TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2594405.2.1
(637 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 258 2e-067
gb|AC004122.1| Arabidopsis thaliana chromosome I BAC T27I1 ... 258 2e-067
ref|NM_100879.2| Arabidopsis thaliana hydrolase, hydrolyzin... 258 2e-067
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 258 2e-067
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 247 2e-066
gb|AC008051.3|F19C14 Sequence of BAC F19C14 from Arabidopsi... 247 2e-066
dbj|AB077822.1| Arabidopsis thaliana genomic DNA, chromosom... 247 2e-066
gb|AC082643.6|AC082643 Arabidopsis thaliana chromosome 1 BA... 247 2e-066
dbj|AB008015.1| Arabidopsis thaliana RXF12 mRNA, complete cds 247 2e-066
ref|NM_104617.2| Arabidopsis thaliana RXF12; hydrolase, hyd... 247 2e-066
emb|CR360785.1| Arabidopsis thaliana T-DNA flanking sequenc... 245 1e-063
ref|NM_116885.3| Arabidopsis thaliana hydrolase, hydrolyzin... 244 2e-063
emb|CR360784.1| Arabidopsis thaliana T-DNA flanking sequenc... 243 3e-063
gb|BT005962.1| Arabidopsis thaliana At4g08160 gene, complet... 243 5e-063
dbj|AK117349.1| Arabidopsis thaliana At4g08160 mRNA for put... 243 5e-063
ref|NM_001036516.1| Arabidopsis thaliana hydrolase, hydroly... 131 6e-059
gb|AC006267.1| Arabidopsis thaliana BAC F9M13 from chromoso... 131 7e-057
emb|AL161510.2|ATCHRIV22 Arabidopsis thaliana DNA chromosom... 131 1e-056
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 131 9e-055
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 131 1e-054
emb|BX828318.1|CNS0A4BA Arabidopsis thaliana Full-length cD... 110 4e-049
gb|AV540933.1|AV540933 AV540933 Arabidopsis thaliana roots ... 171 1e-041
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 258 bits (557), Expect = 2e-067
Identities = 99/151 (65%), Positives = 124/151 (82%)
Frame = -2 / +1
Query: 633 RGAPVGGIGVQGHISHPVGEIICDSLDKLAILGLPIWITELDVTAENEHIRADDLEVFLR 454
+GAPVGGIG+QGHI+ PVG I+ +LDKL+ LGLPIW TELDV++ NEHIR DDLEV L
Sbjct: 3282778 KGAPVGGIGIQGHITSPVGHIVRSALDKLSTLGLPIWFTELDVSSTNEHIRGDDLEVMLW 3282957
Query: 453 EAFAHPAVGGIILWGFWEMFMFREHAHLVDADGTINEAGRRYLALKQEWLTRMNGSVDHQ 274
EAFAHPAV G++LWGFWE+FM REH+HLV+ADG +NEAG+R+L +K+EWL+ ++G ++
Sbjct: 3282958 EAFAHPAVEGVMLWGFWELFMSREHSHLVNADGEVNEAGKRFLEIKREWLSFVDGEIEDG 3283137
Query: 273 GEFKFRGYHGSYTVEVNTPSGKVARSFVVDK 181
G +FRGYHGSYTVEV T K +FVVDK
Sbjct: 3283138 GGLEFRGYHGSYTVEVVTSESKYVTNFVVDK 3283230
Score = 133 bits (284), Expect = 7e-030
Identities = 72/152 (47%), Positives = 85/152 (55%)
Frame = +2 / -2
Query: 176 LSLSTTNDLATLPEGVFTSTVYEPWYPLNLNSPW*STLPFIRVSHSCLRARYLLPASLIV 355
L LSTT + L V TSTV P PLN N P S P +++HS L +R L PASL
Sbjct: 3283235 LPLSTTKFVTYLLSDVTTSTV*LP**PLNSNPPPSSISPSTKLNHSRLISRNLFPASLTS 3283056
Query: 356 PSASTRWACSRNINISQNPQRMIPPTAGCXXXXXXXXXXXXXXMCSFSAVTSNSVIQIGR 535
PSA T+ CS IN SQNPQ + P TAG +CS TS+SV QIG
Sbjct: 3283055 PSAFTKCECSLLINSSQNPQSITPSTAG*AKASHSITSRSSPLICSLVEDTSSSVNQIGN 3282876
Query: 536 PSMASLSRESHMISPTGWLI*PCTPIPPTGAP 631
PS+ SLS+ + PTG +I P PIPPTGAP
Sbjct: 3282875 PSVLSLSKAERTM*PTGLVICP*IPIPPTGAP 3282780
Score = 107 bits (228), Expect = 4e-022
Identities = 55/132 (41%), Positives = 78/132 (59%)
Frame = +1 / -1
Query: 226 HFHCVRTMVSSELKLSLVIDTAVHTGQPLLFESKVPPASLVDCPISIDQMGVLSKHKHLP 405
+FHCV M++S+L+ S +++ +VH QPL F+ + P S V+ I I QM V S HK LP
Sbjct: 3283185 NFHCVTPMITSKLQSSSILNLSVHKTQPLAFDLQKPLPSFVNLTICIHQM*VFSAHKQLP 3283006
Query: 406 ESPEDDSPHSRMCKCFPEEHL*IISSYVLVLCCDIQLSNPDRETQYGELVQGITYDFSYR 585
ESP+ S + RM K FP HL*II SY+ V I+ PDR ++ LV T D +
Sbjct: 3283005 ESPKHHSFNCRMSKGFP*HHL*IIPSYMFVSRGHIKFCEPDR*SECA*LV*SRTNDVTDG 3282826
Query: 586 MADMTLHTDPTN 621
M+L+ D ++
Sbjct: 3282825 AGYMSLNPDSSH 3282790
>gb|AC004122.1| Arabidopsis thaliana chromosome I BAC T27I1 genomic sequence, complete
sequence
Length = 67878
Score = 258 bits (557), Expect = 2e-067
Identities = 99/151 (65%), Positives = 124/151 (82%)
Frame = -2 / +1
Query: 633 RGAPVGGIGVQGHISHPVGEIICDSLDKLAILGLPIWITELDVTAENEHIRADDLEVFLR 454
+GAPVGGIG+QGHI+ PVG I+ +LDKL+ LGLPIW TELDV++ NEHIR DDLEV L
Sbjct: 28270 KGAPVGGIGIQGHITSPVGHIVRSALDKLSTLGLPIWFTELDVSSTNEHIRGDDLEVMLW 28449
Query: 453 EAFAHPAVGGIILWGFWEMFMFREHAHLVDADGTINEAGRRYLALKQEWLTRMNGSVDHQ 274
EAFAHPAV G++LWGFWE+FM REH+HLV+ADG +NEAG+R+L +K+EWL+ ++G ++
Sbjct: 28450 EAFAHPAVEGVMLWGFWELFMSREHSHLVNADGEVNEAGKRFLEIKREWLSFVDGEIEDG 28629
Query: 273 GEFKFRGYHGSYTVEVNTPSGKVARSFVVDK 181
G +FRGYHGSYTVEV T K +FVVDK
Sbjct: 28630 GGLEFRGYHGSYTVEVVTSESKYVTNFVVDK 28722
Score = 133 bits (284), Expect = 7e-030
Identities = 72/152 (47%), Positives = 85/152 (55%)
Frame = +2 / -2
Query: 176 LSLSTTNDLATLPEGVFTSTVYEPWYPLNLNSPW*STLPFIRVSHSCLRARYLLPASLIV 355
L LSTT + L V TSTV P PLN N P S P +++HS L +R L PASL
Sbjct: 28727 LPLSTTKFVTYLLSDVTTSTV*LP**PLNSNPPPSSISPSTKLNHSRLISRNLFPASLTS 28548
Query: 356 PSASTRWACSRNINISQNPQRMIPPTAGCXXXXXXXXXXXXXXMCSFSAVTSNSVIQIGR 535
PSA T+ CS IN SQNPQ + P TAG +CS TS+SV QIG
Sbjct: 28547 PSAFTKCECSLLINSSQNPQSITPSTAG*AKASHSITSRSSPLICSLVEDTSSSVNQIGN 28368
Query: 536 PSMASLSRESHMISPTGWLI*PCTPIPPTGAP 631
PS+ SLS+ + PTG +I P PIPPTGAP
Sbjct: 28367 PSVLSLSKAERTM*PTGLVICP*IPIPPTGAP 28272
Score = 107 bits (228), Expect = 4e-022
Identities = 55/132 (41%), Positives = 78/132 (59%)
Frame = +1 / -1
Query: 226 HFHCVRTMVSSELKLSLVIDTAVHTGQPLLFESKVPPASLVDCPISIDQMGVLSKHKHLP 405
+FHCV M++S+L+ S +++ +VH QPL F+ + P S V+ I I QM V S HK LP
Sbjct: 28677 NFHCVTPMITSKLQSSSILNLSVHKTQPLAFDLQKPLPSFVNLTICIHQM*VFSAHKQLP 28498
Query: 406 ESPEDDSPHSRMCKCFPEEHL*IISSYVLVLCCDIQLSNPDRETQYGELVQGITYDFSYR 585
ESP+ S + RM K FP HL*II SY+ V I+ PDR ++ LV T D +
Sbjct: 28497 ESPKHHSFNCRMSKGFP*HHL*IIPSYMFVSRGHIKFCEPDR*SECA*LV*SRTNDVTDG 28318
Query: 586 MADMTLHTDPTN 621
M+L+ D ++
Sbjct: 28317 AGYMSLNPDSSH 28282
>ref|NM_100879.2| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds
AT1G10050 mRNA, complete cds
Length = 3230
Score = 258 bits (557), Expect = 2e-067
Identities = 99/151 (65%), Positives = 124/151 (82%)
Frame = -2 / +1
Query: 633 RGAPVGGIGVQGHISHPVGEIICDSLDKLAILGLPIWITELDVTAENEHIRADDLEVFLR 454
+GAPVGGIG+QGHI+ PVG I+ +LDKL+ LGLPIW TELDV++ NEHIR DDLEV L
Sbjct: 2704 KGAPVGGIGIQGHITSPVGHIVRSALDKLSTLGLPIWFTELDVSSTNEHIRGDDLEVMLW 2883
Query: 453 EAFAHPAVGGIILWGFWEMFMFREHAHLVDADGTINEAGRRYLALKQEWLTRMNGSVDHQ 274
EAFAHPAV G++LWGFWE+FM REH+HLV+ADG +NEAG+R+L +K+EWL+ ++G ++
Sbjct: 2884 EAFAHPAVEGVMLWGFWELFMSREHSHLVNADGEVNEAGKRFLEIKREWLSFVDGEIEDG 3063
Query: 273 GEFKFRGYHGSYTVEVNTPSGKVARSFVVDK 181
G +FRGYHGSYTVEV T K +FVVDK
Sbjct: 3064 GGLEFRGYHGSYTVEVVTSESKYVTNFVVDK 3156
Score = 133 bits (284), Expect = 7e-030
Identities = 72/152 (47%), Positives = 85/152 (55%)
Frame = +2 / -1
Query: 176 LSLSTTNDLATLPEGVFTSTVYEPWYPLNLNSPW*STLPFIRVSHSCLRARYLLPASLIV 355
L LSTT + L V TSTV P PLN N P S P +++HS L +R L PASL
Sbjct: 3161 LPLSTTKFVTYLLSDVTTSTV*LP**PLNSNPPPSSISPSTKLNHSRLISRNLFPASLTS 2982
Query: 356 PSASTRWACSRNINISQNPQRMIPPTAGCXXXXXXXXXXXXXXMCSFSAVTSNSVIQIGR 535
PSA T+ CS IN SQNPQ + P TAG +CS TS+SV QIG
Sbjct: 2981 PSAFTKCECSLLINSSQNPQSITPSTAG*AKASHSITSRSSPLICSLVEDTSSSVNQIGN 2802
Query: 536 PSMASLSRESHMISPTGWLI*PCTPIPPTGAP 631
PS+ SLS+ + PTG +I P PIPPTGAP
Sbjct: 2801 PSVLSLSKAERTM*PTGLVICP*IPIPPTGAP 2706
Score = 107 bits (228), Expect = 4e-022
Identities = 55/132 (41%), Positives = 78/132 (59%)
Frame = +1 / -3
Query: 226 HFHCVRTMVSSELKLSLVIDTAVHTGQPLLFESKVPPASLVDCPISIDQMGVLSKHKHLP 405
+FHCV M++S+L+ S +++ +VH QPL F+ + P S V+ I I QM V S HK LP
Sbjct: 3111 NFHCVTPMITSKLQSSSILNLSVHKTQPLAFDLQKPLPSFVNLTICIHQM*VFSAHKQLP 2932
Query: 406 ESPEDDSPHSRMCKCFPEEHL*IISSYVLVLCCDIQLSNPDRETQYGELVQGITYDFSYR 585
ESP+ S + RM K FP HL*II SY+ V I+ PDR ++ LV T D +
Sbjct: 2931 ESPKHHSFNCRMSKGFP*HHL*IIPSYMFVSRGHIKFCEPDR*SECA*LV*SRTNDVTDG 2752
Query: 586 MADMTLHTDPTN 621
M+L+ D ++
Sbjct: 2751 AGYMSLNPDSSH 2716
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 258 bits (557), Expect = 2e-067
Identities = 99/151 (65%), Positives = 124/151 (82%)
Frame = -2 / +1
Query: 633 RGAPVGGIGVQGHISHPVGEIICDSLDKLAILGLPIWITELDVTAENEHIRADDLEVFLR 454
+GAPVGGIG+QGHI+ PVG I+ +LDKL+ LGLPIW TELDV++ NEHIR DDLEV L
Sbjct: 3282958 KGAPVGGIGIQGHITSPVGHIVRSALDKLSTLGLPIWFTELDVSSTNEHIRGDDLEVMLW 3283137
Query: 453 EAFAHPAVGGIILWGFWEMFMFREHAHLVDADGTINEAGRRYLALKQEWLTRMNGSVDHQ 274
EAFAHPAV G++LWGFWE+FM REH+HLV+ADG +NEAG+R+L +K+EWL+ ++G ++
Sbjct: 3283138 EAFAHPAVEGVMLWGFWELFMSREHSHLVNADGEVNEAGKRFLEIKREWLSFVDGEIEDG 3283317
Query: 273 GEFKFRGYHGSYTVEVNTPSGKVARSFVVDK 181
G +FRGYHGSYTVEV T K +FVVDK
Sbjct: 3283318 GGLEFRGYHGSYTVEVVTSESKYVTNFVVDK 3283410
Score = 247 bits (533), Expect = 3e-064
Identities = 93/141 (65%), Positives = 117/141 (82%)
Frame = -2 / +3
Query: 636 DRGAPVGGIGVQGHISHPVGEIICDSLDKLAILGLPIWITELDVTAENEHIRADDLEVFL 457
++GAPVGGIG+QGHI PVG I+C +LDKL ILGLPIW TELDV++ NEHIRADDLEV +
Sbjct: 21691371 EKGAPVGGIGIQGHIDSPVGPIVCSALDKLGILGLPIWFTELDVSSVNEHIRADDLEVMM 21691550
Query: 456 REAFAHPAVGGIILWGFWEMFMFREHAHLVDADGTINEAGRRYLALKQEWLTRMNGSVDH 277
EAF HPAV GI+LWGFWE+FM R+++HLV+A+G +NEAG+R+LA+K++WL+ NG +D
Sbjct: 21691551 WEAFGHPAVEGIMLWGFWELFMSRDNSHLVNAEGDVNEAGKRFLAVKKDWLSHANGHIDQ 21691730
Query: 276 QGEFKFRGYHGSYTVEVNTPS 214
G F FRGY G+Y VEV T S
Sbjct: 21691731 NGAFPFRGYSGNYAVEVITTS 21691793
Score = 144 bits (309), Expect = 2e-033
Identities = 73/143 (51%), Positives = 81/143 (56%)
Frame = +2 / -2
Query: 209 LPEGVFTSTVYEPWYPLNLNSPW*STLPFIRVSHSCLRARYLLPASLIVPSASTRWACSR 388
L E V TST P YPLN N+P+*S P S S A+ LLPASL PSA T+ S
Sbjct: 21691798 LDEVVITSTA*FPLYPLNGNAPF*SICPLA*ESQSFFTAKNLLPASLTSPSAFTK*ELSL 21691619
Query: 389 NINISQNPQRMIPPTAGCXXXXXXXXXXXXXXMCSFSAVTSNSVIQIGRPSMASLSRESH 568
IN SQNP +IP TAGC MCS + TSNSV IG+P + SLSR H
Sbjct: 21691618 LINNSQNPHNIIPSTAGCPKASHIITSKSSALMCSLTEETSNSVNHIGKPRIPSLSRAEH 21691439
Query: 569 MISPTGWLI*PCTPIPPTGAPLS 637
I PTG I P PIPPTGAP S
Sbjct: 21691438 TIGPTGLSIWP*IPIPPTGAPFS 21691370
Score = 133 bits (284), Expect = 7e-030
Identities = 72/152 (47%), Positives = 85/152 (55%)
Frame = +2 / -1
Query: 176 LSLSTTNDLATLPEGVFTSTVYEPWYPLNLNSPW*STLPFIRVSHSCLRARYLLPASLIV 355
L LSTT + L V TSTV P PLN N P S P +++HS L +R L PASL
Sbjct: 3283415 LPLSTTKFVTYLLSDVTTSTV*LP**PLNSNPPPSSISPSTKLNHSRLISRNLFPASLTS 3283236
Query: 356 PSASTRWACSRNINISQNPQRMIPPTAGCXXXXXXXXXXXXXXMCSFSAVTSNSVIQIGR 535
PSA T+ CS IN SQNPQ + P TAG +CS TS+SV QIG
Sbjct: 3283235 PSAFTKCECSLLINSSQNPQSITPSTAG*AKASHSITSRSSPLICSLVEDTSSSVNQIGN 3283056
Query: 536 PSMASLSRESHMISPTGWLI*PCTPIPPTGAP 631
PS+ SLS+ + PTG +I P PIPPTGAP
Sbjct: 3283055 PSVLSLSKAERTM*PTGLVICP*IPIPPTGAP 3282960
Score = 107 bits (228), Expect = 4e-022
Identities = 55/132 (41%), Positives = 78/132 (59%)
Frame = +1 / -3
Query: 226 HFHCVRTMVSSELKLSLVIDTAVHTGQPLLFESKVPPASLVDCPISIDQMGVLSKHKHLP 405
+FHCV M++S+L+ S +++ +VH QPL F+ + P S V+ I I QM V S HK LP
Sbjct: 3283365 NFHCVTPMITSKLQSSSILNLSVHKTQPLAFDLQKPLPSFVNLTICIHQM*VFSAHKQLP 3283186
Query: 406 ESPEDDSPHSRMCKCFPEEHL*IISSYVLVLCCDIQLSNPDRETQYGELVQGITYDFSYR 585
ESP+ S + RM K FP HL*II SY+ V I+ PDR ++ LV T D +
Sbjct: 3283185 ESPKHHSFNCRMSKGFP*HHL*IIPSYMFVSRGHIKFCEPDR*SECA*LV*SRTNDVTDG 3283006
Query: 586 MADMTLHTDPTN 621
M+L+ D ++
Sbjct: 3283005 AGYMSLNPDSSH 3282970
>gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom arm complete sequence
Length = 14668883
Score = 247 bits (533), Expect(2) = 2e-066
Identities = 93/141 (65%), Positives = 117/141 (82%)
Frame = -2 / +2
Query: 636 DRGAPVGGIGVQGHISHPVGEIICDSLDKLAILGLPIWITELDVTAENEHIRADDLEVFL 457
++GAPVGGIG+QGHI PVG I+C +LDKL ILGLPIW TELDV++ NEHIRADDLEV +
Sbjct: 6047147 EKGAPVGGIGIQGHIDSPVGPIVCSALDKLGILGLPIWFTELDVSSVNEHIRADDLEVMM 6047326
Query: 456 REAFAHPAVGGIILWGFWEMFMFREHAHLVDADGTINEAGRRYLALKQEWLTRMNGSVDH 277
EAF HPAV GI+LWGFWE+FM R+++HLV+A+G +NEAG+R+LA+K++WL+ NG +D
Sbjct: 6047327 WEAFGHPAVEGIMLWGFWELFMSRDNSHLVNAEGDVNEAGKRFLAVKKDWLSHANGHIDQ 6047506
Query: 276 QGEFKFRGYHGSYTVEVNTPS 214
G F FRGY G+Y VEV T S
Sbjct: 6047507 NGAFPFRGYSGNYAVEVITTS 6047569
Score = 144 bits (309), Expect = 2e-033
Identities = 73/143 (51%), Positives = 81/143 (56%)
Frame = +2 / -3
Query: 209 LPEGVFTSTVYEPWYPLNLNSPW*STLPFIRVSHSCLRARYLLPASLIVPSASTRWACSR 388
L E V TST P YPLN N+P+*S P S S A+ LLPASL PSA T+ S
Sbjct: 6047574 LDEVVITSTA*FPLYPLNGNAPF*SICPLA*ESQSFFTAKNLLPASLTSPSAFTK*ELSL 6047395
Query: 389 NINISQNPQRMIPPTAGCXXXXXXXXXXXXXXMCSFSAVTSNSVIQIGRPSMASLSRESH 568
IN SQNP +IP TAGC MCS + TSNSV IG+P + SLSR H
Sbjct: 6047394 LINNSQNPHNIIPSTAGCPKASHIITSKSSALMCSLTEETSNSVNHIGKPRIPSLSRAEH 6047215
Query: 569 MISPTGWLI*PCTPIPPTGAPLS 637
I PTG I P PIPPTGAP S
Sbjct: 6047214 TIGPTGLSIWP*IPIPPTGAPFS 6047146
Score = 28.1 bits (55), Expect(2) = 2e-066
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -2 / +2
Query: 228 VNTPSGKVARSFVVDKDSPVQVIALNV 148
+ T S KV ++F VDK+ QVI +++
Sbjct: 6047558 ITTSSSKVLKTFGVDKEDSSQVITVDL 6047638
>gb|AC008051.3|F19C14 Sequence of BAC F19C14 from Arabidopsis thaliana chromosome 1,
complete sequence
Length = 86014
Score = 247 bits (533), Expect(2) = 2e-066
Identities = 93/141 (65%), Positives = 117/141 (82%)
Frame = -2 / -3
Query: 636 DRGAPVGGIGVQGHISHPVGEIICDSLDKLAILGLPIWITELDVTAENEHIRADDLEVFL 457
++GAPVGGIG+QGHI PVG I+C +LDKL ILGLPIW TELDV++ NEHIRADDLEV +
Sbjct: 2168 EKGAPVGGIGIQGHIDSPVGPIVCSALDKLGILGLPIWFTELDVSSVNEHIRADDLEVMM 1989
Query: 456 REAFAHPAVGGIILWGFWEMFMFREHAHLVDADGTINEAGRRYLALKQEWLTRMNGSVDH 277
EAF HPAV GI+LWGFWE+FM R+++HLV+A+G +NEAG+R+LA+K++WL+ NG +D
Sbjct: 1988 WEAFGHPAVEGIMLWGFWELFMSRDNSHLVNAEGDVNEAGKRFLAVKKDWLSHANGHIDQ 1809
Query: 276 QGEFKFRGYHGSYTVEVNTPS 214
G F FRGY G+Y VEV T S
Sbjct: 1808 NGAFPFRGYSGNYAVEVITTS 1746
Score = 144 bits (309), Expect = 2e-033
Identities = 73/143 (51%), Positives = 81/143 (56%)
Frame = +2 / +1
Query: 209 LPEGVFTSTVYEPWYPLNLNSPW*STLPFIRVSHSCLRARYLLPASLIVPSASTRWACSR 388
L E V TST P YPLN N+P+*S P S S A+ LLPASL PSA T+ S
Sbjct: 1741 LDEVVITSTA*FPLYPLNGNAPF*SICPLA*ESQSFFTAKNLLPASLTSPSAFTK*ELSL 1920
Query: 389 NINISQNPQRMIPPTAGCXXXXXXXXXXXXXXMCSFSAVTSNSVIQIGRPSMASLSRESH 568
IN SQNP +IP TAGC MCS + TSNSV IG+P + SLSR H
Sbjct: 1921 LINNSQNPHNIIPSTAGCPKASHIITSKSSALMCSLTEETSNSVNHIGKPRIPSLSRAEH 2100
Query: 569 MISPTGWLI*PCTPIPPTGAPLS 637
I PTG I P PIPPTGAP S
Sbjct: 2101 TIGPTGLSIWP*IPIPPTGAPFS 2169
Score = 28.1 bits (55), Expect(2) = 2e-066
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -2 / -3
Query: 228 VNTPSGKVARSFVVDKDSPVQVIALNV 148
+ T S KV ++F VDK+ QVI +++
Sbjct: 1757 ITTSSSKVLKTFGVDKEDSSQVITVDL 1677
>dbj|AB077822.1| Arabidopsis thaliana genomic DNA, chromosome 1, P1 clone:X7J, complete
sequence
Length = 77636
Score = 247 bits (533), Expect(2) = 2e-066
Identities = 93/141 (65%), Positives = 117/141 (82%)
Frame = -2 / +2
Query: 636 DRGAPVGGIGVQGHISHPVGEIICDSLDKLAILGLPIWITELDVTAENEHIRADDLEVFL 457
++GAPVGGIG+QGHI PVG I+C +LDKL ILGLPIW TELDV++ NEHIRADDLEV +
Sbjct: 16262 EKGAPVGGIGIQGHIDSPVGPIVCSALDKLGILGLPIWFTELDVSSVNEHIRADDLEVMM 16441
Query: 456 REAFAHPAVGGIILWGFWEMFMFREHAHLVDADGTINEAGRRYLALKQEWLTRMNGSVDH 277
EAF HPAV GI+LWGFWE+FM R+++HLV+A+G +NEAG+R+LA+K++WL+ NG +D
Sbjct: 16442 WEAFGHPAVEGIMLWGFWELFMSRDNSHLVNAEGDVNEAGKRFLAVKKDWLSHANGHIDQ 16621
Query: 276 QGEFKFRGYHGSYTVEVNTPS 214
G F FRGY G+Y VEV T S
Sbjct: 16622 NGAFPFRGYSGNYAVEVITTS 16684
Score = 144 bits (309), Expect = 2e-033
Identities = 73/143 (51%), Positives = 81/143 (56%)
Frame = +2 / -3
Query: 209 LPEGVFTSTVYEPWYPLNLNSPW*STLPFIRVSHSCLRARYLLPASLIVPSASTRWACSR 388
L E V TST P YPLN N+P+*S P S S A+ LLPASL PSA T+ S
Sbjct: 16689 LDEVVITSTA*FPLYPLNGNAPF*SICPLA*ESQSFFTAKNLLPASLTSPSAFTK*ELSL 16510
Query: 389 NINISQNPQRMIPPTAGCXXXXXXXXXXXXXXMCSFSAVTSNSVIQIGRPSMASLSRESH 568
IN SQNP +IP TAGC MCS + TSNSV IG+P + SLSR H
Sbjct: 16509 LINNSQNPHNIIPSTAGCPKASHIITSKSSALMCSLTEETSNSVNHIGKPRIPSLSRAEH 16330
Query: 569 MISPTGWLI*PCTPIPPTGAPLS 637
I PTG I P PIPPTGAP S
Sbjct: 16329 TIGPTGLSIWP*IPIPPTGAPFS 16261
Score = 28.1 bits (55), Expect(2) = 2e-066
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -2 / +2
Query: 228 VNTPSGKVARSFVVDKDSPVQVIALNV 148
+ T S KV ++F VDK+ QVI +++
Sbjct: 16673 ITTSSSKVLKTFGVDKEDSSQVITVDL 16753
>gb|AC082643.6|AC082643 Arabidopsis thaliana chromosome 1 BAC F9K23 genomic sequence, complete
sequence
Length = 48891
Score = 247 bits (533), Expect(2) = 2e-066
Identities = 93/141 (65%), Positives = 117/141 (82%)
Frame = -2 / -2
Query: 636 DRGAPVGGIGVQGHISHPVGEIICDSLDKLAILGLPIWITELDVTAENEHIRADDLEVFL 457
++GAPVGGIG+QGHI PVG I+C +LDKL ILGLPIW TELDV++ NEHIRADDLEV +
Sbjct: 45062 EKGAPVGGIGIQGHIDSPVGPIVCSALDKLGILGLPIWFTELDVSSVNEHIRADDLEVMM 44883
Query: 456 REAFAHPAVGGIILWGFWEMFMFREHAHLVDADGTINEAGRRYLALKQEWLTRMNGSVDH 277
EAF HPAV GI+LWGFWE+FM R+++HLV+A+G +NEAG+R+LA+K++WL+ NG +D
Sbjct: 44882 WEAFGHPAVEGIMLWGFWELFMSRDNSHLVNAEGDVNEAGKRFLAVKKDWLSHANGHIDQ 44703
Query: 276 QGEFKFRGYHGSYTVEVNTPS 214
G F FRGY G+Y VEV T S
Sbjct: 44702 NGAFPFRGYSGNYAVEVITTS 44640
Score = 144 bits (309), Expect = 2e-033
Identities = 73/143 (51%), Positives = 81/143 (56%)
Frame = +2 / +1
Query: 209 LPEGVFTSTVYEPWYPLNLNSPW*STLPFIRVSHSCLRARYLLPASLIVPSASTRWACSR 388
L E V TST P YPLN N+P+*S P S S A+ LLPASL PSA T+ S
Sbjct: 44635 LDEVVITSTA*FPLYPLNGNAPF*SICPLA*ESQSFFTAKNLLPASLTSPSAFTK*ELSL 44814
Query: 389 NINISQNPQRMIPPTAGCXXXXXXXXXXXXXXMCSFSAVTSNSVIQIGRPSMASLSRESH 568
IN SQNP +IP TAGC MCS + TSNSV IG+P + SLSR H
Sbjct: 44815 LINNSQNPHNIIPSTAGCPKASHIITSKSSALMCSLTEETSNSVNHIGKPRIPSLSRAEH 44994
Query: 569 MISPTGWLI*PCTPIPPTGAPLS 637
I PTG I P PIPPTGAP S
Sbjct: 44995 TIGPTGLSIWP*IPIPPTGAPFS 45063
Score = 28.1 bits (55), Expect(2) = 2e-066
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -2 / -2
Query: 228 VNTPSGKVARSFVVDKDSPVQVIALNV 148
+ T S KV ++F VDK+ QVI +++
Sbjct: 44651 ITTSSSKVLKTFGVDKEDSSQVITVDL 44571
>dbj|AB008015.1| Arabidopsis thaliana RXF12 mRNA, complete cds
Length = 2903
Score = 247 bits (533), Expect(2) = 2e-066
Identities = 93/141 (65%), Positives = 117/141 (82%)
Frame = -2 / +2
Query: 636 DRGAPVGGIGVQGHISHPVGEIICDSLDKLAILGLPIWITELDVTAENEHIRADDLEVFL 457
++GAPVGGIG+QGHI PVG I+C +LDKL ILGLPIW TELDV++ NEHIRADDLEV +
Sbjct: 2288 EKGAPVGGIGIQGHIDSPVGPIVCSALDKLGILGLPIWFTELDVSSVNEHIRADDLEVMM 2467
Query: 456 REAFAHPAVGGIILWGFWEMFMFREHAHLVDADGTINEAGRRYLALKQEWLTRMNGSVDH 277
EAF HPAV GI+LWGFWE+FM R+++HLV+A+G +NEAG+R+LA+K++WL+ NG +D
Sbjct: 2468 WEAFGHPAVEGIMLWGFWELFMSRDNSHLVNAEGDVNEAGKRFLAVKKDWLSHANGHIDQ 2647
Query: 276 QGEFKFRGYHGSYTVEVNTPS 214
G F FRGY G+Y VEV T S
Sbjct: 2648 NGAFPFRGYSGNYAVEVITTS 2710
Score = 144 bits (309), Expect = 2e-033
Identities = 73/143 (51%), Positives = 81/143 (56%)
Frame = +2 / -3
Query: 209 LPEGVFTSTVYEPWYPLNLNSPW*STLPFIRVSHSCLRARYLLPASLIVPSASTRWACSR 388
L E V TST P YPLN N+P+*S P S S A+ LLPASL PSA T+ S
Sbjct: 2715 LDEVVITSTA*FPLYPLNGNAPF*SICPLA*ESQSFFTAKNLLPASLTSPSAFTK*ELSL 2536
Query: 389 NINISQNPQRMIPPTAGCXXXXXXXXXXXXXXMCSFSAVTSNSVIQIGRPSMASLSRESH 568
IN SQNP +IP TAGC MCS + TSNSV IG+P + SLSR H
Sbjct: 2535 LINNSQNPHNIIPSTAGCPKASHIITSKSSALMCSLTEETSNSVNHIGKPRIPSLSRAEH 2356
Query: 569 MISPTGWLI*PCTPIPPTGAPLS 637
I PTG I P PIPPTGAP S
Sbjct: 2355 TIGPTGLSIWP*IPIPPTGAPFS 2287
Score = 28.1 bits (55), Expect(2) = 2e-066
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -2 / +2
Query: 228 VNTPSGKVARSFVVDKDSPVQVIALNV 148
+ T S KV ++F VDK+ QVI +++
Sbjct: 2699 ITTSSSKVLKTFGVDKEDSSQVITVDL 2779
>ref|NM_104617.2| Arabidopsis thaliana RXF12; hydrolase, hydrolyzing O-glycosyl
compounds AT1G58370 (RXF12) mRNA, complete cds
Length = 2883
Score = 247 bits (533), Expect(2) = 2e-066
Identities = 93/141 (65%), Positives = 117/141 (82%)
Frame = -2 / +3
Query: 636 DRGAPVGGIGVQGHISHPVGEIICDSLDKLAILGLPIWITELDVTAENEHIRADDLEVFL 457
++GAPVGGIG+QGHI PVG I+C +LDKL ILGLPIW TELDV++ NEHIRADDLEV +
Sbjct: 2268 EKGAPVGGIGIQGHIDSPVGPIVCSALDKLGILGLPIWFTELDVSSVNEHIRADDLEVMM 2447
Query: 456 REAFAHPAVGGIILWGFWEMFMFREHAHLVDADGTINEAGRRYLALKQEWLTRMNGSVDH 277
EAF HPAV GI+LWGFWE+FM R+++HLV+A+G +NEAG+R+LA+K++WL+ NG +D
Sbjct: 2448 WEAFGHPAVEGIMLWGFWELFMSRDNSHLVNAEGDVNEAGKRFLAVKKDWLSHANGHIDQ 2627
Query: 276 QGEFKFRGYHGSYTVEVNTPS 214
G F FRGY G+Y VEV T S
Sbjct: 2628 NGAFPFRGYSGNYAVEVITTS 2690
Score = 144 bits (309), Expect = 2e-033
Identities = 73/143 (51%), Positives = 81/143 (56%)
Frame = +2 / -3
Query: 209 LPEGVFTSTVYEPWYPLNLNSPW*STLPFIRVSHSCLRARYLLPASLIVPSASTRWACSR 388
L E V TST P YPLN N+P+*S P S S A+ LLPASL PSA T+ S
Sbjct: 2695 LDEVVITSTA*FPLYPLNGNAPF*SICPLA*ESQSFFTAKNLLPASLTSPSAFTK*ELSL 2516
Query: 389 NINISQNPQRMIPPTAGCXXXXXXXXXXXXXXMCSFSAVTSNSVIQIGRPSMASLSRESH 568
IN SQNP +IP TAGC MCS + TSNSV IG+P + SLSR H
Sbjct: 2515 LINNSQNPHNIIPSTAGCPKASHIITSKSSALMCSLTEETSNSVNHIGKPRIPSLSRAEH 2336
Query: 569 MISPTGWLI*PCTPIPPTGAPLS 637
I PTG I P PIPPTGAP S
Sbjct: 2335 TIGPTGLSIWP*IPIPPTGAPFS 2267
Score = 28.1 bits (55), Expect(2) = 2e-066
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -2 / +3
Query: 228 VNTPSGKVARSFVVDKDSPVQVIALNV 148
+ T S KV ++F VDK+ QVI +++
Sbjct: 2679 ITTSSSKVLKTFGVDKEDSSQVITVDL 2759
>emb|CR360785.1| Arabidopsis thaliana T-DNA flanking sequence GK-823C09-025529,
genomic survey sequence
Length = 518
Score = 245 bits (529), Expect = 1e-063
Identities = 93/139 (66%), Positives = 115/139 (82%)
Frame = -2 / -3
Query: 630 GAPVGGIGVQGHISHPVGEIICDSLDKLAILGLPIWITELDVTAENEHIRADDLEVFLRE 451
GAPVGGIG+QGHI PVG I+C +LDKL ILGLPIW TELDV++ NEHIRADDLEV + E
Sbjct: 516 GAPVGGIGIQGHIDSPVGPIVCSALDKLGILGLPIWFTELDVSSVNEHIRADDLEVMMWE 337
Query: 450 AFAHPAVGGIILWGFWEMFMFREHAHLVDADGTINEAGRRYLALKQEWLTRMNGSVDHQG 271
AF HPAV GI+LWGFWE+FM R+++HLV+A+G +NEAG+R+LA+K++WL+ NG +D G
Sbjct: 336 AFGHPAVEGIMLWGFWELFMSRDNSHLVNAEGDVNEAGKRFLAVKKDWLSHANGHIDQNG 157
Query: 270 EFKFRGYHGSYTVEVNTPS 214
F FRGY G+Y VEV T S
Sbjct: 156 AFPFRGYSGNYAVEVITTS 100
Score = 141 bits (302), Expect = 2e-032
Identities = 71/139 (51%), Positives = 79/139 (56%)
Frame = +2 / +2
Query: 215 EGVFTSTVYEPWYPLNLNSPW*STLPFIRVSHSCLRARYLLPASLIVPSASTRWACSRNI 394
E V TST P YPLN N+P+*S P S S A+ LLPASL PSA T+ S I
Sbjct: 101 EVVITSTA*FPLYPLNGNAPF*SICPLA*ESQSFFTAKNLLPASLTSPSAFTK*ELSLLI 280
Query: 395 NISQNPQRMIPPTAGCXXXXXXXXXXXXXXMCSFSAVTSNSVIQIGRPSMASLSRESHMI 574
N SQNP +IP TAGC MCS + TSNSV IG+P + SLSR H I
Sbjct: 281 NNSQNPHNIIPSTAGCPKASHIITSKSSALMCSLTEETSNSVNHIGKPRIPSLSRAEHTI 460
Query: 575 SPTGWLI*PCTPIPPTGAP 631
PTG I P PIPPTGAP
Sbjct: 461 GPTGLSIWP*IPIPPTGAP 517
>ref|NM_116885.3| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds
AT4G08160 transcript variant AT4G08160.1 mRNA, complete
cds
Length = 2516
Score = 244 bits (527), Expect = 2e-063
Identities = 92/162 (56%), Positives = 128/162 (79%)
Frame = -2 / +3
Query: 633 RGAPVGGIGVQGHISHPVGEIICDSLDKLAILGLPIWITELDVTAENEHIRADDLEVFLR 454
+GA VGGIG+QGHI PVG I+C +LD L++LG PIW TELDV++ NE++R +DLEV L
Sbjct: 1842 QGATVGGIGIQGHIDSPVGAIVCSALDMLSVLGRPIWFTELDVSSSNEYVRGEDLEVMLW 2021
Query: 453 EAFAHPAVGGIILWGFWEMFMFREHAHLVDADGTINEAGRRYLALKQEWLTRMNGSVDHQ 274
EAFAHP+V GI+LWGFWE+ M RE+A+LV+ +G +NEAG+R+L +KQEWL+ G ++ +
Sbjct: 2022 EAFAHPSVEGIMLWGFWELSMSRENANLVEGEGEVNEAGKRFLEVKQEWLSHAYGIINDE 2201
Query: 273 GEFKFRGYHGSYTVEVNTPSGKVARSFVVDKDSPVQVIALNV 148
EF FRGYHG+Y VE+ TP+G V ++FVV+K VI++++
Sbjct: 2202 SEFTFRGYHGTYAVEICTPAGIVLKTFVVEKGDTPLVISIDL 2327
Score = 88.6 bits (187), Expect(2) = 1e-026
Identities = 42/85 (49%), Positives = 52/85 (61%)
Frame = +2 / -2
Query: 185 STTNDLATLPEGVFTSTVYEPWYPLNLNSPW*STLPFIRVSHSCLRARYLLPASLIVPSA 364
STTN L T+P GV ST PW PLN+NS +P+ +HSC ++ L PAS PS
Sbjct: 2290 STTNVLRTIPAGVQISTA*VPW*PLNVNSDSSLMIPYA*DNHSCFTSKNLFPASFTSPSP 2111
Query: 365 STRWACSRNINISQNPQRMIPPTAG 439
STR+A S I+ SQNP +IP T G
Sbjct: 2110 STRFAFSLLIDSSQNPHNIIPSTEG 2036
Score = 53.3 bits (110), Expect(2) = 1e-026
Identities = 24/42 (57%), Positives = 28/42 (66%)
Frame = +2 / -2
Query: 506 TSNSVIQIGRPSMASLSRESHMISPTGWLI*PCTPIPPTGAP 631
TS+SV Q+GRP S+SR I+PTG I P PIPPT AP
Sbjct: 1969 TSSSVNQMGRPRTESISRAEQTIAPTGLSICPWIPIPPTVAP 1844
>emb|CR360784.1| Arabidopsis thaliana T-DNA flanking sequence GK-823C09-025509,
genomic survey sequence
Length = 462
Score = 243 bits (526), Expect = 3e-063
Identities = 93/143 (65%), Positives = 115/143 (80%)
Frame = -2 / -3
Query: 627 APVGGIGVQGHISHPVGEIICDSLDKLAILGLPIWITELDVTAENEHIRADDLEVFLREA 448
APVGGIG+QGHI PVG I+C +LDKL ILGLPIW TELDV++ NEHIRADDLEV + EA
Sbjct: 460 APVGGIGIQGHIDSPVGPIVCSALDKLGILGLPIWFTELDVSSVNEHIRADDLEVMMWEA 281
Query: 447 FAHPAVGGIILWGFWEMFMFREHAHLVDADGTINEAGRRYLALKQEWLTRMNGSVDHQGE 268
F HPAV GI+LWGFWE+FM R+++HLV+A+G +NEAG+R+LA+K++WL+ NG +D G
Sbjct: 280 FGHPAVEGIMLWGFWELFMSRDNSHLVNAEGDVNEAGKRFLAVKKDWLSHANGHIDQNGA 101
Query: 267 FKFRGYHGSYTVEVNTPSGKVAR 199
F FRGY G+Y VEV T S R
Sbjct: 100 FPFRGYSGNYAVEVITTSSSKVR 32
Score = 139 bits (298), Expect = 8e-032
Identities = 71/140 (50%), Positives = 79/140 (56%)
Frame = +2 / +3
Query: 209 LPEGVFTSTVYEPWYPLNLNSPW*STLPFIRVSHSCLRARYLLPASLIVPSASTRWACSR 388
L E V TST P YPLN N+P+*S P S S A+ LLPASL PSA T+ S
Sbjct: 42 LDEVVITSTA*FPLYPLNGNAPF*SICPLA*ESQSFFTAKNLLPASLTSPSAFTK*ELSL 221
Query: 389 NINISQNPQRMIPPTAGCXXXXXXXXXXXXXXMCSFSAVTSNSVIQIGRPSMASLSRESH 568
IN SQNP +IP TAGC MCS + TSNSV IG+P + SLSR H
Sbjct: 222 LINNSQNPHNIIPSTAGCPKASHIITSKSSALMCSLTEETSNSVNHIGKPRIPSLSRAEH 401
Query: 569 MISPTGWLI*PCTPIPPTGA 628
I PTG I P PIPPTGA
Sbjct: 402 TIGPTGLSIWP*IPIPPTGA 461
>gb|BT005962.1| Arabidopsis thaliana At4g08160 gene, complete cds
Length = 2259
Score = 243 bits (524), Expect = 5e-063
Identities = 92/162 (56%), Positives = 127/162 (78%)
Frame = -2 / +1
Query: 633 RGAPVGGIGVQGHISHPVGEIICDSLDKLAILGLPIWITELDVTAENEHIRADDLEVFLR 454
+GA VGGIG+QGHI PVG I+C +LD L++LG PIW TELDV++ NE++R +DLEV L
Sbjct: 1762 QGATVGGIGIQGHIDSPVGAIVCSALDMLSVLGRPIWFTELDVSSSNEYVRGEDLEVMLW 1941
Query: 453 EAFAHPAVGGIILWGFWEMFMFREHAHLVDADGTINEAGRRYLALKQEWLTRMNGSVDHQ 274
EAFAHP+V GI+LWGFWE+ M RE+A+LV+ +G +NEAG+R+L +KQEWL+ G ++ +
Sbjct: 1942 EAFAHPSVEGIMLWGFWELSMSRENANLVEGEGEVNEAGKRFLEVKQEWLSHAYGIINDE 2121
Query: 273 GEFKFRGYHGSYTVEVNTPSGKVARSFVVDKDSPVQVIALNV 148
EF FRGYHG+Y VE+ TP G V ++FVV+K VI++++
Sbjct: 2122 SEFTFRGYHGTYAVEICTPVGIVLKTFVVEKGDTPLVISIDL 2247
Score = 88.6 bits (187), Expect(2) = 1e-026
Identities = 42/85 (49%), Positives = 52/85 (61%)
Frame = +2 / -2
Query: 185 STTNDLATLPEGVFTSTVYEPWYPLNLNSPW*STLPFIRVSHSCLRARYLLPASLIVPSA 364
STTN L T+P GV ST PW PLN+NS +P+ +HSC ++ L PAS PS
Sbjct: 2210 STTNVLRTIPTGVQISTA*VPW*PLNVNSDSSLMIPYA*DNHSCFTSKNLFPASFTSPSP 2031
Query: 365 STRWACSRNINISQNPQRMIPPTAG 439
STR+A S I+ SQNP +IP T G
Sbjct: 2030 STRFAFSLLIDSSQNPHNIIPSTEG 1956
Score = 53.3 bits (110), Expect(2) = 1e-026
Identities = 24/42 (57%), Positives = 28/42 (66%)
Frame = +2 / -2
Query: 506 TSNSVIQIGRPSMASLSRESHMISPTGWLI*PCTPIPPTGAP 631
TS+SV Q+GRP S+SR I+PTG I P PIPPT AP
Sbjct: 1889 TSSSVNQMGRPRTESISRAEQTIAPTGLSICPWIPIPPTVAP 1764
>dbj|AK117349.1| Arabidopsis thaliana At4g08160 mRNA for putative xylan endohydrolase,
complete cds, clone: RAFL16-91-G20
Length = 2516
Score = 243 bits (524), Expect = 5e-063
Identities = 92/162 (56%), Positives = 127/162 (78%)
Frame = -2 / +3
Query: 633 RGAPVGGIGVQGHISHPVGEIICDSLDKLAILGLPIWITELDVTAENEHIRADDLEVFLR 454
+GA VGGIG+QGHI PVG I+C +LD L++LG PIW TELDV++ NE++R +DLEV L
Sbjct: 1842 QGATVGGIGIQGHIDSPVGAIVCSALDMLSVLGRPIWFTELDVSSSNEYVRGEDLEVMLW 2021
Query: 453 EAFAHPAVGGIILWGFWEMFMFREHAHLVDADGTINEAGRRYLALKQEWLTRMNGSVDHQ 274
EAFAHP+V GI+LWGFWE+ M RE+A+LV+ +G +NEAG+R+L +KQEWL+ G ++ +
Sbjct: 2022 EAFAHPSVEGIMLWGFWELSMSRENANLVEGEGEVNEAGKRFLEVKQEWLSHAYGIINDE 2201
Query: 273 GEFKFRGYHGSYTVEVNTPSGKVARSFVVDKDSPVQVIALNV 148
EF FRGYHG+Y VE+ TP G V ++FVV+K VI++++
Sbjct: 2202 SEFTFRGYHGTYAVEICTPVGIVLKTFVVEKGDTPLVISIDL 2327
Score = 88.6 bits (187), Expect(2) = 1e-026
Identities = 42/85 (49%), Positives = 52/85 (61%)
Frame = +2 / -2
Query: 185 STTNDLATLPEGVFTSTVYEPWYPLNLNSPW*STLPFIRVSHSCLRARYLLPASLIVPSA 364
STTN L T+P GV ST PW PLN+NS +P+ +HSC ++ L PAS PS
Sbjct: 2290 STTNVLRTIPTGVQISTA*VPW*PLNVNSDSSLMIPYA*DNHSCFTSKNLFPASFTSPSP 2111
Query: 365 STRWACSRNINISQNPQRMIPPTAG 439
STR+A S I+ SQNP +IP T G
Sbjct: 2110 STRFAFSLLIDSSQNPHNIIPSTEG 2036
Score = 53.3 bits (110), Expect(2) = 1e-026
Identities = 24/42 (57%), Positives = 28/42 (66%)
Frame = +2 / -2
Query: 506 TSNSVIQIGRPSMASLSRESHMISPTGWLI*PCTPIPPTGAP 631
TS+SV Q+GRP S+SR I+PTG I P PIPPT AP
Sbjct: 1969 TSSSVNQMGRPRTESISRAEQTIAPTGLSICPWIPIPPTVAP 1844
>ref|NM_001036516.1| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds
AT4G08160 transcript variant AT4G08160.2 mRNA, complete
cds
Length = 2527
Score = 131 bits (280), Expect(2) = 6e-059
Identities = 48/93 (51%), Positives = 72/93 (77%)
Frame = -2 / +2
Query: 426 GIILWGFWEMFMFREHAHLVDADGTINEAGRRYLALKQEWLTRMNGSVDHQGEFKFRGYH 247
GI+LWGFWE+ M RE+A+LV+ +G +NEAG+R+L +KQEWL+ G ++ + EF FRGYH
Sbjct: 2060 GIMLWGFWELSMSRENANLVEGEGEVNEAGKRFLEVKQEWLSHAYGIINDESEFTFRGYH 2239
Query: 246 GSYTVEVNTPSGKVARSFVVDKDSPVQVIALNV 148
G+Y VE+ TP+G V ++FVV+K VI++++
Sbjct: 2240 GTYAVEICTPAGIVLKTFVVEKGDTPLVISIDL 2338
Score = 118 bits (253), Expect(2) = 6e-059
Identities = 45/70 (64%), Positives = 57/70 (81%)
Frame = -2 / +3
Query: 633 RGAPVGGIGVQGHISHPVGEIICDSLDKLAILGLPIWITELDVTAENEHIRADDLEVFLR 454
+GA VGGIG+QGHI PVG I+C +LD L++LG PIW TELDV++ NE++R +DLEV L
Sbjct: 1842 QGATVGGIGIQGHIDSPVGAIVCSALDMLSVLGRPIWFTELDVSSSNEYVRGEDLEVMLW 2021
Query: 453 EAFAHPAVGG 424
EAFAHP+V G
Sbjct: 2022 EAFAHPSVEG 2051
Score = 84.5 bits (178), Expect(2) = 2e-025
Identities = 40/81 (49%), Positives = 50/81 (61%)
Frame = +2 / -2
Query: 185 STTNDLATLPEGVFTSTVYEPWYPLNLNSPW*STLPFIRVSHSCLRARYLLPASLIVPSA 364
STTN L T+P GV ST PW PLN+NS +P+ +HSC ++ L PAS PS
Sbjct: 2301 STTNVLRTIPAGVQISTA*VPW*PLNVNSDSSLMIPYA*DNHSCFTSKNLFPASFTSPSP 2122
Query: 365 STRWACSRNINISQNPQRMIP 427
STR+A S I+ SQNP +IP
Sbjct: 2121 STRFAFSLLIDSSQNPHNIIP 2059
Score = 53.3 bits (110), Expect(2) = 2e-025
Identities = 24/42 (57%), Positives = 28/42 (66%)
Frame = +2 / -1
Query: 506 TSNSVIQIGRPSMASLSRESHMISPTGWLI*PCTPIPPTGAP 631
TS+SV Q+GRP S+SR I+PTG I P PIPPT AP
Sbjct: 1969 TSSSVNQMGRPRTESISRAEQTIAPTGLSICPWIPIPPTVAP 1844
>gb|AC006267.1| Arabidopsis thaliana BAC F9M13 from chromosome IV near 21.5 cM,
complete sequence
Length = 101644
Score = 131 bits (280), Expect(2) = 7e-057
Identities = 48/93 (51%), Positives = 72/93 (77%)
Frame = -2 / +2
Query: 426 GIILWGFWEMFMFREHAHLVDADGTINEAGRRYLALKQEWLTRMNGSVDHQGEFKFRGYH 247
GI+LWGFWE+ M RE+A+LV+ +G +NEAG+R+L +KQEWL+ G ++ + EF FRGYH
Sbjct: 2603 GIMLWGFWELSMSRENANLVEGEGEVNEAGKRFLEVKQEWLSHAYGIINDESEFTFRGYH 2782
Query: 246 GSYTVEVNTPSGKVARSFVVDKDSPVQVIALNV 148
G+Y VE+ TP+G V ++FVV+K VI++++
Sbjct: 2783 GTYAVEICTPAGIVLKTFVVEKGDTPLVISIDL 2881
Score = 121 bits (258), Expect(2) = 7e-057
Identities = 47/76 (61%), Positives = 60/76 (78%)
Frame = -2 / +1
Query: 633 RGAPVGGIGVQGHISHPVGEIICDSLDKLAILGLPIWITELDVTAENEHIRADDLEVFLR 454
+GA VGGIG+QGHI PVG I+C +LD L++LG PIW TELDV++ NE++R +DLEV L
Sbjct: 1516 QGATVGGIGIQGHIDSPVGAIVCSALDMLSVLGRPIWFTELDVSSSNEYVRGEDLEVMLW 1695
Query: 453 EAFAHPAVGGIILWGF 406
EAFAHP+V G I + F
Sbjct: 1696 EAFAHPSVEGTIYFIF 1743
Score = 84.5 bits (178), Expect(2) = 9e-023
Identities = 40/81 (49%), Positives = 50/81 (61%)
Frame = +2 / -2
Query: 185 STTNDLATLPEGVFTSTVYEPWYPLNLNSPW*STLPFIRVSHSCLRARYLLPASLIVPSA 364
STTN L T+P GV ST PW PLN+NS +P+ +HSC ++ L PAS PS
Sbjct: 2844 STTNVLRTIPAGVQISTA*VPW*PLNVNSDSSLMIPYA*DNHSCFTSKNLFPASFTSPSP 2665
Query: 365 STRWACSRNINISQNPQRMIP 427
STR+A S I+ SQNP +IP
Sbjct: 2664 STRFAFSLLIDSSQNPHNIIP 2602
Score = 53.3 bits (110), Expect(2) = 9e-023
Identities = 24/42 (57%), Positives = 28/42 (66%)
Frame = +2 / -3
Query: 506 TSNSVIQIGRPSMASLSRESHMISPTGWLI*PCTPIPPTGAP 631
TS+SV Q+GRP S+SR I+PTG I P PIPPT AP
Sbjct: 1643 TSSSVNQMGRPRTESISRAEQTIAPTGLSICPWIPIPPTVAP 1518
>emb|AL161510.2|ATCHRIV22 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 22
Length = 198131
Score = 131 bits (280), Expect(2) = 1e-056
Identities = 48/93 (51%), Positives = 72/93 (77%)
Frame = -2 / -2
Query: 426 GIILWGFWEMFMFREHAHLVDADGTINEAGRRYLALKQEWLTRMNGSVDHQGEFKFRGYH 247
GI+LWGFWE+ M RE+A+LV+ +G +NEAG+R+L +KQEWL+ G ++ + EF FRGYH
Sbjct: 126436 GIMLWGFWELSMSRENANLVEGEGEVNEAGKRFLEVKQEWLSHAYGIINDESEFTFRGYH 126257
Query: 246 GSYTVEVNTPSGKVARSFVVDKDSPVQVIALNV 148
G+Y VE+ TP+G V ++FVV+K VI++++
Sbjct: 126256 GTYAVEICTPAGIVLKTFVVEKGDTPLVISIDL 126158
Score = 121 bits (258), Expect(2) = 1e-056
Identities = 47/76 (61%), Positives = 60/76 (78%)
Frame = -2 / -1
Query: 633 RGAPVGGIGVQGHISHPVGEIICDSLDKLAILGLPIWITELDVTAENEHIRADDLEVFLR 454
+GA VGGIG+QGHI PVG I+C +LD L++LG PIW TELDV++ NE++R +DLEV L
Sbjct: 127523 QGATVGGIGIQGHIDSPVGAIVCSALDMLSVLGRPIWFTELDVSSSNEYVRGEDLEVMLW 127344
Query: 453 EAFAHPAVGGIILWGF 406
EAFAHP+V G I + F
Sbjct: 127343 EAFAHPSVEGTIYFIF 127296
Score = 84.5 bits (178), Expect(2) = 2e-022
Identities = 40/81 (49%), Positives = 50/81 (61%)
Frame = +2 / +3
Query: 185 STTNDLATLPEGVFTSTVYEPWYPLNLNSPW*STLPFIRVSHSCLRARYLLPASLIVPSA 364
STTN L T+P GV ST PW PLN+NS +P+ +HSC ++ L PAS PS
Sbjct: 126195 STTNVLRTIPAGVQISTA*VPW*PLNVNSDSSLMIPYA*DNHSCFTSKNLFPASFTSPSP 126374
Query: 365 STRWACSRNINISQNPQRMIP 427
STR+A S I+ SQNP +IP
Sbjct: 126375 STRFAFSLLIDSSQNPHNIIP 126437
Score = 53.3 bits (110), Expect(2) = 2e-022
Identities = 24/42 (57%), Positives = 28/42 (66%)
Frame = +2 / +1
Query: 506 TSNSVIQIGRPSMASLSRESHMISPTGWLI*PCTPIPPTGAP 631
TS+SV Q+GRP S+SR I+PTG I P PIPPT AP
Sbjct: 127396 TSSSVNQMGRPRTESISRAEQTIAPTGLSICPWIPIPPTVAP 127521
>emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long arm
Length = 14497843
Score = 131 bits (280), Expect(2) = 9e-055
Identities = 48/93 (51%), Positives = 72/93 (77%)
Frame = -2 / -3
Query: 426 GIILWGFWEMFMFREHAHLVDADGTINEAGRRYLALKQEWLTRMNGSVDHQGEFKFRGYH 247
GI+LWGFWE+ M RE+A+LV+ +G +NEAG+R+L +KQEWL+ G ++ + EF FRGYH
Sbjct: 1072211 GIMLWGFWELSMSRENANLVEGEGEVNEAGKRFLEVKQEWLSHAYGIINDESEFTFRGYH 1072032
Query: 246 GSYTVEVNTPSGKVARSFVVDKDSPVQVIALNV 148
G+Y VE+ TP+G V ++FVV+K VI++++
Sbjct: 1072031 GTYAVEICTPAGIVLKTFVVEKGDTPLVISIDL 1071933
Score = 121 bits (258), Expect(2) = 9e-055
Identities = 47/76 (61%), Positives = 60/76 (78%)
Frame = -2 / -2
Query: 633 RGAPVGGIGVQGHISHPVGEIICDSLDKLAILGLPIWITELDVTAENEHIRADDLEVFLR 454
+GA VGGIG+QGHI PVG I+C +LD L++LG PIW TELDV++ NE++R +DLEV L
Sbjct: 1073298 QGATVGGIGIQGHIDSPVGAIVCSALDMLSVLGRPIWFTELDVSSSNEYVRGEDLEVMLW 1073119
Query: 453 EAFAHPAVGGIILWGF 406
EAFAHP+V G I + F
Sbjct: 1073118 EAFAHPSVEGTIYFIF 1073071
>ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complete sequence
Length = 18585042
Score = 131 bits (280), Expect(2) = 1e-054
Identities = 48/93 (51%), Positives = 72/93 (77%)
Frame = -2 / -2
Query: 426 GIILWGFWEMFMFREHAHLVDADGTINEAGRRYLALKQEWLTRMNGSVDHQGEFKFRGYH 247
GI+LWGFWE+ M RE+A+LV+ +G +NEAG+R+L +KQEWL+ G ++ + EF FRGYH
Sbjct: 5159498 GIMLWGFWELSMSRENANLVEGEGEVNEAGKRFLEVKQEWLSHAYGIINDESEFTFRGYH 5159319
Query: 246 GSYTVEVNTPSGKVARSFVVDKDSPVQVIALNV 148
G+Y VE+ TP+G V ++FVV+K VI++++
Sbjct: 5159318 GTYAVEICTPAGIVLKTFVVEKGDTPLVISIDL 5159220
Score = 121 bits (258), Expect(2) = 1e-054
Identities = 47/76 (61%), Positives = 60/76 (78%)
Frame = -2 / -1
Query: 633 RGAPVGGIGVQGHISHPVGEIICDSLDKLAILGLPIWITELDVTAENEHIRADDLEVFLR 454
+GA VGGIG+QGHI PVG I+C +LD L++LG PIW TELDV++ NE++R +DLEV L
Sbjct: 5160585 QGATVGGIGIQGHIDSPVGAIVCSALDMLSVLGRPIWFTELDVSSSNEYVRGEDLEVMLW 5160406
Query: 453 EAFAHPAVGGIILWGF 406
EAFAHP+V G I + F
Sbjct: 5160405 EAFAHPSVEGTIYFIF 5160358
>emb|BX828318.1|CNS0A4BA Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH76ZB12 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 2440
Score = 110 bits (234), Expect(3) = 4e-049
Identities = 43/73 (58%), Positives = 55/73 (75%)
Frame = -2 / +1
Query: 633 RGAPVGGIGVQGHISHPVGEIICDSLDKLAILGLPIWITELDVTAENEHIRADDLEVFLR 454
+GA VGGIG+QGHI PVG I+C +LD L++LG PIW TELDV++ NE++R +DLEV L
Sbjct: 1837 QGATVGGIGIQGHIDSPVGAIVCSALDMLSVLGRPIWFTELDVSSSNEYVRGEDLEVMLW 2016
Query: 453 EAFAHPAVGGIIL 415
EA P GI+L
Sbjct: 2017 EAICSPFSEGIML 2055
Score = 73.0 bits (153), Expect(3) = 4e-049
Identities = 25/41 (60%), Positives = 36/41 (87%)
Frame = -2 / +3
Query: 423 IILWGFWEMFMFREHAHLVDADGTINEAGRRYLALKQEWLT 301
I+LWGFWE+ M RE+A+LV+ +G +NEAG+R+L +KQEWL+
Sbjct: 2058 IMLWGFWELSMSRENANLVEGEGEVNEAGKRFLEVKQEWLS 2180
Score = 52.4 bits (108), Expect(3) = 4e-049
Identities = 22/48 (45%), Positives = 31/48 (64%)
Frame = -2 / +2
Query: 291 GSVDHQGEFKFRGYHGSYTVEVNTPSGKVARSFVVDKDSPVQVIALNV 148
GS F FRGYHG+Y VE+ TP+G V ++FVV K VI++++
Sbjct: 2192 GSQPMSQTFTFRGYHGTYAVEICTPAGIVLKTFVVAKGDTPLVISIDL 2335
>gb|AV540933.1|AV540933 AV540933 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ157e02F 3', mRNA sequence
Length = 400
Score = 171 bits (369), Expect = 1e-041
Identities = 64/108 (59%), Positives = 86/108 (79%)
Frame = -2 / -3
Query: 504 TAENEHIRADDLEVFLREAFAHPAVGGIILWGFWEMFMFREHAHLVDADGTINEAGRRYL 325
++ NEHIR DDLEV L +AFAHPAV G++LWGFWE+FM ++H+HLV+ DG +NEAG+R+L
Sbjct: 398 SSTNEHIRGDDLEVMLWKAFAHPAVEGVMLWGFWELFMTKKHSHLVNPDGEVNEAGKRFL 219
Query: 324 ALKQEWLTRMNGSVDHQGEFKFRGYHGSYTVEVNTPSGKVARSFVVDK 181
+K+EWL+ ++G ++ G +FRGYHGSYTVEV T K +FVVDK
Sbjct: 218 EIKREWLSFVDGEIEDGGGLEFRGYHGSYTVEVVTSESKYVSNFVVDK 75
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,445,195,813
Number of Sequences: 1013581
Number of extensions: 21291980
Number of successful extensions: 207005
Number of sequences better than 1.0e-020: 27
length of database: 302,980,290
effective HSP length: 55
effective length of database: 247,233,335
effective search space used: 38568400260
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)