TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2591194.2.1
(591 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AI992516.1|AI992516 701558085 A. thaliana, Ohio State cl... 160 5e-038
gb|AA042225.1|AA042225 24546 CD4-13 Arabidopsis thaliana cD... 157 2e-037
gb|AV793898.1|AV793898 AV793898 RAFL8 Arabidopsis thaliana ... 157 2e-037
gb|AV537619.1|AV537619 AV537619 Arabidopsis thaliana roots ... 157 2e-037
gb|AV540166.1|AV540166 AV540166 Arabidopsis thaliana roots ... 157 2e-037
gb|AV546304.1|AV546304 AV546304 Arabidopsis thaliana roots ... 157 2e-037
gb|CK118224.1|CK118224 217n04.p1 AtM1 Arabidopsis thaliana ... 157 2e-037
gb|CK118777.1|CK118777 216b24.p1 AtM1 Arabidopsis thaliana ... 157 2e-037
gb|BP586841.1|BP586841 BP586841 RAFL15 Arabidopsis thaliana... 157 2e-037
gb|BP790305.1|BP790305 BP790305 RAFL7 Arabidopsis thaliana ... 157 2e-037
gb|AY057492.1| Arabidopsis thaliana At1g76160/T23E18_10 mRN... 157 2e-037
ref|NM_106265.2| Arabidopsis thaliana SKS5; copper ion bind... 157 2e-037
gb|AV539026.1|AV539026 AV539026 Arabidopsis thaliana roots ... 155 1e-036
gb|AY136404.1| Arabidopsis thaliana pectinesterase, putativ... 155 1e-036
gb|BT000227.1| Arabidopsis thaliana pectinesterase, putativ... 155 1e-036
gb|BX836294.1|BX836294 BX836294 Arabidopsis thaliana Hormon... 155 1e-036
gb|AY081335.1| Arabidopsis thaliana pectinesterase-like pro... 154 2e-036
emb|AX507059.1| Sequence 1754 from Patent WO0216655 154 2e-036
gb|BT008899.1| Arabidopsis thaliana At4g22010 mRNA, complet... 154 2e-036
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 154 2e-036
emb|AL022140.1|ATF1N20 Arabidopsis thaliana DNA chromosome ... 154 2e-036
emb|AL161556.2|ATCHRIV56 Arabidopsis thaliana DNA chromosom... 154 2e-036
ref|NM_118322.3| Arabidopsis thaliana SKS4; copper ion bind... 154 2e-036
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 154 2e-036
gb|AV807347.1|AV807347 AV807347 RAFL9 Arabidopsis thaliana ... 150 3e-035
gb|AC009978.3|AC009978 Genomic sequence for Arabidopsis tha... 150 4e-035
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 150 4e-035
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 150 4e-035
gb|BP790694.1|BP790694 BP790694 RAFL7 Arabidopsis thaliana ... 149 5e-035
gb|CD530290.1|CD530290 05J01 Arabidopsis Leaf Senescence Li... 149 7e-035
gb|AV544145.1|AV544145 AV544145 Arabidopsis thaliana roots ... 149 7e-035
gb|AV544367.1|AV544367 AV544367 Arabidopsis thaliana roots ... 149 7e-035
gb|AV546963.1|AV546963 AV546963 Arabidopsis thaliana roots ... 149 7e-035
gb|CB254770.1|CB254770 60-E012994-019-004-H15-SP6r MPIZ-ADI... 149 7e-035
gb|AY072215.1| Arabidopsis thaliana putative pectinesterase... 149 7e-035
gb|AY096593.1| Arabidopsis thaliana putative pectinesterase... 149 7e-035
emb|AX507015.1| Sequence 1710 from Patent WO0216655 149 7e-035
ref|NM_120004.3| Arabidopsis thaliana SKS9; copper ion bind... 149 7e-035
gb|AI998955.1|AI998955 701547724 A. thaliana, Columbia Col-... 148 1e-034
gb|AV794098.1|AV794098 AV794098 RAFL8 Arabidopsis thaliana ... 148 1e-034
gb|CB261040.1|CB261040 39-E9570-012-004-M09-T7R MPIZ-ADIS-0... 148 1e-034
gb|AV547447.1|AV547447 AV547447 Arabidopsis thaliana roots ... 148 1e-034
gb|AY059814.1| Arabidopsis thaliana Unknown protein mRNA, c... 148 1e-034
gb|AY128725.1| Arabidopsis thaliana unknown protein (At1g41... 148 1e-034
emb|CQ805442.1| Sequence 1853 from Patent WO2004035798 148 1e-034
ref|NM_103408.1| Arabidopsis thaliana SKS6; pectinesterase ... 148 1e-034
gb|BP783865.1|BP783865 BP783865 RAFL7 Arabidopsis thaliana ... 148 2e-034
gb|BP789378.1|BP789378 BP789378 RAFL7 Arabidopsis thaliana ... 146 6e-034
gb|AV793285.1|AV793285 AV793285 RAFL7 Arabidopsis thaliana ... 145 9e-034
ref|NM_102033.1| Arabidopsis thaliana SKS8; copper ion bind... 144 3e-033
gb|AV788530.1|AV788530 AV788530 RAFL6 Arabidopsis thaliana ... 143 6e-033
ref|NM_118949.1| Arabidopsis thaliana SKS10; copper ion bin... 141 2e-032
emb|AX059467.1| Sequence 200 from Patent WO0055325 141 2e-032
emb|AX059475.1| Sequence 208 from Patent WO0055325 141 2e-032
gb|AC008046.4|AC008046 Arabidopsis thaliana chromosome I BA... 141 2e-032
gb|AC022456.5|AC022456 Arabidopsis thaliana chromosome 1 BA... 141 2e-032
dbj|AB062093.1| Arabidopsis thaliana DNA, chromosome 1 cent... 141 2e-032
gb|CK117520.1|CK117520 218e09.p1 AtM1 Arabidopsis thaliana ... 140 3e-032
gb|BP590584.1|BP590584 BP590584 RAFL15 Arabidopsis thaliana... 140 3e-032
gb|AC069558.5|AC069558 Genomic Sequence For Arabidopsis tha... 139 5e-032
emb|BX817191.1|CNS0AE02 Arabidopsis thaliana Full-length cD... 139 5e-032
emb|AL035539.1|ATF22I13 Arabidopsis thaliana DNA chromosome... 139 5e-032
emb|AL161593.2|ATCHRIV89 Arabidopsis thaliana DNA chromosom... 139 5e-032
gb|AI996542.1|AI996542 701667381 A. thaliana, Columbia Col-... 138 1e-031
gb|AV793925.1|AV793925 AV793925 RAFL8 Arabidopsis thaliana ... 138 1e-031
gb|BP618171.1|BP618171 BP618171 RAFL16 Arabidopsis thaliana... 137 3e-031
ref|NM_102034.1| Arabidopsis thaliana SKS7; copper ion bind... 136 5e-031
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 136 7e-031
gb|AC007727.2|F8K7 Arabidopsis thaliana chromosome 1 BAC F8... 136 7e-031
gb|AC013482.2|AC013482 Genomic sequence for Arabidopsis tha... 136 7e-031
gb|AV800594.1|AV800594 AV800594 RAFL9 Arabidopsis thaliana ... 106 6e-030
emb|AL082756.1|CNS00O4M Arabidopsis thaliana genome survey ... 132 1e-029
emb|AL035524.1|ATT13J8 Arabidopsis thaliana DNA chromosome ... 132 1e-029
emb|AL161572.2|ATCHRIV68 Arabidopsis thaliana DNA chromosom... 132 1e-029
gb|BP610476.1|BP610476 BP610476 RAFL16 Arabidopsis thaliana... 110 3e-029
gb|AV552337.1|AV552337 AV552337 Arabidopsis thaliana roots ... 128 2e-028
gb|AV796811.1|AV796811 AV796811 RAFL9 Arabidopsis thaliana ... 126 5e-028
gb|AV809884.1|AV809884 AV809884 RAFL9 Arabidopsis thaliana ... 126 5e-028
gb|BP613380.1|BP613380 BP613380 RAFL16 Arabidopsis thaliana... 126 5e-028
gb|BP777725.1|BP777725 BP777725 RAFL7 Arabidopsis thaliana ... 73 7e-028
gb|AV549603.1|AV549603 AV549603 Arabidopsis thaliana roots ... 126 7e-028
gb|AV790863.1|AV790863 AV790863 RAFL7 Arabidopsis thaliana ... 125 1e-027
gb|AV799902.1|AV799902 AV799902 RAFL9 Arabidopsis thaliana ... 125 1e-027
gb|AV809903.1|AV809903 AV809903 RAFL9 Arabidopsis thaliana ... 125 1e-027
gb|AV809938.1|AV809938 AV809938 RAFL9 Arabidopsis thaliana ... 125 1e-027
gb|AV812818.1|AV812818 AV812818 RAFL9 Arabidopsis thaliana ... 125 1e-027
gb|AV816772.1|AV816772 AV816772 RAFL9 Arabidopsis thaliana ... 125 1e-027
gb|BP621149.1|BP621149 BP621149 RAFL16 Arabidopsis thaliana... 125 1e-027
gb|BP785520.1|BP785520 BP785520 RAFL7 Arabidopsis thaliana ... 125 1e-027
gb|BP786781.1|BP786781 BP786781 RAFL7 Arabidopsis thaliana ... 125 1e-027
gb|BP795623.1|BP795623 BP795623 RAFL7 Arabidopsis thaliana ... 125 1e-027
gb|BP654929.1|BP654929 BP654929 RAFL19 Arabidopsis thaliana... 124 2e-027
gb|BP782767.1|BP782767 BP782767 RAFL7 Arabidopsis thaliana ... 123 5e-027
gb|BP633504.1|BP633504 BP633504 RAFL17 Arabidopsis thaliana... 94 9e-027
gb|AV791783.1|AV791783 AV791783 RAFL7 Arabidopsis thaliana ... 122 9e-027
gb|BP781820.1|BP781820 BP781820 RAFL7 Arabidopsis thaliana ... 122 9e-027
gb|AV820811.1|AV820811 AV820811 RAFL11 Arabidopsis thaliana... 115 1e-026
gb|AV786802.1|AV786802 AV786802 RAFL6 Arabidopsis thaliana ... 120 3e-026
gb|AV542755.1|AV542755 AV542755 Arabidopsis thaliana roots ... 120 3e-026
gb|BP611142.1|BP611142 BP611142 RAFL16 Arabidopsis thaliana... 120 3e-026
gb|BP583070.1|BP583070 BP583070 RAFL14 Arabidopsis thaliana... 85 1e-025
gb|AV813279.1|AV813279 AV813279 RAFL9 Arabidopsis thaliana ... 118 2e-025
gb|BP788739.1|BP788739 BP788739 RAFL7 Arabidopsis thaliana ... 117 2e-025
gb|BP779167.1|BP779167 BP779167 RAFL7 Arabidopsis thaliana ... 116 8e-025
gb|BP780098.1|BP780098 BP780098 RAFL7 Arabidopsis thaliana ... 116 8e-025
gb|AQ967962.1|AQ967962 LERIW71TR LERG Arabidopsis thaliana ... 115 1e-024
gb|BP785666.1|BP785666 BP785666 RAFL7 Arabidopsis thaliana ... 114 3e-024
gb|BP646752.1|BP646752 BP646752 RAFL19 Arabidopsis thaliana... 113 4e-024
gb|BP601870.1|BP601870 BP601870 RAFL16 Arabidopsis thaliana... 113 5e-024
gb|BP783651.1|BP783651 BP783651 RAFL7 Arabidopsis thaliana ... 113 5e-024
gb|BP791966.1|BP791966 BP791966 RAFL7 Arabidopsis thaliana ... 113 5e-024
gb|BP791427.1|BP791427 BP791427 RAFL7 Arabidopsis thaliana ... 112 7e-024
gb|CD530123.1|CD530123 39L4 Arabidopsis Leaf Senescence Lib... 112 1e-023
gb|CD533976.1|CD533976 34M4 Arabidopsis Leaf Senescence Lib... 112 1e-023
gb|AV532213.1|AV532213 AV532213 Arabidopsis thaliana flower... 112 1e-023
gb|AV548448.1|AV548448 AV548448 Arabidopsis thaliana roots ... 112 1e-023
gb|BP655818.1|BP655818 BP655818 RAFL19 Arabidopsis thaliana... 112 1e-023
gb|BP659146.1|BP659146 BP659146 RAFL19 Arabidopsis thaliana... 112 1e-023
gb|AY056409.1| Arabidopsis thaliana AT3g13400/MRP15_3 mRNA,... 112 1e-023
gb|AY072225.1| Arabidopsis thaliana putative pollen specifi... 112 1e-023
gb|AY096473.1| Arabidopsis thaliana putative pollen-specifi... 112 1e-023
dbj|AP000603.1| Arabidopsis thaliana genomic DNA, chromosom... 112 1e-023
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 112 1e-023
ref|NM_112185.2| Arabidopsis thaliana SKS13; copper ion bin... 112 1e-023
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 112 1e-023
gb|BP643869.1|BP643869 BP643869 RAFL19 Arabidopsis thaliana... 111 1e-023
gb|BP570311.1|BP570311 BP570311 RAFL14 Arabidopsis thaliana... 101 1e-023
gb|AV799843.1|AV799843 AV799843 RAFL9 Arabidopsis thaliana ... 93 2e-023
gb|AV815329.1|AV815329 AV815329 RAFL9 Arabidopsis thaliana ... 111 3e-023
gb|BP657564.1|BP657564 BP657564 RAFL19 Arabidopsis thaliana... 111 3e-023
gb|BP784168.1|BP784168 BP784168 RAFL7 Arabidopsis thaliana ... 111 3e-023
gb|BP793591.1|BP793591 BP793591 RAFL7 Arabidopsis thaliana ... 111 3e-023
gb|BP795093.1|BP795093 BP795093 RAFL7 Arabidopsis thaliana ... 111 3e-023
gb|BP666469.1|BP666469 BP666469 RAFL21 Arabidopsis thaliana... 76 4e-023
gb|BP640164.1|BP640164 BP640164 RAFL19 Arabidopsis thaliana... 110 5e-023
gb|BP639377.1|BP639377 BP639377 RAFL19 Arabidopsis thaliana... 108 1e-022
gb|BP788330.1|BP788330 BP788330 RAFL7 Arabidopsis thaliana ... 92 1e-022
gb|AV552616.1|AV552616 AV552616 Arabidopsis thaliana roots ... 108 2e-022
gb|BP638990.1|BP638990 BP638990 RAFL19 Arabidopsis thaliana... 90 2e-022
gb|BP665603.1|BP665603 BP665603 RAFL21 Arabidopsis thaliana... 106 5e-022
gb|AI995603.1|AI995603 701675059 A. thaliana, Columbia Col-... 105 1e-021
gb|AV537452.1|AV537452 AV537452 Arabidopsis thaliana roots ... 105 1e-021
gb|AV541839.1|AV541839 AV541839 Arabidopsis thaliana roots ... 105 1e-021
gb|AV541870.1|AV541870 AV541870 Arabidopsis thaliana roots ... 105 1e-021
gb|AV548867.1|AV548867 AV548867 Arabidopsis thaliana roots ... 105 1e-021
gb|AV558425.1|AV558425 AV558425 Arabidopsis thaliana green ... 105 1e-021
gb|AV558633.1|AV558633 AV558633 Arabidopsis thaliana green ... 105 1e-021
gb|BP598501.1|BP598501 BP598501 RAFL16 Arabidopsis thaliana... 105 1e-021
gb|BP604333.1|BP604333 BP604333 RAFL16 Arabidopsis thaliana... 105 1e-021
gb|BP619415.1|BP619415 BP619415 RAFL16 Arabidopsis thaliana... 105 1e-021
gb|AY094401.1| Arabidopsis thaliana AT5g66920/MUD21_18 mRNA... 105 1e-021
gb|BT000862.1| Arabidopsis thaliana At5g66920/MUD21_18 mRNA... 105 1e-021
gb|AY084759.1| Arabidopsis thaliana clone 116979 mRNA, comp... 105 1e-021
emb|BX831134.1|CNS09ZEQ Arabidopsis thaliana Full-length cD... 105 1e-021
ref|NM_126091.2| Arabidopsis thaliana SKS17; copper ion bin... 105 1e-021
gb|AI999238.1|AI999238 701555127 A. thaliana, Columbia Col-... 105 2e-021
gb|BT005910.1| Arabidopsis thaliana At1g55560 gene, complet... 105 2e-021
gb|AC005223.1| Arabidopsis thaliana chromosome I BAC T5A14,... 105 2e-021
dbj|AK118598.1| Arabidopsis thaliana At1g55560 mRNA for unk... 105 2e-021
emb|AJ249211.1|ATH249211 Arabidopsis thaliana mRNA for BNH ... 105 2e-021
ref|NM_104432.2| Arabidopsis thaliana SKS14; copper ion bin... 105 2e-021
gb|BP639469.1|BP639469 BP639469 RAFL19 Arabidopsis thaliana... 104 2e-021
gb|AV792234.1|AV792234 AV792234 RAFL7 Arabidopsis thaliana ... 104 3e-021
gb|AV793501.1|AV793501 AV793501 RAFL8 Arabidopsis thaliana ... 104 3e-021
gb|AU230778.1|AU230778 AU230778 RAFL19 Arabidopsis thaliana... 103 4e-021
gb|BP648595.1|BP648595 BP648595 RAFL19 Arabidopsis thaliana... 103 4e-021
gb|AV439987.1|AV439987 AV439987 Arabidopsis thaliana above-... 103 6e-021
gb|AV521580.1|AV521580 AV521580 Arabidopsis thaliana aboveg... 103 6e-021
gb|BP595846.1|BP595846 BP595846 RAFL15 Arabidopsis thaliana... 103 6e-021
gb|BP781816.1|BP781816 BP781816 RAFL7 Arabidopsis thaliana ... 103 6e-021
gb|BP792563.1|BP792563 BP792563 RAFL7 Arabidopsis thaliana ... 103 6e-021
gb|AV564905.1|AV564905 AV564905 Arabidopsis thaliana green ... 102 8e-021
gb|AV565276.1|AV565276 AV565276 Arabidopsis thaliana green ... 102 8e-021
>gb|AI992516.1|AI992516 701558085 A. thaliana, Ohio State clone set Arabidopsis thaliana
cDNA clone 701558085, mRNA sequence
Length = 509
Score = 160 bits (343), Expect = 5e-038
Identities = 64/81 (79%), Positives = 71/81 (87%)
Frame = -1 / -1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
NA+AR T+QVYP SWTAI + LDNVGMWN+RSE WARQYLGQQ YLRVY+P+ S RDE P
Sbjct: 422 NAVARCTVQVYPSSWTAILIALDNVGMWNLRSEFWARQYLGQQLYLRVYTPSTSLRDEYP 243
Query: 402 IPKNALLCGRASGRRTRPL*S 340
IPKNALLCGRASGR TRPL*+
Sbjct: 242 IPKNALLCGRASGRSTRPL*A 180
Score = 112 bits (240), Expect = 7e-024
Identities = 52/80 (65%), Positives = 57/80 (71%)
Frame = +2 / +1
Query: 344 QRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIPTLSSG 523
Q GLV RP A PQ AFLGIG+SS E G TR+ NC P+YCLAQ SDL FHIPTLSS
Sbjct: 184 QSGLVLRPLALPQRRAFLGIGYSSLREVEGVYTRKYNCCPKYCLAQNSDLRFHIPTLSSA 363
Query: 524 M*IAVHD*GYTCNVYRAMAF 583
+ IAVH+ GYT V RA AF
Sbjct: 364 INIAVHELGYT*TVQRATAF 423
>gb|AA042225.1|AA042225 24546 CD4-13 Arabidopsis thaliana cDNA clone E4F3T7, mRNA sequence
Length = 603
Score = 157 bits (338), Expect = 2e-037
Identities = 63/81 (77%), Positives = 71/81 (87%)
Frame = -1 / +1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A+AR T+QVYP SWTAI + LDNVGMWN+RSE WARQYLGQQ YLRVY+P+ S RDE P
Sbjct: 88 DAVARCTVQVYPSSWTAILIALDNVGMWNLRSEFWARQYLGQQLYLRVYTPSTSLRDEYP 267
Query: 402 IPKNALLCGRASGRRTRPL*S 340
IPKNALLCGRASGR TRPL*+
Sbjct: 268 IPKNALLCGRASGRSTRPL*A 330
Score = 110 bits (234), Expect = 5e-023
Identities = 51/79 (64%), Positives = 56/79 (70%)
Frame = +2 / -2
Query: 344 QRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIPTLSSG 523
Q GLV RP A PQ AFLGIG+SS E G TR+ NC P+YCLAQ SDL FHIPTLSS
Sbjct: 326 QSGLVLRPLALPQRRAFLGIGYSSLREVEGVYTRKYNCCPKYCLAQNSDLRFHIPTLSSA 147
Query: 524 M*IAVHD*GYTCNVYRAMA 580
+ IAVH+ GYT V RA A
Sbjct: 146 INIAVHELGYT*TVQRATA 90
>gb|AV793898.1|AV793898 AV793898 RAFL8 Arabidopsis thaliana cDNA clone RAFL08-10-L06 3',
mRNA sequence
Length = 442
Score = 157 bits (338), Expect = 2e-037
Identities = 63/81 (77%), Positives = 71/81 (87%)
Frame = -1 / -2
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A+AR T+QVYP SWTAI + LDNVGMWN+RSE WARQYLGQQ YLRVY+P+ S RDE P
Sbjct: 414 DAVARCTVQVYPSSWTAILIALDNVGMWNLRSEFWARQYLGQQLYLRVYTPSTSLRDEYP 235
Query: 402 IPKNALLCGRASGRRTRPL*S 340
IPKNALLCGRASGR TRPL*+
Sbjct: 234 IPKNALLCGRASGRSTRPL*A 172
Score = 110 bits (234), Expect = 5e-023
Identities = 51/79 (64%), Positives = 56/79 (70%)
Frame = +2 / +2
Query: 344 QRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIPTLSSG 523
Q GLV RP A PQ AFLGIG+SS E G TR+ NC P+YCLAQ SDL FHIPTLSS
Sbjct: 176 QSGLVLRPLALPQRRAFLGIGYSSLREVEGVYTRKYNCCPKYCLAQNSDLKFHIPTLSSA 355
Query: 524 M*IAVHD*GYTCNVYRAMA 580
+ IAVH+ GYT V RA A
Sbjct: 356 INIAVHELGYT*TVQRATA 412
>gb|AV537619.1|AV537619 AV537619 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ09h05F 3', mRNA sequence
Length = 602
Score = 157 bits (338), Expect = 2e-037
Identities = 63/81 (77%), Positives = 71/81 (87%)
Frame = -1 / -1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A+AR T+QVYP SWTAI + LDNVGMWN+RSE WARQYLGQQ YLRVY+P+ S RDE P
Sbjct: 428 DAVARCTVQVYPSSWTAILIALDNVGMWNLRSEFWARQYLGQQLYLRVYTPSTSLRDEYP 249
Query: 402 IPKNALLCGRASGRRTRPL*S 340
IPKNALLCGRASGR TRPL*+
Sbjct: 248 IPKNALLCGRASGRSTRPL*A 186
Score = 110 bits (234), Expect = 5e-023
Identities = 51/79 (64%), Positives = 56/79 (70%)
Frame = +2 / +1
Query: 344 QRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIPTLSSG 523
Q GLV RP A PQ AFLGIG+SS E G TR+ NC P+YCLAQ SDL FHIPTLSS
Sbjct: 190 QSGLVLRPLALPQRRAFLGIGYSSLREVEGVYTRKYNCCPKYCLAQNSDLRFHIPTLSSA 369
Query: 524 M*IAVHD*GYTCNVYRAMA 580
+ IAVH+ GYT V RA A
Sbjct: 370 INIAVHELGYT*TVQRATA 426
>gb|AV540166.1|AV540166 AV540166 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ145g02F 3', mRNA sequence
Length = 596
Score = 157 bits (338), Expect = 2e-037
Identities = 63/81 (77%), Positives = 71/81 (87%)
Frame = -1 / -2
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A+AR T+QVYP SWTAI + LDNVGMWN+RSE WARQYLGQQ YLRVY+P+ S RDE P
Sbjct: 481 DAVARCTVQVYPSSWTAILIALDNVGMWNLRSEFWARQYLGQQLYLRVYTPSTSLRDEYP 302
Query: 402 IPKNALLCGRASGRRTRPL*S 340
IPKNALLCGRASGR TRPL*+
Sbjct: 301 IPKNALLCGRASGRSTRPL*A 239
Score = 110 bits (234), Expect = 5e-023
Identities = 51/79 (64%), Positives = 56/79 (70%)
Frame = +2 / +3
Query: 344 QRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIPTLSSG 523
Q GLV RP A PQ AFLGIG+SS E G TR+ NC P+YCLAQ SDL FHIPTLSS
Sbjct: 243 QSGLVLRPLALPQRRAFLGIGYSSLREVEGVYTRKYNCCPKYCLAQNSDLRFHIPTLSSA 422
Query: 524 M*IAVHD*GYTCNVYRAMA 580
+ IAVH+ GYT V RA A
Sbjct: 423 INIAVHELGYT*TVQRATA 479
>gb|AV546304.1|AV546304 AV546304 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZL11g06F 3', mRNA sequence
Length = 601
Score = 157 bits (338), Expect = 2e-037
Identities = 63/81 (77%), Positives = 71/81 (87%)
Frame = -1 / -1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A+AR T+QVYP SWTAI + LDNVGMWN+RSE WARQYLGQQ YLRVY+P+ S RDE P
Sbjct: 481 DAVARCTVQVYPSSWTAILIALDNVGMWNLRSEFWARQYLGQQLYLRVYTPSTSLRDEYP 302
Query: 402 IPKNALLCGRASGRRTRPL*S 340
IPKNALLCGRASGR TRPL*+
Sbjct: 301 IPKNALLCGRASGRSTRPL*A 239
Score = 110 bits (234), Expect = 5e-023
Identities = 51/79 (64%), Positives = 56/79 (70%)
Frame = +2 / +3
Query: 344 QRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIPTLSSG 523
Q GLV RP A PQ AFLGIG+SS E G TR+ NC P+YCLAQ SDL FHIPTLSS
Sbjct: 243 QSGLVLRPLALPQRRAFLGIGYSSLREVEGVYTRKYNCCPKYCLAQNSDLRFHIPTLSSA 422
Query: 524 M*IAVHD*GYTCNVYRAMA 580
+ IAVH+ GYT V RA A
Sbjct: 423 INIAVHELGYT*TVQRATA 479
>gb|CK118224.1|CK118224 217n04.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011N04217
5-PRIME, mRNA sequence
Length = 558
Score = 157 bits (338), Expect = 2e-037
Identities = 63/81 (77%), Positives = 71/81 (87%)
Frame = -1 / +3
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A+AR T+QVYP SWTAI + LDNVGMWN+RSE WARQYLGQQ YLRVY+P+ S RDE P
Sbjct: 210 DAVARCTVQVYPSSWTAILIALDNVGMWNLRSEFWARQYLGQQLYLRVYTPSTSLRDEYP 389
Query: 402 IPKNALLCGRASGRRTRPL*S 340
IPKNALLCGRASGR TRPL*+
Sbjct: 390 IPKNALLCGRASGRSTRPL*A 452
Score = 110 bits (234), Expect = 5e-023
Identities = 51/79 (64%), Positives = 56/79 (70%)
Frame = +2 / -3
Query: 344 QRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIPTLSSG 523
Q GLV RP A PQ AFLGIG+SS E G TR+ NC P+YCLAQ SDL FHIPTLSS
Sbjct: 448 QSGLVLRPLALPQRRAFLGIGYSSLREVEGVYTRKYNCCPKYCLAQNSDLRFHIPTLSSA 269
Query: 524 M*IAVHD*GYTCNVYRAMA 580
+ IAVH+ GYT V RA A
Sbjct: 268 INIAVHELGYT*TVQRATA 212
>gb|CK118777.1|CK118777 216b24.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011B24216
5-PRIME, mRNA sequence
Length = 673
Score = 157 bits (338), Expect = 2e-037
Identities = 63/81 (77%), Positives = 71/81 (87%)
Frame = -1 / +3
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A+AR T+QVYP SWTAI + LDNVGMWN+RSE WARQYLGQQ YLRVY+P+ S RDE P
Sbjct: 180 DAVARCTVQVYPSSWTAILIALDNVGMWNLRSEFWARQYLGQQLYLRVYTPSTSLRDEYP 359
Query: 402 IPKNALLCGRASGRRTRPL*S 340
IPKNALLCGRASGR TRPL*+
Sbjct: 360 IPKNALLCGRASGRSTRPL*A 422
Score = 110 bits (234), Expect = 5e-023
Identities = 51/79 (64%), Positives = 56/79 (70%)
Frame = +2 / -1
Query: 344 QRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIPTLSSG 523
Q GLV RP A PQ AFLGIG+SS E G TR+ NC P+YCLAQ SDL FHIPTLSS
Sbjct: 418 QSGLVLRPLALPQRRAFLGIGYSSLREVEGVYTRKYNCCPKYCLAQNSDLRFHIPTLSSA 239
Query: 524 M*IAVHD*GYTCNVYRAMA 580
+ IAVH+ GYT V RA A
Sbjct: 238 INIAVHELGYT*TVQRATA 182
>gb|BP586841.1|BP586841 BP586841 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-07-M18 3',
mRNA sequence
Length = 458
Score = 157 bits (338), Expect = 2e-037
Identities = 63/81 (77%), Positives = 71/81 (87%)
Frame = -1 / -3
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A+AR T+QVYP SWTAI + LDNVGMWN+RSE WARQYLGQQ YLRVY+P+ S RDE P
Sbjct: 441 DAVARCTVQVYPSSWTAILIALDNVGMWNLRSEFWARQYLGQQLYLRVYTPSTSLRDEYP 262
Query: 402 IPKNALLCGRASGRRTRPL*S 340
IPKNALLCGRASGR TRPL*+
Sbjct: 261 IPKNALLCGRASGRSTRPL*A 199
Score = 110 bits (234), Expect = 5e-023
Identities = 51/79 (64%), Positives = 56/79 (70%)
Frame = +2 / +2
Query: 344 QRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIPTLSSG 523
Q GLV RP A PQ AFLGIG+SS E G TR+ NC P+YCLAQ SDL FHIPTLSS
Sbjct: 203 QSGLVLRPLALPQRRAFLGIGYSSLREVEGVYTRKYNCCPKYCLAQNSDLRFHIPTLSSA 382
Query: 524 M*IAVHD*GYTCNVYRAMA 580
+ IAVH+ GYT V RA A
Sbjct: 383 INIAVHELGYT*TVQRATA 439
>gb|BP790305.1|BP790305 BP790305 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-42-K15 3',
mRNA sequence
Length = 411
Score = 157 bits (338), Expect = 2e-037
Identities = 63/81 (77%), Positives = 71/81 (87%)
Frame = -1 / -3
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A+AR T+QVYP SWTAI + LDNVGMWN+RSE WARQYLGQQ YLRVY+P+ S RDE P
Sbjct: 373 DAVARCTVQVYPSSWTAILIALDNVGMWNLRSEFWARQYLGQQLYLRVYTPSTSLRDEYP 194
Query: 402 IPKNALLCGRASGRRTRPL*S 340
IPKNALLCGRASGR TRPL*+
Sbjct: 193 IPKNALLCGRASGRSTRPL*A 131
Score = 110 bits (234), Expect = 5e-023
Identities = 51/79 (64%), Positives = 56/79 (70%)
Frame = +2 / +3
Query: 344 QRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIPTLSSG 523
Q GLV RP A PQ AFLGIG+SS E G TR+ NC P+YCLAQ SDL FHIPTLSS
Sbjct: 135 QSGLVLRPLALPQRRAFLGIGYSSLREVEGVYTRKYNCCPKYCLAQNSDLRFHIPTLSSA 314
Query: 524 M*IAVHD*GYTCNVYRAMA 580
+ IAVH+ GYT V RA A
Sbjct: 315 INIAVHELGYT*TVQRATA 371
>gb|AY057492.1| Arabidopsis thaliana At1g76160/T23E18_10 mRNA, complete cds
Length = 1934
Score = 157 bits (338), Expect = 2e-037
Identities = 63/81 (77%), Positives = 71/81 (87%)
Frame = -1 / +1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A+AR T+QVYP SWTAI + LDNVGMWN+RSE WARQYLGQQ YLRVY+P+ S RDE P
Sbjct: 1453 DAVARCTVQVYPSSWTAILIALDNVGMWNLRSEFWARQYLGQQLYLRVYTPSTSLRDEYP 1632
Query: 402 IPKNALLCGRASGRRTRPL*S 340
IPKNALLCGRASGR TRPL*+
Sbjct: 1633 IPKNALLCGRASGRSTRPL*A 1695
Score = 110 bits (234), Expect = 5e-023
Identities = 51/79 (64%), Positives = 56/79 (70%)
Frame = +2 / -1
Query: 344 QRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIPTLSSG 523
Q GLV RP A PQ AFLGIG+SS E G TR+ NC P+YCLAQ SDL FHIPTLSS
Sbjct: 1691 QSGLVLRPLALPQRRAFLGIGYSSLREVEGVYTRKYNCCPKYCLAQNSDLRFHIPTLSSA 1512
Query: 524 M*IAVHD*GYTCNVYRAMA 580
+ IAVH+ GYT V RA A
Sbjct: 1511 INIAVHELGYT*TVQRATA 1455
>ref|NM_106265.2| Arabidopsis thaliana SKS5; copper ion binding AT1G76160 (SKS5) mRNA,
complete cds
Length = 1987
Score = 157 bits (338), Expect = 2e-037
Identities = 63/81 (77%), Positives = 71/81 (87%)
Frame = -1 / +3
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A+AR T+QVYP SWTAI + LDNVGMWN+RSE WARQYLGQQ YLRVY+P+ S RDE P
Sbjct: 1479 DAVARCTVQVYPSSWTAILIALDNVGMWNLRSEFWARQYLGQQLYLRVYTPSTSLRDEYP 1658
Query: 402 IPKNALLCGRASGRRTRPL*S 340
IPKNALLCGRASGR TRPL*+
Sbjct: 1659 IPKNALLCGRASGRSTRPL*A 1721
Score = 110 bits (234), Expect = 5e-023
Identities = 51/79 (64%), Positives = 56/79 (70%)
Frame = +2 / -1
Query: 344 QRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIPTLSSG 523
Q GLV RP A PQ AFLGIG+SS E G TR+ NC P+YCLAQ SDL FHIPTLSS
Sbjct: 1717 QSGLVLRPLALPQRRAFLGIGYSSLREVEGVYTRKYNCCPKYCLAQNSDLRFHIPTLSSA 1538
Query: 524 M*IAVHD*GYTCNVYRAMA 580
+ IAVH+ GYT V RA A
Sbjct: 1537 INIAVHELGYT*TVQRATA 1481
>gb|AV539026.1|AV539026 AV539026 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ125g07F 3', mRNA sequence
Length = 610
Score = 155 bits (333), Expect = 1e-036
Identities = 62/81 (76%), Positives = 71/81 (87%)
Frame = -1 / -1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A+AR T+QVYP SWTAI + LDNVGMWN+R E WARQYLGQQ YLRVY+P++S RDE P
Sbjct: 484 DAVARCTVQVYPSSWTAILIALDNVGMWNLRCEFWARQYLGQQVYLRVYTPSSSLRDEYP 305
Query: 402 IPKNALLCGRASGRRTRPL*S 340
IPKNALLCGRASGR TRPL*+
Sbjct: 304 IPKNALLCGRASGRSTRPL*A 242
Score = 104 bits (222), Expect = 2e-021
Identities = 49/79 (62%), Positives = 54/79 (68%)
Frame = +2 / +3
Query: 344 QRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIPTLSSG 523
Q GLV RP A PQ AFLGIG+SS E G TR+ C P+YCLAQ S L FHIPTLSS
Sbjct: 246 QSGLVLRPLALPQRRAFLGIGYSSLRELEGVYTRKYTCCPKYCLAQNSHLRFHIPTLSSA 425
Query: 524 M*IAVHD*GYTCNVYRAMA 580
+ IAVH+ GYT V RA A
Sbjct: 426 INIAVHELGYT*TVQRATA 482
>gb|AY136404.1| Arabidopsis thaliana pectinesterase, putative (At1g76160) mRNA,
complete cds
Length = 1914
Score = 155 bits (333), Expect = 1e-036
Identities = 62/81 (76%), Positives = 70/81 (86%)
Frame = -1 / +1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A+AR T+QVYP SWTAI + LDNVGMWN+R E WARQYLGQQ YLRVY+P+ S RDE P
Sbjct: 1435 DAVARCTVQVYPSSWTAILIALDNVGMWNLRPEFWARQYLGQQLYLRVYTPSTSLRDEYP 1614
Query: 402 IPKNALLCGRASGRRTRPL*S 340
IPKNALLCGRASGR TRPL*+
Sbjct: 1615 IPKNALLCGRASGRSTRPL*A 1677
Score = 106 bits (227), Expect = 5e-022
Identities = 50/79 (63%), Positives = 55/79 (69%)
Frame = +2 / -2
Query: 344 QRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIPTLSSG 523
Q GLV RP A PQ AFLGIG+SS E G TR+ NC P+YCLAQ S L FHIPTLSS
Sbjct: 1673 QSGLVLRPLALPQRRAFLGIGYSSLREVEGVYTRKYNCCPKYCLAQNSGLRFHIPTLSSA 1494
Query: 524 M*IAVHD*GYTCNVYRAMA 580
+ IAVH+ GYT V RA A
Sbjct: 1493 INIAVHELGYT*TVQRATA 1437
>gb|BT000227.1| Arabidopsis thaliana pectinesterase, putative (At1g76160) mRNA,
complete cds
Length = 1662
Score = 155 bits (333), Expect = 1e-036
Identities = 62/81 (76%), Positives = 70/81 (86%)
Frame = -1 / +1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A+AR T+QVYP SWTAI + LDNVGMWN+R E WARQYLGQQ YLRVY+P+ S RDE P
Sbjct: 1387 DAVARCTVQVYPSSWTAILIALDNVGMWNLRPEFWARQYLGQQLYLRVYTPSTSLRDEYP 1566
Query: 402 IPKNALLCGRASGRRTRPL*S 340
IPKNALLCGRASGR TRPL*+
Sbjct: 1567 IPKNALLCGRASGRSTRPL*A 1629
Score = 106 bits (227), Expect = 5e-022
Identities = 50/79 (63%), Positives = 55/79 (69%)
Frame = +2 / -2
Query: 344 QRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIPTLSSG 523
Q GLV RP A PQ AFLGIG+SS E G TR+ NC P+YCLAQ S L FHIPTLSS
Sbjct: 1625 QSGLVLRPLALPQRRAFLGIGYSSLREVEGVYTRKYNCCPKYCLAQNSGLRFHIPTLSSA 1446
Query: 524 M*IAVHD*GYTCNVYRAMA 580
+ IAVH+ GYT V RA A
Sbjct: 1445 INIAVHELGYT*TVQRATA 1389
>gb|BX836294.1|BX836294 BX836294 Arabidopsis thaliana Hormone Treated Callus Col-0
Arabidopsis thaliana cDNA clone GSLTPGH72ZB11 3PRIM,
mRNA sequence
Length = 814
Score = 155 bits (332), Expect = 1e-036
Identities = 62/81 (76%), Positives = 70/81 (86%)
Frame = -1 / -1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A+ R T+QVYP SWTAI + LDNVGMWN+RSE WARQYLGQQ YLRVY+P+ S RDE P
Sbjct: 394 DAVNRCTVQVYPSSWTAILIALDNVGMWNLRSEFWARQYLGQQLYLRVYTPSTSLRDEYP 215
Query: 402 IPKNALLCGRASGRRTRPL*S 340
IPKNALLCGRASGR TRPL*+
Sbjct: 214 IPKNALLCGRASGRSTRPL*A 152
Score = 107 bits (228), Expect = 3e-022
Identities = 50/79 (63%), Positives = 55/79 (69%)
Frame = +2 / +3
Query: 344 QRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIPTLSSG 523
Q GLV RP A PQ AFLGIG+SS E G TR+ NC P+YCLAQ SDL FHIPTLSS
Sbjct: 156 QSGLVLRPLALPQRRAFLGIGYSSLREVEGVYTRKYNCCPKYCLAQNSDLRFHIPTLSSA 335
Query: 524 M*IAVHD*GYTCNVYRAMA 580
+ IAVH+ GYT V R A
Sbjct: 336 INIAVHELGYT*TVQRFTA 392
>gb|AY081335.1| Arabidopsis thaliana pectinesterase-like protein (At4g22010) mRNA,
complete cds
Length = 1980
Score = 154 bits (331), Expect = 2e-036
Identities = 58/80 (72%), Positives = 71/80 (88%)
Frame = -1 / +1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A++R T+QVYP++WTAIY+ LDNVGMWN+RSE+WARQYLGQQFYLRVY+ + S+RDE P
Sbjct: 1492 DAVSRSTVQVYPRAWTAIYIALDNVGMWNIRSENWARQYLGQQFYLRVYTSSTSYRDEYP 1671
Query: 402 IPKNALLCGRASGRRTRPL* 343
PKNAL+CGRA GR TRP *
Sbjct: 1672 PPKNALMCGRAKGRHTRPF* 1731
Score = 108 bits (230), Expect = 2e-022
Identities = 51/77 (66%), Positives = 55/77 (71%)
Frame = +2 / -2
Query: 350 GLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIPTLSSGM* 529
GLV RP ARP AF G G+SSR+E *TRR*NC P+YCLAQ SDL FHIPTLS+ M*
Sbjct: 1724 GLVWRPLARPHIRAFFGGGYSSRYEVEEV*TRR*NCCPKYCLAQFSDLMFHIPTLSNAM* 1545
Query: 530 IAVHD*GYTCNVYRAMA 580
IAVH GYT V R A
Sbjct: 1544 IAVHALGYT*TVDRETA 1494
>emb|AX507059.1| Sequence 1754 from Patent WO0216655
Length = 1626
Score = 154 bits (331), Expect = 2e-036
Identities = 58/80 (72%), Positives = 71/80 (88%)
Frame = -1 / +1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A++R T+QVYP++WTAIY+ LDNVGMWN+RSE+WARQYLGQQFYLRVY+ + S+RDE P
Sbjct: 1387 DAVSRSTVQVYPRAWTAIYIALDNVGMWNIRSENWARQYLGQQFYLRVYTSSTSYRDEYP 1566
Query: 402 IPKNALLCGRASGRRTRPL* 343
PKNAL+CGRA GR TRP *
Sbjct: 1567 PPKNALMCGRAKGRHTRPF* 1626
Score = 108 bits (230), Expect = 2e-022
Identities = 51/77 (66%), Positives = 55/77 (71%)
Frame = +2 / -2
Query: 350 GLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIPTLSSGM* 529
GLV RP ARP AF G G+SSR+E *TRR*NC P+YCLAQ SDL FHIPTLS+ M*
Sbjct: 1619 GLVWRPLARPHIRAFFGGGYSSRYEVEEV*TRR*NCCPKYCLAQFSDLMFHIPTLSNAM* 1440
Query: 530 IAVHD*GYTCNVYRAMA 580
IAVH GYT V R A
Sbjct: 1439 IAVHALGYT*TVDRETA 1389
>gb|BT008899.1| Arabidopsis thaliana At4g22010 mRNA, complete cds
Length = 1626
Score = 154 bits (331), Expect = 2e-036
Identities = 58/80 (72%), Positives = 71/80 (88%)
Frame = -1 / +1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A++R T+QVYP++WTAIY+ LDNVGMWN+RSE+WARQYLGQQFYLRVY+ + S+RDE P
Sbjct: 1387 DAVSRSTVQVYPRAWTAIYIALDNVGMWNIRSENWARQYLGQQFYLRVYTSSTSYRDEYP 1566
Query: 402 IPKNALLCGRASGRRTRPL* 343
PKNAL+CGRA GR TRP *
Sbjct: 1567 PPKNALMCGRAKGRHTRPF* 1626
Score = 108 bits (230), Expect = 2e-022
Identities = 51/77 (66%), Positives = 55/77 (71%)
Frame = +2 / -2
Query: 350 GLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIPTLSSGM* 529
GLV RP ARP AF G G+SSR+E *TRR*NC P+YCLAQ SDL FHIPTLS+ M*
Sbjct: 1619 GLVWRPLARPHIRAFFGGGYSSRYEVEEV*TRR*NCCPKYCLAQFSDLMFHIPTLSNAM* 1440
Query: 530 IAVHD*GYTCNVYRAMA 580
IAVH GYT V R A
Sbjct: 1439 IAVHALGYT*TVDRETA 1389
>emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long arm
Length = 14497843
Score = 154 bits (331), Expect = 2e-036
Identities = 58/80 (72%), Positives = 71/80 (88%)
Frame = -1 / +1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A++R T+QVYP++WTAIY+ LDNVGMWN+RSE+WARQYLGQQFYLRVY+ + S+RDE P
Sbjct: 7578991 DAVSRSTVQVYPRAWTAIYIALDNVGMWNIRSENWARQYLGQQFYLRVYTSSTSYRDEYP 7579170
Query: 402 IPKNALLCGRASGRRTRPL* 343
PKNAL+CGRA GR TRP *
Sbjct: 7579171 PPKNALMCGRAKGRHTRPF* 7579230
Score = 139 bits (299), Expect = 5e-032
Identities = 54/73 (73%), Positives = 62/73 (84%)
Frame = -1 / +2
Query: 567 YTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNA 388
+ L VYP+SWTA+Y+ LDNVGMWN+RSE WARQYLGQQFYLRVYSP +S RDE +PKNA
Sbjct: 13897742 WLL*VYPESWTAVYVALDNVGMWNLRSEYWARQYLGQQFYLRVYSPTHSLRDEYLLPKNA 13897921
Query: 387 LLCGRASGRRTRP 349
LLCGRAS + T P
Sbjct: 13897922 LLCGRASNKHTTP 13897960
Score = 132 bits (282), Expect = 1e-029
Identities = 50/69 (72%), Positives = 61/69 (88%)
Frame = -1 / -2
Query: 567 YTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNA 388
+ L VYP+SWTA+Y+ LDNVGMWN+RS+ WARQYLGQQFYLRV+SP +S +DE P+PKNA
Sbjct: 9874893 WLL*VYPKSWTAVYVALDNVGMWNLRSQFWARQYLGQQFYLRVHSPNHSPKDEYPLPKNA 9874714
Query: 387 LLCGRASGR 361
LLCGRAS +
Sbjct: 9874713 LLCGRASNK 9874687
Score = 108 bits (230), Expect = 2e-022
Identities = 51/77 (66%), Positives = 55/77 (71%)
Frame = +2 / -3
Query: 350 GLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIPTLSSGM* 529
GLV RP ARP AF G G+SSR+E *TRR*NC P+YCLAQ SDL FHIPTLS+ M*
Sbjct: 7579223 GLVWRPLARPHIRAFFGGGYSSRYEVEEV*TRR*NCCPKYCLAQFSDLMFHIPTLSNAM* 7579044
Query: 530 IAVHD*GYTCNVYRAMA 580
IAVH GYT V R A
Sbjct: 7579043 IAVHALGYT*TVDRETA 7578993
>emb|AL022140.1|ATF1N20 Arabidopsis thaliana DNA chromosome 4, BAC clone F1N20 (ESSA project)
Length = 103270
Score = 154 bits (331), Expect = 2e-036
Identities = 58/80 (72%), Positives = 71/80 (88%)
Frame = -1 / +3
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A++R T+QVYP++WTAIY+ LDNVGMWN+RSE+WARQYLGQQFYLRVY+ + S+RDE P
Sbjct: 39858 DAVSRSTVQVYPRAWTAIYIALDNVGMWNIRSENWARQYLGQQFYLRVYTSSTSYRDEYP 40037
Query: 402 IPKNALLCGRASGRRTRPL* 343
PKNAL+CGRA GR TRP *
Sbjct: 40038 PPKNALMCGRAKGRHTRPF* 40097
Score = 108 bits (230), Expect = 2e-022
Identities = 51/77 (66%), Positives = 55/77 (71%)
Frame = +2 / -1
Query: 350 GLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIPTLSSGM* 529
GLV RP ARP AF G G+SSR+E *TRR*NC P+YCLAQ SDL FHIPTLS+ M*
Sbjct: 40090 GLVWRPLARPHIRAFFGGGYSSRYEVEEV*TRR*NCCPKYCLAQFSDLMFHIPTLSNAM* 39911
Query: 530 IAVHD*GYTCNVYRAMA 580
IAVH GYT V R A
Sbjct: 39910 IAVHALGYT*TVDRETA 39860
>emb|AL161556.2|ATCHRIV56 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 56
Length = 196247
Score = 154 bits (331), Expect = 2e-036
Identities = 58/80 (72%), Positives = 71/80 (88%)
Frame = -1 / +1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A++R T+QVYP++WTAIY+ LDNVGMWN+RSE+WARQYLGQQFYLRVY+ + S+RDE P
Sbjct: 94177 DAVSRSTVQVYPRAWTAIYIALDNVGMWNIRSENWARQYLGQQFYLRVYTSSTSYRDEYP 94356
Query: 402 IPKNALLCGRASGRRTRPL* 343
PKNAL+CGRA GR TRP *
Sbjct: 94357 PPKNALMCGRAKGRHTRPF* 94416
Score = 108 bits (230), Expect = 2e-022
Identities = 51/77 (66%), Positives = 55/77 (71%)
Frame = +2 / -1
Query: 350 GLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIPTLSSGM* 529
GLV RP ARP AF G G+SSR+E *TRR*NC P+YCLAQ SDL FHIPTLS+ M*
Sbjct: 94409 GLVWRPLARPHIRAFFGGGYSSRYEVEEV*TRR*NCCPKYCLAQFSDLMFHIPTLSNAM* 94230
Query: 530 IAVHD*GYTCNVYRAMA 580
IAVH GYT V R A
Sbjct: 94229 IAVHALGYT*TVDRETA 94179
>ref|NM_118322.3| Arabidopsis thaliana SKS4; copper ion binding AT4G22010 (SKS4) mRNA,
complete cds
Length = 1983
Score = 154 bits (331), Expect = 2e-036
Identities = 58/80 (72%), Positives = 71/80 (88%)
Frame = -1 / +1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A++R T+QVYP++WTAIY+ LDNVGMWN+RSE+WARQYLGQQFYLRVY+ + S+RDE P
Sbjct: 1492 DAVSRSTVQVYPRAWTAIYIALDNVGMWNIRSENWARQYLGQQFYLRVYTSSTSYRDEYP 1671
Query: 402 IPKNALLCGRASGRRTRPL* 343
PKNAL+CGRA GR TRP *
Sbjct: 1672 PPKNALMCGRAKGRHTRPF* 1731
Score = 108 bits (230), Expect = 2e-022
Identities = 51/77 (66%), Positives = 55/77 (71%)
Frame = +2 / -2
Query: 350 GLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIPTLSSGM* 529
GLV RP ARP AF G G+SSR+E *TRR*NC P+YCLAQ SDL FHIPTLS+ M*
Sbjct: 1724 GLVWRPLARPHIRAFFGGGYSSRYEVEEV*TRR*NCCPKYCLAQFSDLMFHIPTLSNAM* 1545
Query: 530 IAVHD*GYTCNVYRAMA 580
IAVH GYT V R A
Sbjct: 1544 IAVHALGYT*TVDRETA 1494
>ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complete sequence
Length = 18585042
Score = 154 bits (331), Expect = 2e-036
Identities = 58/80 (72%), Positives = 71/80 (88%)
Frame = -1 / +1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A++R T+QVYP++WTAIY+ LDNVGMWN+RSE+WARQYLGQQFYLRVY+ + S+RDE P
Sbjct: 11666236 DAVSRSTVQVYPRAWTAIYIALDNVGMWNIRSENWARQYLGQQFYLRVYTSSTSYRDEYP 11666415
Query: 402 IPKNALLCGRASGRRTRPL* 343
PKNAL+CGRA GR TRP *
Sbjct: 11666416 PPKNALMCGRAKGRHTRPF* 11666475
Score = 139 bits (299), Expect = 5e-032
Identities = 54/73 (73%), Positives = 62/73 (84%)
Frame = -1 / +3
Query: 567 YTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNA 388
+ L VYP+SWTA+Y+ LDNVGMWN+RSE WARQYLGQQFYLRVYSP +S RDE +PKNA
Sbjct: 17984946 WLL*VYPESWTAVYVALDNVGMWNLRSEYWARQYLGQQFYLRVYSPTHSLRDEYLLPKNA 17985125
Query: 387 LLCGRASGRRTRP 349
LLCGRAS + T P
Sbjct: 17985126 LLCGRASNKHTTP 17985164
Score = 132 bits (282), Expect = 1e-029
Identities = 50/69 (72%), Positives = 61/69 (88%)
Frame = -1 / -3
Query: 567 YTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNA 388
+ L VYP+SWTA+Y+ LDNVGMWN+RS+ WARQYLGQQFYLRV+SP +S +DE P+PKNA
Sbjct: 13962124 WLL*VYPKSWTAVYVALDNVGMWNLRSQFWARQYLGQQFYLRVHSPNHSPKDEYPLPKNA 13961945
Query: 387 LLCGRASGR 361
LLCGRAS +
Sbjct: 13961944 LLCGRASNK 13961918
Score = 108 bits (230), Expect = 2e-022
Identities = 51/77 (66%), Positives = 55/77 (71%)
Frame = +2 / -2
Query: 350 GLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIPTLSSGM* 529
GLV RP ARP AF G G+SSR+E *TRR*NC P+YCLAQ SDL FHIPTLS+ M*
Sbjct: 11666468 GLVWRPLARPHIRAFFGGGYSSRYEVEEV*TRR*NCCPKYCLAQFSDLMFHIPTLSNAM* 11666289
Query: 530 IAVHD*GYTCNVYRAMA 580
IAVH GYT V R A
Sbjct: 11666288 IAVHALGYT*TVDRETA 11666238
>gb|AV807347.1|AV807347 AV807347 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-50-A13 3',
mRNA sequence
Length = 440
Score = 150 bits (323), Expect = 3e-035
Identities = 60/75 (80%), Positives = 66/75 (88%)
Frame = -1 / -2
Query: 564 TLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNAL 385
T+QVYP SWTAI + LDNVGMWN+RSE WARQYLGQQ YLRVY+P+ S RDE PIPKNAL
Sbjct: 439 TVQVYPSSWTAILIALDNVGMWNLRSEFWARQYLGQQLYLRVYTPSTSLRDEYPIPKNAL 260
Query: 384 LCGRASGRRTRPL*S 340
LCGRASGR TRPL*+
Sbjct: 259 LCGRASGRSTRPL*A 215
Score = 105 bits (223), Expect = 2e-021
Identities = 47/71 (66%), Positives = 52/71 (73%)
Frame = +2 / +3
Query: 344 QRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIPTLSSG 523
Q GLV RP A PQ AFLGIG+SS E G TR+ NC P+YCLAQ SDL FHIPTLSS
Sbjct: 219 QSGLVLRPLALPQRRAFLGIGYSSLREVEGVYTRKYNCCPKYCLAQNSDLRFHIPTLSSA 398
Query: 524 M*IAVHD*GYT 556
+ IAVH+ GYT
Sbjct: 399 INIAVHELGYT 431
>gb|AC009978.3|AC009978 Genomic sequence for Arabidopsis thaliana BAC T23E18 from chromosome I,
complete sequence
Length = 97554
Score = 150 bits (322), Expect = 4e-035
Identities = 60/81 (74%), Positives = 67/81 (82%)
Frame = -1 / -2
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
N + +QVYP SWTAI + LDNVGMWN+RSE WARQYLGQQ YLRVY+P+ S RDE P
Sbjct: 34628 NRLINIHIQVYPSSWTAILIALDNVGMWNLRSEFWARQYLGQQLYLRVYTPSTSLRDEYP 34449
Query: 402 IPKNALLCGRASGRRTRPL*S 340
IPKNALLCGRASGR TRPL*+
Sbjct: 34448 IPKNALLCGRASGRSTRPL*A 34386
Score = 109 bits (232), Expect = 9e-023
Identities = 48/72 (66%), Positives = 53/72 (73%)
Frame = +2 / +1
Query: 344 QRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIPTLSSG 523
Q GLV RP A PQ AFLGIG+SS E G TR+ NC P+YCLAQ SDL FHIPTLSS
Sbjct: 34390 QSGLVLRPLALPQRRAFLGIGYSSLREVEGVYTRKYNCCPKYCLAQNSDLRFHIPTLSSA 34569
Query: 524 M*IAVHD*GYTC 559
+ IAVH+ GYTC
Sbjct: 34570 INIAVHELGYTC 34605
>gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom arm complete sequence
Length = 14668883
Score = 150 bits (322), Expect = 4e-035
Identities = 60/81 (74%), Positives = 67/81 (82%)
Frame = -1 / -2
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
N + +QVYP SWTAI + LDNVGMWN+RSE WARQYLGQQ YLRVY+P+ S RDE P
Sbjct: 12819664 NRLINIHIQVYPSSWTAILIALDNVGMWNLRSEFWARQYLGQQLYLRVYTPSTSLRDEYP 12819485
Query: 402 IPKNALLCGRASGRRTRPL*S 340
IPKNALLCGRASGR TRPL*+
Sbjct: 12819484 IPKNALLCGRASGRSTRPL*A 12819422
Score = 141 bits (302), Expect = 2e-032
Identities = 55/73 (75%), Positives = 63/73 (86%)
Frame = -1 / -3
Query: 561 LQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALL 382
+QVYP+SWTAIY+ LDNVGMWN+RSE WARQYLGQQ YLRV++ + S RDE PIPKN+ L
Sbjct: 90441 IQVYPKSWTAIYIALDNVGMWNLRSEFWARQYLGQQLYLRVFTSSTSLRDEYPIPKNSRL 90262
Query: 381 CGRASGRRTRPL* 343
CGRA GR TRPL*
Sbjct: 90261 CGRARGRHTRPL* 90223
Score = 109 bits (232), Expect = 9e-023
Identities = 48/72 (66%), Positives = 53/72 (73%)
Frame = +2 / +3
Query: 344 QRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIPTLSSG 523
Q GLV RP A PQ AFLGIG+SS E G TR+ NC P+YCLAQ SDL FHIPTLSS
Sbjct: 12819426 QSGLVLRPLALPQRRAFLGIGYSSLREVEGVYTRKYNCCPKYCLAQNSDLRFHIPTLSSA 12819605
Query: 524 M*IAVHD*GYTC 559
+ IAVH+ GYTC
Sbjct: 12819606 INIAVHELGYTC 12819641
Score = 105 bits (223), Expect = 2e-021
Identities = 40/73 (54%), Positives = 53/73 (72%)
Frame = -1 / -3
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A++R+T+QVYP+SW+AI + DN GMWN+RSE+ R+YLG+Q Y+ V SP S RDE
Sbjct: 5114151 DAVSRHTVQVYPKSWSAILLTFDNAGMWNIRSENLERKYLGEQLYVSVLSPEKSLRDEYN 5113972
Query: 402 IPKNALLCGRASG 364
IP N LCG G
Sbjct: 5113971 IPLNTNLCGIVKG 5113933
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 150 bits (322), Expect = 4e-035
Identities = 60/81 (74%), Positives = 67/81 (82%)
Frame = -1 / -2
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
N + +QVYP SWTAI + LDNVGMWN+RSE WARQYLGQQ YLRVY+P+ S RDE P
Sbjct: 28583344 NRLINIHIQVYPSSWTAILIALDNVGMWNLRSEFWARQYLGQQLYLRVYTPSTSLRDEYP 28583165
Query: 402 IPKNALLCGRASGRRTRPL*S 340
IPKNALLCGRASGR TRPL*+
Sbjct: 28583164 IPKNALLCGRASGRSTRPL*A 28583102
Score = 141 bits (302), Expect = 2e-032
Identities = 55/73 (75%), Positives = 63/73 (86%)
Frame = -1 / -1
Query: 561 LQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALL 382
+QVYP+SWTAIY+ LDNVGMWN+RSE WARQYLGQQ YLRV++ + S RDE PIPKN+ L
Sbjct: 15606551 IQVYPKSWTAIYIALDNVGMWNLRSEFWARQYLGQQLYLRVFTSSTSLRDEYPIPKNSRL 15606372
Query: 381 CGRASGRRTRPL* 343
CGRA GR TRPL*
Sbjct: 15606371 CGRARGRHTRPL* 15606333
Score = 136 bits (291), Expect = 7e-031
Identities = 52/69 (75%), Positives = 60/69 (86%)
Frame = -1 / -2
Query: 561 LQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALL 382
+QVYP+SWTAIY+ LDNVGMWN+RSE W RQYLGQQFY+RVY+P+ S RDE IPKNALL
Sbjct: 7668040 VQVYPRSWTAIYVSLDNVGMWNLRSELWERQYLGQQFYMRVYTPSTSLRDEYLIPKNALL 7667861
Query: 381 CGRASGRRT 355
CGRA+G T
Sbjct: 7667860 CGRATGHHT 7667834
Score = 126 bits (269), Expect = 7e-028
Identities = 49/63 (77%), Positives = 55/63 (87%)
Frame = -1 / -2
Query: 555 VYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALLCG 376
VYP+SWTAIY+ LDNVGMWN+RSE W RQYLGQQFY+RVY+ + S RDE IPKNALLCG
Sbjct: 7671220 VYPRSWTAIYIALDNVGMWNMRSEIWERQYLGQQFYMRVYTTSTSLRDEYLIPKNALLCG 7671041
Query: 375 RAS 367
RAS
Sbjct: 7671040 RAS 7671032
Score = 109 bits (232), Expect = 9e-023
Identities = 48/72 (66%), Positives = 53/72 (73%)
Frame = +2 / +3
Query: 344 QRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIPTLSSG 523
Q GLV RP A PQ AFLGIG+SS E G TR+ NC P+YCLAQ SDL FHIPTLSS
Sbjct: 28583106 QSGLVLRPLALPQRRAFLGIGYSSLREVEGVYTRKYNCCPKYCLAQNSDLRFHIPTLSSA 28583285
Query: 524 M*IAVHD*GYTC 559
+ IAVH+ GYTC
Sbjct: 28583286 INIAVHELGYTC 28583321
Score = 105 bits (223), Expect = 2e-021
Identities = 40/73 (54%), Positives = 53/73 (72%)
Frame = -1 / -1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A++R+T+QVYP+SW+AI + DN GMWN+RSE+ R+YLG+Q Y+ V SP S RDE
Sbjct: 20758385 DAVSRHTVQVYPKSWSAILLTFDNAGMWNIRSENLERKYLGEQLYVSVLSPEKSLRDEYN 20758206
Query: 402 IPKNALLCGRASG 364
IP N LCG G
Sbjct: 20758205 IPLNTNLCGIVKG 20758167
>gb|BP790694.1|BP790694 BP790694 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-44-F23 3',
mRNA sequence
Length = 438
Score = 149 bits (321), Expect = 5e-035
Identities = 58/78 (74%), Positives = 67/78 (85%)
Frame = -1 / -2
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+AI+R T QVYP+SWTA+Y+ LDNVGMWN+RSE WARQYLGQQFYLRVYSP +S RDE
Sbjct: 407 DAISRSTTQVYPESWTAVYLALDNVGMWNLRSEYWARQYLGQQFYLRVYSPTHSLRDEYL 228
Query: 402 IPKNALLCGRASGRRTRP 349
+PKNALLCGRAS + T P
Sbjct: 227 LPKNALLCGRASNKHTTP 174
>gb|CD530290.1|CD530290 05J01 Arabidopsis Leaf Senescence Library Arabidopsis thaliana cDNA
3', mRNA sequence
Length = 538
Score = 149 bits (320), Expect = 7e-035
Identities = 58/78 (74%), Positives = 67/78 (85%)
Frame = -1 / +3
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+AI+R T QVYP+SWTA+Y+ LDNVGMWN+RSE WARQYLGQQFYLRVYSP +S RDE
Sbjct: 180 DAISRSTTQVYPESWTAVYVALDNVGMWNLRSEYWARQYLGQQFYLRVYSPTHSLRDEYL 359
Query: 402 IPKNALLCGRASGRRTRP 349
+PKNALLCGRAS + T P
Sbjct: 360 LPKNALLCGRASNKHTTP 413
>gb|AV544145.1|AV544145 AV544145 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ34e12F 3', mRNA sequence
Length = 619
Score = 149 bits (320), Expect = 7e-035
Identities = 57/80 (71%), Positives = 69/80 (86%)
Frame = -1 / -3
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A++R T+QVYP++WTAIY+ LDNVGMWN+RSE+WARQYLGQQFYLRVY+ + S RDE P
Sbjct: 323 DAVSRSTVQVYPRAWTAIYIALDNVGMWNIRSENWARQYLGQQFYLRVYTSSTSDRDEYP 144
Query: 402 IPKNALLCGRASGRRTRPL* 343
PKNAL+CGRA GR RP *
Sbjct: 143 PPKNALMCGRAKGRHNRPF* 84
Score = 105 bits (224), Expect = 1e-021
Identities = 50/77 (64%), Positives = 54/77 (70%)
Frame = +2 / +1
Query: 350 GLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIPTLSSGM* 529
GL+ RP ARP AF G G+SSR E *TRR*NC P+YCLAQ SDL FHIPTLS+ M*
Sbjct: 91 GLLWRPLARPHIRAFFGGGYSSRSEVEEV*TRR*NCCPKYCLAQFSDLMFHIPTLSNAM* 270
Query: 530 IAVHD*GYTCNVYRAMA 580
IAVH GYT V R A
Sbjct: 271 IAVHALGYT*TVDRETA 321
>gb|AV544367.1|AV544367 AV544367 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ41e01F 3', mRNA sequence
Length = 440
Score = 149 bits (320), Expect = 7e-035
Identities = 58/78 (74%), Positives = 67/78 (85%)
Frame = -1 / -1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+AI+R T QVYP+SWTA+Y+ LDNVGMWN+RSE WARQYLGQQFYLRVYSP +S RDE
Sbjct: 419 DAISRSTTQVYPESWTAVYVALDNVGMWNLRSEYWARQYLGQQFYLRVYSPTHSLRDEYL 240
Query: 402 IPKNALLCGRASGRRTRP 349
+PKNALLCGRAS + T P
Sbjct: 239 LPKNALLCGRASNKHTTP 186
>gb|AV546963.1|AV546963 AV546963 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZL22e02F 3', mRNA sequence
Length = 594
Score = 149 bits (320), Expect = 7e-035
Identities = 58/78 (74%), Positives = 67/78 (85%)
Frame = -1 / -1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+AI+R T QVYP+SWTA+Y+ LDNVGMWN+RSE WARQYLGQQFYLRVYSP +S RDE
Sbjct: 420 DAISRSTTQVYPESWTAVYVALDNVGMWNLRSEYWARQYLGQQFYLRVYSPTHSLRDEYL 241
Query: 402 IPKNALLCGRASGRRTRP 349
+PKNALLCGRAS + T P
Sbjct: 240 LPKNALLCGRASNKHTTP 187
>gb|CB254770.1|CB254770 60-E012994-019-004-H15-SP6r MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768H154Q 3-PRIME, mRNA sequence
Length = 615
Score = 149 bits (320), Expect = 7e-035
Identities = 58/78 (74%), Positives = 67/78 (85%)
Frame = -1 / -3
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+AI+R T QVYP+SWTA+Y+ LDNVGMWN+RSE WARQYLGQQFYLRVYSP +S RDE
Sbjct: 451 DAISRSTTQVYPESWTAVYVALDNVGMWNLRSEYWARQYLGQQFYLRVYSPTHSLRDEYL 272
Query: 402 IPKNALLCGRASGRRTRP 349
+PKNALLCGRAS + T P
Sbjct: 271 LPKNALLCGRASNKHTTP 218
>gb|AY072215.1| Arabidopsis thaliana putative pectinesterase (At4g38420) mRNA,
complete cds
Length = 1906
Score = 149 bits (320), Expect = 7e-035
Identities = 58/78 (74%), Positives = 67/78 (85%)
Frame = -1 / +1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+AI+R T QVYP+SWTA+Y+ LDNVGMWN+RSE WARQYLGQQFYLRVYSP +S RDE
Sbjct: 1480 DAISRSTTQVYPESWTAVYVALDNVGMWNLRSEYWARQYLGQQFYLRVYSPTHSLRDEYL 1659
Query: 402 IPKNALLCGRASGRRTRP 349
+PKNALLCGRAS + T P
Sbjct: 1660 LPKNALLCGRASNKHTTP 1713
>gb|AY096593.1| Arabidopsis thaliana putative pectinesterase (At4g38420) mRNA,
complete cds
Length = 1681
Score = 149 bits (320), Expect = 7e-035
Identities = 58/78 (74%), Positives = 67/78 (85%)
Frame = -1 / +1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+AI+R T QVYP+SWTA+Y+ LDNVGMWN+RSE WARQYLGQQFYLRVYSP +S RDE
Sbjct: 1414 DAISRSTTQVYPESWTAVYVALDNVGMWNLRSEYWARQYLGQQFYLRVYSPTHSLRDEYL 1593
Query: 402 IPKNALLCGRASGRRTRP 349
+PKNALLCGRAS + T P
Sbjct: 1594 LPKNALLCGRASNKHTTP 1647
>emb|AX507015.1| Sequence 1710 from Patent WO0216655
Length = 1647
Score = 149 bits (320), Expect = 7e-035
Identities = 58/78 (74%), Positives = 67/78 (85%)
Frame = -1 / +1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+AI+R T QVYP+SWTA+Y+ LDNVGMWN+RSE WARQYLGQQFYLRVYSP +S RDE
Sbjct: 1411 DAISRSTTQVYPESWTAVYVALDNVGMWNLRSEYWARQYLGQQFYLRVYSPTHSLRDEYL 1590
Query: 402 IPKNALLCGRASGRRTRP 349
+PKNALLCGRAS + T P
Sbjct: 1591 LPKNALLCGRASNKHTTP 1644
>ref|NM_120004.3| Arabidopsis thaliana SKS9; copper ion binding AT4G38420 (SKS9) mRNA,
complete cds
Length = 1899
Score = 149 bits (320), Expect = 7e-035
Identities = 58/78 (74%), Positives = 67/78 (85%)
Frame = -1 / +1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+AI+R T QVYP+SWTA+Y+ LDNVGMWN+RSE WARQYLGQQFYLRVYSP +S RDE
Sbjct: 1480 DAISRSTTQVYPESWTAVYVALDNVGMWNLRSEYWARQYLGQQFYLRVYSPTHSLRDEYL 1659
Query: 402 IPKNALLCGRASGRRTRP 349
+PKNALLCGRAS + T P
Sbjct: 1660 LPKNALLCGRASNKHTTP 1713
>gb|AI998955.1|AI998955 701547724 A. thaliana, Columbia Col-0, rosette-2 Arabidopsis
thaliana cDNA clone 701547724, mRNA sequence
Length = 632
Score = 148 bits (318), Expect = 1e-034
Identities = 58/80 (72%), Positives = 69/80 (86%)
Frame = -1 / -2
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A++R T+QVYP+SWTAIY+ LDNVGMWN+RSE WARQYLGQQ YLRV++ + S RDE P
Sbjct: 493 DAVSRSTVQVYPKSWTAIYIALDNVGMWNLRSEFWARQYLGQQLYLRVFTSSTSLRDEYP 314
Query: 402 IPKNALLCGRASGRRTRPL* 343
IPKN+ LCGRA GR TRPL*
Sbjct: 313 IPKNSRLCGRARGRHTRPL* 254
>gb|AV794098.1|AV794098 AV794098 RAFL8 Arabidopsis thaliana cDNA clone RAFL08-11-H23 3',
mRNA sequence
Length = 436
Score = 148 bits (318), Expect = 1e-034
Identities = 58/80 (72%), Positives = 69/80 (86%)
Frame = -1 / -2
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A++R T+QVYP+SWTAIY+ LDNVGMWN+RSE WARQYLGQQ YLRV++ + S RDE P
Sbjct: 435 DAVSRSTVQVYPKSWTAIYIALDNVGMWNLRSEFWARQYLGQQLYLRVFTSSTSLRDEYP 256
Query: 402 IPKNALLCGRASGRRTRPL* 343
IPKN+ LCGRA GR TRPL*
Sbjct: 255 IPKNSRLCGRARGRHTRPL* 196
>gb|CB261040.1|CB261040 39-E9570-012-004-M09-T7R MPIZ-ADIS-012 Arabidopsis thaliana cDNA
clone MPIZp769M094Q 5-PRIME, mRNA sequence
Length = 702
Score = 148 bits (318), Expect = 1e-034
Identities = 58/80 (72%), Positives = 69/80 (86%)
Frame = -1 / +1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A++R T+QVYP+SWTAIY+ LDNVGMWN+RSE WARQYLGQQ YLRV++ + S RDE P
Sbjct: 319 DAVSRSTVQVYPKSWTAIYIALDNVGMWNLRSEFWARQYLGQQLYLRVFTSSTSLRDEYP 498
Query: 402 IPKNALLCGRASGRRTRPL* 343
IPKN+ LCGRA GR TRPL*
Sbjct: 499 IPKNSRLCGRARGRHTRPL* 558
>gb|AV547447.1|AV547447 AV547447 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZL32b12F 3', mRNA sequence
Length = 569
Score = 148 bits (318), Expect = 1e-034
Identities = 58/80 (72%), Positives = 69/80 (86%)
Frame = -1 / -1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A++R T+QVYP+SWTAIY+ LDNVGMWN+RSE WARQYLGQQ YLRV++ + S RDE P
Sbjct: 422 DAVSRSTVQVYPKSWTAIYIALDNVGMWNLRSEFWARQYLGQQLYLRVFTSSTSLRDEYP 243
Query: 402 IPKNALLCGRASGRRTRPL* 343
IPKN+ LCGRA GR TRPL*
Sbjct: 242 IPKNSRLCGRARGRHTRPL* 183
>gb|AY059814.1| Arabidopsis thaliana Unknown protein mRNA, complete cds
Length = 1963
Score = 148 bits (318), Expect = 1e-034
Identities = 58/80 (72%), Positives = 69/80 (86%)
Frame = -1 / +3
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A++R T+QVYP+SWTAIY+ LDNVGMWN+RSE WARQYLGQQ YLRV++ + S RDE P
Sbjct: 1449 DAVSRSTVQVYPKSWTAIYIALDNVGMWNLRSEFWARQYLGQQLYLRVFTSSTSLRDEYP 1628
Query: 402 IPKNALLCGRASGRRTRPL* 343
IPKN+ LCGRA GR TRPL*
Sbjct: 1629 IPKNSRLCGRARGRHTRPL* 1688
>gb|AY128725.1| Arabidopsis thaliana unknown protein (At1g41830) mRNA, complete cds
Length = 1666
Score = 148 bits (318), Expect = 1e-034
Identities = 58/80 (72%), Positives = 69/80 (86%)
Frame = -1 / +1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A++R T+QVYP+SWTAIY+ LDNVGMWN+RSE WARQYLGQQ YLRV++ + S RDE P
Sbjct: 1390 DAVSRSTVQVYPKSWTAIYIALDNVGMWNLRSEFWARQYLGQQLYLRVFTSSTSLRDEYP 1569
Query: 402 IPKNALLCGRASGRRTRPL* 343
IPKN+ LCGRA GR TRPL*
Sbjct: 1570 IPKNSRLCGRARGRHTRPL* 1629
>emb|CQ805442.1| Sequence 1853 from Patent WO2004035798
Length = 1629
Score = 148 bits (318), Expect = 1e-034
Identities = 58/80 (72%), Positives = 69/80 (86%)
Frame = -1 / +1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A++R T+QVYP+SWTAIY+ LDNVGMWN+RSE WARQYLGQQ YLRV++ + S RDE P
Sbjct: 1390 DAVSRSTVQVYPKSWTAIYIALDNVGMWNLRSEFWARQYLGQQLYLRVFTSSTSLRDEYP 1569
Query: 402 IPKNALLCGRASGRRTRPL* 343
IPKN+ LCGRA GR TRPL*
Sbjct: 1570 IPKNSRLCGRARGRHTRPL* 1629
>ref|NM_103408.1| Arabidopsis thaliana SKS6; pectinesterase AT1G41830 (SKS6) mRNA,
complete cds
Length = 1963
Score = 148 bits (318), Expect = 1e-034
Identities = 58/80 (72%), Positives = 69/80 (86%)
Frame = -1 / +3
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A++R T+QVYP+SWTAIY+ LDNVGMWN+RSE WARQYLGQQ YLRV++ + S RDE P
Sbjct: 1449 DAVSRSTVQVYPKSWTAIYIALDNVGMWNLRSEFWARQYLGQQLYLRVFTSSTSLRDEYP 1628
Query: 402 IPKNALLCGRASGRRTRPL* 343
IPKN+ LCGRA GR TRPL*
Sbjct: 1629 IPKNSRLCGRARGRHTRPL* 1688
>gb|BP783865.1|BP783865 BP783865 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-88-G18 3',
mRNA sequence
Length = 434
Score = 148 bits (317), Expect = 2e-034
Identities = 59/73 (80%), Positives = 64/73 (87%)
Frame = -1 / -1
Query: 558 QVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALLC 379
QVYP SWTAI + LDNVGMWN+RSE WARQYLGQQ YLRVY+P+ S RDE PIPKNALLC
Sbjct: 434 QVYPSSWTAILIALDNVGMWNLRSEFWARQYLGQQLYLRVYTPSTSLRDEYPIPKNALLC 255
Query: 378 GRASGRRTRPL*S 340
GRASGR TRPL*+
Sbjct: 254 GRASGRSTRPL*A 216
Score = 105 bits (223), Expect = 2e-021
Identities = 47/71 (66%), Positives = 52/71 (73%)
Frame = +2 / +1
Query: 344 QRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIPTLSSG 523
Q GLV RP A PQ AFLGIG+SS E G TR+ NC P+YCLAQ SDL FHIPTLSS
Sbjct: 220 QSGLVLRPLALPQRRAFLGIGYSSLREVEGVYTRKYNCCPKYCLAQNSDLRFHIPTLSSA 399
Query: 524 M*IAVHD*GYT 556
+ IAVH+ GYT
Sbjct: 400 INIAVHELGYT 432
>gb|BP789378.1|BP789378 BP789378 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-38-I09 3',
mRNA sequence
Length = 414
Score = 146 bits (313), Expect = 6e-034
Identities = 57/78 (73%), Positives = 67/78 (85%)
Frame = -1 / -1
Query: 576 IARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIP 397
++R T+QVYP+SWTAIY+ LDNVGMWN+RSE WARQYLGQQ YLRV++ + S RDE PIP
Sbjct: 414 VSRSTVQVYPKSWTAIYIALDNVGMWNLRSEFWARQYLGQQLYLRVFTSSTSLRDEYPIP 235
Query: 396 KNALLCGRASGRRTRPL* 343
KN+ LCGRA GR TRPL*
Sbjct: 234 KNSRLCGRARGRHTRPL* 181
>gb|AV793285.1|AV793285 AV793285 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-18-N08 3',
mRNA sequence
Length = 446
Score = 145 bits (312), Expect = 9e-034
Identities = 58/72 (80%), Positives = 63/72 (87%)
Frame = -1 / -3
Query: 555 VYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALLCG 376
VYP SWTAI + LDNVGMWN+RSE WARQYLGQQ YLRVY+P+ S RDE PIPKNALLCG
Sbjct: 444 VYPSSWTAILIALDNVGMWNLRSEFWARQYLGQQLYLRVYTPSTSLRDEYPIPKNALLCG 265
Query: 375 RASGRRTRPL*S 340
RASGR TRPL*+
Sbjct: 264 RASGRSTRPL*A 229
Score = 105 bits (223), Expect = 2e-021
Identities = 47/71 (66%), Positives = 52/71 (73%)
Frame = +2 / +2
Query: 344 QRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIPTLSSG 523
Q GLV RP A PQ AFLGIG+SS E G TR+ NC P+YCLAQ SDL FHIPTLSS
Sbjct: 233 QSGLVLRPLALPQRRAFLGIGYSSLREVEGVYTRKYNCCPKYCLAQNSDLRFHIPTLSSA 412
Query: 524 M*IAVHD*GYT 556
+ IAVH+ GYT
Sbjct: 413 INIAVHELGYT 445
>ref|NM_102033.1| Arabidopsis thaliana SKS8; copper ion binding AT1G21850 (SKS8) mRNA,
complete cds
Length = 1656
Score = 144 bits (308), Expect = 3e-033
Identities = 55/76 (72%), Positives = 66/76 (86%)
Frame = -1 / +1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A++R T+QVYP+SWTAIY+ LDNVGMWN+RSE W RQYLGQQFY+RVY+P+ S RDE
Sbjct: 1387 DAVSRCTVQVYPRSWTAIYVSLDNVGMWNLRSELWERQYLGQQFYMRVYTPSTSLRDEYL 1566
Query: 402 IPKNALLCGRASGRRT 355
IPKNALLCGRA+G T
Sbjct: 1567 IPKNALLCGRATGHHT 1614
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 948,539,960
Number of Sequences: 1013581
Number of extensions: 10753406
Number of successful extensions: 126991
Number of sequences better than 1.0e-020: 191
length of database: 302,980,290
effective HSP length: 55
effective length of database: 247,233,335
effective search space used: 34859900235
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)