLI 216
Score = 24.4 bits (47), Expect(2) = 2e-035
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -2 / -2
Query: 315 LHGPVKLSGPTRKSPLGM 262
+ GP L PT SPLG+
Sbjct: 269 VQGPENLREPTENSPLGI 216
>ref|NM_128875.1| Arabidopsis thaliana polygalacturonase AT2G33160 mRNA, complete cds
Length = 1995
Score = 253 bits (547), Expect(4) = 2e-092
Identities = 102/216 (47%), Positives = 142/216 (65%)
Frame = +2 / +1
Query: 392 WIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGITLL 571
WI VDNL +TG G LDGQG W N C K +C+ L ++ FV + +++G+ +
Sbjct: 334 WILFKYVDNLTVTGGGLLDGQGSYSWPLNDCNKNTNCRTLAMNIGFAFVKSSKINGLRSI 513
Query: 572 NSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGP 751
NSK H N++ +D I V +TAPGDSPNTDGI +G SS + I N IG GDDCI+I
Sbjct: 514 NSKMGHFNLFSVEDFNITGVTITAPGDSPNTDGIKIGKSSHMQIYNVTIGTGDDCIAILD 693
Query: 752 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAYEDAASV 931
GTS ++I+ V CGPGHGIS+GSLGRYK+EK+V + V++ + T +G+RIK + + S
Sbjct: 694 GTSNLDISDVRCGPGHGISVGSLGRYKEEKNVQGLTVRNSIINGTTDGLRIKTWAKSVSQ 873
Query: 932 LTASKIHYENIKMEDSGYPIIIDMKYCPNKLCTANG 1039
++ S YENI+M + G PI+ID +YCP+ C + G
Sbjct: 874 ISVSNFLYENIQMINVGNPIVIDQQYCPHGQCDSPG 981
Score = 107 bits (229), Expect(2) = 1e-024
Identities = 58/139 (41%), Positives = 80/139 (57%)
Frame = -2 / -2
Query: 1026 HNLLGQYFMSMMMG*PESSILIFS*WILEAVSTEAASSYALMRTPLAVFLSVQSLTLISV 847
H GQY SM +G P I +FS E + ++ L+R P V L ++ LT+
Sbjct: 968 HCPCGQYC*SMTIGFPTLIIWMFSYKKFETEICDTDLAHVLIRKPSVVPLIIEFLTVKPW 789
Query: 846 TSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVTPDESPMWMP 667
T FSSLY PRLP L+P PGP +T + L VP + +QSSP P+ L + + P+ +P
Sbjct: 788 TFFSSLYLPRLPTLIPCPGPHLTSEISKLLVPSRIAIQSSPVPIVTL*ICIWLDFPILIP 609
Query: 666 SVLGLSPGAVTLTSLISMS 610
SVLGLSPGAV +T ++ S
Sbjct: 608 SVLGLSPGAVMVTPVMLKS 552
Score = 73.9 bits (155), Expect(4) = 2e-092
Identities = 30/84 (35%), Positives = 48/84 (57%)
Frame = +2 / +1
Query: 1040 ASKVTVKDVTFKNITGTSSTPEAVNLLCSAKIPCTGVTMDDVNIKYSGTNNKTMAVCKNA 1219
AS V +KDV + NI GTS++ EA+ + CS PC V + ++N+ Y G + A+C+N
Sbjct: 988 ASHVQIKDVKYNNIWGTSTSKEALKMQCSKTFPCQDVELSNINLHYVGRDGLVTALCENV 1167
Query: 1220 KGSAKGCLKELACF*NHHRPISLV 1291
GS +G + C N P +++
Sbjct: 1168 GGSIRGKIVPANCRINLFLPSNII 1239
Score = 45.5 bits (93), Expect(4) = 2e-092
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +2 / +1
Query: 245 GKQTILIPKGDFLVGPLNFTGPCKGDVTIQVNGNLLA 355
G+ T+ IP G F + + F+GPCK +T + G LLA
Sbjct: 190 GRSTVYIPSGIFYLRQVTFSGPCKSSITFFIRGTLLA 300
Score = 29.0 bits (57), Expect(2) = 1e-024
Identities = 19/48 (39%), Positives = 22/48 (45%)
Frame = -2 / -2
Query: 537 TKSITSELGRILQSYFLTQEFLLHTAGPCPSSFPLPVMTRLSTRRISI 394
TK+ + + Q FL Q P PSS P PV RLST SI
Sbjct: 479 TKANPMFIASVRQLVFLLQSLRGQE*DP*PSSNPPPVTVRLSTYLKSI 336
Score = 28.6 bits (56), Expect(4) = 2e-092
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +2 / +1
Query: 152 FDITKLGASGNGKTDSTKAVQEAWASAC 235
FD+ GA + + D+ A +AW AC
Sbjct: 94 FDVRNYGARADSQRDNAFAFTKAWNEAC 177
>ref|NM_106487.2| Arabidopsis thaliana polygalacturonase AT1G78400 mRNA, complete cds
Length = 1215
Score = 282 bits (610), Expect(2) = 2e-092
Identities = 119/290 (41%), Positives = 172/290 (59%)
Frame = +2 / +1
Query: 389 NWIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGITL 568
+WI VD L ++G G LDGQG W N+C + ++C+ LP ++ FV ++ I
Sbjct: 337 SWIIFRYVDYLTVSGGGILDGQGSYSWPLNNCRQTHNCRALPMNMGFQFVRFSRLTRIKS 516
Query: 569 LNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIG 748
+NSK H+N + + I VN+ APGDSPNTDGI +G S+ + I + I GDDCI+I
Sbjct: 517 INSKMGHLNFFSVQHFDITRVNIKAPGDSPNTDGIKIGSSNHMKIHHVDIATGDDCIAIL 696
Query: 749 PGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAYEDAAS 928
GT ++I V CGPGHGIS+GSLG++K EK V + V++ T+NGVRIK +
Sbjct: 697 SGTFNLDINKVNCGPGHGISVGSLGKFKGEKSVQGLIVRNSIFNGTSNGVRIKTWPSPGE 876
Query: 929 VLTASKIHYENIKMEDSGYPIIIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEA 1108
S ++N++M D PI ID +YCPN C+ SK+ ++DV F+NI GTS+ EA
Sbjct: 877 PNLVSNFLFKNLQMIDVQSPINIDQRYCPNPPCSFQSFSKIQIRDVKFQNIWGTSTAKEA 1056
Query: 1109 VNLLCSAKIPCTGVTMDDVNIKYSGTNNKTMAVCKNAKGSAKGCLKELAC 1258
V L CS +PC V + ++NI + G + +VC+N G G + +C
Sbjct: 1057 VKLQCSKNVPCKNVQLFNINIVHRGRDGPATSVCENVGGWIGGKISPPSC 1206
Score = 106 bits (227), Expect(4) = 2e-036
Identities = 49/99 (49%), Positives = 67/99 (67%)
Frame = -2 / -2
Query: 912 YALMRTPLAVFLSVQSLTLISVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQ 733
+ L+RTPL V L ++ LT+ T FS L PRLP L+PWPGPQ+T ++ L+VP + MQ
Sbjct: 860 HVLIRTPLLVPLKIEFLTINP*TLFSPLNFPRLPTLIPWPGPQLTLLISKLKVPDKIAMQ 681
Query: 732 SSPTPMTVLVMVTPDESPMWMPSVLGLSPGAVTLTSLIS 616
SSP M+ + + P+ +PSVLGLSPGA+ LT +IS
Sbjct: 680 SSPVAMSTWWIFMWFDEPILIPSVLGLSPGALMLTRVIS 564
Score = 81.3 bits (171), Expect(2) = 2e-092
Identities = 33/76 (43%), Positives = 44/76 (57%)
Frame = +2 / +1
Query: 152 FDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCKGDVTI 331
FD+ GA G+GKTD+T A +AW AC G + IP G F +G + FTGPCK ++
Sbjct: 103 FDVRSYGARGDGKTDNTMAFTKAWKDACQWKGLPRVYIPFGTFYLGAVAFTGPCKSRISF 282
Query: 332 QVNGNLLATTDLSQYK 379
+ G LLA D + K
Sbjct: 283 IIKGTLLAPKDPNAIK 330
Score = 55.6 bits (115), Expect(4) = 2e-036
Identities = 31/73 (42%), Positives = 38/73 (52%)
Frame = -2 / -2
Query: 369 LRSVVASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIVCFPVPPHADAHASCTAFVLSV 190
L S A+++P + LHGPVK + P K P G+ + P A HA A VLSV
Sbjct: 320 LGSFGANKVPLMMKLIRLLHGPVKATAPR*KVPNGIYTLGNPFHWQASFHAFVNAIVLSV 141
Query: 189 LPLPEAPNLVMSK 151
LP P AP L SK
Sbjct: 140 LPSPRAP*LRTSK 102
Score = 33.6 bits (67), Expect(4) = 2e-036
Identities = 20/55 (36%), Positives = 25/55 (45%)
Frame = -2 / -2
Query: 1149 TPVHGILAEQSRLTASGVEEVPVMFLKVTSLTVTLEAPLAVHNLLGQYFMSMMMG 985
T + G TAS +VP MF TSL E +H GQY SM++G
Sbjct: 1097 TFLQGTFLLHCNFTASLAVDVPQMFWNFTSLI*IFEKD*KLHGGFGQYR*SMLIG 933
Score = 24.9 bits (48), Expect(4) = 2e-036
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2 / -2
Query: 456 PCPSSFPLPVMTRLSTRRISIQL 388
PCPS P P R ST IQL
Sbjct: 404 PCPSRMPPPETVR*STYLKIIQL 336
>ref|NM_101576.1| Arabidopsis thaliana polygalacturonase AT1G17150 mRNA, complete cds
Length = 1209
Score = 284 bits (614), Expect(2) = 8e-092
Identities = 123/282 (43%), Positives = 165/282 (58%)
Frame = +2 / +1
Query: 392 WIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGITLL 571
WI ++ L + G G LDGQG WS C K +C L ++ DFV N ++GIT L
Sbjct: 334 WINFRYINYLTVFGDGTLDGQGKKSWSLIDCQKDNNCPKLAINMGFDFVKNSSMNGITSL 513
Query: 572 NSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGP 751
NSK H N I VN+ AP +SPNTDGI + SS + I+NT I GDDCI++
Sbjct: 514 NSKAGHFNFLSVDHFSITRVNIIAPSNSPNTDGIKIALSSNMQISNTHISTGDDCIAMLS 693
Query: 752 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAYEDAASV 931
G + +I V CGPGHGISIGSLG+ KDEK+V + V++ T NG+RIK +E +AS
Sbjct: 694 GNTNFDIYNVKCGPGHGISIGSLGKNKDEKNVNGLMVRNSVFTGTTNGIRIKTWESSAST 873
Query: 932 LTASKIHYENIKMEDSGYPIIIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAV 1111
+ + YEN++M + PI ID KYCP C+ G S + +++VT KNI GTS AV
Sbjct: 874 IRIINLVYENLQMINVENPIGIDQKYCPYPPCSNMGDSHIQIRNVTLKNIWGTSKNKVAV 1053
Query: 1112 NLLCSAKIPCTGVTMDDVNIKYSGTNNKTMAVCKNAKGSAKG 1237
CS PC V + D+N+ + G + A+C+N GSA G
Sbjct: 1054 KFQCSKTFPCKDVQLIDINLTHHGVDGPASALCENVDGSATG 1179
Score = 106 bits (227), Expect(3) = 4e-034
Identities = 65/174 (37%), Positives = 92/174 (52%)
Frame = -2 / -2
Query: 1149 TPVHGILAEQSRLTASGVEEVPVMFLKVTSLTVTLEAPLAVHNLLGQYFMSMMMG*PESS 970
T + G + TA+ +VP MF VT E+P+ +H GQYF SM +G
Sbjct: 1091 TSLQGKVLLH*NFTATLFFDVPQMFFSVTFRI*M*ESPILLHGG*GQYF*SMPIGFSTFI 912
Query: 969 ILIFS*WILEAVSTEAASSYALMRTPLAVFLSVQSLTLISVTSFSSLYRPRLPMLMPWPG 790
I FS L EA S+ L+R PL V + + LT+ +T FSSL+ P+LP+L+P PG
Sbjct: 911 ICRFSYTKLIIRIVEAEDSHVLIRIPLVVPVKTEFLTIKPLTFFSSLFFPKLPILIPCPG 732
Query: 789 PQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVTPDESPMWMPSVLGLSPGAVTLT 628
P +T + P + +QSSP M V + + + +PSVLGL GA+ LT
Sbjct: 731 PHLTL*ISKFVFPESIAIQSSPVLM*VFEICMLLDKAILIPSVLGLLLGAIMLT 570
Score = 77.1 bits (162), Expect(2) = 8e-092
Identities = 29/68 (42%), Positives = 39/68 (57%)
Frame = +2 / +1
Query: 152 FDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCKGDVTI 331
FD+ GA G+GK D+T A AW AC G + IP G F +G + F GPC G ++
Sbjct: 97 FDVRSYGAKGDGKMDNTNAFTNAWKDACRWNGPSKMYIPLGTFYLGGVTFVGPCDGKISF 276
Query: 332 QVNGNLLA 355
++G LLA
Sbjct: 277 VIDGTLLA 300
Score = 51.9 bits (107), Expect(3) = 4e-034
Identities = 25/62 (40%), Positives = 32/62 (51%)
Frame = -2 / -2
Query: 354 ASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIVCFPVPPHADAHASCTAFVLSVLPLPE 175
A+++P P HGP ++ P P GM I+ P HA HA A VLS+LP P
Sbjct: 299 ANKVPSMTNEILPSHGPTNVTPPR*NVPSGMYILLGPFHLHASFHAFVNALVLSILPSPL 120
Query: 174 AP 169
AP
Sbjct: 119 AP 114
Score = 27.6 bits (54), Expect(3) = 4e-034
Identities = 19/54 (35%), Positives = 21/54 (38%)
Frame = -2 / -2
Query: 579 LELSSVIPDTSPLFTKSITSELGRILQSYFLTQEFLLHTAGPCPSSFPLPVMTR 418
L LS VIP FTKS + + Q Q H P PS P P R
Sbjct: 521 LLLSDVIPFMLEFFTKSNPIFIASLGQLLSFWQSISDHDFFPWPSRVPSPKTVR 360
>gb|AC013483.7|ATAC013483 Arabidopsis thaliana chromosome III BAC F17A17 genomic sequence,
complete sequence
Length = 121054
Score = 220 bits (474), Expect(4) = 2e-080
Identities = 89/174 (51%), Positives = 118/174 (67%)
Frame = +2 / -1
Query: 506 ILPNSLVMDFVNNGEVSGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGD 685
+L S+ DFV N E+ I+ +++K FH+N+ K+M +V V AP +SPNTDGIH+G
Sbjct: 53923 LLLQSIRFDFVENAEIRDISSIDAKNFHINVLGAKNMTFDNVKVIAPAESPNTDGIHLGR 53744
Query: 686 SSGVTITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVK 865
S GV I N+ I GDDCIS+G G +++ V CGPGHGIS+GSLGRY E+DVT I V
Sbjct: 53743 SEGVKILNSKIATGDDCISVGDGMKNLHVENVMCGPGHGISVGSLGRYVHEQDVTGITVV 53564
Query: 866 DCTLKKTANGVRIKAYEDAASVLTASKIHYENIKMEDSGYPIIIDMKYCPNKLC 1027
+CTL+ T NG+RIK + AA TAS IH+ENI + + PI+ID +YCP C
Sbjct: 53563 NCTLQGTDNGLRIKTWPSAACATTASGIHFENIILNNVSNPILIDQEYCPWNQC 53402
Score = 219 bits (473), Expect(4) = 7e-091
Identities = 86/170 (50%), Positives = 120/170 (70%)
Frame = +2 / -3
Query: 518 SLVMDFVNNGEVSGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGV 697
S+ DF+ N E+ I+ +++K FH+N+ K+M + ++ + AP DSPNTDGIH+G S GV
Sbjct: 48470 SIRFDFILNSEIRDISSIDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGV 48291
Query: 698 TITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTL 877
I N+ I GDDCIS+G G +++ VTCGPGHGIS+GSLGRY E+DV+ I V +CTL
Sbjct: 48290 KILNSFISTGDDCISVGDGMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTL 48111
Query: 878 KKTANGVRIKAYEDAASVLTASKIHYENIKMEDSGYPIIIDMKYCPNKLC 1027
++T NG+RIK + AA TAS IH+E+I ++D PI+ID +YCP C
Sbjct: 48110 QETDNGLRIKTWPSAACSTTASDIHFEDIILKDVSNPILIDQEYCPWNQC 47961
Score = 214 bits (461), Expect(4) = 8e-078
Identities = 85/170 (50%), Positives = 117/170 (68%)
Frame = +2 / -3
Query: 518 SLVMDFVNNGEVSGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGV 697
S+ DFV N E+ I+ +++K FH+N+ K+M +V + AP +SPNTDGIH+G S GV
Sbjct: 51380 SIRFDFVTNAEIRDISSIDAKNFHINVIGAKNMTFDNVKIMAPAESPNTDGIHLGRSVGV 51201
Query: 698 TITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTL 877
+I N+ I GDDC+S+G G + + V CGPGHGIS+GSLGRY E+DV+ I V +CTL
Sbjct: 51200 SIINSRISTGDDCVSVGDGMVNLLVKNVVCGPGHGISVGSLGRYGHEQDVSGIRVINCTL 51021
Query: 878 KKTANGVRIKAYEDAASVLTASKIHYENIKMEDSGYPIIIDMKYCPNKLC 1027
++T NG+RIK + AA TAS IH+ENI + + PI+ID +YCP C
Sbjct: 51020 QETDNGLRIKTWPSAACSTTASNIHFENIILRNVSNPILIDQEYCPWNQC 50871
Score = 168 bits (362), Expect(2) = 3e-053
Identities = 64/126 (50%), Positives = 87/126 (69%)
Frame = +2 / -2
Query: 536 VNNGEVSGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTV 715
+ N +++ IT NSK FHMN+ CK++ + D+ + AP +S NTDGIH+G S+GV +
Sbjct: 57696 LTNSKINSITSTNSKLFHMNILNCKNITLSDIGIDAPPESLNTDGIHIGRSNGVNLIGAK 57517
Query: 716 IGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTANG 895
I GDDC+SIG GT + + V CGPGHGISIGSLGRY +E+ V + V+ C +K T NG
Sbjct: 57516 IKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNG 57337
Query: 896 VRIKAY 913
VRIK +
Sbjct: 57336 VRIKTW 57319
Score = 133 bits (286), Expect(3) = 5e-032
Identities = 73/167 (43%), Positives = 94/167 (56%)
Frame = -2 / +3
Query: 1029 VHNLLGQYFMSMMMG*PESSILIFS*WILEAVSTEAASSYALMRTPLAVFLSVQSLTLIS 850
+H GQY SM +G ++FS I EAV +AA + L+ +PL+V VQ T++
Sbjct: 53400 LHWFQGQYSWSMRIGLLTLLRMMFSK*IPEAVVAQAADGHVLILSPLSVP*RVQFTTVMP 53579
Query: 849 VTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVTPDESPMWM 670
VTS S Y PRLP L+P PGP +T + +P P EMQSSP + L ++TP P W+
Sbjct: 53580 VTSCSCTYLPRLPTLIPCPGPHITFSTWRFFIPSPTEMQSSPVAILELRILTPSLLPKWI 53759
Query: 669 PSVLGLSPGAVTLTSLISMSLHLYMFMWKNLELSSVIPDTSPLFTKS 529
PSVLGLS GA+TLT M L FMWK L + S TKS
Sbjct: 53760 PSVLGLSAGAMTLTLSKVMFLAPRTFMWKFLASIEDMSLISAFSTKS 53900
Score = 125 bits (268), Expect(2) = 2e-027
Identities = 72/167 (43%), Positives = 89/167 (53%)
Frame = -2 / +1
Query: 1029 VHNLLGQYFMSMMMG*PESSILIFS*WILEAVSTEAASSYALMRTPLAVFLSVQSLTLIS 850
+H GQY SM +G +IFS ILEAV +AA L+ PL+V VQ +TL+
Sbjct: 50869 LHWFQGQYSWSMRIGLLTFLRMIFSK*ILEAVVEQAAEGQVLILRPLSVSWRVQLMTLMP 51048
Query: 849 VTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVTPDESPMWM 670
+TS S Y PRLP L+P PGP T + +P P E QSSP + L+M TP P W+
Sbjct: 51049 LTSCSCPYLPRLPTLIPCPGPHTTFLTRRFTIPSPTETQSSPVEILELIMETPTLLPKWI 51228
Query: 669 PSVLGLSPGAVTLTSLISMSLHLYMFMWKNLELSSVIPDTSPLFTKS 529
PSVLGLS GA+ LT M L M K L + S TKS
Sbjct: 51229 PSVLGLSAGAMILTLSKVMFLAPITLM*KFLASIEDMSLISAFVTKS 51369
Score = 125 bits (267), Expect(2) = 2e-027
Identities = 67/151 (44%), Positives = 85/151 (56%)
Frame = -2 / +1
Query: 1029 VHNLLGQYFMSMMMG*PESSILIFS*WILEAVSTEAASSYALMRTPLAVFLSVQSLTLIS 850
+H GQY SM +G S +I S I +AV +AA + L+ PL+V VQ +TL+
Sbjct: 47959 LHWFQGQYSWSMRIGLLTSLRIISSK*ISDAVVEQAAEGHVLILNPLSVS*RVQLMTLMP 48138
Query: 849 VTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVTPDESPMWM 670
+TS S Y PRLP L+P PGP VT +P P E+QSSP M L ++TP P W+
Sbjct: 48139 LTSCSCPYLPRLPTLIPCPGPHVTFST*RFFIPSPTEIQSSPVEMKELRILTPSLLPKWI 48318
Query: 669 PSVLGLSPGAVTLTSLISMSLHLYMFMWKNL 577
PSVLGLS GA L + M L MWK L
Sbjct: 48319 PSVLGLSSGATILMLFMVMFLAPNTLMWKFL 48411
Score = 115 bits (246), Expect = 3e-024
Identities = 58/118 (49%), Positives = 68/118 (57%)
Frame = -2 / +2
Query: 912 YALMRTPLAVFLSVQSLTLISVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQ 733
+ LMRTPL+VFL LT+ T S Y PRLPM +P PGP T VP PME Q
Sbjct: 57320 HVLMRTPLSVFLMRHFLTVTPFTGCSLGYLPRLPMEIPCPGPHSTFSTMRFSVPSPMETQ 57499
Query: 732 SSPTPMTVLVMVTPDESPMWMPSVLGLSPGAVTLTSLISMSLHLYMFMWKNLELSSVI 559
SSP + + +TP + PMW+PSVL LS GA S M L L MFMWK+L VI
Sbjct: 57500 SSPVLIFAPIKLTPLDLPMWIPSVLRLSGGASIPISERVMFLQLRMFMWKSLLFVDVI 57673
Score = 74.8 bits (157), Expect(2) = 3e-053
Identities = 29/72 (40%), Positives = 42/72 (58%)
Frame = +2 / -1
Query: 1043 SKVTVKDVTFKNITGTSSTPEAVNLLCSAKIPCTGVTMDDVNIKYSGTNNKTMAVCKNAK 1222
S+V + DVT K I GTS+T AV L+CS +PCT + + D+N+ ++G ++ C N K
Sbjct: 57085 SQVKLSDVTIKGIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIK 56906
Query: 1223 GSAKGCLKELAC 1258
G L AC
Sbjct: 56905 PILSGKLVPAAC 56870
Score = 71.2 bits (149), Expect(4) = 7e-091
Identities = 29/79 (36%), Positives = 41/79 (51%)
Frame = +2 / -1
Query: 1022 LCTANGASKVTVKDVTFKNITGTSSTPEAVNLLCSAKIPCTGVTMDDVNIKYSGTNNKTM 1201
+C AS + + +++FKNI GTS +AV LLCS PC V + D++IKY+G +
Sbjct: 47881 ICDLQKASTIKLVNISFKNIRGTSGNKDAVKLLCSKGYPCQNVEIGDIDIKYNGADGPAT 47702
Query: 1202 AVCKNAKGSAKGCLKELAC 1258
C N G AC
Sbjct: 47701 FHCSNVSPKILGSQSPKAC 47645
Score = 68.9 bits (144), Expect(4) = 8e-078
Identities = 24/60 (40%), Positives = 36/60 (60%)
Frame = +2 / -3
Query: 254 TILIPKGDFLVGPLNFTGPCKGDVTIQVNGNLLATTDLSQYKDHGNWIEILRVDNLVITG 433
TI +PKG+++V L F GPCKG VT+++NGN A + K H WI+ + + + G
Sbjct: 58070 TITVPKGEYMVESLEFKGPCKGPVTLELNGNFKAPATVKTTKPHAGWIDFENIADFTLNG 57891
Score = 66.6 bits (139), Expect(4) = 2e-080
Identities = 26/72 (36%), Positives = 38/72 (52%)
Frame = +2 / -3
Query: 1043 SKVTVKDVTFKNITGTSSTPEAVNLLCSAKIPCTGVTMDDVNIKYSGTNNKTMAVCKNAK 1222
S + + D++FKNI GTS +AV LLCS PC V + ++N++Y G + +C N
Sbjct: 53183 STIKLVDISFKNIRGTSGNKDAVKLLCSKAHPCANVEIGNINLEYKGADGPPTFMCSNVS 53004
Query: 1223 GSAKGCLKELAC 1258
G AC
Sbjct: 53003 PKLVGTQNPKAC 52968
Score = 65.2 bits (136), Expect(4) = 8e-078
Identities = 25/73 (34%), Positives = 40/73 (54%)
Frame = +2 / -3
Query: 1040 ASKVTVKDVTFKNITGTSSTPEAVNLLCSAKIPCTGVTMDDVNIKYSGTNNKTMAVCKNA 1219
+S + + +++F+ I GTS +AV LLCS PC V + D+NI+Y+G + +C N
Sbjct: 50735 SSSIKLANISFRRIRGTSGNKDAVKLLCSKGYPCENVQVGDINIQYTGADGPATFMCSNV 50556
Query: 1220 KGSAKGCLKELAC 1258
+ G AC
Sbjct: 50555 RPKLVGTQFPKAC 50517
Score = 63.8 bits (133), Expect(5) = 3e-035
Identities = 28/70 (40%), Positives = 39/70 (55%)
Frame = +2 / +3
Query: 1043 SKVTVKDVTFKNITGTSSTPEAVNLLCSAKIPCTGVTMDDVNIKYSGTNNKTMAVCKNAK 1222
S V V +V +KNI GTSS P AV +CS IPC G++M +V + + + A C N K
Sbjct: 94182 SAVQVSNVLYKNIQGTSSRPIAVKFVCSKNIPCRGISMQNVKLVDQTQQDVSKASCSNVK 94361
Query: 1223 GSAKGCLKEL 1252
+G + L
Sbjct: 94362 LDTRGNVSPL 94391
Score = 62.9 bits (131), Expect(5) = 3e-035
Identities = 24/63 (38%), Positives = 39/63 (61%)
Frame = +2 / +3
Query: 539 NNGEVSGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVI 718
NN VS I L N++ H+ CK++ ++ VT+P DSPNTDGIH+ + + I ++++
Sbjct: 93015 NNLRVSNIRLENAQQMHLTFQDCKNVKALNLMVTSPADSPNTDGIHVSGTQNILIQDSIV 93194
Query: 719 GVG 727
G
Sbjct: 93195 RTG 93203
Score = 56.5 bits (117), Expect(4) = 7e-091
Identities = 21/64 (32%), Positives = 37/64 (57%)
Frame = +2 / -2
Query: 191 TDSTKAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCKGDVTIQVNGNLLATTDLS 370
TD +A+ +A+ SAC + ++IPKG+F +G + GPCK + + + G + A +
Sbjct: 48867 TDDMQALLKAFTSACQSSSPSKVVIPKGEFKLGEIEMRGPCKAPIEVTLQGTVKADGNAI 48688
Query: 371 QYKD 382
Q K+
Sbjct: 48687 QGKE 48676
Score = 53.3 bits (110), Expect(5) = 3e-035
Identities = 19/27 (70%), Positives = 21/27 (77%)
Frame = +2 / +1
Query: 725 GDDCISIGPGTSKVNITGVTCGPGHGI 805
GDDCISI G+ V TG+TCGPGHGI
Sbjct: 93343 GDDCISIVSGSENVRATGITCGPGHGI 93423
Score = 52.4 bits (108), Expect(4) = 2e-080
Identities = 23/62 (37%), Positives = 34/62 (54%)
Frame = +2 / -3
Query: 197 STKAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCKGDVTIQVNGNLLATTDLSQY 376
S +A+ +A+ SAC ++I KG+F +G + TGPCK V I + G L A Q
Sbjct: 54323 SLQALLKAFTSACQAPTASKVVITKGEFKLGEIEMTGPCKAPVEINLQGTLKADGKAIQG 54144
Query: 377 KD 382
K+
Sbjct: 54143 KE 54138
Score = 51.5 bits (106), Expect(4) = 2e-080
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +2 / -3
Query: 392 WIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILP 514
W+ LR++ + G G DG+G A W N+C K ++CK LP
Sbjct: 54134 WVVFLRINGFKLNGGGIFDGEGNAAWRVNNCHKTFECKKLP 54012
Score = 48.7 bits (100), Expect(4) = 7e-091
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +2 / -2
Query: 392 WIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILP 514
W+ +D + G G DG+G A W N+C K ++CK LP
Sbjct: 48672 WVVFGNIDGFKLNGGGAFDGEGNAAWRVNNCHKTFECKKLP 48550
Score = 43.2 bits (88), Expect(5) = 3e-035
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +2 / +3
Query: 335 VNGNLLATTDLSQYKDHGNWIEILRVDNLVITGKGKLDGQGPAVWSKN 478
+ G + A + S YK+ +WI V+NL + G G++DG G W K+
Sbjct: 92601 IYGRIEAWENPSDYKERRHWIVFENVNNLRVEGGGRIDGNGHIWWPKS 92744
Score = 38.6 bits (78), Expect(5) = 3e-035
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +2 / +3
Query: 806 SIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAYE 916
SIGSLG E V+++ V TL T NGVRIK ++
Sbjct: 93756 SIGSLGEDNSEAYVSNVVVNKATLIGTTNGVRIKTWQ 93866
Score = 35.9 bits (72), Expect(3) = 5e-032
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = -2 / +1
Query: 354 ASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIV 253
A +LPF VT PLHGP+ T SP G IV
Sbjct: 57970 ALKLPFNSKVTGPLHGPLNSRLSTIYSPFGTVIV 58071
Score = 33.1 bits (66), Expect(4) = 8e-078
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2 / -3
Query: 434 KGKLDGQGPAVWSKNSCVKKYDCKILP 514
K DGQG W N C K C LP
Sbjct: 57887 KAIFDGQGSLAWKANDCAKTGKCNSLP 57807
Score = 31.8 bits (63), Expect(2) = 2e-027
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = -2 / +2
Query: 381 SLYWLRSVVASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIVCFPVPPHADAHASCTAF 202
S W+ A +P LHGP+ P+ SP G+ + HAD +A +A
Sbjct: 48677 SFPWIALPSALTVP*RVTSMGALHGPLISISPSLNSPFGITTLLGDEDWHADVNAFRSAC 48856
Query: 201 VLSV 190
+ SV
Sbjct: 48857 ISSV 48868
Score = 31.3 bits (62), Expect(2) = 2e-027
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2 / +1
Query: 381 SLYWLRSVVASRLPFTWMVTSPLHGPVKLSGPTRKSP 271
S W+ A R+P+ + T LHGPV P+ SP
Sbjct: 54139 SFPWIAFPSALRVPWRLISTGALHGPVISISPSLNSP 54249
Score = 29.9 bits (59), Expect(3) = 5e-032
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -2 / +3
Query: 1140 HGILAEQSRLTASGVEEVPVMFLKVTSLTVTLEA 1039
HG QS TAS +VP+MFLK+ + ++A
Sbjct: 47763 HGYPLLQSSFTASLFPDVPLMFLKLMFTNLIVDA 47864
>emb|AJ003135.1|ATAJ3135 Arabidopsis thaliana PGA5 gene, complete CDS
Length = 2556
Score = 219 bits (472), Expect(4) = 1e-090
Identities = 85/170 (50%), Positives = 120/170 (70%)
Frame = +2 / +3
Query: 518 SLVMDFVNNGEVSGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGV 697
S+ DF+ N E+ I+ +++K FH+N+ K+M + ++ + AP DSPNTDGIH+G S G+
Sbjct: 1548 SIRFDFILNSEIRDISSIDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGI 1727
Query: 698 TITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTL 877
I N+ I GDDCIS+G G +++ VTCGPGHGIS+GSLGRY E+DV+ I V +CTL
Sbjct: 1728 KILNSFISTGDDCISVGDGMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTL 1907
Query: 878 KKTANGVRIKAYEDAASVLTASKIHYENIKMEDSGYPIIIDMKYCPNKLC 1027
++T NG+RIK + AA TAS IH+E+I ++D PI+ID +YCP C
Sbjct: 1908 QETDNGLRIKTWPSAACSTTASDIHFEDIILKDVSNPILIDQEYCPWNQC 2057
Score = 122 bits (261), Expect(3) = 1e-030
Identities = 66/151 (43%), Positives = 84/151 (55%)
Frame = -2 / -3
Query: 1029 VHNLLGQYFMSMMMG*PESSILIFS*WILEAVSTEAASSYALMRTPLAVFLSVQSLTLIS 850
+H GQY SM +G S +I S I +AV +AA + L+ PL+V VQ +TL+
Sbjct: 2059 LHWFQGQYSWSMRIGLLTSLRIISSK*ISDAVVEQAAEGHVLILNPLSVS*RVQLMTLMP 1880
Query: 849 VTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVTPDESPMWM 670
+TS S Y PRLP L+P PGP VT +P P E+QSSP M L ++ P P W+
Sbjct: 1879 LTSCSCPYLPRLPTLIPCPGPHVTFST*RFFIPSPTEIQSSPVEMKELRILIPSLLPKWI 1700
Query: 669 PSVLGLSPGAVTLTSLISMSLHLYMFMWKNL 577
PSVLGLS GA L + M L MWK L
Sbjct: 1699 PSVLGLSSGATILMLFMVMFLAPNTLMWKFL 1607
Score = 71.2 bits (149), Expect(4) = 1e-090
Identities = 29/79 (36%), Positives = 41/79 (51%)
Frame = +2 / +1
Query: 1022 LCTANGASKVTVKDVTFKNITGTSSTPEAVNLLCSAKIPCTGVTMDDVNIKYSGTNNKTM 1201
+C AS + + +++FKNI GTS +AV LLCS PC V + D++IKY+G +
Sbjct: 2137 ICDLQKASTIKLVNISFKNIRGTSGNKDAVKLLCSKGYPCQNVEIGDIDIKYNGADGPAT 2316
Query: 1202 AVCKNAKGSAKGCLKELAC 1258
C N G AC
Sbjct: 2317 FHCSNVSPKILGSQSPKAC 2373
Score = 56.5 bits (117), Expect(4) = 1e-090
Identities = 21/64 (32%), Positives = 37/64 (57%)
Frame = +2 / +2
Query: 191 TDSTKAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCKGDVTIQVNGNLLATTDLS 370
TD +A+ +A+ SAC + ++IPKG+F +G + GPCK + + + G + A +
Sbjct: 1151 TDDMQALLKAFTSACQSSSPSKVVIPKGEFKLGEIEMRGPCKAPIEVTLQGTVKADGNAI 1330
Query: 371 QYKD 382
Q K+
Sbjct: 1331 QGKE 1342
Score = 48.7 bits (100), Expect(4) = 1e-090
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +2 / +2
Query: 392 WIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILP 514
W+ +D + G G DG+G A W N+C K ++CK LP
Sbjct: 1346 WVVFGNIDGFKLNGGGAFDGEGNAAWRVNNCHKTFECKKLP 1468
Score = 31.8 bits (63), Expect(3) = 1e-030
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = -2 / -1
Query: 381 SLYWLRSVVASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIVCFPVPPHADAHASCTAF 202
S W+ A +P LHGP+ P+ SP G+ + HAD +A +A
Sbjct: 1341 SFPWIALPSALTVP*RVTSMGALHGPLISISPSLNSPFGITTLLGDEDWHADVNAFRSAC 1162
Query: 201 VLSV 190
+ SV
Sbjct: 1161 ISSV 1150
Score = 29.9 bits (59), Expect(3) = 1e-030
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -2 / -2
Query: 1140 HGILAEQSRLTASGVEEVPVMFLKVTSLTVTLEA 1039
HG QS TAS +VP+MFLK+ + ++A
Sbjct: 2255 HGYPLLQSSFTASLFPDVPLMFLKLMFTNLIVDA 2154
>ref|NM_128219.1| Arabidopsis thaliana polygalacturonase AT2G26620 mRNA, complete cds
Length = 1209
Score = 311 bits (673), Expect(2) = 1e-090
Identities = 132/264 (50%), Positives = 165/264 (62%)
Frame = +2 / +1
Query: 392 WIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGITLL 571
WI ++NL I+G G LDGQG W N C K +C L S+ FVNN + IT L
Sbjct: 331 WINFRYINNLSISGSGTLDGQGKQSWPLNDCHKNPNCPKLAISMGFAFVNNSNIKDITSL 510
Query: 572 NSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGP 751
NSK H N + I V +TAP DSPNTDGI MG S + I+NT IG GDDCI+I
Sbjct: 511 NSKMGHFNFFFVHHFNITGVTITAPSDSPNTDGIKMGSCSNIQISNTNIGTGDDCIAILS 690
Query: 752 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAYEDAASV 931
GT+K+NI+ + CGPGHGIS+GSLG+ KDEKDV D+ V+D T++G+RIK +E +AS
Sbjct: 691 GTTKLNISNINCGPGHGISVGSLGKNKDEKDVKDLFVRDVIFNGTSDGIRIKTWESSASK 870
Query: 932 LTASKIHYENIKMEDSGYPIIIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAV 1111
+ S YENI+M D G PI ID KYCP+ C S V ++D+ KNI GTS AV
Sbjct: 871 ILVSNFVYENIQMIDVGKPINIDQKYCPHPPCEHERKSHVQIQDLKLKNIYGTSKNKVAV 1050
Query: 1112 NLLCSAKIPCTGVTMDDVNIKYSG 1183
NL CS PC V + D+NIK +G
Sbjct: 1051 NLQCSKSFPCKNVELIDINIKQNG 1122
Score = 118 bits (252), Expect(3) = 1e-027
Identities = 64/132 (48%), Positives = 82/132 (62%)
Frame = -2 / -2
Query: 1014 GQYFMSMMMG*PESSILIFS*WILEAVSTEAASSYALMRTPLAVFLSVQSLTLISVTSFS 835
GQYF SM++G P S I IFS E EA S L+R P V L + SLT S TSFS
Sbjct: 953 GQYF*SMLIGFPTSII*IFSYTKFETRIFEADDSQVLIRIPSLVPLKMTSLTNKSFTSFS 774
Query: 834 SLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVTPDESPMWMPSVLG 655
SL+ P+LP L+P PGPQ+ + +L VP + +QSSP PM VL + P+ +PSVLG
Sbjct: 773 SLFFPKLPTLIPCPGPQLMLEILSLVVPERIAIQSSPVPMFVLEI*MLLHEPILIPSVLG 594
Query: 654 LSPGAVTLTSLI 619
LS GAV +T ++
Sbjct: 593 LSLGAVIVTPVM 558
Score = 46.4 bits (95), Expect(2) = 1e-090
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +2 / +1
Query: 242 TGKQTILIPKGDFLVGPLNFTGPCKGDVTIQVNGNLLATTDLSQYK 379
+G I +PKG F +G + F GPCK + ++G LLA + + K
Sbjct: 184 SGSSKIYVPKGTFYLGGVEFVGPCKNPIEFIIDGTLLAPANPNDIK 321
Score = 24.0 bits (46), Expect(3) = 1e-027
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = -2 / -2
Query: 543 LFTKSITSELGRILQSYFLTQEFLLHTAGPCPSSFPLPVMTRL 415
LFT + + + Q FL Q P PSS P P + RL
Sbjct: 482 LFTNANPILIASLGQLGFLWQSLSGQDCFPWPSSVPEPEIERL 354
Score = 22.1 bits (42), Expect(3) = 1e-027
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -2 / -2
Query: 315 LHGPVKLSGPTRKSPLGMRIVCFPV 241
LHGP + P P G I+ P+
Sbjct: 257 LHGPTNSTPPR*NVPFGT*ILLLPL 183
>emb|BX822574.1|CNS0A73L Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB4ZD01 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1339
Score = 303 bits (655), Expect(2) = 4e-090
Identities = 122/282 (43%), Positives = 173/282 (61%)
Frame = +2 / +3
Query: 392 WIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGITLL 571
W+ R+D + G G DG+G A W N+C K ++CK LP S+ DFV N E+ I+ +
Sbjct: 360 WVVFQRMDGFRLNGGGTFDGEGNAAWRVNNCHKTFECKKLPISIRFDFVTNAEIRDISSI 539
Query: 572 NSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGP 751
++K FH+N+ K+M +V + AP +SPNTDGIH+G S GV+I N+ I GDDC+S+G
Sbjct: 540 DAKNFHINVIGAKNMTFDNVKIMAPAESPNTDGIHLGRSVGVSIINSRISTGDDCVSVGD 719
Query: 752 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAYEDAASV 931
G + + V CGPGHGIS+GSLGRY E+DV+ I V +CT ++T NG+RIK + AA
Sbjct: 720 GMVNLLVKNVVCGPGHGISVGSLGRYGHEQDVSGIRVINCTPQETDNGLRIKTWPSAACS 899
Query: 932 LTASKIHYENIKMEDSGYPIIIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAV 1111
TAS IH+ENI + + PI+ID +YCP C +S + + D+ F+ I GTS +AV
Sbjct: 900 TTASNIHFENIILRNVSNPILIDQEYCPWNQCYKQKSSSIKLADICFRRIRGTSGKKDAV 1079
Query: 1112 NLLCSAKIPCTGVTMDDVNIKYSGTNNKTMAVCKNAKGSAKG 1237
LLC PC V + D+NI+ G + + N + G
Sbjct: 1080 KLLCGKGYPCENVQVGDINIQ*IGADGPATFMWSNVRPKLVG 1205
Score = 154 bits (330), Expect(2) = 6e-038
Identities = 94/237 (39%), Positives = 118/237 (49%)
Frame = -2 / -1
Query: 1140 HGILAEQSRLTASGVEEVPVMFLKVTSLTVTLEAPLAVHNLLGQYFMSMMMG*PESSILI 961
HG + TAS +VP++ LK S ++ + H GQY SM +G +I
Sbjct: 1108 HGYPLPHNNFTASFFPDVPLILLKHMSASLMDDDFCL*HWFQGQYSWSMRIGLLTFLRMI 929
Query: 960 FS*WILEAVSTEAASSYALMRTPLAVFLSVQSLTLISVTSFSSLYRPRLPMLMPWPGPQV 781
FS ILEAV +AA L+ PL+V VQ +TL+ +TS S Y PRLP L+P PGP
Sbjct: 928 FSK*ILEAVVEQAAEGQVLILRPLSVSWGVQLMTLMPLTSCSCPYLPRLPTLIPCPGPHT 749
Query: 780 TPVMFTLEVPGPMEMQSSPTPMTVLVMVTPDESPMWMPSVLGLSPGAVTLTSLISMSLHL 601
T + +P P E QSSP + L+M TP P W+PSVLGLS GA+ LT M L
Sbjct: 748 TFLTRRFTIPSPTETQSSPVEILELIMETPTLLPKWIPSVLGLSAGAMILTLSKVMFLAP 569
Query: 600 YMFMWKNLELSSVIPDTSPLFTKSITSELGRILQSYFLTQEFLLHTAGPCPSSFPLP 430
M K L + S TKS +G L S L Q L A P PS P P
Sbjct: 568 ITLM*KFLASIEDMSLISAFVTKSNLILMGSFLHSKVL*QLLTLQAALPSPSKVPPP 398
Score = 52.8 bits (109), Expect(2) = 4e-090
Identities = 21/55 (38%), Positives = 34/55 (61%)
Frame = +2 / +3
Query: 191 TDSTKAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCKGDVTIQVNGNLLA 355
+D T+A+ A+ +AC + ++IPKG F +G + +GPCK V I + G +LA
Sbjct: 165 SDITQALLRAFTTACQSPTPRKVVIPKGQFKLGEIMMSGPCKSPVEITLLGTVLA 329
Score = 27.2 bits (53), Expect(2) = 6e-038
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = -2 / -1
Query: 381 SLYWLRSVVASRLPFTWMVTSPLHGPVKLSGPTRKSPLGM 262
S W+ A +P + T LHGP + P+ P G+
Sbjct: 355 SFPWIEFPSARTVPSKVISTGDLHGPDIMISPSLNCPFGI 236
>emb|BX823616.1|CNS0A4Y3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS57ZE12 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1644
Score = 168 bits (361), Expect(5) = 1e-087
Identities = 64/126 (50%), Positives = 87/126 (69%)
Frame = +2 / +2
Query: 536 VNNGEVSGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTV 715
+ N +++ IT NSK FHMN+ CK++ + D+ + AP +S NTDGIH+G S+GV +
Sbjct: 668 LTNSKINSITSTNSKLFHMNILNCKNITLTDIGIDAPPESLNTDGIHIGRSNGVNLIGAK 847
Query: 716 IGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTANG 895
I GDDC+SIG GT + + V CGPGHGISIGSLGRY +E+ V + V+ C +K T NG
Sbjct: 848 IKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNG 1027
Query: 896 VRIKAY 913
VRIK +
Sbjct: 1028 VRIKTW 1045
Score = 117 bits (250), Expect(4) = 9e-040
Identities = 58/118 (49%), Positives = 69/118 (58%)
Frame = -2 / -1
Query: 912 YALMRTPLAVFLSVQSLTLISVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQ 733
+ LMRTPL+VFL LT+ T S Y PRLPM +P PGP T VP PME Q
Sbjct: 1044 HVLMRTPLSVFLMRHFLTVTPFTGCSLGYLPRLPMEIPCPGPHSTFSTMRFSVPSPMETQ 865
Query: 732 SSPTPMTVLVMVTPDESPMWMPSVLGLSPGAVTLTSLISMSLHLYMFMWKNLELSSVI 559
SSP + + +TP + PMW+PSVL LS GA S+ M L L MFMWK+L VI
Sbjct: 864 SSPVLIFAPIKLTPLDLPMWIPSVLRLSGGASIPISVRVMFLQLRMFMWKSLLFVDVI 691
Score = 112 bits (240), Expect(5) = 1e-087
Identities = 45/107 (42%), Positives = 64/107 (59%)
Frame = +2 / +2
Query: 938 ASKIHYENIKMEDSGYPIIIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAVNL 1117
AS I +E+I M++ P++ID +YCP C A SKV + DVT KNI GTS+T AV L
Sbjct: 1067 ASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSKVKLSDVTIKNIKGTSATKVAVKL 1246
Query: 1118 LCSAKIPCTGVTMDDVNIKYSGTNNKTMAVCKNAKGSAKGCLKELAC 1258
+CS +PCT + + D+N+ ++G ++ C N K G L AC
Sbjct: 1247 MCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIKPILSGKLVPAAC 1387
Score = 54.7 bits (113), Expect(5) = 1e-087
Identities = 20/34 (58%), Positives = 26/34 (76%)
Frame = +2 / +2
Query: 254 TILIPKGDFLVGPLNFTGPCKGDVTIQVNGNLLA 355
TI +PKG++LV L F GPCKG VT+++NGN A
Sbjct: 386 TITVPKGEYLVESLEFKGPCKGPVTLELNGNFEA 487
Score = 43.2 bits (88), Expect(4) = 9e-040
Identities = 35/107 (32%), Positives = 45/107 (42%)
Frame = -2 / -1
Query: 1254 ASSLRQPLALPLAFLHTAXXXXXXXXXXXLTSSMVTPVHGILAEQSRLTASGVEEVPVMF 1075
A+ PL + L H L S V G TA+ V +VP+MF
Sbjct: 1383 AAGTNFPLRIGLMLEHAETAGPSLPLWTKLMSERAILVQGTPLLHISFTATFVADVPLMF 1204
Query: 1074 LKVTSLTVTLEAPLAVHNLLGQYFMSMMMG*PESSILIFS*WILEAV 934
L VTS T + A+ GQY SM G SI+I S +LEA+
Sbjct: 1203 LIVTSDNFTFDGTPALQWP*GQYSWSMRTGRLTLSIVISSKRMLEAI 1063
Score = 41.4 bits (84), Expect(5) = 1e-087
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +2 / +2
Query: 143 GGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTI 259
G S D+ GA G+GKTD + A AW AC T+
Sbjct: 281 GASLDVKASGAKGDGKTDDSAAFAAAWKEACAAGSTITV 397
Score = 40.9 bits (83), Expect(4) = 9e-040
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = -2 / -1
Query: 354 ASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIV 253
AS+LPF VT PLHGP+ T+ SP G IV
Sbjct: 486 ASKLPFNSKVTGPLHGPLNSRLSTKYSPFGTVIV 385
Score = 32.2 bits (64), Expect(4) = 9e-040
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -2 / -1
Query: 231 ADAHASCTAFVLSVLPLPEAPNLVMSKDPP 142
A HA+ A + SVLP P AP+ + S D P
Sbjct: 369 ASFHAAANAALSSVLPSPLAPDALTSSDAP 280
Score = 26.3 bits (51), Expect(5) = 1e-087
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +2 / +1
Query: 446 DGQGPAVWSKNSCVK 490
DGQG W N C K
Sbjct: 580 DGQGSLAWKANDCAK 624
>ref|NM_103464.1| Arabidopsis thaliana polygalacturonase AT1G43090 mRNA, complete cds
Length = 1335
Score = 258 bits (558), Expect(3) = 8e-087
Identities = 108/212 (50%), Positives = 135/212 (63%)
Frame = +2 / +1
Query: 392 WIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGITLL 571
WI ++NL I+G G LDGQG W N C K +C L ++ FVNN + IT L
Sbjct: 331 WINFRYINNLSISGSGTLDGQGKYSWPLNDCHKNTNCPKLAMTMGFAFVNNSRIKDITSL 510
Query: 572 NSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGP 751
NSK H N + I V +TAPGDSPNTDGI MG S + I+NT IG GDDCI+I
Sbjct: 511 NSKMGHFNFFSVHRFNITGVTITAPGDSPNTDGIKMGSCSNIHISNTNIGTGDDCIAILS 690
Query: 752 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAYEDAASV 931
GT+ ++I+ V CGPGHGIS+GSLG+ KDEKDV + V+D T++G+RIK +E +AS
Sbjct: 691 GTTNLDISNVKCGPGHGISVGSLGKNKDEKDVKHLTVRDTVFNGTSDGIRIKTWESSASK 870
Query: 932 LTASKIHYENIKMEDSGYPIIIDMKYCPNKLC 1027
L S YENI+M D G PI ID KYCP+ C
Sbjct: 871 LVVSNFIYENIQMIDVGKPINIDQKYCPHPPC 966
Score = 127 bits (273), Expect(4) = 5e-034
Identities = 66/132 (50%), Positives = 82/132 (62%)
Frame = -2 / -2
Query: 1014 GQYFMSMMMG*PESSILIFS*WILEAVSTEAASSYALMRTPLAVFLSVQSLTLISVTSFS 835
GQYF SM++G P S I IFS LE S EA S L+R P V L SLT+ TSFS
Sbjct: 953 GQYF*SMLIGFPTSII*IFSYMKLETTSFEAEDSQVLIRIPSLVPLKTVSLTVKCFTSFS 774
Query: 834 SLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVTPDESPMWMPSVLG 655
SL+ P+LP L+P PGP +T + L VP M +QSSP PM V M + P+ +PSV G
Sbjct: 773 SLFFPKLPTLIPCPGPHLTLEISRLVVPERMAIQSSPVPMFVFEM*MLLQEPILIPSVFG 594
Query: 654 LSPGAVTLTSLI 619
LSPGAV +T ++
Sbjct: 593 LSPGAVIVTPVM 558
Score = 59.3 bits (123), Expect(3) = 8e-087
Identities = 23/49 (46%), Positives = 32/49 (65%)
Frame = +2 / +1
Query: 1037 GASKVTVKDVTFKNITGTSSTPEAVNLLCSAKIPCTGVTMDDVNIKYSG 1183
G S V ++D+ KNI GTS+ AVNL CS PC V + D+N+K++G
Sbjct: 982 GKSHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCKNVELIDINLKHTG 1128
Score = 46.0 bits (94), Expect(3) = 8e-087
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +2 / +1
Query: 242 TGKQTILIPKGDFLVGPLNFTGPCKGDVTIQVNGNLLA 355
+G I +PKG F +G + F GPCK + ++G LLA
Sbjct: 184 SGSSKIYVPKGTFYLGGVEFVGPCKNPIEFVIDGTLLA 297
Score = 26.7 bits (52), Expect(4) = 5e-034
Identities = 19/55 (34%), Positives = 24/55 (43%)
Frame = -2 / -2
Query: 579 LELSSVIPDTSPLFTKSITSELGRILQSYFLTQEFLLHTAGPCPSSFPLPVMTRL 415
L LS V+ LFT + + + Q FL Q P PSS P P + RL
Sbjct: 518 LLLSDVMSLILELFTNANPIVIASLGQLVFLWQSLSGQEYFPWPSSVPEPEIERL 354
Score = 26.3 bits (51), Expect(4) = 5e-034
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -2 / -2
Query: 1149 TPVHGILAEQSRLTASGVEEVPVMFLKVTSLTVTLEAP 1036
T +HG L R TA+ + +VP MF + S T + P
Sbjct: 1094 TFLHGKLLLHCRFTATMLFDVPYMFFNLMSWI*T*DLP 981
Score = 22.6 bits (43), Expect(4) = 5e-034
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = -2 / -2
Query: 354 ASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIVCFPV 241
A+++P LHGP + P P G I+ P+
Sbjct: 296 ANKVPSMTNSIGFLHGPTNSTPPR*NVPFGT*ILLLPL 183
>gb|DQ056483.1| Arabidopsis thaliana glycoside hydrolase family 28 protein
(At1g43080) mRNA, complete cds
Length = 1215
Score = 257 bits (555), Expect(3) = 2e-086
Identities = 106/212 (50%), Positives = 135/212 (63%)
Frame = +2 / +1
Query: 392 WIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGITLL 571
WI ++NL I+G G LDGQG W N C K +C L ++ FVNN + IT L
Sbjct: 331 WINFRYINNLSISGSGTLDGQGKYSWPLNDCHKNTNCPKLAMTMGFAFVNNSRIKDITSL 510
Query: 572 NSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGP 751
NSK H N + I V +TAPGDSPNTDGI MG S + I+NT IG GDDCI+I
Sbjct: 511 NSKMGHFNFFSVHRFNITGVTITAPGDSPNTDGIKMGSCSNIHISNTNIGTGDDCIAILS 690
Query: 752 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAYEDAASV 931
GT+ ++I+ + CGPGHGIS+GSLG+ KDEKDV + V+D T++G+RIK +E +AS
Sbjct: 691 GTTNLDISNIKCGPGHGISVGSLGKNKDEKDVKHLTVRDTVFNGTSDGIRIKTWESSASK 870
Query: 932 LTASKIHYENIKMEDSGYPIIIDMKYCPNKLC 1027
+ S YENI+M D G PI ID KYCP+ C
Sbjct: 871 IVVSNFIYENIQMIDVGKPINIDQKYCPHPPC 966
Score = 122 bits (261), Expect(4) = 1e-032
Identities = 64/132 (48%), Positives = 80/132 (60%)
Frame = -2 / -2
Query: 1014 GQYFMSMMMG*PESSILIFS*WILEAVSTEAASSYALMRTPLAVFLSVQSLTLISVTSFS 835
GQYF SM++G P S I IFS LE EA S L+R P V L SLT+ TSFS
Sbjct: 953 GQYF*SMLIGFPTSII*IFSYMKLETTIFEAEDSQVLIRIPSLVPLKTVSLTVKCFTSFS 774
Query: 834 SLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVTPDESPMWMPSVLG 655
SL+ P+LP L+P PGP + + L VP M +QSSP PM V M + P+ +PSV G
Sbjct: 773 SLFFPKLPTLIPCPGPHLMLEISRLVVPERMAIQSSPVPMFVFEM*MLLQEPILIPSVFG 594
Query: 654 LSPGAVTLTSLI 619
LSPGAV +T ++
Sbjct: 593 LSPGAVIVTPVM 558
Score = 59.3 bits (123), Expect(3) = 2e-086
Identities = 23/49 (46%), Positives = 32/49 (65%)
Frame = +2 / +1
Query: 1037 GASKVTVKDVTFKNITGTSSTPEAVNLLCSAKIPCTGVTMDDVNIKYSG 1183
G S V ++D+ KNI GTS+ AVNL CS PC V + D+N+K++G
Sbjct: 982 GESHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCKNVELIDINLKHTG 1128
Score = 46.0 bits (94), Expect(3) = 2e-086
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +2 / +1
Query: 242 TGKQTILIPKGDFLVGPLNFTGPCKGDVTIQVNGNLLA 355
+G I +PKG F +G + F GPCK + ++G LLA
Sbjct: 184 SGSSKIYVPKGTFYLGGVEFVGPCKNPIEFVIDGTLLA 297
Score = 27.2 bits (53), Expect(4) = 1e-032
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -2 / -2
Query: 1149 TPVHGILAEQSRLTASGVEEVPVMFLKVTSLTVTLEAP 1036
T +HG L R TA+ + +VP MF + S T ++P
Sbjct: 1094 TFLHGKLLLHCRFTATMLFDVPYMFFNLMSWI*T*DSP 981
Score = 26.7 bits (52), Expect(4) = 1e-032
Identities = 19/55 (34%), Positives = 24/55 (43%)
Frame = -2 / -2
Query: 579 LELSSVIPDTSPLFTKSITSELGRILQSYFLTQEFLLHTAGPCPSSFPLPVMTRL 415
L LS V+ LFT + + + Q FL Q P PSS P P + RL
Sbjct: 518 LLLSDVMSLILELFTNANPIVIASLGQLVFLWQSLSGQEYFPWPSSVPEPEIERL 354
Score = 22.6 bits (43), Expect(4) = 1e-032
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = -2 / -2
Query: 354 ASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIVCFPV 241
A+++P LHGP + P P G I+ P+
Sbjct: 296 ANKVPSMTNSIGFLHGPTNSTPPR*NVPFGT*ILLLPL 183
>ref|NM_103463.1| Arabidopsis thaliana polygalacturonase AT1G43080 mRNA, complete cds
Length = 1215
Score = 257 bits (555), Expect(3) = 2e-086
Identities = 106/212 (50%), Positives = 135/212 (63%)
Frame = +2 / +1
Query: 392 WIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGITLL 571
WI ++NL I+G G LDGQG W N C K +C L ++ FVNN + IT L
Sbjct: 331 WINFRYINNLSISGSGTLDGQGKYSWPLNDCHKNTNCPKLAMTMGFAFVNNSRIKDITSL 510
Query: 572 NSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGP 751
NSK H N + I V +TAPGDSPNTDGI MG S + I+NT IG GDDCI+I
Sbjct: 511 NSKMGHFNFFSVHRFNITGVTITAPGDSPNTDGIKMGSCSNIHISNTNIGTGDDCIAILS 690
Query: 752 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAYEDAASV 931
GT+ ++I+ + CGPGHGIS+GSLG+ KDEKDV + V+D T++G+RIK +E +AS
Sbjct: 691 GTTNLDISNIKCGPGHGISVGSLGKNKDEKDVKHLTVRDTVFNGTSDGIRIKTWESSASK 870
Query: 932 LTASKIHYENIKMEDSGYPIIIDMKYCPNKLC 1027
+ S YENI+M D G PI ID KYCP+ C
Sbjct: 871 IVVSNFIYENIQMIDVGKPINIDQKYCPHPPC 966
Score = 122 bits (261), Expect(4) = 1e-032
Identities = 64/132 (48%), Positives = 80/132 (60%)
Frame = -2 / -2
Query: 1014 GQYFMSMMMG*PESSILIFS*WILEAVSTEAASSYALMRTPLAVFLSVQSLTLISVTSFS 835
GQYF SM++G P S I IFS LE EA S L+R P V L SLT+ TSFS
Sbjct: 953 GQYF*SMLIGFPTSII*IFSYMKLETTIFEAEDSQVLIRIPSLVPLKTVSLTVKCFTSFS 774
Query: 834 SLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVTPDESPMWMPSVLG 655
SL+ P+LP L+P PGP + + L VP M +QSSP PM V M + P+ +PSV G
Sbjct: 773 SLFFPKLPTLIPCPGPHLMLEISRLVVPERMAIQSSPVPMFVFEM*MLLQEPILIPSVFG 594
Query: 654 LSPGAVTLTSLI 619
LSPGAV +T ++
Sbjct: 593 LSPGAVIVTPVM 558
Score = 59.3 bits (123), Expect(3) = 2e-086
Identities = 23/49 (46%), Positives = 32/49 (65%)
Frame = +2 / +1
Query: 1037 GASKVTVKDVTFKNITGTSSTPEAVNLLCSAKIPCTGVTMDDVNIKYSG 1183
G S V ++D+ KNI GTS+ AVNL CS PC V + D+N+K++G
Sbjct: 982 GESHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCKNVELIDINLKHTG 1128
Score = 46.0 bits (94), Expect(3) = 2e-086
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +2 / +1
Query: 242 TGKQTILIPKGDFLVGPLNFTGPCKGDVTIQVNGNLLA 355
+G I +PKG F +G + F GPCK + ++G LLA
Sbjct: 184 SGSSKIYVPKGTFYLGGVEFVGPCKNPIEFVIDGTLLA 297
Score = 27.2 bits (53), Expect(4) = 1e-032
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -2 / -2
Query: 1149 TPVHGILAEQSRLTASGVEEVPVMFLKVTSLTVTLEAP 1036
T +HG L R TA+ + +VP MF + S T ++P
Sbjct: 1094 TFLHGKLLLHCRFTATMLFDVPYMFFNLMSWI*T*DSP 981
Score = 26.7 bits (52), Expect(4) = 1e-032
Identities = 19/55 (34%), Positives = 24/55 (43%)
Frame = -2 / -2
Query: 579 LELSSVIPDTSPLFTKSITSELGRILQSYFLTQEFLLHTAGPCPSSFPLPVMTRL 415
L LS V+ LFT + + + Q FL Q P PSS P P + RL
Sbjct: 518 LLLSDVMSLILELFTNANPIVIASLGQLVFLWQSLSGQEYFPWPSSVPEPEIERL 354
Score = 22.6 bits (43), Expect(4) = 1e-032
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = -2 / -2
Query: 354 ASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIVCFPV 241
A+++P LHGP + P P G I+ P+
Sbjct: 296 ANKVPSMTNSIGFLHGPTNSTPPR*NVPFGT*ILLLPL 183
>ref|NM_129589.1| Arabidopsis thaliana polygalacturonase AT2G40310 mRNA, complete cds
Length = 1215
Score = 254 bits (549), Expect(3) = 8e-086
Identities = 106/212 (50%), Positives = 135/212 (63%)
Frame = +2 / +1
Query: 392 WIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGITLL 571
WI ++NL I+G G LDGQG W N C K +C L ++ FVNN + IT L
Sbjct: 331 WINFRYINNLSISGSGTLDGQGKQSWPLNDCHKNLNCPKLAMTMGFAFVNNSNIKDITSL 510
Query: 572 NSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGP 751
NSK H N + I V +TA GDSPNTDGI MG S + I+NT IG GDDCI+I
Sbjct: 511 NSKMGHFNFFSVHHFNITGVTITASGDSPNTDGIKMGSCSNMHISNTNIGTGDDCIAILS 690
Query: 752 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAYEDAASV 931
GT+ ++I+ V CGPGHGIS+GSLG+ KDEKDV ++ V+D T++G+RIK +E +AS
Sbjct: 691 GTTNLDISNVKCGPGHGISVGSLGKNKDEKDVKNLTVRDVIFNGTSDGIRIKTWESSASK 870
Query: 932 LTASKIHYENIKMEDSGYPIIIDMKYCPNKLC 1027
+ S YENI+M D G PI ID KYCP+ C
Sbjct: 871 ILVSNFVYENIQMIDVGKPINIDQKYCPHPPC 966
Score = 123 bits (264), Expect(3) = 2e-030
Identities = 66/132 (50%), Positives = 81/132 (61%)
Frame = -2 / -2
Query: 1014 GQYFMSMMMG*PESSILIFS*WILEAVSTEAASSYALMRTPLAVFLSVQSLTLISVTSFS 835
GQYF SM++G P S I IFS E EA S L+R P V L + SLT+ TSFS
Sbjct: 953 GQYF*SMLIGFPTSII*IFSYTKFETRIFEAEDSQVLIRIPSLVPLKMTSLTVKFFTSFS 774
Query: 834 SLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVTPDESPMWMPSVLG 655
SL+ P+LP L+P PGP +T + L VP M +QSSP PM VL M P+ +PSVLG
Sbjct: 773 SLFFPKLPTLIPCPGPHLTLEISRLVVPERMAIQSSPVPMFVLEMCMLLHEPILIPSVLG 594
Query: 654 LSPGAVTLTSLI 619
LSP AV +T +I
Sbjct: 593 LSPEAVIVTPVI 558
Score = 58.8 bits (122), Expect(3) = 8e-086
Identities = 23/54 (42%), Positives = 32/54 (59%)
Frame = +2 / +1
Query: 1037 GASKVTVKDVTFKNITGTSSTPEAVNLLCSAKIPCTGVTMDDVNIKYSGTNNKT 1198
G S V ++D+ KNI GTS A+NL CS PC + + D+NIK +G N +
Sbjct: 982 GESHVQIQDLKLKNIYGTSKNKVAMNLQCSKSFPCKNIELIDINIKSNGLENSS 1143
Score = 47.3 bits (97), Expect(3) = 8e-086
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +2 / +1
Query: 242 TGKQTILIPKGDFLVGPLNFTGPCKGDVTIQVNGNLLATTDLSQYK 379
+G I +PKG F +G + F GPCK + ++G LLA + S K
Sbjct: 184 SGSSKIYVPKGIFYLGGVEFVGPCKNPIEFVIDGTLLAPANPSDIK 321
Score = 27.2 bits (53), Expect(3) = 2e-030
Identities = 19/55 (34%), Positives = 24/55 (43%)
Frame = -2 / -2
Query: 579 LELSSVIPDTSPLFTKSITSELGRILQSYFLTQEFLLHTAGPCPSSFPLPVMTRL 415
L LS V+ LFT + + + Q FL Q P PSS P P + RL
Sbjct: 518 LLLSDVMSLIFELFTNANPIVIASLGQLRFLWQSLSGQDCFPWPSSVPEPEIERL 354
Score = 22.6 bits (43), Expect(3) = 2e-030
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = -2 / -2
Query: 354 ASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIVCFPV 241
A+++P LHGP + P P G I+ P+
Sbjct: 296 ANKVPSMTNSIGFLHGPTNSTPPR*NIPFGT*ILLLPL 183
>ref|NM_127106.1| Arabidopsis thaliana polygalacturonase AT2G15460 mRNA, complete cds
Length = 1209
Score = 257 bits (556), Expect(3) = 8e-086
Identities = 107/212 (50%), Positives = 135/212 (63%)
Frame = +2 / +1
Query: 392 WIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGITLL 571
WI ++NL I+G G LDGQG W N C +C L ++ FVNN + IT L
Sbjct: 331 WINFRYINNLSISGSGTLDGQGKQSWPHNDCHTNPNCPKLAMTMGFAFVNNSNIKDITSL 510
Query: 572 NSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGP 751
NSK H N + I V +TAPGDSPNTDGI MG S + I++T IG GDDCI+I
Sbjct: 511 NSKMGHFNFFSVHHFNITGVTITAPGDSPNTDGIKMGSCSNIQISDTNIGTGDDCIAILS 690
Query: 752 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAYEDAASV 931
GT+ +NI+ V CGPGHGIS+GSLG+ KDEKDV D+ V+D T++G+RIK +E +AS
Sbjct: 691 GTTNLNISNVNCGPGHGISVGSLGKSKDEKDVKDLIVRDVIFNGTSDGIRIKTWESSASK 870
Query: 932 LTASKIHYENIKMEDSGYPIIIDMKYCPNKLC 1027
+ S YENI+M D G PI ID KYCP+ C
Sbjct: 871 ILVSNFVYENIQMIDVGKPINIDQKYCPHPPC 966
Score = 122 bits (262), Expect(4) = 2e-030
Identities = 65/132 (49%), Positives = 82/132 (62%)
Frame = -2 / -2
Query: 1014 GQYFMSMMMG*PESSILIFS*WILEAVSTEAASSYALMRTPLAVFLSVQSLTLISVTSFS 835
GQYF SM++G P S I IFS E EA S L+R P V L + SLT+ S TSFS
Sbjct: 953 GQYF*SMLIGFPTSII*IFSYTKFETRIFEAEDSQVLIRIPSLVPLKMTSLTIKSFTSFS 774
Query: 834 SLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVTPDESPMWMPSVLG 655
SL P+LP L+P PGPQ+T + L VP + +QSSP PM V + P+ +PSVLG
Sbjct: 773 SLLFPKLPTLIPCPGPQLTLEILRLVVPERIAIQSSPVPMFVSEI*MLLHEPILIPSVLG 594
Query: 654 LSPGAVTLTSLI 619
LSPGAV +T ++
Sbjct: 593 LSPGAVIVTPVM 558
Score = 55.1 bits (114), Expect(3) = 8e-086
Identities = 23/52 (44%), Positives = 31/52 (59%)
Frame = +2 / +1
Query: 1037 GASKVTVKDVTFKNITGTSSTPEAVNLLCSAKIPCTGVTMDDVNIKYSGTNN 1192
G S V ++++ KNI GTS AVNL CS PC V + D+NIK +G +
Sbjct: 982 GESHVQIQNLKLKNIYGTSKNKVAVNLQCSKIFPCKNVELIDINIKQNGVKD 1137
Score = 47.8 bits (98), Expect(3) = 8e-086
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +2 / +1
Query: 242 TGKQTILIPKGDFLVGPLNFTGPCKGDVTIQVNGNLLATTDLSQYK 379
+G I +PKG F +G + F GPCK + ++G LLA + S K
Sbjct: 184 SGSSKIYVPKGTFYLGGVEFVGPCKNPIEFIIDGTLLAPANPSDIK 321
Score = 23.5 bits (45), Expect(4) = 2e-030
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -2 / -2
Query: 543 LFTKSITSELGRILQSYFLTQEFLLHTAGPCPSSFPLPVMTRL 415
LFT + + + Q F+ Q P PSS P P + RL
Sbjct: 482 LFTNANPIVIASLGQLGFVWQSLCGQDCFPWPSSVPEPEIERL 354
Score = 23.1 bits (44), Expect(4) = 2e-030
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = -2 / -2
Query: 354 ASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIVCFPV 241
A+++P LHGP + P P G I+ P+
Sbjct: 296 ANKVPSMMNSIGFLHGPTNSTPPR*NVPFGT*ILLLPL 183
Score = 22.1 bits (42), Expect(4) = 2e-030
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = -2 / -2
Query: 1149 TPVHGILAEQSRLTASGVEEVPVMFLKVTSLTVTLEAP 1036
T +HG + R TA+ +VP MF + T ++P
Sbjct: 1094 TFLHGKILLHCRFTATLFFDVPYMFFNLRFWI*T*DSP 981
>ref|NM_127105.1| Arabidopsis thaliana polygalacturonase AT2G15450 mRNA, complete cds
Length = 1215
Score = 256 bits (554), Expect(3) = 1e-085
Identities = 107/212 (50%), Positives = 135/212 (63%)
Frame = +2 / +1
Query: 392 WIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGITLL 571
WI ++NL I+G G LDGQG W N C +C L ++ FVNN + IT L
Sbjct: 331 WINFRYINNLSISGSGTLDGQGKQSWPHNDCHTNPNCPKLAMTMGFAFVNNSNIKDITSL 510
Query: 572 NSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGP 751
NSK H N + I V +TAPGDSPNTDGI MG S + I++T IG GDDCI+I
Sbjct: 511 NSKMGHFNFFSVHHFNITGVTITAPGDSPNTDGIKMGSCSNIQISDTNIGTGDDCIAILS 690
Query: 752 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAYEDAASV 931
GT+ +NI+ V CGPGHGIS+GSLG+ KDEKDV D+ V+D T++G+RIK +E +AS
Sbjct: 691 GTTNLNISNVNCGPGHGISVGSLGKNKDEKDVKDLIVRDVIFNGTSDGIRIKNWESSASK 870
Query: 932 LTASKIHYENIKMEDSGYPIIIDMKYCPNKLC 1027
+ S YENI+M D G PI ID KYCP+ C
Sbjct: 871 ILVSNFVYENIQMIDVGKPINIDQKYCPHPPC 966
Score = 123 bits (264), Expect(4) = 8e-031
Identities = 65/132 (49%), Positives = 83/132 (62%)
Frame = -2 / -2
Query: 1014 GQYFMSMMMG*PESSILIFS*WILEAVSTEAASSYALMRTPLAVFLSVQSLTLISVTSFS 835
GQYF SM++G P S I IFS E EA S L+R P V L + SLT+ S TSFS
Sbjct: 953 GQYF*SMLIGFPTSII*IFSYTKFETRIFEAEDSQFLIRIPSLVPLKMTSLTIKSFTSFS 774
Query: 834 SLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVTPDESPMWMPSVLG 655
SL+ P+LP L+P PGPQ+T + L VP + +QSSP PM V + P+ +PSVLG
Sbjct: 773 SLFFPKLPTLIPCPGPQLTLEILRLVVPERIAIQSSPVPMFVSEI*MLLHEPILIPSVLG 594
Query: 654 LSPGAVTLTSLI 619
LSPGAV +T ++
Sbjct: 593 LSPGAVIVTPVM 558
Score = 55.1 bits (114), Expect(3) = 1e-085
Identities = 23/52 (44%), Positives = 31/52 (59%)
Frame = +2 / +1
Query: 1037 GASKVTVKDVTFKNITGTSSTPEAVNLLCSAKIPCTGVTMDDVNIKYSGTNN 1192
G S V ++++ KNI GTS AVNL CS PC V + D+NIK +G +
Sbjct: 982 GESHVQIQNLKLKNIYGTSKNKVAVNLQCSKIFPCKNVELIDINIKQNGVKD 1137
Score = 47.8 bits (98), Expect(3) = 1e-085
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +2 / +1
Query: 242 TGKQTILIPKGDFLVGPLNFTGPCKGDVTIQVNGNLLATTDLSQYK 379
+G I +PKG F +G + F GPCK + ++G LLA + S K
Sbjct: 184 SGSSKIYVPKGTFYLGGVEFVGPCKNPIEFIIDGTLLAPANPSDIK 321
Score = 23.5 bits (45), Expect(4) = 8e-031
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -2 / -2
Query: 543 LFTKSITSELGRILQSYFLTQEFLLHTAGPCPSSFPLPVMTRL 415
LFT + + + Q F+ Q P PSS P P + RL
Sbjct: 482 LFTNANPIVIASLGQLGFVWQSLCGQDCFPWPSSVPEPEIERL 354
Score = 23.1 bits (44), Expect(4) = 8e-031
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = -2 / -2
Query: 354 ASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIVCFPV 241
A+++P LHGP + P P G I+ P+
Sbjct: 296 ANKVPSMMNSIGFLHGPTNSTPPR*NVPFGT*ILLLPL 183
Score = 22.1 bits (42), Expect(4) = 8e-031
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = -2 / -2
Query: 1149 TPVHGILAEQSRLTASGVEEVPVMFLKVTSLTVTLEAP 1036
T +HG + R TA+ +VP MF + T ++P
Sbjct: 1094 TFLHGKILLHCRFTATLFFDVPYMFFNLRFWI*T*DSP 981
>ref|NM_103465.1| Arabidopsis thaliana polygalacturonase AT1G43100 mRNA, complete cds
Length = 1335
Score = 258 bits (558), Expect(3) = 3e-085
Identities = 108/212 (50%), Positives = 135/212 (63%)
Frame = +2 / +1
Query: 392 WIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGITLL 571
WI ++NL I+G G LDGQG W N C K +C L ++ FVNN + IT L
Sbjct: 331 WINFRYINNLSISGSGTLDGQGKYSWPLNDCHKNTNCPELAMTMGFAFVNNSRIKDITSL 510
Query: 572 NSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGP 751
NSK H N + I V +TAPGDSPNTDGI MG S + I+NT IG GDDCI+I
Sbjct: 511 NSKMGHFNFFSVHRFNITGVTITAPGDSPNTDGIKMGSCSNIHISNTNIGTGDDCIAILS 690
Query: 752 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAYEDAASV 931
GT+ ++I+ V CGPGHGIS+GSLG+ KDEKDV + V+D T++G+RIK +E +AS
Sbjct: 691 GTTNLDISNVKCGPGHGISVGSLGKNKDEKDVKHLTVRDTVFNGTSDGIRIKTWESSASK 870
Query: 932 LTASKIHYENIKMEDSGYPIIIDMKYCPNKLC 1027
L S YENI+M D G PI ID KYCP+ C
Sbjct: 871 LVVSNFIYENIQMIDVGKPINIDQKYCPHPPC 966
Score = 127 bits (273), Expect(3) = 6e-032
Identities = 66/132 (50%), Positives = 82/132 (62%)
Frame = -2 / -2
Query: 1014 GQYFMSMMMG*PESSILIFS*WILEAVSTEAASSYALMRTPLAVFLSVQSLTLISVTSFS 835
GQYF SM++G P S I IFS LE S EA S L+R P V L SLT+ TSFS
Sbjct: 953 GQYF*SMLIGFPTSII*IFSYMKLETTSFEAEDSQVLIRIPSLVPLKTVSLTVKCFTSFS 774
Query: 834 SLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVTPDESPMWMPSVLG 655
SL+ P+LP L+P PGP +T + L VP M +QSSP PM V M + P+ +PSV G
Sbjct: 773 SLFFPKLPTLIPCPGPHLTLEISRLVVPERMAIQSSPVPMFVFEM*MLLQEPILIPSVFG 594
Query: 654 LSPGAVTLTSLI 619
LSPGAV +T ++
Sbjct: 593 LSPGAVIVTPVM 558
Score = 59.3 bits (123), Expect(3) = 3e-085
Identities = 23/49 (46%), Positives = 32/49 (65%)
Frame = +2 / +1
Query: 1037 GASKVTVKDVTFKNITGTSSTPEAVNLLCSAKIPCTGVTMDDVNIKYSG 1183
G S V ++D+ KNI GTS+ AVNL CS PC V + D+N+K++G
Sbjct: 982 GKSHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCKNVELIDINLKHTG 1128
Score = 40.9 bits (83), Expect(3) = 3e-085
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +2 / +1
Query: 242 TGKQTILIPKGDFLVGPLNFTGPCKGDVTIQVNGNLLA 355
+G I +PKG F +G + F GP K + ++G LLA
Sbjct: 184 SGSSKIYVPKGKFYLGGVEFVGPYKNPIEFVIDGTLLA 297
Score = 26.3 bits (51), Expect(3) = 6e-032
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -2 / -2
Query: 1149 TPVHGILAEQSRLTASGVEEVPVMFLKVTSLTVTLEAP 1036
T +HG L R TA+ + +VP MF + S T + P
Sbjct: 1094 TFLHGKLLLHCRFTATMLFDVPYMFFNLMSWI*T*DLP 981
Score = 24.9 bits (48), Expect(3) = 6e-032
Identities = 19/55 (34%), Positives = 23/55 (41%)
Frame = -2 / -2
Query: 579 LELSSVIPDTSPLFTKSITSELGRILQSYFLTQEFLLHTAGPCPSSFPLPVMTRL 415
L LS V+ LFT + + Q FL Q P PSS P P + RL
Sbjct: 518 LLLSDVMSLILELFTNANPIVIASSGQLVFLWQSLSGQEYFPWPSSVPEPEIERL 354
>ref|NM_117450.1| Arabidopsis thaliana polygalacturonase AT4G13760 mRNA, complete cds
Length = 1128
Score = 256 bits (553), Expect(3) = 1e-084
Identities = 105/212 (49%), Positives = 137/212 (64%)
Frame = +2 / +1
Query: 392 WIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGITLL 571
WI+ +++L I+G G LDGQG W N C K +C L ++ FVNN + IT L
Sbjct: 244 WIKFKYINDLSISGSGTLDGQGKQSWPLNDCHKNPNCPKLAMTMGFAFVNNSNIKDITSL 423
Query: 572 NSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGP 751
NSK H N + I V +TAPG+SPNTDGI MG S + I+NT IG GDDCI+I
Sbjct: 424 NSKMGHFNFFSVHHFNITGVTITAPGNSPNTDGIKMGSCSNIHISNTNIGTGDDCIAILS 603
Query: 752 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAYEDAASV 931
GT+ ++I+ V CGPGHGIS+GSLG+ KDEKDV D+ ++D T++G+RIK +E +AS
Sbjct: 604 GTTNLDISNVNCGPGHGISVGSLGKNKDEKDVKDLTIRDVIFNGTSDGIRIKTWESSASK 783
Query: 932 LTASKIHYENIKMEDSGYPIIIDMKYCPNKLC 1027
+ S YENI+M D G PI ID KYCP+ C
Sbjct: 784 ILVSNFLYENIQMIDVGKPINIDQKYCPHPPC 879
Score = 125 bits (267), Expect(3) = 1e-031
Identities = 66/132 (50%), Positives = 82/132 (62%)
Frame = -2 / -2
Query: 1014 GQYFMSMMMG*PESSILIFS*WILEAVSTEAASSYALMRTPLAVFLSVQSLTLISVTSFS 835
GQYF SM++G P S I IFS E EA S L+R P V L + SL + S TSFS
Sbjct: 866 GQYF*SMLIGFPTSII*IFSYKKFETRIFEAEDSQVLIRIPSLVPLKITSLIVKSFTSFS 687
Query: 834 SLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVTPDESPMWMPSVLG 655
SL+ P+LP L+P PGPQ+T + L VP M +QSSP PM VL M P+ +PSVLG
Sbjct: 686 SLFFPKLPTLIPCPGPQLTLEISRLVVPESMAIQSSPVPMFVLEM*MLLHEPILIPSVLG 507
Query: 654 LSPGAVTLTSLI 619
L PGAV +T ++
Sbjct: 506 LLPGAVIVTPVM 471
Score = 53.3 bits (110), Expect(3) = 1e-084
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +2 / +1
Query: 1037 GASKVTVKDVTFKNITGTSSTPEAVNLLCSAKIPCTGVTMDDVNIKYSG 1183
G S V ++++ KNI GTS AVNL CS + PC + + D+NI +G
Sbjct: 895 GESHVQIQNLKLKNIYGTSKNKVAVNLQCSKRFPCKNIELIDINITNNG 1041
Score = 46.9 bits (96), Expect(3) = 1e-084
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +2 / +1
Query: 242 TGKQTILIPKGDFLVGPLNFTGPCKGDVTIQVNGNLLATTDLSQYK 379
+G I +PKG F +G + F GPCK + ++G LLA + + K
Sbjct: 97 SGSSKIYVPKGTFYLGGVEFVGPCKNPIEFLIDGTLLAPANPNNIK 234
Score = 30.4 bits (60), Expect(3) = 1e-031
Identities = 19/54 (35%), Positives = 24/54 (44%)
Frame = -2 / -2
Query: 579 LELSSVIPDTSPLFTKSITSELGRILQSYFLTQEFLLHTAGPCPSSFPLPVMTR 418
L LS V+ LFT + + + Q FL Q PCPSS P P + R
Sbjct: 431 LLLSDVMSLIFELFTNANPIVIANLGQLGFLWQSLSGQDCFPCPSSVPEPEIER 270
Score = 22.1 bits (42), Expect(3) = 1e-031
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -2 / -2
Query: 315 LHGPVKLSGPTRKSPLGMRIVCFPV 241
LHGP + P P G I+ P+
Sbjct: 170 LHGPTNSTPPR*NVPFGT*ILLLPL 96
>emb|BX819999.1|CNS0AA2M Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS59ZH05 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1532
Score = 251 bits (542), Expect(3) = 6e-084
Identities = 101/216 (46%), Positives = 141/216 (65%)
Frame = +2 / +2
Query: 392 WIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGITLL 571
WI VDNL +TG G LDGQG W N C K +C+ L ++ FV + +++G+ +
Sbjct: 356 WILFKYVDNLTVTGGGLLDGQGSYSWPLNDCNKNTNCRTLAMNIGFAFVKSSKINGLRSI 535
Query: 572 NSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGP 751
NSK H N++ +D I V +T PGDSPNTDGI +G SS + I N IG GDDCI+I
Sbjct: 536 NSKMGHFNLFSVEDFDITGVTITTPGDSPNTDGIKIGKSSHMQIYNVTIGTGDDCIAILD 715
Query: 752 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAYEDAASV 931
GTS ++I+ V CGPGHGIS+GSLGRYK+EK+V + V++ + T +G+RIK + + S
Sbjct: 716 GTSNLDISDVRCGPGHGISVGSLGRYKEEKNVQGLTVRNSIINGTTDGLRIKTWAKSVSQ 895
Query: 932 LTASKIHYENIKMEDSGYPIIIDMKYCPNKLCTANG 1039
++ S YENI+M + G PI+ID +YCP+ C + G
Sbjct: 896 ISVSNFLYENIQMINVGNPIVIDQQYCPHGQCDSPG 1003
Score = 108 bits (231), Expect(2) = 6e-025
Identities = 58/139 (41%), Positives = 80/139 (57%)
Frame = -2 / -3
Query: 1026 HNLLGQYFMSMMMG*PESSILIFS*WILEAVSTEAASSYALMRTPLAVFLSVQSLTLISV 847
H GQY SM +G P I +FS E + ++ L+R P V L ++ LT+
Sbjct: 990 HCPCGQYC*SMTIGFPTLIIWMFSYKKFETEICDTDLAHVLIRKPSVVPLIIEFLTVKPW 811
Query: 846 TSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVTPDESPMWMP 667
T FSSLY PRLP L+P PGP +T + L VP + +QSSP P+ L + + P+ +P
Sbjct: 810 TFFSSLYLPRLPTLIPCPGPHLTSEISKLLVPSRIAIQSSPVPIVTL*ICIWLDFPILIP 631
Query: 666 SVLGLSPGAVTLTSLISMS 610
SVLGLSPG V +T ++S S
Sbjct: 630 SVLGLSPGVVMVTPVMSKS 574
Score = 72.1 bits (151), Expect(3) = 6e-084
Identities = 28/73 (38%), Positives = 43/73 (58%)
Frame = +2 / +2
Query: 1040 ASKVTVKDVTFKNITGTSSTPEAVNLLCSAKIPCTGVTMDDVNIKYSGTNNKTMAVCKNA 1219
AS V +KDV + NI GTS++ EA+ + CS PC V + ++N+ Y G + A+C+N
Sbjct: 1010 ASHVQIKDVKYNNIWGTSTSKEALKMQCSKTFPCQDVELSNINLHYVGRDGLVTALCENV 1189
Query: 1220 KGSAKGCLKELAC 1258
GS +G + C
Sbjct: 1190 GGSIRGKIVPANC 1228
Score = 30.9 bits (61), Expect(3) = 6e-084
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2 / +2
Query: 293 LNFTGPCKGDVTIQVNGNLLA 355
+ F+GPCK +T + G LLA
Sbjct: 260 VTFSGPCKSSITFFIRGTLLA 322
Score = 29.0 bits (57), Expect(2) = 6e-025
Identities = 19/48 (39%), Positives = 22/48 (45%)
Frame = -2 / -3
Query: 537 TKSITSELGRILQSYFLTQEFLLHTAGPCPSSFPLPVMTRLSTRRISI 394
TK+ + + Q FL Q P PSS P PV RLST SI
Sbjct: 501 TKANPMFIASVRQLVFLLQSLRGQE*DP*PSSNPPPVTVRLSTYLKSI 358
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 185 bits (399), Expect(4) = 1e-062
Identities = 80/167 (47%), Positives = 105/167 (62%)
Frame = +2 / +2
Query: 530 DFVNNGEVSGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITN 709
DFV N ++GIT LNSK H N I VN+ AP +SPNTDGI + SS + I+N
Sbjct: 5866487 DFVKNSSMNGITSLNSKAGHFNFLSVDHFSITRVNIIAPSNSPNTDGIKIALSSNMQISN 5866666
Query: 710 TVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTA 889
T I GDDCI++ G + +I V CGPGHGISIGSLG+ KDEK+V + V++ T
Sbjct: 5866667 THISTGDDCIAMLSGNTNFDIYNVKCGPGHGISIGSLGKNKDEKNVNGLMVRNSVFTGTT 5866846
Query: 890 NGVRIKAYEDAASVLTASKIHYENIKMEDSGYPIIIDMKYCPNKLCT 1030
NG+RIK +E +AS + + YEN++M + PI ID KYCP C+
Sbjct: 5866847 NGIRIKTWESSASTIRIINLVYENLQMINVENPIGIDQKYCPYPPCS 5866987
Score = 168 bits (361), Expect(6) = 6e-084
Identities = 62/132 (46%), Positives = 100/132 (75%)
Frame = +2 / -2
Query: 518 SLVMDFVNNGEVSGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGV 697
SL + N E++GI+ +N+K FHM + K +++ I+++ +TAP +SPNTDGIH+ ++ V
Sbjct: 611588 SLKFRNMKNVEINGISSVNAKAFHMFLVKTENVNIQNIKLTAPAESPNTDGIHLSNADNV 611409
Query: 698 TITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTL 877
+I ++ I GDDC+S+G G++ V + V CGPGHG+S+GSLG+YK+E+DV+ I+V +CT+
Sbjct: 611408 SILDSTIATGDDCVSVGRGSNNVTVERVICGPGHGLSVGSLGKYKNEEDVSGIHVNNCTM 611229
Query: 878 KKTANGVRIKAY 913
+T NG+RIK +
Sbjct: 611228 IETDNGLRIKTW 611193
Score = 117 bits (250), Expect(3) = 4e-049
Identities = 40/85 (47%), Positives = 62/85 (72%)
Frame = +2 / -2
Query: 551 VSGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGD 730
+SG+ +NS+ HM + C ++++++V + APG+SPNTDG H+ S+GVT T + + GD
Sbjct: 1695128 ISGVKSMNSQVTHMTLNGCTNVVVRNVKLVAPGNSPNTDGFHVQHSTGVTFTGSTVQTGD 1694949
Query: 731 DCISIGPGTSKVNITGVTCGPGHGI 805
DC++IGPGT + IT + CGPGHG+
Sbjct: 1694948 DCVAIGPGTRNLLITKLACGPGHGV 1694874
Score = 107 bits (228), Expect(3) = 4e-047
Identities = 37/85 (43%), Positives = 59/85 (69%)
Frame = +2 / -2
Query: 551 VSGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGD 730
+SG+ +NS+ HM + C ++ ++++ + APGDSPNTDG + S+GVT+T + + GD
Sbjct: 1691111 ISGVKSMNSQVSHMTLNGCTNVAVRNIRLVAPGDSPNTDGFTVQFSTGVTLTGSTVQTGD 1690932
Query: 731 DCISIGPGTSKVNITGVTCGPGHGI 805
DC++IG GT I+ + CGPGHG+
Sbjct: 1690931 DCVAIGQGTRNFLISKLACGPGHGV 1690857
Score = 100 bits (214), Expect(3) = 2e-022
Identities = 49/94 (52%), Positives = 59/94 (62%)
Frame = -2 / +1
Query: 912 YALMRTPLAVFLSVQSLTLISVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQ 733
+ L+ PL+V + VQ LT I +TS S LY PRLP L P PGPQ+T TL P P E Q
Sbjct: 611194 HVLILRPLSVSIIVQLLTWIPLTSSSFLYLPRLPTLRPCPGPQITRSTVTLLEPRPTETQ 611373
Query: 732 SSPTPMTVLVMVTPDESPMWMPSVLGLSPGAVTL 631
SSP M + M+T W+PSVLGLS GAV+L
Sbjct: 611374 SSPVAMVLSRMLTLSALLKWIPSVLGLSAGAVSL 611475
Score = 93.6 bits (198), Expect(3) = 4e-047
Identities = 35/94 (37%), Positives = 53/94 (56%)
Frame = +2 / -2
Query: 152 FDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCKGDVTI 331
F++ GA +G TDST A +AW ACG T+++P G FL+ + F GPCK +T
Sbjct: 1691921 FNVVSFGAKPDGVTDSTAAFLKAWQGACGSAASATVVVPTGTFLLKVITFGGPCKSKITF 1691742
Query: 332 QVNGNLLATTDLSQYKDHGNWIEILRVDNLVITG 433
QV G ++A D + + G+WI +V+ + G
Sbjct: 1691741 QVTGTVVAPEDYRTFGNSGSWILFNKVNRFSLVG 1691640
Score = 89.5 bits (189), Expect(3) = 4e-049
Identities = 35/94 (37%), Positives = 52/94 (55%)
Frame = +2 / -3
Query: 152 FDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCKGDVTI 331
F++ GA +G TDST A +AW AC T+++PKG FL+ + F GPCK +T
Sbjct: 1695853 FNVVSFGAKPDGVTDSTGAFLKAWQGACVSASSATVVVPKGTFLLKVITFGGPCKSKITF 1695674
Query: 332 QVNGNLLATTDLSQYKDHGNWIEILRVDNLVITG 433
QV G ++A D + + G WI +V+ + G
Sbjct: 1695673 QVAGTVIAPEDYRTFGNSGFWILFNKVNRFSLVG 1695572
Score = 82.2 bits (173), Expect(2) = 8e-029
Identities = 34/64 (53%), Positives = 43/64 (67%)
Frame = +2 / -1
Query: 725 GDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRI 904
GDDCISI G S V + V CGPGHGISIGSLG+ + V++I V+D + T GVRI
Sbjct: 3515883 GDDCISIQTGCSNVFVHNVNCGPGHGISIGSLGKEGTKACVSNITVRDVAMHNTMTGVRI 3515704
Query: 905 KAYE 916
K ++
Sbjct: 3515703 KTWQ 3515692
Score = 68.9 bits (144), Expect(4) = 1e-062
Identities = 27/69 (39%), Positives = 39/69 (56%)
Frame = +2 / +3
Query: 1031 ANGASKVTVKDVTFKNITGTSSTPEAVNLLCSAKIPCTGVTMDDVNIKYSGTNNKTMAVC 1210
+ G S + +++VT KNI GTS AV CS PC V + D+N+ + G + A+C
Sbjct: 5867076 SQGDSHIQIRNVTLKNIWGTSKNKVAVKFQCSKTFPCKDVQLIDINLTHHGVDGPASALC 5867255
Query: 1211 KNAKGSAKG 1237
+N GSA G
Sbjct: 5867256 ENVDGSATG 5867282
Score = 68.4 bits (143), Expect(2) = 8e-029
Identities = 26/61 (42%), Positives = 41/61 (67%)
Frame = +2 / -1
Query: 548 EVSGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVG 727
EV+GIT+ NS H+ C +++ D+ V++PGDSPNTDGIH+ ++ V I +T + G
Sbjct: 3516138 EVTGITIQNSPQCHLKFDDCVGVVVHDIAVSSPGDSPNTDGIHLQNTKDVLIHSTTLACG 3515959
Query: 728 D 730
+
Sbjct: 3515958 N 3515956
Score = 64.8 bits (135), Expect(6) = 6e-084
Identities = 24/53 (45%), Positives = 31/53 (58%)
Frame = +2 / -1
Query: 203 KAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCKGDVTIQVNGNLLATT 361
+A W C T+L+PKG FL GP+ F GPCK VT+ V G ++ATT
Sbjct: 611982 QAFLNTWIQVCDSPVPATLLVPKGTFLAGPVIFAGPCKSKVTVNVIGTIIATT 611824
Score = 64.3 bits (134), Expect(3) = 4e-049
Identities = 23/46 (50%), Positives = 33/46 (71%)
Frame = +2 / -3
Query: 1043 SKVTVKDVTFKNITGTSSTPEAVNLLCSAKIPCTGVTMDDVNIKYS 1180
S V + VT+KNI GTS+T EA+ L+CS PCTG+T+ D+ + Y+
Sbjct: 1694386 SGVKISQVTYKNIQGTSATQEAMKLVCSKSSPCTGITLQDIKLTYN 1694249
Score = 63.4 bits (132), Expect(3) = 4e-047
Identities = 23/46 (50%), Positives = 33/46 (71%)
Frame = +2 / -2
Query: 1043 SKVTVKDVTFKNITGTSSTPEAVNLLCSAKIPCTGVTMDDVNIKYS 1180
S V + VT+KNI GTS+T EA+ L+CS PCTG+T+ D+ + Y+
Sbjct: 1690364 SGVKITQVTYKNIQGTSATQEAMKLVCSKSNPCTGITLQDIKLTYN 1690227
Score = 62.5 bits (130), Expect(6) = 6e-084
Identities = 22/47 (46%), Positives = 32/47 (68%)
Frame = +2 / -2
Query: 1043 SKVTVKDVTFKNITGTSSTPEAVNLLCSAKIPCTGVTMDDVNIKYSG 1183
S+V + D+ FKNI GT+ T + V ++CS +PC GV + DVN+ Y G
Sbjct: 610991 SQVAISDILFKNIRGTTITKDVVQIMCSKSVPCQGVNVVDVNLDYVG 610851
Score = 59.7 bits (124), Expect(5) = 2e-034
Identities = 25/70 (35%), Positives = 44/70 (62%)
Frame = +2 / +2
Query: 518 SLVMDFVNNGEVSGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGV 697
+L ++ + +VSG+T+ NS+ + + + + + V V++PGDSPNTDGIH+ S+ V
Sbjct: 8328212 ALTIESSSGVKVSGLTIQNSQQMNFIIARSDSVRVSKVMVSSPGDSPNTDGIHITGSTNV 8328391
Query: 698 TITNTVIGVG 727
+ + IG G
Sbjct: 8328392 ILQDCKIGTG 8328421
Score = 56.5 bits (117), Expect(4) = 1e-062
Identities = 22/53 (41%), Positives = 29/53 (54%)
Frame = +2 / +2
Query: 197 STKAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCKGDVTIQVNGNLLA 355
S KA AW AC G + IP G F +G + F GPC G ++ ++G LLA
Sbjct: 5865998 SYKAFTNAWKDACRWNGPSKMYIPLGTFYLGGVTFVGPCDGKISFVIDGTLLA 5866156
Score = 53.8 bits (111), Expect(6) = 6e-084
Identities = 20/41 (48%), Positives = 24/41 (58%)
Frame = +2 / -1
Query: 392 WIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILP 514
W RVDNLV+TG G G+G AVW + C KK C + P
Sbjct: 611802 WFLFERVDNLVLTGTGTFHGKGEAVWKADGCGKKVQCNLPP 611680
Score = 47.8 bits (98), Expect(5) = 2e-034
Identities = 14/44 (31%), Positives = 30/44 (68%)
Frame = +2 / +1
Query: 1043 SKVTVKDVTFKNITGTSSTPEAVNLLCSAKIPCTGVTMDDVNIK 1174
S V + + ++NITGT+ + +A+ CS +PC+ + +++VN++
Sbjct: 8329087 SAVKISQIMYRNITGTTKSAKAIKFACSDTVPCSHIVLNNVNLE 8329218
Score = 43.2 bits (88), Expect(5) = 2e-034
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +2 / +3
Query: 725 GDDCISIGPGTSKVNITGVTCGPGHGI 805
GDDC+SI +S + + + CGPGHGI
Sbjct: 8328510 GDDCVSIVNASSNIKMKNIYCGPGHGI 8328590
Score = 42.3 bits (86), Expect(3) = 2e-022
Identities = 20/47 (42%), Positives = 24/47 (51%)
Frame = -2 / +2
Query: 360 VVASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIVCFPVPPHADAH 220
VVA +P T VT LHGP K++GP + PLG V H H
Sbjct: 611825 VVAMIVPITLTVTLLLHGPAKMTGPAKNVPLGTSSVAGTGLSHTCIH 611965
Score = 39.6 bits (80), Expect(4) = 1e-062
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +2 / +2
Query: 392 WIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDC 502
WI ++ L + G G LDGQG WS C K +C
Sbjct: 5866190 WINFRYINYLTVFGDGTLDGQGKKSWSLIDCQKDNNC 5866300
Score = 38.2 bits (77), Expect(5) = 2e-034
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +2 / +2
Query: 794 GHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAYE 916
G SIGSLG+ VT + + L++T NG+RIK Y+
Sbjct: 8328647 GISCSIGSLGKDNTTGIVTQVVLDTALLRETTNGLRIKTYQ 8328769
Score = 37.3 bits (75), Expect(3) = 2e-022
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = -2 / +2
Query: 516 LGRILQSYFLTQEFLLHTAGPCPSSFPLPVMTRLSTR 406
+G L FL Q TA P P + P+PV TRLSTR
Sbjct: 611678 VGGRLHWTFLPQPSAFQTASPFPWNVPVPVRTRLSTR 611788
Score = 32.2 bits (64), Expect(6) = 6e-084
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +2 / -2
Query: 83 CTVHGEXXXXXXXXXXXXGPGGSFDITKLGASGNGKTDSTK 205
C +GE G +DITK GA G+G T++ K
Sbjct: 612200 CVANGEYLGGRRGLAANSGNPTVYDITKFGAVGDGSTNTFK 612078
Score = 32.2 bits (64), Expect(5) = 2e-034
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2 / +2
Query: 947 IHYENIKMEDSGYPIIIDMKYCPNKLCTANGAS 1045
I + N++M+D PI+ID YC + N S
Sbjct: 8328887 IRFTNVEMQDVANPILIDQFYCDSPTTCQNQVS 8328985
Score = 26.7 bits (52), Expect(6) = 6e-084
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2 / -2
Query: 938 ASKIHYENIKMEDSGYPIIIDMKY 1009
A I +ENI M+ PIIID Y
Sbjct: 611171 AVDIKFENIIMQSVKNPIIIDQNY 611100
>gb|AC022521.4|AC022521 Arabidopsis thaliana chromosome I BAC T14P4 genomic sequence,
complete sequence
Length = 121668
Score = 168 bits (361), Expect(6) = 7e-084
Identities = 62/132 (46%), Positives = 100/132 (75%)
Frame = +2 / +2
Query: 518 SLVMDFVNNGEVSGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGV 697
SL + N E++GI+ +N+K FHM + K +++ I+++ +TAP +SPNTDGIH+ ++ V
Sbjct: 6308 SLKFRNMKNVEINGISSVNAKAFHMFLVKTENVNIQNIKLTAPAESPNTDGIHLSNADNV 6487
Query: 698 TITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTL 877
+I ++ I GDDC+S+G G++ V + V CGPGHG+S+GSLG+YK+E+DV+ I+V +CT+
Sbjct: 6488 SILDSTIATGDDCVSVGRGSNNVTVERVICGPGHGLSVGSLGKYKNEEDVSGIHVNNCTM 6667
Query: 878 KKTANGVRIKAY 913
+T NG+RIK +
Sbjct: 6668 IETDNGLRIKTW 6703
Score = 100 bits (214), Expect(3) = 2e-026
Identities = 49/94 (52%), Positives = 59/94 (62%)
Frame = -2 / -1
Query: 912 YALMRTPLAVFLSVQSLTLISVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQ 733
+ L+ PL+V + VQ LT I +TS S LY PRLP L P PGPQ+T TL P P E Q
Sbjct: 6702 HVLILRPLSVSIIVQLLTWIPLTSSSFLYLPRLPTLRPCPGPQITRSTVTLLEPRPTETQ 6523
Query: 732 SSPTPMTVLVMVTPDESPMWMPSVLGLSPGAVTL 631
SSP M + M+T W+PSVLGLS GAV+L
Sbjct: 6522 SSPVAMVLSRMLTLSALLKWIPSVLGLSAGAVSL 6421
Score = 64.8 bits (135), Expect(6) = 7e-084
Identities = 24/53 (45%), Positives = 31/53 (58%)
Frame = +2 / +1
Query: 203 KAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCKGDVTIQVNGNLLATT 361
+A W C T+L+PKG FL GP+ F GPCK VT+ V G ++ATT
Sbjct: 5914 QAFLNTWIQVCDSPVPATLLVPKGTFLAGPVIFAGPCKSKVTVNVIGTIIATT 6072
Score = 64.3 bits (134), Expect(6) = 2e-025
Identities = 26/63 (41%), Positives = 41/63 (65%)
Frame = +2 / +3
Query: 539 NNGEVSGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVI 718
+N V G+ + NS FH C+ + ++ +++TAP SPNTDGIH+ +S+ VTI N++I
Sbjct: 111807 SNLRVEGLQIKNSPQFHFRFDGCQGVHVESLHITAPPLSPNTDGIHIENSNSVTIYNSII 111986
Query: 719 GVG 727
G
Sbjct: 111987 SNG 111995
Score = 62.5 bits (130), Expect(6) = 7e-084
Identities = 22/47 (46%), Positives = 32/47 (68%)
Frame = +2 / +2
Query: 1043 SKVTVKDVTFKNITGTSSTPEAVNLLCSAKIPCTGVTMDDVNIKYSG 1183
S+V + D+ FKNI GT+ T + V ++CS +PC GV + DVN+ Y G
Sbjct: 6905 SQVAISDILFKNIRGTTITKDVVQIMCSKSVPCQGVNVVDVNLDYVG 7045
Score = 53.8 bits (111), Expect(6) = 7e-084
Identities = 20/41 (48%), Positives = 24/41 (58%)
Frame = +2 / +1
Query: 392 WIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILP 514
W RVDNLV+TG G G+G AVW + C KK C + P
Sbjct: 6094 WFLFERVDNLVLTGTGTFHGKGEAVWKADGCGKKVQCNLPP 6216
Score = 43.7 bits (89), Expect(6) = 2e-025
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +2 / +2
Query: 725 GDDCISIGPGTSKVNITGVTCGPG 796
GDDC+SIG G+ V+I +TCGPG
Sbjct: 112253 GDDCVSIGSGSYDVDIRNLTCGPG 112324
Score = 42.3 bits (86), Expect(3) = 2e-026
Identities = 20/47 (42%), Positives = 24/47 (51%)
Frame = -2 / -2
Query: 360 VVASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIVCFPVPPHADAH 220
VVA +P T VT LHGP K++GP + PLG V H H
Sbjct: 6071 VVAMIVPITLTVTLLLHGPAKMTGPAKNVPLGTSSVAGTGLSHTCIH 5931
Score = 41.8 bits (85), Expect(6) = 2e-025
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +2 / +3
Query: 806 SIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAYE 916
SIGSLG + V++I V+D +K + NGVRIK ++
Sbjct: 112428 SIGSLGNHNSRACVSNITVRDSVIKYSDNGVRIKTWQ 112538
Score = 40.9 bits (83), Expect(6) = 2e-025
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +2 / +3
Query: 146 GSFDITKLGASGNGKTDSTKAVQEAWASAC 235
G +++ K GA G+G+TD T+A + AW S+C
Sbjct: 110997 GIYNVRKYGAVGDGETDDTEAFKTAWDSSC 111086
Score = 37.3 bits (75), Expect(3) = 2e-026
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = -2 / -2
Query: 516 LGRILQSYFLTQEFLLHTAGPCPSSFPLPVMTRLSTR 406
+G L FL Q TA P P + P+PV TRLSTR
Sbjct: 6218 VGGRLHWTFLPQPSAFQTASPFPWNVPVPVRTRLSTR 6108
Score = 32.2 bits (64), Expect(6) = 7e-084
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +2 / +2
Query: 83 CTVHGEXXXXXXXXXXXXGPGGSFDITKLGASGNGKTDSTK 205
C +GE G +DITK GA G+G T++ K
Sbjct: 5696 CVANGEYLGGRRGLAANSGNPTVYDITKFGAVGDGSTNTFK 5818
Score = 30.9 bits (61), Expect(6) = 2e-025
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +2 / +1
Query: 392 WIEILRVDNLVITGKGKLDGQGPAVW 469
W+ RV+ + + G+G +DG+G W
Sbjct: 111370 WLVFYRVNGMALKGEGVIDGRGQKWW 111447
Score = 30.4 bits (60), Expect(6) = 2e-025
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2 / +3
Query: 935 TASKIHYENIKMEDSGYPIIIDMKYCPNKLC 1027
+ S + + NI ++ PIIID YC K C
Sbjct: 112551 SVSGVTFNNIHVDSVRNPIIIDQYYCMTKDC 112643
Score = 26.7 bits (52), Expect(6) = 7e-084
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2 / +2
Query: 938 ASKIHYENIKMEDSGYPIIIDMKY 1009
A I +ENI M+ PIIID Y
Sbjct: 6725 AVDIKFENIIMQSVKNPIIIDQNY 6796
>gb|AC009525.3| Arabidopsis thaliana chromosome I BAC F22D16 genomic sequence, complete
sequence
Length = 100239
Score = 168 bits (361), Expect(6) = 7e-084
Identities = 62/132 (46%), Positives = 100/132 (75%)
Frame = +2 / +2
Query: 518 SLVMDFVNNGEVSGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGV 697
SL + N E++GI+ +N+K FHM + K +++ I+++ +TAP +SPNTDGIH+ ++ V
Sbjct: 80948 SLKFRNMKNVEINGISSVNAKAFHMFLVKTENVNIQNIKLTAPAESPNTDGIHLSNADNV 81127
Query: 698 TITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTL 877
+I ++ I GDDC+S+G G++ V + V CGPGHG+S+GSLG+YK+E+DV+ I+V +CT+
Sbjct: 81128 SILDSTIATGDDCVSVGRGSNNVTVERVICGPGHGLSVGSLGKYKNEEDVSGIHVNNCTM 81307
Query: 878 KKTANGVRIKAY 913
+T NG+RIK +
Sbjct: 81308 IETDNGLRIKTW 81343
Score = 100 bits (214), Expect(3) = 2e-026
Identities = 49/94 (52%), Positives = 59/94 (62%)
Frame = -2 / -1
Query: 912 YALMRTPLAVFLSVQSLTLISVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQ 733
+ L+ PL+V + VQ LT I +TS S LY PRLP L P PGPQ+T TL P P E Q
Sbjct: 81342 HVLILRPLSVSIIVQLLTWIPLTSSSFLYLPRLPTLRPCPGPQITRSTVTLLEPRPTETQ 81163
Query: 732 SSPTPMTVLVMVTPDESPMWMPSVLGLSPGAVTL 631
SSP M + M+T W+PSVLGLS GAV+L
Sbjct: 81162 SSPVAMVLSRMLTLSALLKWIPSVLGLSAGAVSL 81061
Score = 64.8 bits (135), Expect(6) = 7e-084
Identities = 24/53 (45%), Positives = 31/53 (58%)
Frame = +2 / +1
Query: 203 KAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCKGDVTIQVNGNLLATT 361
+A W C T+L+PKG FL GP+ F GPCK VT+ V G ++ATT
Sbjct: 80554 QAFLNTWIQVCDSPVPATLLVPKGTFLAGPVIFAGPCKSKVTVNVIGTIIATT 80712
Score = 62.5 bits (130), Expect(6) = 7e-084
Identities = 22/47 (46%), Positives = 32/47 (68%)
Frame = +2 / +2
Query: 1043 SKVTVKDVTFKNITGTSSTPEAVNLLCSAKIPCTGVTMDDVNIKYSG 1183
S+V + D+ FKNI GT+ T + V ++CS +PC GV + DVN+ Y G
Sbjct: 81545 SQVAISDILFKNIRGTTITKDVVQIMCSKSVPCQGVNVVDVNLDYVG 81685
Score = 53.8 bits (111), Expect(6) = 7e-084
Identities = 20/41 (48%), Positives = 24/41 (58%)
Frame = +2 / +1
Query: 392 WIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILP 514
W RVDNLV+TG G G+G AVW + C KK C + P
Sbjct: 80734 WFLFERVDNLVLTGTGTFHGKGEAVWKADGCGKKVQCNLPP 80856
Score = 42.3 bits (86), Expect(3) = 2e-026
Identities = 20/47 (42%), Positives = 24/47 (51%)
Frame = -2 / -2
Query: 360 VVASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIVCFPVPPHADAH 220
VVA +P T VT LHGP K++GP + PLG V H H
Sbjct: 80711 VVAMIVPITLTVTLLLHGPAKMTGPAKNVPLGTSSVAGTGLSHTCIH 80571
Score = 37.3 bits (75), Expect(3) = 2e-026
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = -2 / -2
Query: 516 LGRILQSYFLTQEFLLHTAGPCPSSFPLPVMTRLSTR 406
+G L FL Q TA P P + P+PV TRLSTR
Sbjct: 80858 VGGRLHWTFLPQPSAFQTASPFPWNVPVPVRTRLSTR 80748
Score = 32.2 bits (64), Expect(6) = 7e-084
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +2 / +2
Query: 83 CTVHGEXXXXXXXXXXXXGPGGSFDITKLGASGNGKTDSTK 205
C +GE G +DITK GA G+G T++ K
Sbjct: 80336 CVANGEYLGGRRGLAANSGNPTVYDITKFGAVGDGSTNTFK 80458
Score = 26.7 bits (52), Expect(6) = 7e-084
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2 / +2
Query: 938 ASKIHYENIKMEDSGYPIIIDMKY 1009
A I +ENI M+ PIIID Y
Sbjct: 81365 AVDIKFENIIMQSVKNPIIIDQNY 81436
>emb|Y16230.1|ATPGA3GE Arabidopsis thaliana PGA3 gene
Length = 2469
Score = 168 bits (361), Expect(6) = 8e-084
Identities = 62/132 (46%), Positives = 100/132 (75%)
Frame = +2 / +2
Query: 518 SLVMDFVNNGEVSGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGV 697
SL + N E++GI+ +N+K FHM + K +++ I+++ +TAP +SPNTDGIH+ ++ V
Sbjct: 1172 SLKFRNMKNVEINGISSVNAKAFHMFLVKTENVNIQNIKLTAPAESPNTDGIHLSNADNV 1351
Query: 698 TITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTL 877
+I ++ I GDDC+S+G G++ V + V CGPGHG+S+GSLG+YK+E+DV+ I+V +CT+
Sbjct: 1352 SILDSTIATGDDCVSVGRGSNNVTVERVICGPGHGLSVGSLGKYKNEEDVSGIHVNNCTM 1531
Query: 878 KKTANGVRIKAY 913
+T NG+RIK +
Sbjct: 1532 IETDNGLRIKTW 1567
Score = 100 bits (214), Expect(3) = 1e-029
Identities = 49/94 (52%), Positives = 59/94 (62%)
Frame = -2 / -1
Query: 912 YALMRTPLAVFLSVQSLTLISVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQ 733
+ L+ PL+V + VQ LT I +TS S LY PRLP L P PGPQ+T TL P P E Q
Sbjct: 1566 HVLILRPLSVSIIVQLLTWIPLTSSSFLYLPRLPTLRPCPGPQITRSTVTLLEPRPTETQ 1387
Query: 732 SSPTPMTVLVMVTPDESPMWMPSVLGLSPGAVTL 631
SSP M + M+T W+PSVLGLS GAV+L
Sbjct: 1386 SSPVAMVLSRMLTLSALLKWIPSVLGLSAGAVSL 1285
Score = 64.8 bits (135), Expect(6) = 8e-084
Identities = 24/53 (45%), Positives = 31/53 (58%)
Frame = +2 / +1
Query: 203 KAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCKGDVTIQVNGNLLATT 361
+A W C T+L+PKG FL GP+ F GPCK VT+ V G ++ATT
Sbjct: 778 QAFLNTWIQVCDSPVPATLLVPKGTFLAGPVIFAGPCKSKVTVNVIGTIIATT 936
Score = 62.5 bits (130), Expect(6) = 8e-084
Identities = 22/47 (46%), Positives = 32/47 (68%)
Frame = +2 / +2
Query: 1043 SKVTVKDVTFKNITGTSSTPEAVNLLCSAKIPCTGVTMDDVNIKYSG 1183
S+V + D+ FKNI GT+ T + V ++CS +PC GV + DVN+ Y G
Sbjct: 1769 SQVAISDILFKNIRGTTITKDVVQIMCSKSVPCQGVNVVDVNLDYVG 1909
Score = 53.8 bits (111), Expect(6) = 8e-084
Identities = 20/41 (48%), Positives = 24/41 (58%)
Frame = +2 / +1
Query: 392 WIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILP 514
W RVDNLV+TG G G+G AVW + C KK C + P
Sbjct: 958 WFLFERVDNLVLTGTGTFHGKGEAVWKADGCGKKVQCNLPP 1080
Score = 42.3 bits (86), Expect(3) = 1e-029
Identities = 20/47 (42%), Positives = 24/47 (51%)
Frame = -2 / -2
Query: 360 VVASRLPFTWMVTSPLHGPVKLSGPTRKSPLGMRIVCFPVPPHADAH 220
VVA +P T VT LHGP K++GP + PLG V H H
Sbjct: 935 VVAMIVPITLTVTLLLHGPAKMTGPAKNVPLGTSSVAGTGLSHTCIH 795
Score = 37.3 bits (75), Expect(3) = 1e-029
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = -2 / -2
Query: 516 LGRILQSYFLTQEFLLHTAGPCPSSFPLPVMTRLSTR 406
+G L FL Q TA P P + P+PV TRLSTR
Sbjct: 1082 VGGRLHWTFLPQPSAFQTASPFPWNVPVPVRTRLSTR 972
Score = 32.2 bits (64), Expect(6) = 8e-084
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +2 / +2
Query: 83 CTVHGEXXXXXXXXXXXXGPGGSFDITKLGASGNGKTDSTK 205
C +GE G +DITK GA G+G T++ K
Sbjct: 560 CVANGEYLGGRRGLAANSGNPTVYDITKFGAVGDGSTNTFK 682
Score = 26.7 bits (52), Expect(6) = 8e-084
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2 / +2
Query: 938 ASKIHYENIKMEDSGYPIIIDMKY 1009
A I +ENI M+ PIIID Y
Sbjct: 1589 AVDIKFENIIMQSVKNPIIIDQNY 1660
>ref|NM_127107.2| Arabidopsis thaliana polygalacturonase AT2G15470 mRNA, complete cds
Length = 1215
Score = 255 bits (552), Expect(3) = 2e-083
Identities = 106/212 (50%), Positives = 134/212 (63%)
Frame = +2 / +1
Query: 392 WIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGITLL 571
WI ++NL I+G G LDGQG W N C +C L ++ FVNN + IT L
Sbjct: 331 WINFRYINNLSISGSGTLDGQGKQSWPHNDCHTNPNCPKLAMTMGFAFVNNSNIKDITSL 510
Query: 572 NSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGP 751
NSK H N + I V +TAPGDSPNTDGI MG S + I++T IG GDDCI+I
Sbjct: 511 NSKMGHFNFFSVHHFNITGVTITAPGDSPNTDGIKMGSCSNIQISDTNIGTGDDCIAILS 690
Query: 752 GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAYEDAASV 931
GT+ +NI+ V CGPGHGIS+GSLG+ KDEKD D+ V+D T++G+RIK +E +AS
Sbjct: 691 GTTNLNISNVNCGPGHGISVGSLGKNKDEKDAKDLIVRDVIFNGTSDGIRIKTWESSASK 870
Query: 932 LTASKIHYENIKMEDSGYPIIIDMKYCPNKLC 1027
+ S YENI+M D G PI ID KYCP+ C
Sbjct: 871 ILVSNFVYENIQMIDVGKPINIDQKYCPHPPC 966
Score = 122 bits (261), Expect(2) = 2e-027
Identities = 64/132 (48%), Positives = 82/132 (62%)
Frame = -2 / -2
Query: 1014 GQYFMSMMMG*PESSILIFS*WILEAVSTEAASSYALMRTPLAVFLSVQSLTLISVTSFS 835
GQYF SM++G P S I IFS E EA S L+R P V L + SLT+ S SFS
Sbjct: 953 GQYF*SMLIGFPTSII*IFSYTKFETRIFEAEDSQVLIRIPSLVPLKMTSLTIKSFASFS 774
Query: 834 SLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVTPDESPMWMPSVLG 655
SL+ P+LP L+P PGPQ+T + L VP + +QSSP PM V + P+ +PSVLG
Sbjct: 773 SLFFPKLPTLIPCPGPQLTLEILRLVVPERIAIQSSPVPMFVSEI*MLLHEPILIPSVLG 594
Query: 654 LSPGAVTLTSLI 619
LSPGAV +T ++
Sbjct: 593 LSPGAVIVTPVM 558
Score = 53.8 bits (111), Expect(3) = 2e-083
Identities = 22/52 (42%), Positives = 31/52 (59%)
Frame = +2 / +1
Query: 1037 GASKVTVKDVTFKNITGTSSTPEAVNLLCSAKIPCTGVTMDDVNIKYSGTNN 1192
G S V ++++ KNI GTS A+NL CS PC V + D+NIK +G +
Sbjct: 982 GESHVQIQNLKLKNIYGTSKNKVAMNLQCSKIFPCKNVELIDINIKQNGVKD 1137
Score = 43.2 bits (88), Expect(3) = 2e-083
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +2 / +1
Query: 242 TGKQTILIPKGDFLVGPLNFTGPCKGDVTIQVNGNLLATTDLSQYK 379
+G I +PKG F +G + F G CK + ++G LLA + S K
Sbjct: 184 SGSSKIYVPKGTFYLGGVEFVGLCKNPIEFIIDGTLLAPANPSDIK 321
Score = 23.5 bits (45), Expect(2) = 2e-027
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -2 / -2
Query: 543 LFTKSITSELGRILQSYFLTQEFLLHTAGPCPSSFPLPVMTRL 415
LFT + + + Q F+ Q P PSS P P + RL
Sbjct: 482 LFTNANPIVIASLGQLGFVWQSLCGQDCFPWPSSVPEPEIERL 354
>dbj|AB023039.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MIF21
Length = 59372
Score = 224 bits (483), Expect(4) = 1e-078
Identities = 88/181 (48%), Positives = 124/181 (68%)
Frame = +2 / -2
Query: 506 ILPNSLVMDFVNNGEVSGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGD 685
IL S+ DFV + ++ GIT L++K FH+N+ K++ +DV + AP +SPNTDGIH+G
Sbjct: 11455 ILEQSIRFDFVTDAKIRGITSLDAKHFHINVIGAKNVTFEDVKIIAPAESPNTDGIHVGR 11276
Query: 686 SSGVTITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVK 865
S G+ I N+ I GDDC+S+G G + + VTCGPGHGISIGSLGRY E++V+ I +
Sbjct: 11275 SDGIKIINSFISTGDDCVSVGDGMKNLLVERVTCGPGHGISIGSLGRYSHEENVSGIKII 11096
Query: 866 DCTLKKTANGVRIKAYEDAASVLTASKIHYENIKMEDSGYPIIIDMKYCPNKLCTANGAS 1045
+CTL++T NG+RIK + AA TAS IH+ENI +++ PI+ID +YCP C +
Sbjct: 11095 NCTLQETDNGLRIKTWPSAACTTTASDIHFENILLKNVSNPILIDQEYCPWNQCNKQVRT 10916
Query: 1046 K 1048
K
Sbjct: 10915 K 10913
Score = 116 bits (249), Expect(2) = 3e-028
Identities = 54/113 (47%), Positives = 71/113 (62%)
Frame = -2 / +3
Query: 963 IFS*WILEAVSTEAASSYALMRTPLAVFLSVQSLTLISVTSFSSLYRPRLPMLMPWPGPQ 784
+FS WI EAV +AA + L+ PL+V VQ + L+ +T S LY PRLP+L+P PGP
Sbjct: 10998 MFSKWISEAVVVQAAEGHVLILRPLSVSWRVQLMILMPLTFSSWLYLPRLPILIPCPGPH 11177
Query: 783 VTPVMFTLEVPGPMEMQSSPTPMTVLVMVTPDESPMWMPSVLGLSPGAVTLTS 625
VT +P P E QSSP + L+++ P P W+PSVLGLS GA+ LTS
Sbjct: 11178 VTLSTRRFFIPSPTETQSSPVEINELMILIPSLLPTWIPSVLGLSAGAMILTS 11336
Score = 63.8 bits (133), Expect(4) = 1e-078
Identities = 27/72 (37%), Positives = 37/72 (51%)
Frame = +2 / -3
Query: 1043 SKVTVKDVTFKNITGTSSTPEAVNLLCSAKIPCTGVTMDDVNIKYSGTNNKTMAVCKNAK 1222
S + + +++FK I GTS +AV LLCS PC V + DVNI+Y+G + C N
Sbjct: 10767 STIKLANISFKKIRGTSGNKDAVKLLCSKGYPCQNVEVGDVNIQYTGADGPATFQCSNVS 10588
Query: 1223 GSAKGCLKELAC 1258
G AC
Sbjct: 10587 PKLVGTQIPKAC 10552
Score = 46.9 bits (96), Expect(4) = 1e-078
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +2 / -3
Query: 392 WIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILP 514
W+ ++ + G G DG+G A W N+C K ++CK LP
Sbjct: 11649 WVAFRNINGFKLNGGGVFDGEGNAAWRVNNCHKTFNCKKLP 11527
Score = 46.0 bits (94), Expect(4) = 1e-078
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +2 / -3
Query: 206 AVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCKGDVTIQVNGNLLA 355
A+ +A+ AC K T++IPKG++ +G + GPCK + I + G + A
Sbjct: 11826 ALLKAFNEACQFPTKSTVMIPKGEYKLGEIVMMGPCKAPIRIALLGTVKA 11677
Score = 31.8 bits (63), Expect(2) = 3e-028
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = -1 / +2
Query: 1012 AVLHVDDDGVARVLHLDILIVDL 944
AVL VD+DGVA VL D+L +D+
Sbjct: 10949 AVLLVDEDGVADVLEEDVLEMDI 11017
>emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long arm
Length = 14497843
Score = 217 bits (468), Expect(4) = 7e-066
Identities = 88/165 (53%), Positives = 112/165 (67%)
Frame = +2 / +3
Query: 533 FVNNGEVSGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNT 712
FVNN + IT LNSK H N + I V +TAPG+SPNTDGI MG S + I+NT
Sbjct: 3901554 FVNNSNIKDITSLNSKMGHFNFFSVHHFNITGVTITAPGNSPNTDGIKMGSCSNIHISNT 3901733
Query: 713 VIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTAN 892
IG GDDCI+I GT+ ++I+ V CGPGHGIS+GSLG+ KDEKDV D+ ++D T++
Sbjct: 3901734 NIGTGDDCIAILSGTTNLDISNVNCGPGHGISVGSLGKNKDEKDVKDLTIRDVIFNGTSD 3901913
Query: 893 GVRIKAYEDAASVLTASKIHYENIKMEDSGYPIIIDMKYCPNKLC 1027
G+RIK +E +AS + S YENI+M D G PI ID KYCP+ C
Sbjct: 3901914 GIRIKTWESSASKILVSNFLYENIQMIDVGKPINIDQKYCPHPPC 3902048
Score = 125 bits (267), Expect(2) = 4e-027
Identities = 66/132 (50%), Positives = 82/132 (62%)
Frame = -2 / -1
Query: 1014 GQYFMSMMMG*PESSILIFS*WILEAVSTEAASSYALMRTPLAVFLSVQSLTLISVTSFS 835
GQYF SM++G P S I IFS E EA S L+R P V L + SL + S TSFS
Sbjct: 3902035 GQYF*SMLIGFPTSII*IFSYKKFETRIFEAEDSQVLIRIPSLVPLKITSLIVKSFTSFS 3901856
Query: 834 SLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVTPDESPMWMPSVLG 655
SL+ P+LP L+P PGPQ+T + L VP M +QSSP PM VL M P+ +PSVLG
Sbjct: 3901855 SLFFPKLPTLIPCPGPQLTLEISRLVVPESMAIQSSPVPMFVLEM*MLLHEPILIPSVLG 3901676
Query: 654 LSPGAVTLTSLI 619
L PGAV +T ++
Sbjct: 3901675 LLPGAVIVTPVM 3901640
Score = 119 bits (254), Expect(5) = 2e-077
Identities = 46/90 (51%), Positives = 62/90 (68%)
Frame = +2 / +1
Query: 536 VNNGEVSGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTV 715
+N V I+ +NSKFFH+ + +C+D +N+TAP DSPNTDGIH+ SS V + +
Sbjct: 5979142 MNRTVVRRISSVNSKFFHIALVECRDFKGTRLNITAPSDSPNTDGIHIERSSNVYFSRSH 5979321
Query: 716 IGVGDDCISIGPGTSKVNITGVTCGPGHGI 805
I GDDC+SIG G S++ IT + CGPGHGI
Sbjct: 5979322 IATGDDCVSIGQGNSQITITSIKCGPGHGI 5979411
Score = 90.9 bits (192), Expect(5) = 2e-077
Identities = 36/77 (46%), Positives = 50/77 (64%)
Frame = +2 / +2
Query: 806 SIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAYEDAASVLTASKIHYENIKMEDSGY 985
S+GSLGRY +EKDV + VKDC + T NG+RIK + ++ + A+ + +ENI M +
Sbjct: 5979497 SVGSLGRYPNEKDVNGLVVKDCKISGTTNGIRIKTWANSPGLSAATNMTFENIIMNNVTN 5979676
Query: 986 PIIIDMKYCPNKLCTAN 1036
PIIID YCP C +N
Sbjct: 5979677 PIIIDQSYCPFSSCISN 5979727
Score = 71.6 bits (150), Expect(5) = 2e-077
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +2 / +1
Query: 341 GNLLATTDLSQYKDHGNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILP 514
G+L A+TDLS+Y+ G WI+ ++ L +TG G DGQG W N+C +CK+LP
Sbjct: 5978872 GHLKASTDLSKYRSGGGWIQFGWINGLTLTGGGTFDGQGALAWPFNNCTSDSNCKLLP 5979045
Score = 55.1 bits (114), Expect(6) = 5e-022
Identities = 22/61 (36%), Positives = 38/61 (62%)
Frame = +2 / +3
Query: 554 SGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDD 733
+G+T +NS H+++ C ++ + + ++ AP DSPNTDGI + S+ + I N+ I G
Sbjct: 11542608 NGLTQMNSPKNHISILDCTNVTLSNFHLIAPKDSPNTDGIDIAHSNNIRIFNSSIQTGML 11542787
Query: 734 C 736
C
Sbjct: 11542788 C 11542790
Score = 53.3 bits (110), Expect(6) = 5e-022
Identities = 22/60 (36%), Positives = 31/60 (51%)
Frame = +2 / +2
Query: 1040 ASKVTVKDVTFKNITGTSSTPEAVNLLCSAKIPCTGVTMDDVNIKYSGTNNKTMAVCKNA 1219
A+ V V DVTF++ TGT + P A+ L C C + M+ +NI S + CK A
Sbjct: 11547803 ATAVKVSDVTFRSFTGTCAAPIAIKLDCDPNTGCDNIVMEQINIASSSPKTPLTSYCKFA 11547982
Score = 53.3 bits (110), Expect(4) = 7e-066
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +2 / +3
Query: 1037 GASKVTVKDVTFKNITGTSSTPEAVNLLCSAKIPCTGVTMDDVNIKYSG 1183
G S V ++++ KNI GTS AVNL CS + PC + + D+NI +G
Sbjct: 3902154 GESHVQIQNLKLKNIYGTSKNKVAVNLQCSKRFPCKNIELIDINITNNG 3902300
Score = 50.6 bits (104), Expect(6) = 5e-022
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +2 / +3
Query: 725 GDDCISIGPGTSKVNITGVTCGPGHGI 805
GDDCI+I G+ +NIT V CGPGHGI
Sbjct: 11542896 GDDCIAINGGSYDINITHVACGPGHGI 11542976
Score = 49.6 bits (102), Expect(5) = 2e-077
Identities = 21/49 (42%), Positives = 33/49 (67%)
Frame = +2 / +2
Query: 1043 SKVTVKDVTFKNITGTSSTPEAVNLLCSAKIPCTGVTMDDVNIKYSGTN 1189
SKV + ++ FKNI GTSS+ AV L CS +PC V +++V++ S ++
Sbjct: 5979818 SKVELSEIYFKNIRGTSSSLVAVQLHCSRGMPCKKVYLENVHLDLSSSD 5979964
Score = 46.9 bits (96), Expect(4) = 7e-066
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +2 / +3
Query: 242 TGKQTILIPKGDFLVGPLNFTGPCKGDVTIQVNGNLLATTDLSQYK 379
+G I +PKG F +G + F GPCK + ++G LLA + + K
Sbjct: 3901083 SGSSKIYVPKGTFYLGGVEFVGPCKNPIEFLIDGTLLAPANPNNIK 3901220
Score = 44.1 bits (90), Expect(4) = 7e-066
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +2 / +3
Query: 392 WIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDC 502
WI+ +++L I+G G LDGQG W N C K +C
Sbjct: 3901230 WIKFKYINDLSISGSGTLDGQGKQSWPLNDCHKNPNC 3901340
Score = 42.3 bits (86), Expect(6) = 5e-022
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +2 / +1
Query: 806 SIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAY 913
SIGSLGRY V ++ ++ C+ T NG RIK +
Sbjct: 11543260 SIGSLGRYSVNDTVQNVKIRHCSFNGTENGARIKTW 11543367
Score = 39.1 bits (79), Expect(6) = 5e-022
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2 / +1
Query: 938 ASKIHYENIKMEDSGYPIIIDMKYC 1012
A I YENI + D+ YPIIID YC
Sbjct: 11543506 AKNILYENITLTDTKYPIIIDQHYC 11543580
Score = 37.3 bits (75), Expect(2) = 4e-027
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = -2 / -2
Query: 1164 TSSMVTPVHGILAEQSRLTASGVEEVPVMFLKVTSLTVTLE 1042
T S T +HGI Q TA+ ++VP++FLK SL+ T E
Sbjct: 5979939 TFSKYTFLHGIPLLQCSCTATSEDDVPLIFLKYISLSSTFE 5979817
Score = 36.8 bits (74), Expect(5) = 2e-077
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +2 / +2
Query: 257 ILIPKGDFLVGPLNFTGPCKGDVTIQVNGNLLATT 361
++IP+G+F VG L F+GPC + V ++ +T
Sbjct: 5978693 LIIPRGEFSVGSLRFSGPCTNVSNLTVRVKVVLST 5978797
Score = 33.6 bits (67), Expect(6) = 5e-022
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2 / +1
Query: 377 KDHGNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKK 493
K++ +W+ V+ LVI G G L+ G A W S K+
Sbjct: 11539027 KENRSWLGFKDVEGLVINGSGVLNPHGEAWWKSVSLSKR 11539143
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 2,486,634,011
Number of Sequences: 1013581
Number of extensions: 33284942
Number of successful extensions: 194725
Number of sequences better than 1.0e-020: 253
length of database: 302,980,290
effective HSP length: 58
effective length of database: 244,192,592
effective search space used: 110863436768
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)