TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2542097.2.1
(887 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AV566533.1|AV566533 AV566533 Arabidopsis thaliana green ... 184 4e-045
gb|CK117984.1|CK117984 208n13.p1 AtM1 Arabidopsis thaliana ... 184 4e-045
gb|CK120143.1|CK120143 208l11.p1 AtM1 Arabidopsis thaliana ... 184 4e-045
gb|AY085515.1| Arabidopsis thaliana clone 1553 mRNA, comple... 184 4e-045
emb|BX833753.1|CNS09Z4Y Arabidopsis thaliana Full-length cD... 184 4e-045
emb|CS061622.1| Sequence 13 from Patent WO2005028656 184 4e-045
ref|NM_120334.2| Arabidopsis thaliana DNA binding AT5G02560... 184 4e-045
emb|BX833247.1|CNS09Z82 Arabidopsis thaliana Full-length cD... 182 1e-044
gb|BE038743.1|BE038743 AB06B11 AB Arabidopsis thaliana cDNA... 170 5e-041
gb|AU238727.1|AU238727 AU238727 RAFL19 Arabidopsis thaliana... 170 5e-041
gb|CF652260.1|CF652260 44-L020361-066-002-H11-SP6P MPIZ-ADI... 170 5e-041
gb|AV531332.1|AV531332 AV531332 Arabidopsis thaliana flower... 170 5e-041
gb|CK119396.1|CK119396 212o08.p1 AtM1 Arabidopsis thaliana ... 170 5e-041
gb|BT003669.1| Arabidopsis thaliana At5g59870 mRNA, complet... 170 5e-041
gb|AY085948.1| Arabidopsis thaliana clone 20036 mRNA, compl... 170 5e-041
dbj|AK117890.1| Arabidopsis thaliana At5g59870 mRNA for put... 170 5e-041
emb|CS061616.1| Sequence 7 from Patent WO2005028656 170 5e-041
ref|NM_125380.2| Arabidopsis thaliana DNA binding AT5G59870... 170 5e-041
emb|CS061648.1| Sequence 39 from Patent WO2005028656 116 1e-040
gb|BE039411.1|BE039411 AC03C02 AC Arabidopsis thaliana cDNA... 165 2e-039
gb|AV822264.1|AV822264 AV822264 RAFL5 Arabidopsis thaliana ... 165 2e-039
gb|CK121613.1|CK121613 202g14.p1 AtM1 Arabidopsis thaliana ... 165 2e-039
gb|CK121628.1|CK121628 202h17.p1 AtM1 Arabidopsis thaliana ... 165 2e-039
gb|AF385711.1|AF385711 Arabidopsis thaliana AT5g27670/F15A1... 165 2e-039
gb|AY078019.1| Arabidopsis thaliana AT5g27670/F15A18_130 mR... 165 2e-039
emb|CQ804506.1| Sequence 917 from Patent WO2004035798 165 2e-039
emb|CS061617.1| Sequence 8 from Patent WO2005028656 165 2e-039
ref|NM_122649.2| Arabidopsis thaliana DNA binding AT5G27670... 165 2e-039
gb|AV783757.1|AV783757 AV783757 RAFL5 Arabidopsis thaliana ... 163 6e-039
gb|BP560904.1|BP560904 BP560904 RAFL5 Arabidopsis thaliana ... 163 6e-039
emb|AL162971.1|ATT22P11 Arabidopsis thaliana DNA chromosome... 116 6e-039
emb|CS061642.1| Sequence 33 from Patent WO2005028656 113 1e-036
gb|AI996156.1|AI996156 701550262 A. thaliana, Columbia Col-... 154 3e-036
gb|CF652298.1|CF652298 46-L020577-066-004-K11-SP6P MPIZ-ADI... 154 5e-036
gb|CD531101.1|CD531101 09H10 Arabidopsis Leaf Senescence Li... 154 5e-036
gb|AF412092.1|AF412092 Arabidopsis thaliana At1g08880/F7G19... 154 5e-036
gb|AY093975.1| Arabidopsis thaliana At1g08880/F7G19_24 mRNA... 154 5e-036
emb|BX818384.1|CNS0ACP9 Arabidopsis thaliana Full-length cD... 154 5e-036
emb|CQ803632.1| Sequence 43 from Patent WO2004035798 154 5e-036
emb|CS061615.1| Sequence 6 from Patent WO2005028656 154 5e-036
ref|NM_100760.2| Arabidopsis thaliana DNA binding AT1G08880... 154 5e-036
gb|AV823082.1|AV823082 AV823082 RAFL5 Arabidopsis thaliana ... 153 7e-036
gb|AV533421.1|AV533421 AV533421 Arabidopsis thaliana flower... 153 7e-036
gb|AF411788.1|AF411788 Arabidopsis thaliana At1g54690/T22H2... 153 7e-036
gb|AY094023.1| Arabidopsis thaliana At1g54690/T22H22_12 mRN... 153 7e-036
gb|AY085671.1| Arabidopsis thaliana clone 16879 mRNA, compl... 153 7e-036
emb|BX817490.1|CNS0AEEH Arabidopsis thaliana Full-length cD... 153 7e-036
emb|CS061613.1| Sequence 4 from Patent WO2005028656 153 7e-036
ref|NM_104344.2| Arabidopsis thaliana DNA binding AT1G54690... 153 7e-036
emb|BX818184.1|CNS0ACP1 Arabidopsis thaliana Full-length cD... 151 3e-035
emb|CS061643.1| Sequence 34 from Patent WO2005028656 106 5e-035
gb|AU236626.1|AU236626 AU236626 RAFL15 Arabidopsis thaliana... 150 6e-035
gb|CB260030.1|CB260030 05-E9624-013-004-J01-T7R MPIZ-ADIS-0... 150 6e-035
gb|CB264931.1|CB264931 27-E013840-035-001-E07-T7R MPIZ-ADIS... 150 6e-035
gb|AV549923.1|AV549923 AV549923 Arabidopsis thaliana roots ... 150 6e-035
gb|CK118943.1|CK118943 215h05.p1 AtM1 Arabidopsis thaliana ... 150 6e-035
gb|CK120540.1|CK120540 207e04.p1 AtM1 Arabidopsis thaliana ... 150 6e-035
gb|BP562428.2|BP562428 BP562428 RAFL9 Arabidopsis thaliana ... 150 6e-035
gb|CB252995.1|CB252995 12-E018360-019-007-G03-T7R MPIZ-ADIS... 150 6e-035
gb|CB253336.1|CB253336 04-E010931-019-003-G01-T7R MPIZ-ADIS... 150 6e-035
emb|AX507844.1| Sequence 2539 from Patent WO0216655 150 6e-035
gb|BT002503.1| Arabidopsis thaliana Unknown protein mRNA, c... 150 6e-035
gb|BT004023.1| Arabidopsis thaliana clone RAFL15-12-B09 (R2... 150 6e-035
gb|BT005189.1| Arabidopsis thaliana clone U20557 putative h... 150 6e-035
gb|BT005779.1| Arabidopsis thaliana clone RAFL14-92-E07 (R2... 150 6e-035
gb|AY088261.1| Arabidopsis thaliana clone 4875 mRNA, comple... 150 6e-035
gb|BT006076.1| Arabidopsis thaliana clone U20287 putative h... 150 6e-035
emb|BX833721.1|CNS09Z9T Arabidopsis thaliana Full-length cD... 150 6e-035
emb|CQ803702.1| Sequence 113 from Patent WO2004035798 150 6e-035
emb|CS061611.1| Sequence 2 from Patent WO2005028656 150 6e-035
emb|CS061612.1| Sequence 3 from Patent WO2005028656 150 6e-035
ref|NM_118857.2| Arabidopsis thaliana DNA binding AT4G27230... 150 6e-035
ref|NM_124845.2| Arabidopsis thaliana RAT5 (RESISTANT TO AG... 150 6e-035
dbj|AB015475.1| Arabidopsis thaliana genomic DNA, chromosom... 113 7e-035
gb|AA728736.1|AA728736 33694 CD4-6 Arabidopsis thaliana cDN... 149 8e-035
gb|AV784548.1|AV784548 AV784548 RAFL5 Arabidopsis thaliana ... 149 8e-035
gb|AV822516.1|AV822516 AV822516 RAFL5 Arabidopsis thaliana ... 149 8e-035
gb|AV823554.1|AV823554 AV823554 RAFL5 Arabidopsis thaliana ... 149 8e-035
gb|AV535226.1|AV535226 AV535226 Arabidopsis thaliana flower... 149 8e-035
gb|AV535723.1|AV535723 AV535723 Arabidopsis thaliana flower... 149 8e-035
gb|AV545231.1|AV545231 AV545231 Arabidopsis thaliana roots ... 149 8e-035
gb|AV553941.1|AV553941 AV553941 Arabidopsis thaliana roots ... 149 8e-035
gb|CK117711.1|CK117711 214o12.p1 AtM1 Arabidopsis thaliana ... 149 8e-035
gb|CK121110.1|CK121110 204i23.p1 AtM1 Arabidopsis thaliana ... 149 8e-035
gb|CK121528.1|CK121528 202k22.p1 AtM1 Arabidopsis thaliana ... 149 8e-035
gb|CB254781.1|CB254781 60-E010740-019-001-G20-T7R MPIZ-ADIS... 149 8e-035
gb|AF370188.1| Arabidopsis thaliana putative histone H2A pr... 149 8e-035
gb|AY045967.1| Arabidopsis thaliana putative histone H2A pr... 149 8e-035
gb|AY062945.1| Arabidopsis thaliana putative histone H2A pr... 149 8e-035
gb|AY079320.1| Arabidopsis thaliana putative histone H2A pr... 149 8e-035
gb|AY085312.1| Arabidopsis thaliana clone 14470 mRNA, compl... 149 8e-035
gb|AY088714.1| Arabidopsis thaliana clone 927 mRNA, complet... 149 8e-035
emb|CS061620.1| Sequence 11 from Patent WO2005028656 149 8e-035
emb|CS061623.1| Sequence 14 from Patent WO2005028656 149 8e-035
ref|NM_103984.2| Arabidopsis thaliana DNA binding AT1G51060... 149 8e-035
ref|NM_112958.2| Arabidopsis thaliana DNA binding AT3G20670... 149 8e-035
gb|AV544309.1|AV544309 AV544309 Arabidopsis thaliana roots ... 149 1e-034
gb|AV824800.1|AV824800 AV824800 RAFL6 Arabidopsis thaliana ... 149 2e-034
gb|CB262369.1|CB262369 64-E8976-008-017-P15-pBl2 MPIZ-ADIS-... 148 3e-034
gb|CB254877.1|CB254877 57-E018428-019-008-A16-T7R MPIZ-ADIS... 148 3e-034
gb|AI995882.1|AI995882 701549039 A. thaliana, Columbia Col-... 147 4e-034
gb|AI999549.1|AI999549 701556365 A. thaliana, Columbia Col-... 147 4e-034
gb|CB253841.1|CB253841 86-E018438-019-009-K22-T7R MPIZ-ADIS... 147 6e-034
gb|AC069556.4|AC069556 Genomic Sequence For Arabidopsis tha... 106 2e-033
gb|AC007478.1|AC007478 Arabidopsis thaliana BAC F15A18 from... 106 3e-033
gb|AV534040.1|AV534040 AV534040 Arabidopsis thaliana flower... 141 3e-032
emb|BX833334.1|CNS09Z66 Arabidopsis thaliana Full-length cD... 141 3e-032
emb|CS061641.1| Sequence 32 from Patent WO2005028656 97 1e-031
emb|CS061639.1| Sequence 30 from Patent WO2005028656 97 2e-031
gb|BP810209.1|BP810209 BP810209 RAFL16 Arabidopsis thaliana... 138 2e-031
gb|CB254190.1|CB254190 77-E015331-019-005-I20-T7R MPIZ-ADIS... 97 3e-031
gb|AY087924.1| Arabidopsis thaliana clone 39667 mRNA, compl... 121 6e-031
gb|CB257238.1|CB257238 38-E012742-027-007-K10-T7R MPIZ-ADIS... 95 8e-031
emb|CS061637.1| Sequence 28 from Patent WO2005028656 95 1e-030
emb|CS061610.1| Sequence 1 from Patent WO2005028656 95 1e-030
gb|AF204967.1|AF204967 Arabidopsis thaliana histone H2A (ra... 95 1e-030
emb|CS061638.1| Sequence 29 from Patent WO2005028656 95 2e-030
emb|CS061649.1| Sequence 40 from Patent WO2005028656 96 2e-030
emb|CS061646.1| Sequence 37 from Patent WO2005028656 95 2e-030
gb|AF204968.1|AF204968 Arabidopsis thaliana histone H2A (RA... 95 4e-030
gb|AV531611.1|AV531611 AV531611 Arabidopsis thaliana flower... 133 6e-030
gb|AC000106.1|F7G19 Sequence of BAC F7G19 from Arabidopsis ... 97 7e-030
gb|AV534205.1|AV534205 AV534205 Arabidopsis thaliana flower... 133 8e-030
gb|AC005388.1|T22H22 Sequence of BAC T22H22 from Arabidopsi... 97 8e-030
dbj|AP002034.1| Arabidopsis thaliana genomic DNA, chromosom... 96 4e-029
gb|CB254689.1|CB254689 62-E018438-019-009-K16-T7R MPIZ-ADIS... 98 5e-029
gb|AC079828.4|AC079828 Arabidopsis thaliana chromosome 1 BA... 95 5e-029
dbj|AB016879.1| Arabidopsis thaliana genomic DNA, chromosom... 95 6e-029
emb|AL030978.1|ATM4I22 Arabidopsis thaliana DNA chromosome ... 95 7e-029
gb|BP798753.1|BP798753 BP798753 RAFL14 Arabidopsis thaliana... 129 1e-028
gb|AV782977.1|AV782977 AV782977 RAFL5 Arabidopsis thaliana ... 108 1e-028
emb|AL161566.2|ATCHRIV66 Arabidopsis thaliana DNA chromosom... 95 2e-028
emb|BX842225.1|CNS09YCL Arabidopsis thaliana Full-length cD... 87 3e-028
gb|BP798917.1|BP798917 BP798917 RAFL14 Arabidopsis thaliana... 115 3e-028
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 97 8e-028
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 97 1e-027
gb|CW840225.1|CW840225 GT9652.Ds5.07.10.2001.ju98.588 Arabi... 84 2e-027
gb|BP823319.1|BP823319 BP823319 RAFL19 Arabidopsis thaliana... 125 2e-027
gb|BP820201.1|BP820201 BP820201 RAFL19 Arabidopsis thaliana... 81 4e-027
gb|BP827266.1|BP827266 BP827266 RAFL19 Arabidopsis thaliana... 123 6e-027
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 95 1e-026
gb|BP829032.1|BP829032 BP829032 RAFL19 Arabidopsis thaliana... 122 1e-026
gb|AV552043.1|AV552043 AV552043 Arabidopsis thaliana roots ... 115 5e-026
gb|AV534170.1|AV534170 AV534170 Arabidopsis thaliana flower... 120 8e-026
gb|BP862639.1|BP862639 BP862639 RAFL21 Arabidopsis thaliana... 120 8e-026
gb|BP804172.1|BP804172 BP804172 RAFL14 Arabidopsis thaliana... 75 3e-025
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 116 1e-024
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 116 1e-024
gb|CW844997.1|CW844997 GT11558.Ds3.07.29.2004.jx80.437 Arab... 95 3e-024
gb|BP828979.1|BP828979 BP828979 RAFL19 Arabidopsis thaliana... 114 3e-024
gb|AV530882.1|AV530882 AV530882 Arabidopsis thaliana flower... 114 5e-024
gb|N65523.1|N65523 20563 Lambda-PRL2 Arabidopsis thaliana c... 98 1e-023
gb|BP822312.1|BP822312 BP822312 RAFL19 Arabidopsis thaliana... 112 1e-023
gb|BP636266.1|BP636266 BP636266 RAFL18 Arabidopsis thaliana... 96 2e-023
gb|BP860733.1|BP860733 BP860733 RAFL21 Arabidopsis thaliana... 111 3e-023
gb|BP868852.1|BP868852 BP868852 RAFL21 Arabidopsis thaliana... 110 8e-023
gb|BP839327.1|BP839327 BP839327 RAFL19 Arabidopsis thaliana... 92 1e-022
gb|AV531745.1|AV531745 AV531745 Arabidopsis thaliana flower... 109 2e-022
gb|BP812035.1|BP812035 BP812035 RAFL19 Arabidopsis thaliana... 107 4e-022
gb|BP596405.1|BP596405 BP596405 RAFL15 Arabidopsis thaliana... 107 6e-022
gb|BP867260.1|BP867260 BP867260 RAFL21 Arabidopsis thaliana... 107 6e-022
gb|BP827049.1|BP827049 BP827049 RAFL19 Arabidopsis thaliana... 103 7e-021
>gb|AV566533.1|AV566533 AV566533 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ245d04F 3', mRNA sequence
Length = 572
Score = 184 bits (396), Expect = 4e-045
Identities = 78/103 (75%), Positives = 83/103 (80%)
Frame = +3 / -3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRSVK+GLQFPVGRIGRYLK+GRYS+RVGTGAP GNAARDNK
Sbjct: 540 VSRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNK 361
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRHVLLA+RNDEELG LL GVTIAHGGVLPNINP+LLP
Sbjct: 360 KNRIIPRHVLLAVRNDEELGTLLKGVTIAHGGVLPNINPILLP 232
Score = 86.8 bits (183), Expect(2) = 1e-021
Identities = 40/85 (47%), Positives = 45/85 (52%)
Frame = -2 / +2
Query: 478 AATAVFLGSSTGLMLGRTPPCAMVTPAXXXXXXXXXXXXXSTCRGMIRFFLLSRAAFPAN 299
AA + F G S G M G+TPPCAMVTP T RG+IRFFLLS AA PA+
Sbjct: 212 AAFSDFFGRSIGFMFGKTPPCAMVTPLSSVPSSSSFLTANRTWRGIIRFFLLSLAALPAS 391
Query: 298 XXXXXXXXXXXXXXXTGAPVPTRWE 224
TGAPVPTR+E
Sbjct: 392 SRTSAARYSRTAAR*TGAPVPTRFE 466
Score = 38.6 bits (78), Expect(2) = 1e-021
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -2 / +2
Query: 187 TGNWRPAFTERETGFFLG 134
TGN RP TERETGFFLG
Sbjct: 503 TGNCRPDLTERETGFFLG 556
>gb|CK117984.1|CK117984 208n13.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011N13208
5-PRIME, mRNA sequence
Length = 660
Score = 184 bits (396), Expect = 4e-045
Identities = 78/103 (75%), Positives = 83/103 (80%)
Frame = +3 / +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRSVK+GLQFPVGRIGRYLK+GRYS+RVGTGAP GNAARDNK
Sbjct: 126 VSRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNK 305
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRHVLLA+RNDEELG LL GVTIAHGGVLPNINP+LLP
Sbjct: 306 KNRIIPRHVLLAVRNDEELGTLLKGVTIAHGGVLPNINPILLP 434
Score = 86.8 bits (183), Expect(2) = 1e-021
Identities = 40/85 (47%), Positives = 45/85 (52%)
Frame = -2 / -3
Query: 478 AATAVFLGSSTGLMLGRTPPCAMVTPAXXXXXXXXXXXXXSTCRGMIRFFLLSRAAFPAN 299
AA + F G S G M G+TPPCAMVTP T RG+IRFFLLS AA PA+
Sbjct: 454 AAFSDFFGRSIGFMFGKTPPCAMVTPLSSVPSSSSFLTANRTWRGIIRFFLLSLAALPAS 275
Query: 298 XXXXXXXXXXXXXXXTGAPVPTRWE 224
TGAPVPTR+E
Sbjct: 274 SRTSAARYSRTAAR*TGAPVPTRFE 200
Score = 38.6 bits (78), Expect(2) = 1e-021
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -2 / -3
Query: 187 TGNWRPAFTERETGFFLG 134
TGN RP TERETGFFLG
Sbjct: 163 TGNCRPDLTERETGFFLG 110
>gb|CK120143.1|CK120143 208l11.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011L11208
5-PRIME, mRNA sequence
Length = 660
Score = 184 bits (396), Expect = 4e-045
Identities = 78/103 (75%), Positives = 83/103 (80%)
Frame = +3 / +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRSVK+GLQFPVGRIGRYLK+GRYS+RVGTGAP GNAARDNK
Sbjct: 126 VSRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNK 305
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRHVLLA+RNDEELG LL GVTIAHGGVLPNINP+LLP
Sbjct: 306 KNRIIPRHVLLAVRNDEELGTLLKGVTIAHGGVLPNINPILLP 434
Score = 86.8 bits (183), Expect(2) = 1e-021
Identities = 40/85 (47%), Positives = 45/85 (52%)
Frame = -2 / -3
Query: 478 AATAVFLGSSTGLMLGRTPPCAMVTPAXXXXXXXXXXXXXSTCRGMIRFFLLSRAAFPAN 299
AA + F G S G M G+TPPCAMVTP T RG+IRFFLLS AA PA+
Sbjct: 454 AAFSDFFGRSIGFMFGKTPPCAMVTPLSSVPSSSSFLTANRTWRGIIRFFLLSLAALPAS 275
Query: 298 XXXXXXXXXXXXXXXTGAPVPTRWE 224
TGAPVPTR+E
Sbjct: 274 SRTSAARYSRTAAR*TGAPVPTRFE 200
Score = 38.6 bits (78), Expect(2) = 1e-021
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -2 / -3
Query: 187 TGNWRPAFTERETGFFLG 134
TGN RP TERETGFFLG
Sbjct: 163 TGNCRPDLTERETGFFLG 110
>gb|AY085515.1| Arabidopsis thaliana clone 1553 mRNA, complete sequence
Length = 630
Score = 184 bits (396), Expect = 4e-045
Identities = 78/103 (75%), Positives = 83/103 (80%)
Frame = +3 / +2
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRSVK+GLQFPVGRIGRYLK+GRYS+RVGTGAP GNAARDNK
Sbjct: 128 VSRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNK 307
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRHVLLA+RNDEELG LL GVTIAHGGVLPNINP+LLP
Sbjct: 308 KNRIIPRHVLLAVRNDEELGTLLKGVTIAHGGVLPNINPILLP 436
Score = 86.8 bits (183), Expect(2) = 1e-021
Identities = 40/85 (47%), Positives = 45/85 (52%)
Frame = -2 / -1
Query: 478 AATAVFLGSSTGLMLGRTPPCAMVTPAXXXXXXXXXXXXXSTCRGMIRFFLLSRAAFPAN 299
AA + F G S G M G+TPPCAMVTP T RG+IRFFLLS AA PA+
Sbjct: 456 AAFSDFFGRSIGFMFGKTPPCAMVTPLSSVPSSSSFLTANRTWRGIIRFFLLSLAALPAS 277
Query: 298 XXXXXXXXXXXXXXXTGAPVPTRWE 224
TGAPVPTR+E
Sbjct: 276 SRTSAARYSRTAAR*TGAPVPTRFE 202
Score = 38.6 bits (78), Expect(2) = 1e-021
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -2 / -1
Query: 187 TGNWRPAFTERETGFFLG 134
TGN RP TERETGFFLG
Sbjct: 165 TGNCRPDLTERETGFFLG 112
>emb|BX833753.1|CNS09Z4Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL75ZC12 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 636
Score = 184 bits (396), Expect = 4e-045
Identities = 78/103 (75%), Positives = 83/103 (80%)
Frame = +3 / +1
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRSVK+GLQFPVGRIGRYLK+GRYS+RVGTGAP GNAARDNK
Sbjct: 106 VSRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAPVYLAAVLEYLAAEVLELSGNAARDNK 285
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRHVLLA+RNDEELG LL GVTIAHGGVLPNINP+LLP
Sbjct: 286 KNRIIPRHVLLAVRNDEELGTLLKGVTIAHGGVLPNINPILLP 414
Score = 84.5 bits (178), Expect(2) = 7e-021
Identities = 39/85 (45%), Positives = 44/85 (51%)
Frame = -2 / -2
Query: 478 AATAVFLGSSTGLMLGRTPPCAMVTPAXXXXXXXXXXXXXSTCRGMIRFFLLSRAAFPAN 299
AA + F G S G M G+TPPCAMVTP T RG+IRFFLLS AA P +
Sbjct: 434 AAFSDFFGRSIGFMFGKTPPCAMVTPLSSVPSSSSFLTANRTWRGIIRFFLLSLAALPES 255
Query: 298 XXXXXXXXXXXXXXXTGAPVPTRWE 224
TGAPVPTR+E
Sbjct: 254 SRTSAARYSRTAAR*TGAPVPTRFE 180
Score = 38.6 bits (78), Expect(2) = 7e-021
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -2 / -2
Query: 187 TGNWRPAFTERETGFFLG 134
TGN RP TERETGFFLG
Sbjct: 143 TGNCRPDLTERETGFFLG 90
>emb|CS061622.1| Sequence 13 from Patent WO2005028656
Length = 612
Score = 184 bits (396), Expect = 4e-045
Identities = 78/103 (75%), Positives = 83/103 (80%)
Frame = +3 / +1
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRSVK+GLQFPVGRIGRYLK+GRYS+RVGTGAP GNAARDNK
Sbjct: 73 VSRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNK 252
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRHVLLA+RNDEELG LL GVTIAHGGVLPNINP+LLP
Sbjct: 253 KNRIIPRHVLLAVRNDEELGTLLKGVTIAHGGVLPNINPILLP 381
Score = 86.8 bits (183), Expect(2) = 1e-021
Identities = 40/85 (47%), Positives = 45/85 (52%)
Frame = -2 / -2
Query: 478 AATAVFLGSSTGLMLGRTPPCAMVTPAXXXXXXXXXXXXXSTCRGMIRFFLLSRAAFPAN 299
AA + F G S G M G+TPPCAMVTP T RG+IRFFLLS AA PA+
Sbjct: 401 AAFSDFFGRSIGFMFGKTPPCAMVTPLSSVPSSSSFLTANRTWRGIIRFFLLSLAALPAS 222
Query: 298 XXXXXXXXXXXXXXXTGAPVPTRWE 224
TGAPVPTR+E
Sbjct: 221 SRTSAARYSRTAAR*TGAPVPTRFE 147
Score = 38.6 bits (78), Expect(2) = 1e-021
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -2 / -2
Query: 187 TGNWRPAFTERETGFFLG 134
TGN RP TERETGFFLG
Sbjct: 110 TGNCRPDLTERETGFFLG 57
>ref|NM_120334.2| Arabidopsis thaliana DNA binding AT5G02560 mRNA, complete cds
Length = 667
Score = 184 bits (396), Expect = 4e-045
Identities = 78/103 (75%), Positives = 83/103 (80%)
Frame = +3 / +2
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRSVK+GLQFPVGRIGRYLK+GRYS+RVGTGAP GNAARDNK
Sbjct: 128 VSRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNK 307
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRHVLLA+RNDEELG LL GVTIAHGGVLPNINP+LLP
Sbjct: 308 KNRIIPRHVLLAVRNDEELGTLLKGVTIAHGGVLPNINPILLP 436
Score = 86.8 bits (183), Expect(2) = 1e-021
Identities = 40/85 (47%), Positives = 45/85 (52%)
Frame = -2 / -2
Query: 478 AATAVFLGSSTGLMLGRTPPCAMVTPAXXXXXXXXXXXXXSTCRGMIRFFLLSRAAFPAN 299
AA + F G S G M G+TPPCAMVTP T RG+IRFFLLS AA PA+
Sbjct: 456 AAFSDFFGRSIGFMFGKTPPCAMVTPLSSVPSSSSFLTANRTWRGIIRFFLLSLAALPAS 277
Query: 298 XXXXXXXXXXXXXXXTGAPVPTRWE 224
TGAPVPTR+E
Sbjct: 276 SRTSAARYSRTAAR*TGAPVPTRFE 202
Score = 38.6 bits (78), Expect(2) = 1e-021
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -2 / -2
Query: 187 TGNWRPAFTERETGFFLG 134
TGN RP TERETGFFLG
Sbjct: 165 TGNCRPDLTERETGFFLG 112
>emb|BX833247.1|CNS09Z82 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL40ZD07 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 644
Score = 182 bits (393), Expect = 1e-044
Identities = 77/103 (74%), Positives = 83/103 (80%)
Frame = +3 / +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRSVK+GLQ+PVGRIGRYLK+GRYS+RVGTGAP GNAARDNK
Sbjct: 108 VSRSVKSGLQYPVGRIGRYLKKGRYSKRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNK 287
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRHVLLA+RNDEELG LL GVTIAHGGVLPNINP+LLP
Sbjct: 288 KNRIIPRHVLLAVRNDEELGTLLKGVTIAHGGVLPNINPILLP 416
>gb|BE038743.1|BE038743 AB06B11 AB Arabidopsis thaliana cDNA 5' similar to histone h2a,
mRNA sequence
Length = 710
Score = 170 bits (366), Expect = 5e-041
Identities = 73/103 (70%), Positives = 82/103 (79%)
Frame = +3 / -1
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VS+S+KAGLQFPVGRI R+LK+GRY+QR+G GAP GNAARDNK
Sbjct: 560 VSKSMKAGLQFPVGRITRFLKKGRYAQRLGGGAPVYMAAVLEYLAAEVLELAGNAARDNK 381
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
K+RIIPRH+LLAIRNDEELGKLL+GVTIAHGGVLPNIN VLLP
Sbjct: 380 KSRIIPRHLLLAIRNDEELGKLLSGVTIAHGGVLPNINSVLLP 252
>gb|AU238727.1|AU238727 AU238727 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-06-N22 5',
mRNA sequence
Length = 622
Score = 170 bits (366), Expect = 5e-041
Identities = 73/103 (70%), Positives = 82/103 (79%)
Frame = +3 / +1
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VS+S+KAGLQFPVGRI R+LK+GRY+QR+G GAP GNAARDNK
Sbjct: 142 VSKSMKAGLQFPVGRITRFLKKGRYAQRLGGGAPVYMAAVLEYLAAEVLELAGNAARDNK 321
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
K+RIIPRH+LLAIRNDEELGKLL+GVTIAHGGVLPNIN VLLP
Sbjct: 322 KSRIIPRHLLLAIRNDEELGKLLSGVTIAHGGVLPNINSVLLP 450
>gb|CF652260.1|CF652260 44-L020361-066-002-H11-SP6P MPIZ-ADIS-066 Arabidopsis thaliana cDNA
clone MPIZp2001H112Q 5-PRIME, mRNA sequence
Length = 767
Score = 170 bits (366), Expect = 5e-041
Identities = 73/103 (70%), Positives = 82/103 (79%)
Frame = +3 / +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VS+S+KAGLQFPVGRI R+LK+GRY+QR+G GAP GNAARDNK
Sbjct: 141 VSKSMKAGLQFPVGRITRFLKKGRYAQRLGGGAPVYMAAVLEYLAAEVLELAGNAARDNK 320
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
K+RIIPRH+LLAIRNDEELGKLL+GVTIAHGGVLPNIN VLLP
Sbjct: 321 KSRIIPRHLLLAIRNDEELGKLLSGVTIAHGGVLPNINSVLLP 449
>gb|AV531332.1|AV531332 AV531332 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB019f06F 3', mRNA sequence
Length = 503
Score = 170 bits (366), Expect = 5e-041
Identities = 73/103 (70%), Positives = 82/103 (79%)
Frame = +3 / +2
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VS+S+KAGLQFPVGRI R+LK+GRY+QR+G GAP GNAARDNK
Sbjct: 119 VSKSMKAGLQFPVGRITRFLKKGRYAQRLGGGAPVYMAAVLEYLAAEVLELAGNAARDNK 298
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
K+RIIPRH+LLAIRNDEELGKLL+GVTIAHGGVLPNIN VLLP
Sbjct: 299 KSRIIPRHLLLAIRNDEELGKLLSGVTIAHGGVLPNINSVLLP 427
>gb|CK119396.1|CK119396 212o08.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011O08212
5-PRIME, mRNA sequence
Length = 627
Score = 170 bits (366), Expect = 5e-041
Identities = 73/103 (70%), Positives = 82/103 (79%)
Frame = +3 / +1
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VS+S+KAGLQFPVGRI R+LK+GRY+QR+G GAP GNAARDNK
Sbjct: 133 VSKSMKAGLQFPVGRITRFLKKGRYAQRLGGGAPVYMAAVLEYLAAEVLELAGNAARDNK 312
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
K+RIIPRH+LLAIRNDEELGKLL+GVTIAHGGVLPNIN VLLP
Sbjct: 313 KSRIIPRHLLLAIRNDEELGKLLSGVTIAHGGVLPNINSVLLP 441
>gb|BT003669.1| Arabidopsis thaliana At5g59870 mRNA, complete cds
Length = 453
Score = 170 bits (366), Expect = 5e-041
Identities = 73/103 (70%), Positives = 82/103 (79%)
Frame = +3 / +1
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VS+S+KAGLQFPVGRI R+LK+GRY+QR+G GAP GNAARDNK
Sbjct: 73 VSKSMKAGLQFPVGRITRFLKKGRYAQRLGGGAPVYMAAVLEYLAAEVLELAGNAARDNK 252
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
K+RIIPRH+LLAIRNDEELGKLL+GVTIAHGGVLPNIN VLLP
Sbjct: 253 KSRIIPRHLLLAIRNDEELGKLLSGVTIAHGGVLPNINSVLLP 381
>gb|AY085948.1| Arabidopsis thaliana clone 20036 mRNA, complete sequence
Length = 649
Score = 170 bits (366), Expect = 5e-041
Identities = 73/103 (70%), Positives = 82/103 (79%)
Frame = +3 / +2
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VS+S+KAGLQFPVGRI R+LK+GRY+QR+G GAP GNAARDNK
Sbjct: 149 VSKSMKAGLQFPVGRITRFLKKGRYAQRLGGGAPVYMAAVLEYLAAEVLELAGNAARDNK 328
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
K+RIIPRH+LLAIRNDEELGKLL+GVTIAHGGVLPNIN VLLP
Sbjct: 329 KSRIIPRHLLLAIRNDEELGKLLSGVTIAHGGVLPNINSVLLP 457
>dbj|AK117890.1| Arabidopsis thaliana At5g59870 mRNA for putative histone H2A,
complete cds, clone: RAFL19-06-N22
Length = 745
Score = 170 bits (366), Expect = 5e-041
Identities = 73/103 (70%), Positives = 82/103 (79%)
Frame = +3 / +1
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VS+S+KAGLQFPVGRI R+LK+GRY+QR+G GAP GNAARDNK
Sbjct: 142 VSKSMKAGLQFPVGRITRFLKKGRYAQRLGGGAPVYMAAVLEYLAAEVLELAGNAARDNK 321
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
K+RIIPRH+LLAIRNDEELGKLL+GVTIAHGGVLPNIN VLLP
Sbjct: 322 KSRIIPRHLLLAIRNDEELGKLLSGVTIAHGGVLPNINSVLLP 450
>emb|CS061616.1| Sequence 7 from Patent WO2005028656
Length = 699
Score = 170 bits (366), Expect = 5e-041
Identities = 73/103 (70%), Positives = 82/103 (79%)
Frame = +3 / +2
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VS+S+KAGLQFPVGRI R+LK+GRY+QR+G GAP GNAARDNK
Sbjct: 149 VSKSMKAGLQFPVGRITRFLKKGRYAQRLGGGAPVYMAAVLEYLAAEVLELAGNAARDNK 328
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
K+RIIPRH+LLAIRNDEELGKLL+GVTIAHGGVLPNIN VLLP
Sbjct: 329 KSRIIPRHLLLAIRNDEELGKLLSGVTIAHGGVLPNINSVLLP 457
>ref|NM_125380.2| Arabidopsis thaliana DNA binding AT5G59870 mRNA, complete cds
Length = 750
Score = 170 bits (366), Expect = 5e-041
Identities = 73/103 (70%), Positives = 82/103 (79%)
Frame = +3 / +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VS+S+KAGLQFPVGRI R+LK+GRY+QR+G GAP GNAARDNK
Sbjct: 147 VSKSMKAGLQFPVGRITRFLKKGRYAQRLGGGAPVYMAAVLEYLAAEVLELAGNAARDNK 326
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
K+RIIPRH+LLAIRNDEELGKLL+GVTIAHGGVLPNIN VLLP
Sbjct: 327 KSRIIPRHLLLAIRNDEELGKLLSGVTIAHGGVLPNINSVLLP 455
>emb|CS061648.1| Sequence 39 from Patent WO2005028656
Length = 1733
Score = 116 bits (247), Expect(2) = 1e-040
Identities = 47/51 (92%), Positives = 49/51 (96%)
Frame = +3 / +2
Query: 306 GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
GNAARDNKKNRIIPRHVLLA+RNDEELG LL GVTIAHGGVLPNINP+LLP
Sbjct: 1286 GNAARDNKKNRIIPRHVLLAVRNDEELGTLLKGVTIAHGGVLPNINPILLP 1438
Score = 77.1 bits (162), Expect(2) = 1e-040
Identities = 31/34 (91%), Positives = 34/34 (100%)
Frame = +3 / +2
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAP 251
VSRSVK+GLQFPVGRIGRYLK+GRYS+RVGTGAP
Sbjct: 572 VSRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAP 673
>gb|BE039411.1|BE039411 AC03C02 AC Arabidopsis thaliana cDNA 5' similar to histone h2a,
mRNA sequence
Length = 694
Score = 165 bits (355), Expect = 2e-039
Identities = 72/103 (69%), Positives = 78/103 (75%)
Frame = +3 / +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VS+SVKAGLQFPVGRI RYLK+GRY+ R G+GAP GNAARDNK
Sbjct: 54 VSKSVKAGLQFPVGRIARYLKKGRYALRYGSGAPVYLAAVLEYLAAEVLELAGNAARDNK 233
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRI PRH+ LAIRNDEELG+LL GVTIA GGVLPNINPVLLP
Sbjct: 234 KNRINPRHLCLAIRNDEELGRLLHGVTIASGGVLPNINPVLLP 362
>gb|AV822264.1|AV822264 AV822264 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-04-A18 5',
mRNA sequence
Length = 645
Score = 165 bits (355), Expect = 2e-039
Identities = 72/103 (69%), Positives = 78/103 (75%)
Frame = +3 / +1
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VS+SVKAGLQFPVGRI RYLK+GRY+ R G+GAP GNAARDNK
Sbjct: 166 VSKSVKAGLQFPVGRIARYLKKGRYALRYGSGAPVYLAAVLEYLAAEVLELAGNAARDNK 345
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRI PRH+ LAIRNDEELG+LL GVTIA GGVLPNINPVLLP
Sbjct: 346 KNRINPRHLCLAIRNDEELGRLLHGVTIASGGVLPNINPVLLP 474
>gb|CK121613.1|CK121613 202g14.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011G14202
5-PRIME, mRNA sequence
Length = 682
Score = 165 bits (355), Expect = 2e-039
Identities = 72/103 (69%), Positives = 78/103 (75%)
Frame = +3 / +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VS+SVKAGLQFPVGRI RYLK+GRY+ R G+GAP GNAARDNK
Sbjct: 69 VSKSVKAGLQFPVGRIARYLKKGRYALRYGSGAPVYLAAVLEYLAAEVLELAGNAARDNK 248
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRI PRH+ LAIRNDEELG+LL GVTIA GGVLPNINPVLLP
Sbjct: 249 KNRINPRHLCLAIRNDEELGRLLHGVTIASGGVLPNINPVLLP 377
>gb|CK121628.1|CK121628 202h17.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011H17202
5-PRIME, mRNA sequence
Length = 797
Score = 165 bits (355), Expect = 2e-039
Identities = 72/103 (69%), Positives = 78/103 (75%)
Frame = +3 / +2
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VS+SVKAGLQFPVGRI RYLK+GRY+ R G+GAP GNAARDNK
Sbjct: 155 VSKSVKAGLQFPVGRIARYLKKGRYALRYGSGAPVYLAAVLEYLAAEVLELAGNAARDNK 334
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRI PRH+ LAIRNDEELG+LL GVTIA GGVLPNINPVLLP
Sbjct: 335 KNRINPRHLCLAIRNDEELGRLLHGVTIASGGVLPNINPVLLP 463
>gb|AF385711.1|AF385711 Arabidopsis thaliana AT5g27670/F15A18_130 mRNA, complete cds
Length = 759
Score = 165 bits (355), Expect = 2e-039
Identities = 72/103 (69%), Positives = 78/103 (75%)
Frame = +3 / +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VS+SVKAGLQFPVGRI RYLK+GRY+ R G+GAP GNAARDNK
Sbjct: 165 VSKSVKAGLQFPVGRIARYLKKGRYALRYGSGAPVYLAAVLEYLAAEVLELAGNAARDNK 344
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRI PRH+ LAIRNDEELG+LL GVTIA GGVLPNINPVLLP
Sbjct: 345 KNRINPRHLCLAIRNDEELGRLLHGVTIASGGVLPNINPVLLP 473
>gb|AY078019.1| Arabidopsis thaliana AT5g27670/F15A18_130 mRNA, complete cds
Length = 453
Score = 165 bits (355), Expect = 2e-039
Identities = 72/103 (69%), Positives = 78/103 (75%)
Frame = +3 / +1
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VS+SVKAGLQFPVGRI RYLK+GRY+ R G+GAP GNAARDNK
Sbjct: 76 VSKSVKAGLQFPVGRIARYLKKGRYALRYGSGAPVYLAAVLEYLAAEVLELAGNAARDNK 255
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRI PRH+ LAIRNDEELG+LL GVTIA GGVLPNINPVLLP
Sbjct: 256 KNRINPRHLCLAIRNDEELGRLLHGVTIASGGVLPNINPVLLP 384
>emb|CQ804506.1| Sequence 917 from Patent WO2004035798
Length = 453
Score = 165 bits (355), Expect = 2e-039
Identities = 72/103 (69%), Positives = 78/103 (75%)
Frame = +3 / +1
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VS+SVKAGLQFPVGRI RYLK+GRY+ R G+GAP GNAARDNK
Sbjct: 76 VSKSVKAGLQFPVGRIARYLKKGRYALRYGSGAPVYLAAVLEYLAAEVLELAGNAARDNK 255
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRI PRH+ LAIRNDEELG+LL GVTIA GGVLPNINPVLLP
Sbjct: 256 KNRINPRHLCLAIRNDEELGRLLHGVTIASGGVLPNINPVLLP 384
>emb|CS061617.1| Sequence 8 from Patent WO2005028656
Length = 759
Score = 165 bits (355), Expect = 2e-039
Identities = 72/103 (69%), Positives = 78/103 (75%)
Frame = +3 / +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VS+SVKAGLQFPVGRI RYLK+GRY+ R G+GAP GNAARDNK
Sbjct: 165 VSKSVKAGLQFPVGRIARYLKKGRYALRYGSGAPVYLAAVLEYLAAEVLELAGNAARDNK 344
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRI PRH+ LAIRNDEELG+LL GVTIA GGVLPNINPVLLP
Sbjct: 345 KNRINPRHLCLAIRNDEELGRLLHGVTIASGGVLPNINPVLLP 473
>ref|NM_122649.2| Arabidopsis thaliana DNA binding AT5G27670 mRNA, complete cds
Length = 774
Score = 165 bits (355), Expect = 2e-039
Identities = 72/103 (69%), Positives = 78/103 (75%)
Frame = +3 / +1
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VS+SVKAGLQFPVGRI RYLK+GRY+ R G+GAP GNAARDNK
Sbjct: 166 VSKSVKAGLQFPVGRIARYLKKGRYALRYGSGAPVYLAAVLEYLAAEVLELAGNAARDNK 345
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRI PRH+ LAIRNDEELG+LL GVTIA GGVLPNINPVLLP
Sbjct: 346 KNRINPRHLCLAIRNDEELGRLLHGVTIASGGVLPNINPVLLP 474
>gb|AV783757.1|AV783757 AV783757 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-12-N15 3',
mRNA sequence
Length = 689
Score = 163 bits (351), Expect = 6e-039
Identities = 71/103 (68%), Positives = 78/103 (75%)
Frame = +3 / -2
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VS+SVKAGLQFPVGRI RYL++GRY+ R G+GAP GNAARDNK
Sbjct: 589 VSKSVKAGLQFPVGRIARYLEKGRYALRYGSGAPVYLAAVLEYLAAEVLELAGNAARDNK 410
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRI PRH+ LAIRNDEELG+LL GVTIA GGVLPNINPVLLP
Sbjct: 409 KNRINPRHLCLAIRNDEELGRLLHGVTIASGGVLPNINPVLLP 281
>gb|BP560904.1|BP560904 BP560904 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-12-N15 5',
mRNA sequence
Length = 660
Score = 163 bits (351), Expect = 6e-039
Identities = 71/103 (68%), Positives = 78/103 (75%)
Frame = +3 / +1
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VS+SVKAGLQFPVGRI RYL++GRY+ R G+GAP GNAARDNK
Sbjct: 133 VSKSVKAGLQFPVGRIARYLEKGRYALRYGSGAPVYLAAVLEYLAAEVLELAGNAARDNK 312
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRI PRH+ LAIRNDEELG+LL GVTIA GGVLPNINPVLLP
Sbjct: 313 KNRINPRHLCLAIRNDEELGRLLHGVTIASGGVLPNINPVLLP 441
>emb|AL162971.1|ATT22P11 Arabidopsis thaliana DNA chromosome 5, BAC clone T22P11 (ESSA project)
Length = 96424
Score = 116 bits (247), Expect(2) = 6e-039
Identities = 47/51 (92%), Positives = 49/51 (96%)
Frame = +3 / +3
Query: 306 GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
GNAARDNKKNRIIPRHVLLA+RNDEELG LL GVTIAHGGVLPNINP+LLP
Sbjct: 57153 GNAARDNKKNRIIPRHVLLAVRNDEELGTLLKGVTIAHGGVLPNINPILLP 57305
Score = 77.1 bits (162), Expect(2) = 6e-039
Identities = 31/34 (91%), Positives = 34/34 (100%)
Frame = +3 / +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAP 251
VSRSVK+GLQFPVGRIGRYLK+GRYS+RVGTGAP
Sbjct: 56439 VSRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAP 56540
>emb|CS061642.1| Sequence 33 from Patent WO2005028656
Length = 1487
Score = 113 bits (241), Expect(2) = 1e-036
Identities = 47/51 (92%), Positives = 50/51 (98%)
Frame = +3 / +3
Query: 306 GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
GNAARDNKK+RIIPRH+LLAIRNDEELGKLL+GVTIAHGGVLPNIN VLLP
Sbjct: 891 GNAARDNKKSRIIPRHLLLAIRNDEELGKLLSGVTIAHGGVLPNINSVLLP 1043
Score = 66.1 bits (138), Expect(2) = 1e-036
Identities = 26/34 (76%), Positives = 32/34 (94%)
Frame = +3 / +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAP 251
VS+S+KAGLQFPVGRI R+LK+GRY+QR+G GAP
Sbjct: 648 VSKSMKAGLQFPVGRITRFLKKGRYAQRLGGGAP 749
>gb|AI996156.1|AI996156 701550262 A. thaliana, Columbia Col-0, inflorescence-2 Arabidopsis
thaliana cDNA clone 701550262, mRNA sequence
Length = 648
Score = 154 bits (331), Expect = 3e-036
Identities = 65/103 (63%), Positives = 75/103 (72%)
Frame = +3 / -1
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRS KAGLQFPVGRI R+LK G+Y++RVG+GAP GNAARDNK
Sbjct: 540 VSRSSKAGLQFPVGRIARFLKSGKYAERVGSGAPVYLSAVLEYLAAEVLELAGNAARDNK 361
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
K RI+PRH+ LA+RNDEEL KLL VTIA+GGVLPNI+ LLP
Sbjct: 360 KTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLP 232
>gb|CF652298.1|CF652298 46-L020577-066-004-K11-SP6P MPIZ-ADIS-066 Arabidopsis thaliana cDNA
clone MPIZp2001K114Q 5-PRIME, mRNA sequence
Length = 711
Score = 154 bits (330), Expect = 5e-036
Identities = 65/103 (63%), Positives = 74/103 (71%)
Frame = +3 / +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRS KAGLQFPVGRI R+LK G+Y++RVG GAP GNAARDNK
Sbjct: 126 VSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNK 305
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
K RI+PRH+ LA+RNDEEL KLL VTIA+GGVLPNI+ LLP
Sbjct: 306 KTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLP 434
>gb|CD531101.1|CD531101 09H10 Arabidopsis Leaf Senescence Library Arabidopsis thaliana cDNA
3', mRNA sequence
Length = 548
Score = 154 bits (330), Expect = 5e-036
Identities = 65/103 (63%), Positives = 74/103 (71%)
Frame = +3 / +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRS KAGLQFPVGRI R+LK G+Y++RVG GAP GNAARDNK
Sbjct: 114 VSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNK 293
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
K RI+PRH+ LA+RNDEEL KLL VTIA+GGVLPNI+ LLP
Sbjct: 294 KTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLP 422
>gb|AF412092.1|AF412092 Arabidopsis thaliana At1g08880/F7G19_24 mRNA, complete cds
Length = 687
Score = 154 bits (330), Expect = 5e-036
Identities = 65/103 (63%), Positives = 74/103 (71%)
Frame = +3 / +1
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRS KAGLQFPVGRI R+LK G+Y++RVG GAP GNAARDNK
Sbjct: 169 VSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNK 348
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
K RI+PRH+ LA+RNDEEL KLL VTIA+GGVLPNI+ LLP
Sbjct: 349 KTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLP 477
>gb|AY093975.1| Arabidopsis thaliana At1g08880/F7G19_24 mRNA, complete cds
Length = 429
Score = 154 bits (330), Expect = 5e-036
Identities = 65/103 (63%), Positives = 74/103 (71%)
Frame = +3 / +1
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRS KAGLQFPVGRI R+LK G+Y++RVG GAP GNAARDNK
Sbjct: 67 VSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNK 246
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
K RI+PRH+ LA+RNDEEL KLL VTIA+GGVLPNI+ LLP
Sbjct: 247 KTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLP 375
>emb|BX818384.1|CNS0ACP9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL76ZC11 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 660
Score = 154 bits (330), Expect = 5e-036
Identities = 65/103 (63%), Positives = 74/103 (71%)
Frame = +3 / +2
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRS KAGLQFPVGRI R+LK G+Y++RVG GAP GNAARDNK
Sbjct: 140 VSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNK 319
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
K RI+PRH+ LA+RNDEEL KLL VTIA+GGVLPNI+ LLP
Sbjct: 320 KTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLP 448
>emb|CQ803632.1| Sequence 43 from Patent WO2004035798
Length = 429
Score = 154 bits (330), Expect = 5e-036
Identities = 65/103 (63%), Positives = 74/103 (71%)
Frame = +3 / +1
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRS KAGLQFPVGRI R+LK G+Y++RVG GAP GNAARDNK
Sbjct: 67 VSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNK 246
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
K RI+PRH+ LA+RNDEEL KLL VTIA+GGVLPNI+ LLP
Sbjct: 247 KTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLP 375
>emb|CS061615.1| Sequence 6 from Patent WO2005028656
Length = 739
Score = 154 bits (330), Expect = 5e-036
Identities = 65/103 (63%), Positives = 74/103 (71%)
Frame = +3 / +1
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRS KAGLQFPVGRI R+LK G+Y++RVG GAP GNAARDNK
Sbjct: 199 VSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNK 378
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
K RI+PRH+ LA+RNDEEL KLL VTIA+GGVLPNI+ LLP
Sbjct: 379 KTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLP 507
>ref|NM_100760.2| Arabidopsis thaliana DNA binding AT1G08880 mRNA, complete cds
Length = 725
Score = 154 bits (330), Expect = 5e-036
Identities = 65/103 (63%), Positives = 74/103 (71%)
Frame = +3 / +1
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRS KAGLQFPVGRI R+LK G+Y++RVG GAP GNAARDNK
Sbjct: 172 VSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNK 351
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
K RI+PRH+ LA+RNDEEL KLL VTIA+GGVLPNI+ LLP
Sbjct: 352 KTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLP 480
>gb|AV823082.1|AV823082 AV823082 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-15-C13 5',
mRNA sequence
Length = 661
Score = 153 bits (329), Expect = 7e-036
Identities = 65/103 (63%), Positives = 74/103 (71%)
Frame = +3 / +2
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRS KAGLQFPVGRI R+LK G+Y++RVG GAP GNAARDNK
Sbjct: 149 VSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNK 328
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
K RI+PRH+ LA+RNDEEL KLL VTIA+GGVLPNI+ LLP
Sbjct: 329 KTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLP 457
>gb|AV533421.1|AV533421 AV533421 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB061c06F 3', mRNA sequence
Length = 544
Score = 153 bits (329), Expect = 7e-036
Identities = 65/103 (63%), Positives = 74/103 (71%)
Frame = +3 / -2
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRS KAGLQFPVGRI R+LK G+Y++RVG GAP GNAARDNK
Sbjct: 504 VSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNK 325
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
K RI+PRH+ LA+RNDEEL KLL VTIA+GGVLPNI+ LLP
Sbjct: 324 KTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLP 196
>gb|AF411788.1|AF411788 Arabidopsis thaliana At1g54690/T22H22_12 mRNA, complete cds
Length = 807
Score = 153 bits (329), Expect = 7e-036
Identities = 65/103 (63%), Positives = 74/103 (71%)
Frame = +3 / +1
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRS KAGLQFPVGRI R+LK G+Y++RVG GAP GNAARDNK
Sbjct: 148 VSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNK 327
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
K RI+PRH+ LA+RNDEEL KLL VTIA+GGVLPNI+ LLP
Sbjct: 328 KTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLP 456
>gb|AY094023.1| Arabidopsis thaliana At1g54690/T22H22_12 mRNA, complete cds
Length = 429
Score = 153 bits (329), Expect = 7e-036
Identities = 65/103 (63%), Positives = 74/103 (71%)
Frame = +3 / +1
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRS KAGLQFPVGRI R+LK G+Y++RVG GAP GNAARDNK
Sbjct: 67 VSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNK 246
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
K RI+PRH+ LA+RNDEEL KLL VTIA+GGVLPNI+ LLP
Sbjct: 247 KTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLP 375
>gb|AY085671.1| Arabidopsis thaliana clone 16879 mRNA, complete sequence
Length = 623
Score = 153 bits (329), Expect = 7e-036
Identities = 65/103 (63%), Positives = 74/103 (71%)
Frame = +3 / +1
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRS KAGLQFPVGRI R+LK G+Y++RVG GAP GNAARDNK
Sbjct: 148 VSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNK 327
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
K RI+PRH+ LA+RNDEEL KLL VTIA+GGVLPNI+ LLP
Sbjct: 328 KTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLP 456
>emb|BX817490.1|CNS0AEEH Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL26ZC07 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 605
Score = 153 bits (329), Expect = 7e-036
Identities = 65/103 (63%), Positives = 74/103 (71%)
Frame = +3 / +2
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRS KAGLQFPVGRI R+LK G+Y++RVG GAP GNAARDNK
Sbjct: 128 VSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNK 307
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
K RI+PRH+ LA+RNDEEL KLL VTIA+GGVLPNI+ LLP
Sbjct: 308 KTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLP 436
>emb|CS061613.1| Sequence 4 from Patent WO2005028656
Length = 801
Score = 153 bits (329), Expect = 7e-036
Identities = 65/103 (63%), Positives = 74/103 (71%)
Frame = +3 / +1
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRS KAGLQFPVGRI R+LK G+Y++RVG GAP GNAARDNK
Sbjct: 148 VSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNK 327
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
K RI+PRH+ LA+RNDEEL KLL VTIA+GGVLPNI+ LLP
Sbjct: 328 KTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLP 456
>ref|NM_104344.2| Arabidopsis thaliana DNA binding AT1G54690 mRNA, complete cds
Length = 801
Score = 153 bits (329), Expect = 7e-036
Identities = 65/103 (63%), Positives = 74/103 (71%)
Frame = +3 / +1
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRS KAGLQFPVGRI R+LK G+Y++RVG GAP GNAARDNK
Sbjct: 148 VSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNK 327
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
K RI+PRH+ LA+RNDEEL KLL VTIA+GGVLPNI+ LLP
Sbjct: 328 KTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLP 456
>emb|BX818184.1|CNS0ACP1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL65ZC10 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 688
Score = 151 bits (324), Expect = 3e-035
Identities = 64/103 (62%), Positives = 73/103 (70%)
Frame = +3 / +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRS KAGLQFPVGRI R+LK G+Y++RVG GAP GNAARDNK
Sbjct: 135 VSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNK 314
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
K RI+PRH+ LA+RNDEEL KLL V IA+GGVLPNI+ LLP
Sbjct: 315 KTRIVPRHIQLAVRNDEELSKLLGSVKIANGGVLPNIHQTLLP 443
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,140,576,634
Number of Sequences: 1013581
Number of extensions: 12742510
Number of successful extensions: 145899
Number of sequences better than 1.0e-020: 186
length of database: 302,980,290
effective HSP length: 56
effective length of database: 246,219,754
effective search space used: 58846521206
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)