TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2576652.2.4
(870 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AV563979.1|AV563979 AV563979 Arabidopsis thaliana green ... 294 2e-078
gb|AY064032.1| Arabidopsis thaliana putative signal peptida... 294 2e-078
gb|AY096703.1| Arabidopsis thaliana putative signal peptida... 294 2e-078
gb|AY084305.1| Arabidopsis thaliana clone 103157 mRNA, comp... 294 2e-078
ref|NM_104138.2| Arabidopsis thaliana peptidase AT1G52600 m... 294 2e-078
dbj|AK220581.1| Arabidopsis thaliana mRNA for hypothetical ... 294 3e-078
gb|AV555801.1|AV555801 AV555801 Arabidopsis thaliana green ... 265 1e-069
gb|AV563247.1|AV563247 AV563247 Arabidopsis thaliana green ... 259 6e-068
gb|AY086118.1| Arabidopsis thaliana clone 21563 mRNA, compl... 259 9e-068
emb|BX826032.1|CNS0A69G Arabidopsis thaliana Full-length cD... 259 9e-068
gb|BT015149.1| Arabidopsis thaliana At3g15710 gene, complet... 259 9e-068
gb|BT015660.1| Arabidopsis thaliana At3g15710 gene, complet... 259 9e-068
ref|NM_112441.3| Arabidopsis thaliana peptidase AT3G15710 m... 259 9e-068
gb|AV537671.1|AV537671 AV537671 Arabidopsis thaliana roots ... 255 1e-066
gb|H76949.1|H76949 17380 Lambda-PRL2 Arabidopsis thaliana c... 239 7e-062
gb|AI994694.1|AI994694 701499287 A. thaliana, Ohio State cl... 236 1e-060
gb|R90653.1|R90653 17008 Lambda-PRL2 Arabidopsis thaliana c... 233 5e-060
gb|H76629.1|H76629 18334 Lambda-PRL2 Arabidopsis thaliana c... 205 3e-052
gb|BP611804.1|BP611804 BP611804 RAFL16 Arabidopsis thaliana... 124 3e-048
gb|H76216.1|H76216 17921 Lambda-PRL2 Arabidopsis thaliana c... 188 6e-047
dbj|AB017071.1| Arabidopsis thaliana genomic DNA, chromosom... 57 2e-043
gb|BP624442.1|BP624442 BP624442 RAFL17 Arabidopsis thaliana... 167 3e-040
gb|BP662042.1|BP662042 BP662042 RAFL21 Arabidopsis thaliana... 150 4e-035
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 57 7e-035
gb|AC008016.2|F6D8 Arabidopsis thaliana chromosome 1 BAC F6... 57 9e-035
gb|AV785811.1|AV785811 AV785811 RAFL6 Arabidopsis thaliana ... 86 2e-034
gb|AV549660.1|AV549660 AV549660 Arabidopsis thaliana roots ... 128 2e-028
gb|AV824350.1|AV824350 AV824350 RAFL6 Arabidopsis thaliana ... 86 1e-023
>gb|AV563979.1|AV563979 AV563979 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ197a01F 3', mRNA sequence
Length = 609
Score = 294 bits (637), Expect = 2e-078
Identities = 118/134 (88%), Positives = 129/134 (96%)
Frame = +3 / -3
Query: 3 APVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFNIDGREIPIVHRVIKVHERQDT 182
+PVVVVLSGSMEPGFKRGDILFLHMSKDPIR GEIVVFN+DGR+IPIVHRVIKVHER++T
Sbjct: 589 SPVVVVLSGSMEPGFKRGDILFLHMSKDPIRAGEIVVFNVDGRDIPIVHRVIKVHERENT 410
Query: 183 AEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWITIIMTEKPFIKYLL 362
EVD+LTKGDNN+GDDRLLYA GQLWL +HHIMGRAVG+LPYVGW+TIIMTEKP IKY+L
Sbjct: 409 GEVDVLTKGDNNYGDDRLLYAEGQLWLHRHHIMGRAVGFLPYVGWVTIIMTEKPIIKYIL 230
Query: 363 IGALGLLVITSKD* 404
IGALGLLVITSKD*
Sbjct: 229 IGALGLLVITSKD* 188
Score = 218 bits (471), Expect = 2e-055
Identities = 99/132 (75%), Positives = 108/132 (81%)
Frame = -3 / +3
Query: 400 SFDVMTSKPSAPISRYLINGFSVMIIVIQPTYGR*PTARPIM*CCWSQSCPCAYNSRSSP 221
SFDV+TSKP+AP+ YL+ GFSVMIIV PT G+ PTARPI+*C SQSCP AY S SSP
Sbjct: 192 SFDVITSKPNAPMRIYLMIGFSVMIIVTHPT*GKNPTARPII*CR*SQSCPSAYRSLSSP 371
Query: 220 KLLSPLVRMSTSAVS*RSWTLITRWTIGISRPSILKTTISPVRIGSLLICKNRISPLLNP 41
LLSP VR STS V S TL+TRWT+GISRPS LKTTISP RIGSLL+CKN ISPLL P
Sbjct: 372 *LLSPFVRTSTSPVFSLS*TLMTRWTMGISRPSTLKTTISPARIGSLLMCKNNISPLLKP 551
Query: 40 GSMLPERTTTTG 5
GSMLPERTTTTG
Sbjct: 552 GSMLPERTTTTG 587
Score = 140 bits (301), Expect = 5e-032
Identities = 57/128 (44%), Positives = 88/128 (68%)
Frame = -2 / +2
Query: 392 RYDQQAQCTNQQVLNKWFLSHDNCNPANIWKVAHSTSHNVMLLEPKLPMCI**SVIPKII 213
RY++ QCT + +L+ HDN +P+NI + ST+H +M ++PKL I SVI +I
Sbjct: 200 RYNE*TQCTYENILDDRLFCHDNSHPSNIRQEPDSTTHYMMSMKPKLSFSIQKSVISIVI 379
Query: 212 VTFGEDVHFCSVLTFMDLNYAVDNWNFTAIDIENNYFSCANRIFAHMQKQDITPFKSRFH 33
VTF +++F + F++LN +DN N T I+IENN F+C+NR+F H+Q+Q I P K+ FH
Sbjct: 380 VTFR*NINFSCIFPFVNLNDTMDNGNITTINIENNNFTCSNRVFTHVQEQYIPPLKTGFH 559
Query: 32 ATRENHYN 9
A+REN+++
Sbjct: 560 ASRENNHH 583
Score = 109 bits (233), Expect = 1e-022
Identities = 55/128 (42%), Positives = 75/128 (58%)
Frame = +2 / -2
Query: 20 SLW*HGTWI*KG*YPVFAYEQRSYSHRRNSCFQYRWP*NSNCPPRN*GP*TSGHCRSGHP 199
SLW HGT *+G Y V A+E R S R N CFQ W * S+CP +*G + RS
Sbjct: 572 SLWKHGTRF*EGGYIVLAHE*RPDSSR*NCCFQC*WS*YSHCPSCH*GSRKGKYRRS*CS 393
Query: 200 HQR*Q*FWG*PTIICTWAALAPATSHYGTCCGLPSICWLDYNYHD*ETIY*VPADWCTGL 379
++R*Q* W * T +C ALA +TS+ G+CC + ++CW+ YHD + + V + C G
Sbjct: 392 NER*Q*LWR*QTSVC*RTALASSTSYNGSCCRVLALCWMGDYYHDRKAYHQVYSHRCIGF 213
Query: 380 AGHNVERL 403
+NV+ L
Sbjct: 212 TRYNVKGL 189
>gb|AY064032.1| Arabidopsis thaliana putative signal peptidase subunit (At1g52600)
mRNA, complete cds
Length = 825
Score = 294 bits (637), Expect = 2e-078
Identities = 118/134 (88%), Positives = 129/134 (96%)
Frame = +3 / +3
Query: 3 APVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFNIDGREIPIVHRVIKVHERQDT 182
+PVVVVLSGSMEPGFKRGDILFLHMSKDPIR GEIVVFN+DGR+IPIVHRVIKVHER++T
Sbjct: 228 SPVVVVLSGSMEPGFKRGDILFLHMSKDPIRAGEIVVFNVDGRDIPIVHRVIKVHERENT 407
Query: 183 AEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWITIIMTEKPFIKYLL 362
EVD+LTKGDNN+GDDRLLYA GQLWL +HHIMGRAVG+LPYVGW+TIIMTEKP IKY+L
Sbjct: 408 GEVDVLTKGDNNYGDDRLLYAEGQLWLHRHHIMGRAVGFLPYVGWVTIIMTEKPIIKYIL 587
Query: 363 IGALGLLVITSKD* 404
IGALGLLVITSKD*
Sbjct: 588 IGALGLLVITSKD* 629
Score = 218 bits (471), Expect = 2e-055
Identities = 99/132 (75%), Positives = 108/132 (81%)
Frame = -3 / -3
Query: 400 SFDVMTSKPSAPISRYLINGFSVMIIVIQPTYGR*PTARPIM*CCWSQSCPCAYNSRSSP 221
SFDV+TSKP+AP+ YL+ GFSVMIIV PT G+ PTARPI+*C SQSCP AY S SSP
Sbjct: 625 SFDVITSKPNAPMRIYLMIGFSVMIIVTHPT*GKNPTARPII*CR*SQSCPSAYRSLSSP 446
Query: 220 KLLSPLVRMSTSAVS*RSWTLITRWTIGISRPSILKTTISPVRIGSLLICKNRISPLLNP 41
LLSP VR STS V S TL+TRWT+GISRPS LKTTISP RIGSLL+CKN ISPLL P
Sbjct: 445 *LLSPFVRTSTSPVFSLS*TLMTRWTMGISRPSTLKTTISPARIGSLLMCKNNISPLLKP 266
Query: 40 GSMLPERTTTTG 5
GSMLPERTTTTG
Sbjct: 265 GSMLPERTTTTG 230
Score = 140 bits (301), Expect = 5e-032
Identities = 57/128 (44%), Positives = 88/128 (68%)
Frame = -2 / -2
Query: 392 RYDQQAQCTNQQVLNKWFLSHDNCNPANIWKVAHSTSHNVMLLEPKLPMCI**SVIPKII 213
RY++ QCT + +L+ HDN +P+NI + ST+H +M ++PKL I SVI +I
Sbjct: 617 RYNE*TQCTYENILDDRLFCHDNSHPSNIRQEPDSTTHYMMSMKPKLSFSIQKSVISIVI 438
Query: 212 VTFGEDVHFCSVLTFMDLNYAVDNWNFTAIDIENNYFSCANRIFAHMQKQDITPFKSRFH 33
VTF +++F + F++LN +DN N T I+IENN F+C+NR+F H+Q+Q I P K+ FH
Sbjct: 437 VTFR*NINFSCIFPFVNLNDTMDNGNITTINIENNNFTCSNRVFTHVQEQYIPPLKTGFH 258
Query: 32 ATRENHYN 9
A+REN+++
Sbjct: 257 ASRENNHH 234
Score = 109 bits (233), Expect = 1e-022
Identities = 55/128 (42%), Positives = 75/128 (58%)
Frame = +2 / +2
Query: 20 SLW*HGTWI*KG*YPVFAYEQRSYSHRRNSCFQYRWP*NSNCPPRN*GP*TSGHCRSGHP 199
SLW HGT *+G Y V A+E R S R N CFQ W * S+CP +*G + RS
Sbjct: 245 SLWKHGTRF*EGGYIVLAHE*RPDSSR*NCCFQC*WS*YSHCPSCH*GSRKGKYRRS*CS 424
Query: 200 HQR*Q*FWG*PTIICTWAALAPATSHYGTCCGLPSICWLDYNYHD*ETIY*VPADWCTGL 379
++R*Q* W * T +C ALA +TS+ G+CC + ++CW+ YHD + + V + C G
Sbjct: 425 NER*Q*LWR*QTSVC*RTALASSTSYNGSCCRVLALCWMGDYYHDRKAYHQVYSHRCIGF 604
Query: 380 AGHNVERL 403
+NV+ L
Sbjct: 605 TRYNVKGL 628
>gb|AY096703.1| Arabidopsis thaliana putative signal peptidase subunit (At1g52600)
mRNA, complete cds
Length = 574
Score = 294 bits (637), Expect = 2e-078
Identities = 118/134 (88%), Positives = 129/134 (96%)
Frame = +3 / +1
Query: 3 APVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFNIDGREIPIVHRVIKVHERQDT 182
+PVVVVLSGSMEPGFKRGDILFLHMSKDPIR GEIVVFN+DGR+IPIVHRVIKVHER++T
Sbjct: 142 SPVVVVLSGSMEPGFKRGDILFLHMSKDPIRAGEIVVFNVDGRDIPIVHRVIKVHERENT 321
Query: 183 AEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWITIIMTEKPFIKYLL 362
EVD+LTKGDNN+GDDRLLYA GQLWL +HHIMGRAVG+LPYVGW+TIIMTEKP IKY+L
Sbjct: 322 GEVDVLTKGDNNYGDDRLLYAEGQLWLHRHHIMGRAVGFLPYVGWVTIIMTEKPIIKYIL 501
Query: 363 IGALGLLVITSKD* 404
IGALGLLVITSKD*
Sbjct: 502 IGALGLLVITSKD* 543
Score = 218 bits (471), Expect = 2e-055
Identities = 99/132 (75%), Positives = 108/132 (81%)
Frame = -3 / -3
Query: 400 SFDVMTSKPSAPISRYLINGFSVMIIVIQPTYGR*PTARPIM*CCWSQSCPCAYNSRSSP 221
SFDV+TSKP+AP+ YL+ GFSVMIIV PT G+ PTARPI+*C SQSCP AY S SSP
Sbjct: 539 SFDVITSKPNAPMRIYLMIGFSVMIIVTHPT*GKNPTARPII*CR*SQSCPSAYRSLSSP 360
Query: 220 KLLSPLVRMSTSAVS*RSWTLITRWTIGISRPSILKTTISPVRIGSLLICKNRISPLLNP 41
LLSP VR STS V S TL+TRWT+GISRPS LKTTISP RIGSLL+CKN ISPLL P
Sbjct: 359 *LLSPFVRTSTSPVFSLS*TLMTRWTMGISRPSTLKTTISPARIGSLLMCKNNISPLLKP 180
Query: 40 GSMLPERTTTTG 5
GSMLPERTTTTG
Sbjct: 179 GSMLPERTTTTG 144
Score = 140 bits (301), Expect = 5e-032
Identities = 57/128 (44%), Positives = 88/128 (68%)
Frame = -2 / -2
Query: 392 RYDQQAQCTNQQVLNKWFLSHDNCNPANIWKVAHSTSHNVMLLEPKLPMCI**SVIPKII 213
RY++ QCT + +L+ HDN +P+NI + ST+H +M ++PKL I SVI +I
Sbjct: 531 RYNE*TQCTYENILDDRLFCHDNSHPSNIRQEPDSTTHYMMSMKPKLSFSIQKSVISIVI 352
Query: 212 VTFGEDVHFCSVLTFMDLNYAVDNWNFTAIDIENNYFSCANRIFAHMQKQDITPFKSRFH 33
VTF +++F + F++LN +DN N T I+IENN F+C+NR+F H+Q+Q I P K+ FH
Sbjct: 351 VTFR*NINFSCIFPFVNLNDTMDNGNITTINIENNNFTCSNRVFTHVQEQYIPPLKTGFH 172
Query: 32 ATRENHYN 9
A+REN+++
Sbjct: 171 ASRENNHH 148
Score = 109 bits (233), Expect = 1e-022
Identities = 55/128 (42%), Positives = 75/128 (58%)
Frame = +2 / +3
Query: 20 SLW*HGTWI*KG*YPVFAYEQRSYSHRRNSCFQYRWP*NSNCPPRN*GP*TSGHCRSGHP 199
SLW HGT *+G Y V A+E R S R N CFQ W * S+CP +*G + RS
Sbjct: 159 SLWKHGTRF*EGGYIVLAHE*RPDSSR*NCCFQC*WS*YSHCPSCH*GSRKGKYRRS*CS 338
Query: 200 HQR*Q*FWG*PTIICTWAALAPATSHYGTCCGLPSICWLDYNYHD*ETIY*VPADWCTGL 379
++R*Q* W * T +C ALA +TS+ G+CC + ++CW+ YHD + + V + C G
Sbjct: 339 NER*Q*LWR*QTSVC*RTALASSTSYNGSCCRVLALCWMGDYYHDRKAYHQVYSHRCIGF 518
Query: 380 AGHNVERL 403
+NV+ L
Sbjct: 519 TRYNVKGL 542
>gb|AY084305.1| Arabidopsis thaliana clone 103157 mRNA, complete sequence
Length = 691
Score = 294 bits (637), Expect = 2e-078
Identities = 118/134 (88%), Positives = 129/134 (96%)
Frame = +3 / +3
Query: 3 APVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFNIDGREIPIVHRVIKVHERQDT 182
+PVVVVLSGSMEPGFKRGDILFLHMSKDPIR GEIVVFN+DGR+IPIVHRVIKVHER++T
Sbjct: 228 SPVVVVLSGSMEPGFKRGDILFLHMSKDPIRAGEIVVFNVDGRDIPIVHRVIKVHERENT 407
Query: 183 AEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWITIIMTEKPFIKYLL 362
EVD+LTKGDNN+GDDRLLYA GQLWL +HHIMGRAVG+LPYVGW+TIIMTEKP IKY+L
Sbjct: 408 GEVDVLTKGDNNYGDDRLLYAEGQLWLHRHHIMGRAVGFLPYVGWVTIIMTEKPIIKYIL 587
Query: 363 IGALGLLVITSKD* 404
IGALGLLVITSKD*
Sbjct: 588 IGALGLLVITSKD* 629
Score = 218 bits (471), Expect = 2e-055
Identities = 99/132 (75%), Positives = 108/132 (81%)
Frame = -3 / -1
Query: 400 SFDVMTSKPSAPISRYLINGFSVMIIVIQPTYGR*PTARPIM*CCWSQSCPCAYNSRSSP 221
SFDV+TSKP+AP+ YL+ GFSVMIIV PT G+ PTARPI+*C SQSCP AY S SSP
Sbjct: 625 SFDVITSKPNAPMRIYLMIGFSVMIIVTHPT*GKNPTARPII*CR*SQSCPSAYRSLSSP 446
Query: 220 KLLSPLVRMSTSAVS*RSWTLITRWTIGISRPSILKTTISPVRIGSLLICKNRISPLLNP 41
LLSP VR STS V S TL+TRWT+GISRPS LKTTISP RIGSLL+CKN ISPLL P
Sbjct: 445 *LLSPFVRTSTSPVFSLS*TLMTRWTMGISRPSTLKTTISPARIGSLLMCKNNISPLLKP 266
Query: 40 GSMLPERTTTTG 5
GSMLPERTTTTG
Sbjct: 265 GSMLPERTTTTG 230
Score = 140 bits (301), Expect = 5e-032
Identities = 57/128 (44%), Positives = 88/128 (68%)
Frame = -2 / -3
Query: 392 RYDQQAQCTNQQVLNKWFLSHDNCNPANIWKVAHSTSHNVMLLEPKLPMCI**SVIPKII 213
RY++ QCT + +L+ HDN +P+NI + ST+H +M ++PKL I SVI +I
Sbjct: 617 RYNE*TQCTYENILDDRLFCHDNSHPSNIRQEPDSTTHYMMSMKPKLSFSIQKSVISIVI 438
Query: 212 VTFGEDVHFCSVLTFMDLNYAVDNWNFTAIDIENNYFSCANRIFAHMQKQDITPFKSRFH 33
VTF +++F + F++LN +DN N T I+IENN F+C+NR+F H+Q+Q I P K+ FH
Sbjct: 437 VTFR*NINFSCIFPFVNLNDTMDNGNITTINIENNNFTCSNRVFTHVQEQYIPPLKTGFH 258
Query: 32 ATRENHYN 9
A+REN+++
Sbjct: 257 ASRENNHH 234
Score = 109 bits (233), Expect = 1e-022
Identities = 55/128 (42%), Positives = 75/128 (58%)
Frame = +2 / +2
Query: 20 SLW*HGTWI*KG*YPVFAYEQRSYSHRRNSCFQYRWP*NSNCPPRN*GP*TSGHCRSGHP 199
SLW HGT *+G Y V A+E R S R N CFQ W * S+CP +*G + RS
Sbjct: 245 SLWKHGTRF*EGGYIVLAHE*RPDSSR*NCCFQC*WS*YSHCPSCH*GSRKGKYRRS*CS 424
Query: 200 HQR*Q*FWG*PTIICTWAALAPATSHYGTCCGLPSICWLDYNYHD*ETIY*VPADWCTGL 379
++R*Q* W * T +C ALA +TS+ G+CC + ++CW+ YHD + + V + C G
Sbjct: 425 NER*Q*LWR*QTSVC*RTALASSTSYNGSCCRVLALCWMGDYYHDRKAYHQVYSHRCIGF 604
Query: 380 AGHNVERL 403
+NV+ L
Sbjct: 605 TRYNVKGL 628
>ref|NM_104138.2| Arabidopsis thaliana peptidase AT1G52600 mRNA, complete cds
Length = 818
Score = 294 bits (637), Expect = 2e-078
Identities = 118/134 (88%), Positives = 129/134 (96%)
Frame = +3 / +1
Query: 3 APVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFNIDGREIPIVHRVIKVHERQDT 182
+PVVVVLSGSMEPGFKRGDILFLHMSKDPIR GEIVVFN+DGR+IPIVHRVIKVHER++T
Sbjct: 229 SPVVVVLSGSMEPGFKRGDILFLHMSKDPIRAGEIVVFNVDGRDIPIVHRVIKVHERENT 408
Query: 183 AEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWITIIMTEKPFIKYLL 362
EVD+LTKGDNN+GDDRLLYA GQLWL +HHIMGRAVG+LPYVGW+TIIMTEKP IKY+L
Sbjct: 409 GEVDVLTKGDNNYGDDRLLYAEGQLWLHRHHIMGRAVGFLPYVGWVTIIMTEKPIIKYIL 588
Query: 363 IGALGLLVITSKD* 404
IGALGLLVITSKD*
Sbjct: 589 IGALGLLVITSKD* 630
Score = 218 bits (471), Expect = 2e-055
Identities = 99/132 (75%), Positives = 108/132 (81%)
Frame = -3 / -1
Query: 400 SFDVMTSKPSAPISRYLINGFSVMIIVIQPTYGR*PTARPIM*CCWSQSCPCAYNSRSSP 221
SFDV+TSKP+AP+ YL+ GFSVMIIV PT G+ PTARPI+*C SQSCP AY S SSP
Sbjct: 626 SFDVITSKPNAPMRIYLMIGFSVMIIVTHPT*GKNPTARPII*CR*SQSCPSAYRSLSSP 447
Query: 220 KLLSPLVRMSTSAVS*RSWTLITRWTIGISRPSILKTTISPVRIGSLLICKNRISPLLNP 41
LLSP VR STS V S TL+TRWT+GISRPS LKTTISP RIGSLL+CKN ISPLL P
Sbjct: 446 *LLSPFVRTSTSPVFSLS*TLMTRWTMGISRPSTLKTTISPARIGSLLMCKNNISPLLKP 267
Query: 40 GSMLPERTTTTG 5
GSMLPERTTTTG
Sbjct: 266 GSMLPERTTTTG 231
Score = 140 bits (301), Expect = 5e-032
Identities = 57/128 (44%), Positives = 88/128 (68%)
Frame = -2 / -3
Query: 392 RYDQQAQCTNQQVLNKWFLSHDNCNPANIWKVAHSTSHNVMLLEPKLPMCI**SVIPKII 213
RY++ QCT + +L+ HDN +P+NI + ST+H +M ++PKL I SVI +I
Sbjct: 618 RYNE*TQCTYENILDDRLFCHDNSHPSNIRQEPDSTTHYMMSMKPKLSFSIQKSVISIVI 439
Query: 212 VTFGEDVHFCSVLTFMDLNYAVDNWNFTAIDIENNYFSCANRIFAHMQKQDITPFKSRFH 33
VTF +++F + F++LN +DN N T I+IENN F+C+NR+F H+Q+Q I P K+ FH
Sbjct: 438 VTFR*NINFSCIFPFVNLNDTMDNGNITTINIENNNFTCSNRVFTHVQEQYIPPLKTGFH 259
Query: 32 ATRENHYN 9
A+REN+++
Sbjct: 258 ASRENNHH 235
Score = 109 bits (233), Expect = 1e-022
Identities = 55/128 (42%), Positives = 75/128 (58%)
Frame = +2 / +3
Query: 20 SLW*HGTWI*KG*YPVFAYEQRSYSHRRNSCFQYRWP*NSNCPPRN*GP*TSGHCRSGHP 199
SLW HGT *+G Y V A+E R S R N CFQ W * S+CP +*G + RS
Sbjct: 246 SLWKHGTRF*EGGYIVLAHE*RPDSSR*NCCFQC*WS*YSHCPSCH*GSRKGKYRRS*CS 425
Query: 200 HQR*Q*FWG*PTIICTWAALAPATSHYGTCCGLPSICWLDYNYHD*ETIY*VPADWCTGL 379
++R*Q* W * T +C ALA +TS+ G+CC + ++CW+ YHD + + V + C G
Sbjct: 426 NER*Q*LWR*QTSVC*RTALASSTSYNGSCCRVLALCWMGDYYHDRKAYHQVYSHRCIGF 605
Query: 380 AGHNVERL 403
+NV+ L
Sbjct: 606 TRYNVKGL 629
>dbj|AK220581.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds,
clone: RAFL16-87-D04
Length = 783
Score = 294 bits (636), Expect = 3e-078
Identities = 117/134 (87%), Positives = 129/134 (96%)
Frame = +3 / +3
Query: 3 APVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFNIDGREIPIVHRVIKVHERQDT 182
+PVVVVLSGSMEPGFKRGDILFLHMSKDP+R GEIVVFN+DGR+IPIVHRVIKVHER++T
Sbjct: 228 SPVVVVLSGSMEPGFKRGDILFLHMSKDPVRAGEIVVFNVDGRDIPIVHRVIKVHERENT 407
Query: 183 AEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWITIIMTEKPFIKYLL 362
EVD+LTKGDNN+GDDRLLYA GQLWL +HHIMGRAVG+LPYVGW+TIIMTEKP IKY+L
Sbjct: 408 GEVDVLTKGDNNYGDDRLLYAEGQLWLHRHHIMGRAVGFLPYVGWVTIIMTEKPIIKYIL 587
Query: 363 IGALGLLVITSKD* 404
IGALGLLVITSKD*
Sbjct: 588 IGALGLLVITSKD* 629
Score = 216 bits (466), Expect = 8e-055
Identities = 98/132 (74%), Positives = 107/132 (81%)
Frame = -3 / -3
Query: 400 SFDVMTSKPSAPISRYLINGFSVMIIVIQPTYGR*PTARPIM*CCWSQSCPCAYNSRSSP 221
SFDV+TSKP+AP+ YL+ GFSVMIIV PT G+ PTARPI+*C SQSCP AY S SSP
Sbjct: 625 SFDVITSKPNAPMRIYLMIGFSVMIIVTHPT*GKNPTARPII*CR*SQSCPSAYRSLSSP 446
Query: 220 KLLSPLVRMSTSAVS*RSWTLITRWTIGISRPSILKTTISPVRIGSLLICKNRISPLLNP 41
LLSP VR STS V S TL+TRWT+GISRPS LKTTISP R GSLL+CKN ISPLL P
Sbjct: 445 *LLSPFVRTSTSPVFSLS*TLMTRWTMGISRPSTLKTTISPARTGSLLMCKNNISPLLKP 266
Query: 40 GSMLPERTTTTG 5
GSMLPERTTTTG
Sbjct: 265 GSMLPERTTTTG 230
Score = 140 bits (301), Expect = 5e-032
Identities = 57/128 (44%), Positives = 88/128 (68%)
Frame = -2 / -2
Query: 392 RYDQQAQCTNQQVLNKWFLSHDNCNPANIWKVAHSTSHNVMLLEPKLPMCI**SVIPKII 213
RY++ QCT + +L+ HDN +P+NI + ST+H +M ++PKL I SVI +I
Sbjct: 617 RYNE*TQCTYENILDDRLFCHDNSHPSNIRQEPDSTTHYMMSMKPKLSFSIQKSVISIVI 438
Query: 212 VTFGEDVHFCSVLTFMDLNYAVDNWNFTAIDIENNYFSCANRIFAHMQKQDITPFKSRFH 33
VTF +++F + F++LN +DN N T I+IENN F+C+NR+F H+Q+Q I P K+ FH
Sbjct: 437 VTFR*NINFSCIFPFVNLNDTMDNGNITTINIENNNFTCSNRVFTHVQEQYIPPLKTGFH 258
Query: 32 ATRENHYN 9
A+REN+++
Sbjct: 257 ASRENNHH 234
Score = 109 bits (233), Expect = 1e-022
Identities = 55/128 (42%), Positives = 75/128 (58%)
Frame = +2 / +2
Query: 20 SLW*HGTWI*KG*YPVFAYEQRSYSHRRNSCFQYRWP*NSNCPPRN*GP*TSGHCRSGHP 199
SLW HGT *+G Y V A+E R S R N CFQ W * S+CP +*G + RS
Sbjct: 245 SLWKHGTRF*EGGYIVLAHE*RPGSSR*NCCFQC*WS*YSHCPSCH*GSRKGKYRRS*CS 424
Query: 200 HQR*Q*FWG*PTIICTWAALAPATSHYGTCCGLPSICWLDYNYHD*ETIY*VPADWCTGL 379
++R*Q* W * T +C ALA +TS+ G+CC + ++CW+ YHD + + V + C G
Sbjct: 425 NER*Q*LWR*QTSVC*RTALASSTSYNGSCCRVLALCWMGDYYHDRKAYHQVYSHRCIGF 604
Query: 380 AGHNVERL 403
+NV+ L
Sbjct: 605 TRYNVKGL 628
>gb|AV555801.1|AV555801 AV555801 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ026b05F 3', mRNA sequence
Length = 563
Score = 265 bits (573), Expect = 1e-069
Identities = 106/125 (84%), Positives = 118/125 (94%)
Frame = +3 / -1
Query: 30 SMEPGFKRGDILFLHMSKDPIRTGEIVVFNIDGREIPIVHRVIKVHERQDTAEVDILTKG 209
SMEPGFKRGDILFLHMSKDPIR GEIVVFN+DGR+IPIVHRVIKVHER++T EV++LTKG
Sbjct: 563 SMEPGFKRGDILFLHMSKDPIRAGEIVVFNVDGRDIPIVHRVIKVHERENTGEVNVLTKG 384
Query: 210 DNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWITIIMTEKPFIKYLLIGALGLLVI 389
NN+GD RLLYA GQLWL +HHIMGRAVG+LPYVGW+TIIMTEKP IKY+LIGALGLLVI
Sbjct: 383 ANNYGDVRLLYAEGQLWLHRHHIMGRAVGFLPYVGWVTIIMTEKPIIKYILIGALGLLVI 204
Query: 390 TSKD* 404
TSK+*
Sbjct: 203 TSKE* 189
Score = 191 bits (412), Expect = 2e-047
Identities = 87/123 (70%), Positives = 98/123 (79%)
Frame = -3 / +1
Query: 400 SFDVMTSKPSAPISRYLINGFSVMIIVIQPTYGR*PTARPIM*CCWSQSCPCAYNSRSSP 221
SFDV+TSKP+AP+ YL+ GFSVMIIV PT G+ PTARPI+*C SQSCP AY S +SP
Sbjct: 193 SFDVITSKPNAPMRIYLMIGFSVMIIVTHPT*GKNPTARPII*CR*SQSCPSAYRSLTSP 372
Query: 220 KLLSPLVRMSTSAVS*RSWTLITRWTIGISRPSILKTTISPVRIGSLLICKNRISPLLNP 41
LL+P VR TS V S TL+TRWT+GISRPS LKTTISP RIGSLL+CKN ISPLL P
Sbjct: 373 *LLAPFVRTLTSPVFSLS*TLMTRWTMGISRPSTLKTTISPARIGSLLMCKNNISPLLKP 552
Query: 40 GSM 32
GSM
Sbjct: 553 GSM 561
Score = 127 bits (272), Expect = 5e-028
Identities = 53/121 (43%), Positives = 80/121 (66%)
Frame = -2 / +3
Query: 392 RYDQQAQCTNQQVLNKWFLSHDNCNPANIWKVAHSTSHNVMLLEPKLPMCI**SVIPKII 213
RY++ QCT + +L+ HDN +P+NI + ST+H +M ++PKL I S I +I
Sbjct: 201 RYNE*TQCTYENILDDRLFCHDNSHPSNIRQEPDSTTHYMMSMKPKLSFSIQKSDISIVI 380
Query: 212 VTFGEDVHFCSVLTFMDLNYAVDNWNFTAIDIENNYFSCANRIFAHMQKQDITPFKSRFH 33
TF +++F + F++LN +DN N T I+IENN F+C+NR+F H+Q+Q I PFK+ FH
Sbjct: 381 GTFR*NINFSCIFPFVNLNDTMDNGNITTINIENNNFTCSNRVFTHVQEQYIPPFKTGFH 560
Query: 32 A 30
A
Sbjct: 561 A 563
>gb|AV563247.1|AV563247 AV563247 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ183h06F 3', mRNA sequence
Length = 543
Score = 259 bits (561), Expect = 6e-068
Identities = 103/118 (87%), Positives = 113/118 (95%)
Frame = +3 / -2
Query: 51 RGDILFLHMSKDPIRTGEIVVFNIDGREIPIVHRVIKVHERQDTAEVDILTKGDNNFGDD 230
RGDILFLHMSKDPIR GEIVVFN+DGR+IPIVHRVIKVHER++T EVD+LTKGDNN+GDD
Sbjct: 542 RGDILFLHMSKDPIRAGEIVVFNVDGRDIPIVHRVIKVHERENTGEVDVLTKGDNNYGDD 363
Query: 231 RLLYAHGQLWLQQHHIMGRAVGYLPYVGWITIIMTEKPFIKYLLIGALGLLVITSKD* 404
RLLYA GQLWL +HHIMGRAVG+LPYVGW+TIIMTEKP IKY+LIGALGLLVITSKD*
Sbjct: 362 RLLYAEGQLWLHRHHIMGRAVGFLPYVGWVTIIMTEKPIIKYILIGALGLLVITSKD* 189
Score = 185 bits (398), Expect = 2e-045
Identities = 85/117 (72%), Positives = 94/117 (80%)
Frame = -3 / +1
Query: 400 SFDVMTSKPSAPISRYLINGFSVMIIVIQPTYGR*PTARPIM*CCWSQSCPCAYNSRSSP 221
SFDV+TSKP+AP+ YL+ GFSVMIIV PT G+ PTARPI+*C SQSCP AY S SSP
Sbjct: 193 SFDVITSKPNAPMRIYLMIGFSVMIIVTHPT*GKNPTARPII*CR*SQSCPSAYRSLSSP 372
Query: 220 KLLSPLVRMSTSAVS*RSWTLITRWTIGISRPSILKTTISPVRIGSLLICKNRISPL 50
LLSP VR STS V S TL+TRWT+GISRPS LKTTISP RIGSLL+CKN ISPL
Sbjct: 373 *LLSPFVRTSTSPVFSLS*TLMTRWTMGISRPSTLKTTISPARIGSLLMCKNNISPL 543
Score = 121 bits (258), Expect = 4e-026
Identities = 50/114 (43%), Positives = 76/114 (66%)
Frame = -2 / +3
Query: 392 RYDQQAQCTNQQVLNKWFLSHDNCNPANIWKVAHSTSHNVMLLEPKLPMCI**SVIPKII 213
RY++ QCT + +L+ HDN +P+NI + ST+H +M ++PKL I SVI +I
Sbjct: 201 RYNE*TQCTYENILDDRLFCHDNSHPSNIRQEPDSTTHYMMSMKPKLSFSIQKSVISIVI 380
Query: 212 VTFGEDVHFCSVLTFMDLNYAVDNWNFTAIDIENNYFSCANRIFAHMQKQDITP 51
VTF +++F + F++LN +DN N T I+IENN F+C+NR+F H+Q+Q I P
Sbjct: 381 VTFR*NINFSCIFPFVNLNDTMDNGNITTINIENNNFTCSNRVFTHVQEQYIPP 542
>gb|AY086118.1| Arabidopsis thaliana clone 21563 mRNA, complete sequence
Length = 820
Score = 259 bits (560), Expect = 9e-068
Identities = 108/134 (80%), Positives = 119/134 (88%)
Frame = +3 / +1
Query: 3 APVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFNIDGREIPIVHRVIKVHERQDT 182
+PVVVVLS SMEPGF+RGDILFL M+ +PIR GEIVVF++DGREIPIVHR IKVHER DT
Sbjct: 265 SPVVVVLSESMEPGFQRGDILFLRMTDEPIRAGEIVVFSVDGREIPIVHRAIKVHERGDT 444
Query: 183 AEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWITIIMTEKPFIKYLL 362
VD+LTKGDNN DD LYA GQLWL +HHIMGRAVG+LPYVGW+TIIMTEKP IKY+L
Sbjct: 445 KAVDVLTKGDNNDIDDIGLYAEGQLWLHRHHIMGRAVGFLPYVGWVTIIMTEKPIIKYIL 624
Query: 363 IGALGLLVITSKD* 404
IGALGLLVITSKD*
Sbjct: 625 IGALGLLVITSKD* 666
Score = 182 bits (392), Expect = 1e-044
Identities = 89/133 (66%), Positives = 100/133 (75%)
Frame = -3 / -3
Query: 403 *SFDVMTSKPSAPISRYLINGFSVMIIVIQPTYGR*PTARPIM*CCWSQSCPCAYNSRSS 224
*SFDV+TSKP+AP+S YL+ GFSVMIIV PT G+ PTA P++*C SQSCP A SS
Sbjct: 665 *SFDVITSKPNAPMSIYLMIGFSVMIIVTHPT*GKNPTALPMI*CL*SQSCPSA*RPMSS 486
Query: 223 PKLLSPLVRMSTSAVS*RSWTLITRWTIGISRPSILKTTISPVRIGSLLICKNRISPLLN 44
LLSP VR ST+ VS S TLI R T+GISRPS L TTISP RIGS +I KN ISPL
Sbjct: 485 MSLLSPFVRTSTALVSPLS*TLIAR*TMGISRPSTLNTTISPARIGSSVIRKNNISPL*K 306
Query: 43 PGSMLPERTTTTG 5
PGS+L ERTTTTG
Sbjct: 305 PGSILSERTTTTG 267
Score = 137 bits (294), Expect = 4e-031
Identities = 55/138 (39%), Positives = 95/138 (68%)
Frame = -2 / -2
Query: 419 AKFDTLIFRRYDQQAQCTNQQVLNKWFLSHDNCNPANIWKVAHSTSHNVMLLEPKLPMCI 240
A + L+FR Y++Q QCTN+ +L+ HDN NP+NI + ++S++H++M ++PKL I
Sbjct: 681 ACYVVLVFRCYNEQTQCTNEYILDDRLFCHDNSNPSNIRQESNSSAHDMMPVKPKLSFSI 502
Query: 239 **SVIPKIIVTFGEDVHFCSVLTFMDLNYAVDNWNFTAIDIENNYFSCANRIFAHMQKQD 60
+VI I+VTF +++ S+ + M+ + +++N NFT I+ E+N +C+NR+ +H Q+Q
Sbjct: 501 ETNVINVIVVTFC*NINCFSISSLMNFDCSMNNGNFTTINTEHNNLACSNRLISHPQEQY 322
Query: 59 ITPFKSRFHATRENHYNW 6
I+ K+RFH REN+ +W
Sbjct: 321 ISSLKARFHTFRENNNHW 268
>emb|BX826032.1|CNS0A69G Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL80ZE04 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 855
Score = 259 bits (560), Expect = 9e-068
Identities = 108/134 (80%), Positives = 119/134 (88%)
Frame = +3 / +2
Query: 3 APVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFNIDGREIPIVHRVIKVHERQDT 182
+PVVVVLS SMEPGF+RGDILFL M+ +PIR GEIVVF++DGREIPIVHR IKVHER DT
Sbjct: 248 SPVVVVLSESMEPGFQRGDILFLRMTDEPIRAGEIVVFSVDGREIPIVHRAIKVHERGDT 427
Query: 183 AEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWITIIMTEKPFIKYLL 362
VD+LTKGDNN DD LYA GQLWL +HHIMGRAVG+LPYVGW+TIIMTEKP IKY+L
Sbjct: 428 KAVDVLTKGDNNDIDDIGLYAEGQLWLHRHHIMGRAVGFLPYVGWVTIIMTEKPIIKYIL 607
Query: 363 IGALGLLVITSKD* 404
IGALGLLVITSKD*
Sbjct: 608 IGALGLLVITSKD* 649
Score = 182 bits (392), Expect = 1e-044
Identities = 89/133 (66%), Positives = 100/133 (75%)
Frame = -3 / -1
Query: 403 *SFDVMTSKPSAPISRYLINGFSVMIIVIQPTYGR*PTARPIM*CCWSQSCPCAYNSRSS 224
*SFDV+TSKP+AP+S YL+ GFSVMIIV PT G+ PTA P++*C SQSCP A SS
Sbjct: 648 *SFDVITSKPNAPMSIYLMIGFSVMIIVTHPT*GKNPTALPMI*CL*SQSCPSA*RPMSS 469
Query: 223 PKLLSPLVRMSTSAVS*RSWTLITRWTIGISRPSILKTTISPVRIGSLLICKNRISPLLN 44
LLSP VR ST+ VS S TLI R T+GISRPS L TTISP RIGS +I KN ISPL
Sbjct: 468 MSLLSPFVRTSTALVSPLS*TLIAR*TMGISRPSTLNTTISPARIGSSVIRKNNISPL*K 289
Query: 43 PGSMLPERTTTTG 5
PGS+L ERTTTTG
Sbjct: 288 PGSILSERTTTTG 250
Score = 137 bits (294), Expect = 4e-031
Identities = 55/138 (39%), Positives = 95/138 (68%)
Frame = -2 / -3
Query: 419 AKFDTLIFRRYDQQAQCTNQQVLNKWFLSHDNCNPANIWKVAHSTSHNVMLLEPKLPMCI 240
A + L+FR Y++Q QCTN+ +L+ HDN NP+NI + ++S++H++M ++PKL I
Sbjct: 664 ACYVVLVFRCYNEQTQCTNEYILDDRLFCHDNSNPSNIRQESNSSAHDMMPVKPKLSFSI 485
Query: 239 **SVIPKIIVTFGEDVHFCSVLTFMDLNYAVDNWNFTAIDIENNYFSCANRIFAHMQKQD 60
+VI I+VTF +++ S+ + M+ + +++N NFT I+ E+N +C+NR+ +H Q+Q
Sbjct: 484 ETNVINVIVVTFC*NINCFSISSLMNFDCSMNNGNFTTINTEHNNLACSNRLISHPQEQY 305
Query: 59 ITPFKSRFHATRENHYNW 6
I+ K+RFH REN+ +W
Sbjct: 304 ISSLKARFHTFRENNNHW 251
>gb|BT015149.1| Arabidopsis thaliana At3g15710 gene, complete cds
Length = 805
Score = 259 bits (560), Expect = 9e-068
Identities = 108/134 (80%), Positives = 119/134 (88%)
Frame = +3 / +3
Query: 3 APVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFNIDGREIPIVHRVIKVHERQDT 182
+PVVVVLS SMEPGF+RGDILFL M+ +PIR GEIVVF++DGREIPIVHR IKVHER DT
Sbjct: 225 SPVVVVLSESMEPGFQRGDILFLRMTDEPIRAGEIVVFSVDGREIPIVHRAIKVHERGDT 404
Query: 183 AEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWITIIMTEKPFIKYLL 362
VD+LTKGDNN DD LYA GQLWL +HHIMGRAVG+LPYVGW+TIIMTEKP IKY+L
Sbjct: 405 KAVDVLTKGDNNDIDDIGLYAEGQLWLHRHHIMGRAVGFLPYVGWVTIIMTEKPIIKYIL 584
Query: 363 IGALGLLVITSKD* 404
IGALGLLVITSKD*
Sbjct: 585 IGALGLLVITSKD* 626
Score = 182 bits (392), Expect = 1e-044
Identities = 89/133 (66%), Positives = 100/133 (75%)
Frame = -3 / -1
Query: 403 *SFDVMTSKPSAPISRYLINGFSVMIIVIQPTYGR*PTARPIM*CCWSQSCPCAYNSRSS 224
*SFDV+TSKP+AP+S YL+ GFSVMIIV PT G+ PTA P++*C SQSCP A SS
Sbjct: 625 *SFDVITSKPNAPMSIYLMIGFSVMIIVTHPT*GKNPTALPMI*CL*SQSCPSA*RPMSS 446
Query: 223 PKLLSPLVRMSTSAVS*RSWTLITRWTIGISRPSILKTTISPVRIGSLLICKNRISPLLN 44
LLSP VR ST+ VS S TLI R T+GISRPS L TTISP RIGS +I KN ISPL
Sbjct: 445 MSLLSPFVRTSTALVSPLS*TLIAR*TMGISRPSTLNTTISPARIGSSVIRKNNISPL*K 266
Query: 43 PGSMLPERTTTTG 5
PGS+L ERTTTTG
Sbjct: 265 PGSILSERTTTTG 227
Score = 137 bits (294), Expect = 4e-031
Identities = 55/138 (39%), Positives = 95/138 (68%)
Frame = -2 / -3
Query: 419 AKFDTLIFRRYDQQAQCTNQQVLNKWFLSHDNCNPANIWKVAHSTSHNVMLLEPKLPMCI 240
A + L+FR Y++Q QCTN+ +L+ HDN NP+NI + ++S++H++M ++PKL I
Sbjct: 641 ACYVVLVFRCYNEQTQCTNEYILDDRLFCHDNSNPSNIRQESNSSAHDMMPVKPKLSFSI 462
Query: 239 **SVIPKIIVTFGEDVHFCSVLTFMDLNYAVDNWNFTAIDIENNYFSCANRIFAHMQKQD 60
+VI I+VTF +++ S+ + M+ + +++N NFT I+ E+N +C+NR+ +H Q+Q
Sbjct: 461 ETNVINVIVVTFC*NINCFSISSLMNFDCSMNNGNFTTINTEHNNLACSNRLISHPQEQY 282
Query: 59 ITPFKSRFHATRENHYNW 6
I+ K+RFH REN+ +W
Sbjct: 281 ISSLKARFHTFRENNNHW 228
>gb|BT015660.1| Arabidopsis thaliana At3g15710 gene, complete cds
Length = 543
Score = 259 bits (560), Expect = 9e-068
Identities = 108/134 (80%), Positives = 119/134 (88%)
Frame = +3 / +1
Query: 3 APVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFNIDGREIPIVHRVIKVHERQDT 182
+PVVVVLS SMEPGF+RGDILFL M+ +PIR GEIVVF++DGREIPIVHR IKVHER DT
Sbjct: 142 SPVVVVLSESMEPGFQRGDILFLRMTDEPIRAGEIVVFSVDGREIPIVHRAIKVHERGDT 321
Query: 183 AEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWITIIMTEKPFIKYLL 362
VD+LTKGDNN DD LYA GQLWL +HHIMGRAVG+LPYVGW+TIIMTEKP IKY+L
Sbjct: 322 KAVDVLTKGDNNDIDDIGLYAEGQLWLHRHHIMGRAVGFLPYVGWVTIIMTEKPIIKYIL 501
Query: 363 IGALGLLVITSKD* 404
IGALGLLVITSKD*
Sbjct: 502 IGALGLLVITSKD* 543
Score = 182 bits (392), Expect = 1e-044
Identities = 89/133 (66%), Positives = 100/133 (75%)
Frame = -3 / -2
Query: 403 *SFDVMTSKPSAPISRYLINGFSVMIIVIQPTYGR*PTARPIM*CCWSQSCPCAYNSRSS 224
*SFDV+TSKP+AP+S YL+ GFSVMIIV PT G+ PTA P++*C SQSCP A SS
Sbjct: 542 *SFDVITSKPNAPMSIYLMIGFSVMIIVTHPT*GKNPTALPMI*CL*SQSCPSA*RPMSS 363
Query: 223 PKLLSPLVRMSTSAVS*RSWTLITRWTIGISRPSILKTTISPVRIGSLLICKNRISPLLN 44
LLSP VR ST+ VS S TLI R T+GISRPS L TTISP RIGS +I KN ISPL
Sbjct: 362 MSLLSPFVRTSTALVSPLS*TLIAR*TMGISRPSTLNTTISPARIGSSVIRKNNISPL*K 183
Query: 43 PGSMLPERTTTTG 5
PGS+L ERTTTTG
Sbjct: 182 PGSILSERTTTTG 144
Score = 137 bits (293), Expect = 6e-031
Identities = 54/133 (40%), Positives = 93/133 (69%)
Frame = -2 / -1
Query: 404 LIFRRYDQQAQCTNQQVLNKWFLSHDNCNPANIWKVAHSTSHNVMLLEPKLPMCI**SVI 225
L+FR Y++Q QCTN+ +L+ HDN NP+NI + ++S++H++M ++PKL I +VI
Sbjct: 543 LVFRCYNEQTQCTNEYILDDRLFCHDNSNPSNIRQESNSSAHDMMPVKPKLSFSIETNVI 364
Query: 224 PKIIVTFGEDVHFCSVLTFMDLNYAVDNWNFTAIDIENNYFSCANRIFAHMQKQDITPFK 45
I+VTF +++ S+ + M+ + +++N NFT I+ E+N +C+NR+ +H Q+Q I+ K
Sbjct: 363 NVIVVTFC*NINCFSISSLMNFDCSMNNGNFTTINTEHNNLACSNRLISHPQEQYISSLK 184
Query: 44 SRFHATRENHYNW 6
+RFH REN+ +W
Sbjct: 183 ARFHTFRENNNHW 145
>ref|NM_112441.3| Arabidopsis thaliana peptidase AT3G15710 mRNA, complete cds
Length = 872
Score = 259 bits (560), Expect = 9e-068
Identities = 108/134 (80%), Positives = 119/134 (88%)
Frame = +3 / +1
Query: 3 APVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFNIDGREIPIVHRVIKVHERQDT 182
+PVVVVLS SMEPGF+RGDILFL M+ +PIR GEIVVF++DGREIPIVHR IKVHER DT
Sbjct: 265 SPVVVVLSESMEPGFQRGDILFLRMTDEPIRAGEIVVFSVDGREIPIVHRAIKVHERGDT 444
Query: 183 AEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWITIIMTEKPFIKYLL 362
VD+LTKGDNN DD LYA GQLWL +HHIMGRAVG+LPYVGW+TIIMTEKP IKY+L
Sbjct: 445 KAVDVLTKGDNNDIDDIGLYAEGQLWLHRHHIMGRAVGFLPYVGWVTIIMTEKPIIKYIL 624
Query: 363 IGALGLLVITSKD* 404
IGALGLLVITSKD*
Sbjct: 625 IGALGLLVITSKD* 666
Score = 182 bits (392), Expect = 1e-044
Identities = 89/133 (66%), Positives = 100/133 (75%)
Frame = -3 / -1
Query: 403 *SFDVMTSKPSAPISRYLINGFSVMIIVIQPTYGR*PTARPIM*CCWSQSCPCAYNSRSS 224
*SFDV+TSKP+AP+S YL+ GFSVMIIV PT G+ PTA P++*C SQSCP A SS
Sbjct: 665 *SFDVITSKPNAPMSIYLMIGFSVMIIVTHPT*GKNPTALPMI*CL*SQSCPSA*RPMSS 486
Query: 223 PKLLSPLVRMSTSAVS*RSWTLITRWTIGISRPSILKTTISPVRIGSLLICKNRISPLLN 44
LLSP VR ST+ VS S TLI R T+GISRPS L TTISP RIGS +I KN ISPL
Sbjct: 485 MSLLSPFVRTSTALVSPLS*TLIAR*TMGISRPSTLNTTISPARIGSSVIRKNNISPL*K 306
Query: 43 PGSMLPERTTTTG 5
PGS+L ERTTTTG
Sbjct: 305 PGSILSERTTTTG 267
Score = 137 bits (294), Expect = 4e-031
Identities = 55/138 (39%), Positives = 95/138 (68%)
Frame = -2 / -3
Query: 419 AKFDTLIFRRYDQQAQCTNQQVLNKWFLSHDNCNPANIWKVAHSTSHNVMLLEPKLPMCI 240
A + L+FR Y++Q QCTN+ +L+ HDN NP+NI + ++S++H++M ++PKL I
Sbjct: 681 ACYVVLVFRCYNEQTQCTNEYILDDRLFCHDNSNPSNIRQESNSSAHDMMPVKPKLSFSI 502
Query: 239 **SVIPKIIVTFGEDVHFCSVLTFMDLNYAVDNWNFTAIDIENNYFSCANRIFAHMQKQD 60
+VI I+VTF +++ S+ + M+ + +++N NFT I+ E+N +C+NR+ +H Q+Q
Sbjct: 501 ETNVINVIVVTFC*NINCFSISSLMNFDCSMNNGNFTTINTEHNNLACSNRLISHPQEQY 322
Query: 59 ITPFKSRFHATRENHYNW 6
I+ K+RFH REN+ +W
Sbjct: 321 ISSLKARFHTFRENNNHW 268
>gb|AV537671.1|AV537671 AV537671 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ100e03F 3', mRNA sequence
Length = 521
Score = 255 bits (552), Expect = 1e-066
Identities = 106/134 (79%), Positives = 118/134 (88%)
Frame = +3 / -1
Query: 3 APVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFNIDGREIPIVHRVIKVHERQDT 182
+PVVVVLS SMEPGF+RGDILF+ M+ +PIR GEIVVF++DGREIPIVHR IKVHER DT
Sbjct: 515 SPVVVVLSESMEPGFQRGDILFVRMTDEPIRAGEIVVFSVDGREIPIVHRAIKVHERGDT 336
Query: 183 AEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWITIIMTEKPFIKYLL 362
VD+LTKGDNN DD LYA GQLWL +HHIMGRAVG+LPYVGW+ IIMTEKP IKY+L
Sbjct: 335 KAVDVLTKGDNNDIDDIGLYAEGQLWLHRHHIMGRAVGFLPYVGWVAIIMTEKPIIKYIL 156
Query: 363 IGALGLLVITSKD* 404
IGALGLLVITSKD*
Sbjct: 155 IGALGLLVITSKD* 114
Score = 177 bits (382), Expect = 3e-043
Identities = 87/133 (65%), Positives = 98/133 (73%)
Frame = -3 / +1
Query: 403 *SFDVMTSKPSAPISRYLINGFSVMIIVIQPTYGR*PTARPIM*CCWSQSCPCAYNSRSS 224
*SFDV+TSKP+AP+S YL+ GFSVMII PT G+ PTA P++*C SQSCP A SS
Sbjct: 115 *SFDVITSKPNAPMSIYLMIGFSVMIIATHPT*GKNPTALPMI*CL*SQSCPSA*RPMSS 294
Query: 223 PKLLSPLVRMSTSAVS*RSWTLITRWTIGISRPSILKTTISPVRIGSLLICKNRISPLLN 44
LLSP VR ST+ VS S TLI R T+GISRPS L TTISP RIGS +I N ISPL
Sbjct: 295 MSLLSPFVRTSTALVSPLS*TLIAR*TMGISRPSTLNTTISPARIGSSVIRTNNISPL*K 474
Query: 43 PGSMLPERTTTTG 5
PGS+L ERTTTTG
Sbjct: 475 PGSILSERTTTTG 513
Score = 135 bits (289), Expect = 2e-030
Identities = 54/138 (39%), Positives = 94/138 (68%)
Frame = -2 / +3
Query: 419 AKFDTLIFRRYDQQAQCTNQQVLNKWFLSHDNCNPANIWKVAHSTSHNVMLLEPKLPMCI 240
A + L+FR Y++Q QCTN+ +L+ HDN NP+NI + ++S++H++M ++PKL I
Sbjct: 99 ACYVVLVFRCYNEQTQCTNEYILDDRLFCHDNSNPSNIRQESNSSAHDMMPVKPKLSFSI 278
Query: 239 **SVIPKIIVTFGEDVHFCSVLTFMDLNYAVDNWNFTAIDIENNYFSCANRIFAHMQKQD 60
+VI I+VTF +++ S+ + M+ + +++N NFT I+ E+N +C+NR+ +H +Q
Sbjct: 279 ETNVINVIVVTFC*NINCFSISSLMNFDCSMNNGNFTTINTEHNNLACSNRLISHPHEQY 458
Query: 59 ITPFKSRFHATRENHYNW 6
I+ K+RFH REN+ +W
Sbjct: 459 ISSLKARFHTFRENNNHW 512
>gb|H76949.1|H76949 17380 Lambda-PRL2 Arabidopsis thaliana cDNA clone 199L4T7, mRNA
sequence
Length = 517
Score = 239 bits (517), Expect = 7e-062
Identities = 94/115 (81%), Positives = 104/115 (90%)
Frame = +3 / +1
Query: 3 APVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFNIDGREIPIVHRVIKVHERQDT 182
+PVVVVLSGSMEPGFKRGDIL LHMSKDPIR GEI VFN+DGR IPIVHRVIKVHER++T
Sbjct: 28 SPVVVVLSGSMEPGFKRGDILXLHMSKDPIRAGEIXVFNVDGRXIPIVHRVIKVHERENT 207
Query: 183 AEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWITIIMTEKPF 347
EVD+LTKGDNN+GDDRLLYA GQLWL +HHIMGRAVG+LPYVGW+ IIM K +
Sbjct: 208 GEVDVLTKGDNNYGDDRLLYAEGQLWLHRHHIMGRAVGFLPYVGWVPIIMARKXY 372
Score = 170 bits (366), Expect = 5e-041
Identities = 79/112 (70%), Positives = 84/112 (75%)
Frame = -3 / -3
Query: 340 FSVMIIVIQPTYGR*PTARPIM*CCWSQSCPCAYNSRSSPKLLSPLVRMSTSAVS*RSWT 161
F MII PT G+ PTARPI+*C SQSCP AY S SSP LLSP VR STS V S T
Sbjct: 365 FLAMIIGTHPT*GKNPTARPII*CR*SQSCPSAYRSLSSP*LLSPFVRTSTSPVFSLS*T 186
Query: 160 LITRWTIGISRPSILKTTISPVRIGSLLICKNRISPLLNPGSMLPERTTTTG 5
L+TRWT+GI RPS LKT ISP RIGSLL+CK ISPLL PGSMLPE TTTTG
Sbjct: 185 LMTRWTMGIXRPSTLKTXISPARIGSLLMCKXNISPLLKPGSMLPEXTTTTG 30
Score = 118 bits (252), Expect = 3e-025
Identities = 50/111 (45%), Positives = 75/111 (67%)
Frame = -2 / -2
Query: 341 FLSHDNCNPANIWKVAHSTSHNVMLLEPKLPMCI**SVIPKIIVTFGEDVHFCSVLTFMD 162
F HDN +P+NI + ST+H +M ++PKL I SVI +IVTF +++F + F++
Sbjct: 366 FSGHDNRHPSNIRQEPDSTTHYMMPMKPKLSFSIQKSVISIVIVTFR*NINFSCIFPFVN 187
Query: 161 LNYAVDNWNFTAIDIENNYFSCANRIFAHMQKQDITPFKSRFHATRENHYN 9
LN +DN N T I+IEN F+C+NR+F H+Q Q I P K+ FHA+RE +++
Sbjct: 186 LNDTMDNGNXTTINIENXNFTCSNRVFTHVQXQYIPPLKTGFHASREXNHH 34
>gb|AI994694.1|AI994694 701499287 A. thaliana, Ohio State clone set Arabidopsis thaliana
cDNA clone 701499287, mRNA sequence
Length = 477
Score = 236 bits (509), Expect = 1e-060
Identities = 93/108 (86%), Positives = 103/108 (95%)
Frame = +3 / +3
Query: 81 KDPIRTGEIVVFNIDGREIPIVHRVIKVHERQDTAEVDILTKGDNNFGDDRLLYAHGQLW 260
KDPIR GEIVVFN+DGR+IPIVHRVIKVHER++T EVD+LTKGDNN+GDDRLLYA GQLW
Sbjct: 3 KDPIRAGEIVVFNVDGRDIPIVHRVIKVHERENTGEVDVLTKGDNNYGDDRLLYAEGQLW 182
Query: 261 LQQHHIMGRAVGYLPYVGWITIIMTEKPFIKYLLIGALGLLVITSKD* 404
L +HHIMGRAVG+LPYVGW+TIIMTEKP IKY+LIGALGLLVITSKD*
Sbjct: 183 LHRHHIMGRAVGFLPYVGWVTIIMTEKPIIKYILIGALGLLVITSKD* 326
Score = 165 bits (354), Expect = 2e-039
Identities = 77/107 (71%), Positives = 85/107 (79%)
Frame = -3 / -3
Query: 400 SFDVMTSKPSAPISRYLINGFSVMIIVIQPTYGR*PTARPIM*CCWSQSCPCAYNSRSSP 221
SFDV+TSKP+AP+ YL+ GFSVMIIV PT G+ PTARPI+*C SQSCP AY S SSP
Sbjct: 322 SFDVITSKPNAPMRIYLMIGFSVMIIVTHPT*GKNPTARPII*CR*SQSCPSAYRSLSSP 143
Query: 220 KLLSPLVRMSTSAVS*RSWTLITRWTIGISRPSILKTTISPVRIGSL 80
LLSP VR STS V S TL+TRWT+GISRPS LKTTISP RIGSL
Sbjct: 142 *LLSPFVRTSTSPVFSLS*TLMTRWTMGISRPSTLKTTISPARIGSL 2
Score = 108 bits (231), Expect = 2e-022
Identities = 45/104 (43%), Positives = 69/104 (66%)
Frame = -2 / -2
Query: 392 RYDQQAQCTNQQVLNKWFLSHDNCNPANIWKVAHSTSHNVMLLEPKLPMCI**SVIPKII 213
RY++ QCT + +L+ HDN +P+NI + ST+H +M ++PKL I SVI +I
Sbjct: 314 RYNE*TQCTYENILDDRLFCHDNSHPSNIRQEPDSTTHYMMSMKPKLSFSIQKSVISIVI 135
Query: 212 VTFGEDVHFCSVLTFMDLNYAVDNWNFTAIDIENNYFSCANRIF 81
VTF +++F + F++LN +DN N T I+IENN F+C+NR+F
Sbjct: 134 VTFR*NINFSCIFPFVNLNDTMDNGNITTINIENNNFTCSNRVF 3
>gb|R90653.1|R90653 17008 Lambda-PRL2 Arabidopsis thaliana cDNA clone 191C4T7, mRNA
sequence
Length = 512
Score = 233 bits (504), Expect = 5e-060
Identities = 92/108 (85%), Positives = 102/108 (94%)
Frame = +3 / +3
Query: 81 KDPIRTGEIVVFNIDGREIPIVHRVIKVHERQDTAEVDILTKGDNNFGDDRLLYAHGQLW 260
KDPIR GEI VFN+DGR+IPIVHRVIKVHER++T EVD+LTKGDNN+GDDRLLYA GQLW
Sbjct: 3 KDPIRAGEIXVFNVDGRDIPIVHRVIKVHERENTGEVDVLTKGDNNYGDDRLLYAEGQLW 182
Query: 261 LQQHHIMGRAVGYLPYVGWITIIMTEKPFIKYLLIGALGLLVITSKD* 404
L +HHIMGRAVG+LPYVGW+TIIMTEKP IKY+LIGALGLLVITSKD*
Sbjct: 183 LHRHHIMGRAVGFLPYVGWVTIIMTEKPIIKYILIGALGLLVITSKD* 326
Score = 162 bits (349), Expect = 1e-038
Identities = 76/107 (71%), Positives = 84/107 (78%)
Frame = -3 / -2
Query: 400 SFDVMTSKPSAPISRYLINGFSVMIIVIQPTYGR*PTARPIM*CCWSQSCPCAYNSRSSP 221
SFDV+TSKP+AP+ YL+ GFSVMIIV PT G+ PTARPI+*C SQSCP AY S SSP
Sbjct: 322 SFDVITSKPNAPMRIYLMIGFSVMIIVTHPT*GKNPTARPII*CR*SQSCPSAYRSLSSP 143
Query: 220 KLLSPLVRMSTSAVS*RSWTLITRWTIGISRPSILKTTISPVRIGSL 80
LLSP VR STS V S TL+TRWT+GISRPS LKT ISP RIGSL
Sbjct: 142 *LLSPFVRTSTSPVFSLS*TLMTRWTMGISRPSTLKTXISPARIGSL 2
Score = 105 bits (224), Expect = 2e-021
Identities = 44/104 (42%), Positives = 68/104 (65%)
Frame = -2 / -1
Query: 392 RYDQQAQCTNQQVLNKWFLSHDNCNPANIWKVAHSTSHNVMLLEPKLPMCI**SVIPKII 213
RY++ QCT + +L+ HDN +P+NI + ST+H +M ++PKL I SVI +I
Sbjct: 314 RYNE*TQCTYENILDDRLFCHDNSHPSNIRQEPDSTTHYMMSMKPKLSFSIQKSVISIVI 135
Query: 212 VTFGEDVHFCSVLTFMDLNYAVDNWNFTAIDIENNYFSCANRIF 81
VTF +++F + F++LN +DN N T I+IEN F+C+NR+F
Sbjct: 134 VTFR*NINFSCIFPFVNLNDTMDNGNITTINIENXNFTCSNRVF 3
>gb|H76629.1|H76629 18334 Lambda-PRL2 Arabidopsis thaliana cDNA clone 199L5T7, mRNA
sequence
Length = 577
Score = 205 bits (443), Expect(2) = 3e-052
Identities = 81/94 (86%), Positives = 89/94 (94%)
Frame = +3 / +1
Query: 3 APVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFNIDGREIPIVHRVIKVHERQDT 182
+PVVVVLSGSMEPGFKRGDIL LHMSKDPIR GEIVVFN+DGR+IPIVHRVIKVHER++T
Sbjct: 28 SPVVVVLSGSMEPGFKRGDILXLHMSKDPIRAGEIVVFNVDGRDIPIVHRVIKVHERENT 207
Query: 183 AEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMG 284
EVD+LTKGDNN+GDDRLLYA GQLWL +HHIMG
Sbjct: 208 GEVDVLTKGDNNYGDDRLLYAEGQLWLHRHHIMG 309
Score = 156 bits (335), Expect = 1e-036
Identities = 71/93 (76%), Positives = 75/93 (80%)
Frame = -3 / -3
Query: 283 PIM*CCWSQSCPCAYNSRSSPKLLSPLVRMSTSAVS*RSWTLITRWTIGISRPSILKTTI 104
PI+*C SQSCP AY S SSP LLSP VR STS V S TL+TRWT+GISRPS LKTTI
Sbjct: 308 PII*CR*SQSCPSAYRSLSSP*LLSPFVRTSTSPVFSLS*TLMTRWTMGISRPSTLKTTI 129
Query: 103 SPVRIGSLLICKNRISPLLNPGSMLPERTTTTG 5
SP RIGSLL+CK ISPLL PGSMLPERTTTTG
Sbjct: 128 SPARIGSLLMCKXNISPLLKPGSMLPERTTTTG 30
Score = 105 bits (224), Expect = 2e-021
Identities = 43/91 (47%), Positives = 64/91 (70%)
Frame = -2 / -2
Query: 281 HNVMLLEPKLPMCI**SVIPKIIVTFGEDVHFCSVLTFMDLNYAVDNWNFTAIDIENNYF 102
H +M ++PKL I SVI +IVTF +++F + F++LN +DN N T I+IENN F
Sbjct: 306 HYMMSMKPKLSFSIQKSVISIVIVTFR*NINFSCIFPFVNLNDTMDNGNITTINIENNNF 127
Query: 101 SCANRIFAHMQKQDITPFKSRFHATRENHYN 9
+C+NR+F H+Q Q I P K+ FHA+REN+++
Sbjct: 126 TCSNRVFTHVQXQYIPPLKTGFHASRENNHH 34
Score = 22.6 bits (43), Expect(2) = 3e-052
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3 / +3
Query: 294 GYLPYVGW 317
G LPYVGW
Sbjct: 321 GSLPYVGW 344
>gb|BP611804.1|BP611804 BP611804 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-87-D04 3',
mRNA sequence
Length = 436
Score = 124 bits (266), Expect(2) = 3e-048
Identities = 46/56 (82%), Positives = 53/56 (94%)
Frame = +3 / -3
Query: 114 FNIDGREIPIVHRVIKVHERQDTAEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIM 281
FN+DGR+IPIVHRVIKVHER++T EVD+LTKGDNN+GDDRLLYA GQLWL +HHIM
Sbjct: 434 FNVDGRDIPIVHRVIKVHERENTGEVDVLTKGDNNYGDDRLLYAEGQLWLHRHHIM 267
Score = 90.0 bits (190), Expect(2) = 3e-048
Identities = 36/41 (87%), Positives = 40/41 (97%)
Frame = +3 / -2
Query: 282 GRAVGYLPYVGWITIIMTEKPFIKYLLIGALGLLVITSKD* 404
GRAVG+LPYVGW+TIIMT+KP IKY+LIGALGLLVITSKD*
Sbjct: 267 GRAVGFLPYVGWVTIIMTQKPIIKYILIGALGLLVITSKD* 145
Score = 83.1 bits (175), Expect(2) = 6e-028
Identities = 40/61 (65%), Positives = 44/61 (72%)
Frame = -3 / +1
Query: 295 PTARPIM*CCWSQSCPCAYNSRSSPKLLSPLVRMSTSAVS*RSWTLITRWTIGISRPSIL 116
P + I+*C SQSCP AY S SSP LLSP VR STS V S TL+TRWT+GISRPS L
Sbjct: 253 PDSTTII*CR*SQSCPSAYRSLSSP*LLSPFVRTSTSPVFSLS*TLMTRWTMGISRPSTL 432
Query: 115 K 113
K
Sbjct: 433 K 435
Score = 63.8 bits (133), Expect(2) = 6e-028
Identities = 27/41 (65%), Positives = 33/41 (80%)
Frame = -3 / +2
Query: 400 SFDVMTSKPSAPISRYLINGFSVMIIVIQPTYGR*PTARPI 278
SFDV+TSKP+AP+ YL+ GF VMIIV PT G+ PTARP+
Sbjct: 149 SFDVITSKPNAPMRIYLMIGFCVMIIVTHPT*GKNPTARPL 271
>gb|H76216.1|H76216 17921 Lambda-PRL2 Arabidopsis thaliana cDNA clone 197L4T7, mRNA
sequence
Length = 441
Score = 188 bits (405), Expect(2) = 6e-047
Identities = 76/94 (80%), Positives = 84/94 (89%)
Frame = +3 / +1
Query: 3 APVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFNIDGREIPIVHRVIKVHERQDT 182
+PVVVVLSGSMEPGFKRGDIL LHMSKDPIR GEI VFN+DGR IPIVHRVIKVH R++T
Sbjct: 28 SPVVVVLSGSMEPGFKRGDILSLHMSKDPIRAGEIXVFNVDGRXIPIVHRVIKVHGRENT 207
Query: 183 AEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMG 284
EVD+LT GDNN+GDDRLLYA GQL + +HHIMG
Sbjct: 208 GEVDVLTXGDNNYGDDRLLYAEGQLLVHRHHIMG 309
Score = 137 bits (293), Expect = 6e-031
Identities = 64/93 (68%), Positives = 71/93 (76%)
Frame = -3 / -2
Query: 283 PIM*CCWSQSCPCAYNSRSSPKLLSPLVRMSTSAVS*RSWTLITRWTIGISRPSILKTTI 104
PI+* ++S P AY S SSP LLSP VR STS V TL+TRWT+GI RPS LKT I
Sbjct: 308 PII*XR*TKSXPSAYRSLSSP*LLSPXVRTSTSPVFSLP*TLMTRWTMGIXRPSTLKTXI 129
Query: 103 SPVRIGSLLICKNRISPLLNPGSMLPERTTTTG 5
SP RIGSLL+CK+ ISPLL PGSMLPERTTTTG
Sbjct: 128 SPARIGSLLMCKDNISPLLKPGSMLPERTTTTG 30
Score = 22.1 bits (42), Expect(2) = 6e-047
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +3 / +2
Query: 282 GRAVGYLPYVGW 317
GR G PYV W
Sbjct: 308 GRXXGXXPYVXW 343
>dbj|AB017071.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MSJ11
Length = 81370
Score = 57.0 bits (118), Expect(7) = 2e-043
Identities = 23/30 (76%), Positives = 24/30 (80%)
Frame = +3 / -3
Query: 207 GDNNFGDDRLLYAHGQLWLQQHHIMGRAVG 296
GDNN DD LYA GQLWL +HHIMGRAVG
Sbjct: 33314 GDNNDIDDIGLYAEGQLWLHRHHIMGRAVG 33225
Score = 46.4 bits (95), Expect(7) = 2e-043
Identities = 18/30 (60%), Positives = 23/30 (76%)
Frame = +3 / -1
Query: 36 EPGFKRGDILFLHMSKDPIRTGEIVVFNID 125
E +GDILFL M+ +PIR GEIVVF++D
Sbjct: 33748 EANVTQGDILFLRMTDEPIRAGEIVVFSVD 33659
Score = 46.0 bits (94), Expect(7) = 2e-043
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +3 / -1
Query: 297 YLPYVGWITIIMTEKPFIK 353
+LPYVGW+TIIMTEKP IK
Sbjct: 33121 FLPYVGWVTIIMTEKPIIK 33065
Score = 37.7 bits (76), Expect(7) = 2e-043
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +3 / -3
Query: 345 FIKYLLIGALGLLVITSKD* 404
F Y+LIGALGLLVITSKD*
Sbjct: 32975 FF*YILIGALGLLVITSKD* 32916
Score = 34.5 bits (69), Expect(7) = 2e-043
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +3 / -1
Query: 3 APVVVVLSGSMEPGFKR 53
+PVVVVLS SMEPGF+R
Sbjct: 33859 SPVVVVLSESMEPGFQR 33809
Score = 32.2 bits (64), Expect(7) = 2e-043
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +3 / -2
Query: 114 FNIDGREIPIVHRVIKV 164
F GREIPIVHR IKV
Sbjct: 33582 FVFQGREIPIVHRAIKV 33532
Score = 31.8 bits (63), Expect(7) = 2e-043
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +3 / -3
Query: 159 KVHERQDTAEVDILTKG 209
+VHER DT VD+LTKG
Sbjct: 33437 QVHERGDTKAVDVLTKG 33387
>gb|BP624442.1|BP624442 BP624442 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-40-E08 3',
mRNA sequence
Length = 425
Score = 167 bits (360), Expect = 3e-040
Identities = 65/79 (82%), Positives = 74/79 (93%)
Frame = +3 / -3
Query: 168 ERQDTAEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWITIIMTEKPF 347
+R++T EVD+LTKGDNN+GDDRLLYA GQLWL +HHIMGRAVG+LPY GW+TIIMTEKP
Sbjct: 423 QRENTGEVDVLTKGDNNYGDDRLLYAEGQLWLHRHHIMGRAVGFLPYFGWVTIIMTEKPI 244
Query: 348 IKYLLIGALGLLVITSKD* 404
IKY+LIGALGLLVITSKD*
Sbjct: 243 IKYILIGALGLLVITSKD* 187
Score = 104 bits (222), Expect = 4e-021
Identities = 50/74 (67%), Positives = 56/74 (75%)
Frame = -3 / +2
Query: 400 SFDVMTSKPSAPISRYLINGFSVMIIVIQPTYGR*PTARPIM*CCWSQSCPCAYNSRSSP 221
SFDV+TSKP+AP+ YL+ GFSVMIIV P G+ PTARPI+*C SQSCP A S SSP
Sbjct: 191 SFDVITSKPNAPMRIYLMIGFSVMIIVTHPK*GKNPTARPII*CR*SQSCPSA*RSLSSP 370
Query: 220 KLLSPLVRMSTSAV 179
LLSP VR STS V
Sbjct: 371 *LLSPFVRTSTSPV 412
>gb|BP662042.1|BP662042 BP662042 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-10-B21 3',
mRNA sequence
Length = 435
Score = 150 bits (323), Expect = 4e-035
Identities = 60/75 (80%), Positives = 66/75 (88%)
Frame = +3 / -3
Query: 180 TAEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWITIIMTEKPFIKYL 359
T EVD+LTKGDNN+GDDRLLYA GQLWL +HHIM RAVG+LPYVGW+TIIMTEKP IKY+
Sbjct: 433 TGEVDVLTKGDNNYGDDRLLYAEGQLWLHRHHIMVRAVGFLPYVGWVTIIMTEKPIIKYI 254
Query: 360 LIGALGLLVITSKD* 404
LIGALGLL KD*
Sbjct: 253 LIGALGLLGYNVKD* 209
>gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom arm complete sequence
Length = 14668883
Score = 57.0 bits (118), Expect(6) = 7e-035
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +3 / +3
Query: 54 GDILFLHMSKDPIRTGEIVVFNID 125
GDILFLHMSKDPIR GEIVVFN+D
Sbjct: 3950940 GDILFLHMSKDPIRAGEIVVFNVD 3951011
Score = 46.0 bits (94), Expect(6) = 7e-035
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +3 / +1
Query: 297 YLPYVGWITIIMTEKPFIK 353
+LPYVGW+TIIMTEKP IK
Sbjct: 3951547 FLPYVGWVTIIMTEKPIIK 3951603
Score = 40.9 bits (83), Expect(6) = 7e-035
Identities = 17/20 (85%), Positives = 20/20 (100%)
Frame = +3 / +1
Query: 345 FIKYLLIGALGLLVITSKD* 404
F++Y+LIGALGLLVITSKD*
Sbjct: 3951691 FLQYILIGALGLLVITSKD* 3951750
Score = 34.1 bits (68), Expect(6) = 7e-035
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +3 / +3
Query: 162 VHERQDTAEVDILTKG 209
VHER++T EVD+LTKG
Sbjct: 3951243 VHERENTGEVDVLTKG 3951290
Score = 31.3 bits (62), Expect(6) = 7e-035
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3 / +1
Query: 126 GREIPIVHRVIKV 164
GR+IPIVHRVIKV
Sbjct: 3951106 GRDIPIVHRVIKV 3951144
Score = 29.5 bits (58), Expect(6) = 7e-035
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1 / +2
Query: 205 KVTIILGMTDYYMHMGSFGSSNITLWDVL 291
+VTI + MTD+ M SFG +I W VL
Sbjct: 3951353 QVTITMEMTDFCMLKDSFGFIDII*WVVL 3951439
>gb|AC008016.2|F6D8 Arabidopsis thaliana chromosome 1 BAC F6D8 sequence, complete sequence
Length = 117737
Score = 57.0 bits (118), Expect(6) = 9e-035
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +3 / -2
Query: 54 GDILFLHMSKDPIRTGEIVVFNID 125
GDILFLHMSKDPIR GEIVVFN+D
Sbjct: 54133 GDILFLHMSKDPIRAGEIVVFNVD 54062
Score = 46.0 bits (94), Expect(6) = 9e-035
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +3 / -3
Query: 297 YLPYVGWITIIMTEKPFIK 353
+LPYVGW+TIIMTEKP IK
Sbjct: 53526 FLPYVGWVTIIMTEKPIIK 53470
Score = 40.9 bits (83), Expect(6) = 9e-035
Identities = 17/20 (85%), Positives = 20/20 (100%)
Frame = +3 / -3
Query: 345 FIKYLLIGALGLLVITSKD* 404
F++Y+LIGALGLLVITSKD*
Sbjct: 53382 FLQYILIGALGLLVITSKD* 53323
Score = 34.1 bits (68), Expect(6) = 9e-035
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +3 / -2
Query: 162 VHERQDTAEVDILTKG 209
VHER++T EVD+LTKG
Sbjct: 53830 VHERENTGEVDVLTKG 53783
Score = 31.3 bits (62), Expect(6) = 9e-035
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3 / -3
Query: 126 GREIPIVHRVIKV 164
GR+IPIVHRVIKV
Sbjct: 53967 GRDIPIVHRVIKV 53929
Score = 29.5 bits (58), Expect(6) = 9e-035
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1 / -1
Query: 205 KVTIILGMTDYYMHMGSFGSSNITLWDVL 291
+VTI + MTD+ M SFG +I W VL
Sbjct: 53720 QVTITMEMTDFCMLKDSFGFIDII*WVVL 53634
>gb|AV785811.1|AV785811 AV785811 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-68-I04 3',
mRNA sequence
Length = 409
Score = 86.3 bits (182), Expect(2) = 2e-034
Identities = 35/39 (89%), Positives = 38/39 (97%)
Frame = +3 / -1
Query: 288 AVGYLPYVGWITIIMTEKPFIKYLLIGALGLLVITSKD* 404
AVG+LPYVGW+TIIMTEKP IKY+LIGALGLLVITSKD*
Sbjct: 295 AVGFLPYVGWVTIIMTEKPIIKYILIGALGLLVITSKD* 179
Score = 82.6 bits (174), Expect(2) = 2e-034
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = +3 / -3
Query: 177 DTAEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGR 287
+T EVD+LTKGDNN+GDDRLLYA GQLWL +HHIMGR
Sbjct: 407 NTGEVDVLTKGDNNYGDDRLLYAEGQLWLHRHHIMGR 297
>gb|AV549660.1|AV549660 AV549660 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ100e03R 5', mRNA sequence
Length = 429
Score = 128 bits (274), Expect = 2e-028
Identities = 53/68 (77%), Positives = 60/68 (88%)
Frame = +3 / +1
Query: 3 APVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFNIDGREIPIVHRVIKVHERQDT 182
+PVVVVLS SMEPGF+RGDILFL M+ +PIR GEIVVF++DGREIPIVHR IKVHER DT
Sbjct: 226 SPVVVVLSESMEPGFQRGDILFLRMTDEPIRAGEIVVFSVDGREIPIVHRAIKVHERGDT 405
Query: 183 AEVDILTK 206
VD+LTK
Sbjct: 406 KAVDVLTK 429
>gb|AV824350.1|AV824350 AV824350 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-68-I04 5',
mRNA sequence
Length = 415
Score = 86.3 bits (182), Expect(2) = 1e-023
Identities = 35/40 (87%), Positives = 37/40 (92%)
Frame = +3 / +1
Query: 3 APVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFNI 122
+PVVVVLSGSMEPGFKRGDILFLHMSKDPI GEIV FN+
Sbjct: 229 SPVVVVLSGSMEPGFKRGDILFLHMSKDPIXAGEIVXFNV 348
Score = 46.0 bits (94), Expect(2) = 1e-023
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = +3 / +2
Query: 123 DGREIPIVHRVIKVHERQDTAE 188
DGR+IPI HRVIKVHER++T E
Sbjct: 350 DGRDIPIXHRVIKVHERENTGE 415
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,948,005,215
Number of Sequences: 1013581
Number of extensions: 28796498
Number of successful extensions: 151976
Number of sequences better than 1.0e-020: 34
length of database: 302,980,290
effective HSP length: 56
effective length of database: 246,219,754
effective search space used: 57369202682
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)