TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2521459.2.4
(760 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BT005306.1| Arabidopsis thaliana At1g69370 mRNA, complet... 315 1e-084
dbj|AK117860.1| Arabidopsis thaliana At1g69370 mRNA for put... 315 1e-084
ref|NM_105604.2| Arabidopsis thaliana CM3 (CHORISMATE MUTAS... 315 1e-084
gb|AF131219.1|AF131219 Arabidopsis thaliana chorismate muta... 308 1e-082
emb|AX464576.1| Sequence 4 from Patent WO0202798 308 1e-082
emb|AX464582.1| Sequence 10 from Patent WO0202798 308 1e-082
gb|AY089156.1| Arabidopsis thaliana clone 39613 mRNA, compl... 272 5e-075
emb|AX464574.1| Sequence 2 from Patent WO0202798 273 4e-074
emb|AX464580.1| Sequence 8 from Patent WO0202798 273 4e-074
emb|Z26519.1|ATCHMUT A.thaliana mRNA for chorismate mutase 273 4e-074
ref|NM_113844.3| Arabidopsis thaliana CM1; chorismate mutas... 272 7e-074
emb|AX506042.1| Sequence 737 from Patent WO0216655 272 7e-074
emb|BX822129.1|CNS0A727 Arabidopsis thaliana Full-length cD... 271 2e-073
emb|BX824460.1|CNS0A6WL Arabidopsis thaliana Full-length cD... 270 4e-073
gb|BX840398.1|BX840398 BX840398 Arabidopsis thaliana Hormon... 268 1e-070
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 109 3e-068
gb|AC073178.9|AC073178 Arabidopsis thaliana chromosome 1 BA... 109 3e-068
gb|AC018364.5|AC018364 Arabidopsis thaliana chromosome 1 BA... 109 3e-068
gb|BX839097.1|BX839097 BX839097 Arabidopsis thaliana Adult ... 251 2e-065
gb|AY065238.1| Arabidopsis thaliana putative chorismate mut... 214 1e-057
ref|NM_121125.2| Arabidopsis thaliana ATCM2; chorismate mut... 214 1e-057
emb|AX343933.1| Sequence 3 from Patent WO0200901 214 1e-057
emb|AX464575.1| Sequence 3 from Patent WO0202798 214 1e-057
emb|AX464581.1| Sequence 9 from Patent WO0202798 214 1e-057
gb|L47355.1| Arabidopsis thaliana chorismate mutase mRNA, c... 214 1e-057
gb|AY133840.1| Arabidopsis thaliana clone U18739 putative c... 214 1e-057
emb|AX506277.1| Sequence 972 from Patent WO0216655 214 1e-057
gb|AV541889.1|AV541889 AV541889 Arabidopsis thaliana roots ... 210 6e-053
emb|AX464577.1| Sequence 5 from Patent WO0202798 86 3e-049
emb|AJ242647.1|ATH242647 Arabidopsis thaliana CM1 gene for ... 86 3e-049
dbj|AB026657.1| Arabidopsis thaliana genomic DNA, chromosom... 89 9e-047
emb|AL365234.1|ATT30N20 Arabidopsis thaliana DNA chromosome... 71 2e-042
emb|AJ242648.1|ATH242648 Arabidopsis thaliana CM2 gene for ... 71 2e-042
emb|AX464578.1| Sequence 6 from Patent WO0202798 71 2e-042
gb|BX840350.1|BX840350 BX840350 Arabidopsis thaliana Hormon... 138 5e-035
gb|AI995910.1|AI995910 701549173 A. thaliana, Columbia Col-... 87 8e-030
gb|T46455.1|T46455 9718 Lambda-PRL2 Arabidopsis thaliana cD... 129 1e-029
gb|AW004329.1|AW004329 701956468 A. thaliana, mixed source ... 105 4e-024
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 109 1e-022
gb|BP793254.1|BP793254 BP793254 RAFL7 Arabidopsis thaliana ... 104 4e-021
>gb|BT005306.1| Arabidopsis thaliana At1g69370 mRNA, complete cds
Length = 951
Score = 315 bits (682), Expect = 1e-084
Identities = 130/188 (69%), Positives = 150/188 (79%)
Frame = -3 / +1
Query: 752 ETEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDEL 573
ETEKLHA+V RYK PDEHPFF + LPEP LPP+QYP+VLH A+SININK++W MYF L
Sbjct: 367 ETEKLHAKVDRYKSPDEHPFFPQCLPEPILPPIQYPQVLHRCAESININKKVWNMYFKHL 546
Query: 572 LPRLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQ 393
LPRLVK G DGN GS+ALCDT CLQ LS+RIH+GKFVAEAKF+E+P AY AI QDR Q
Sbjct: 547 LPRLVKPGDDGNCGSAALCDTMCLQILSKRIHFGKFVAEAKFRENPAAYETAIKEQDRTQ 726
Query: 392 LMNLLTYETVERAIEHRVEAKAKIFGQEVNIGVEDNGSPPVYKIVPSLVAELYSYRIMPL 213
LM LLTYETVE ++ RVE KA+IFGQ++ I + + P YKI PSLVA+LY RIMPL
Sbjct: 727 LMQLLTYETVEEVVKKRVEIKARIFGQDITINDPETEADPSYKIQPSLVAKLYGERIMPL 906
Query: 212 TKEVQIAY 189
TKEVQI Y
Sbjct: 907 TKEVQIEY 930
Score = 217 bits (469), Expect = 3e-055
Identities = 115/194 (59%), Positives = 130/194 (67%)
Frame = +1 / -2
Query: 172 SSLLSKYAI*TSLVSGMIL*LYSSATKLGTILYTGGLPLSSTPMFTSCPKILALASTLCS 351
SSLLSKY+I TS V GMIL S ATKLG IL G +S + + S PKILAL STL
Sbjct: 947 SSLLSKYSIWTSFVRGMILSP*SFATKLGCIL*EGSASVSGSLIVMS*PKILALISTLFL 768
Query: 352 IARSTVSYVRRFMS*SRSWAIMAGV*ASGDS*NLASATNFP*WILLESACKQVVSQRALD 531
STVSYVR +S RS +++A *A+G S NLASATN P IL ES CK +VSQRA +
Sbjct: 767 TTSSTVSYVRSCISCVRSCSLIAVS*AAGFSRNLASATNLPK*ILFESICKHIVSQRAAE 588
Query: 532 PALPSLPSFTNLGRSSSKYIFQISLLILIESAMGCKTLGYCIGGNRGSGRSLEKKGCSSG 711
P LPS P T+LGR KYIF LL+ I+SA CKT GY IGG GSG+ KKGCSSG
Sbjct: 587 PQLPSSPGLTSLGRRCLKYIFHTFLLMFIDSAQRCKTCGY*IGGRIGSGKHCGKKGCSSG 408
Query: 712 PLYLPTCAWSFSVS 753
LYL T A SFSVS
Sbjct: 407 LLYLSTFA*SFSVS 366
Score = 111 bits (236), Expect = 4e-023
Identities = 63/194 (32%), Positives = 100/194 (51%)
Frame = +3 / -1
Query: 171 IQPPKQIRDLNLFG*RHDSVAVQLGDQARNDLVHRWAAVVLHTDVHLLPEDLGFGLHPVF 350
IQ KQ+ +L+ HD +++ + AR V R + + ++L ++ GF L+ +
Sbjct: 948 IQSSKQVLNLDFLCEGHDPFSIEFCN*ARLYFVGRISFSFWVVNRYVLTKNSGFDLNSLL 769
Query: 351 DSTLHRFICEKVHELITVLGYYGWRVSFRGLLKLGLCHKLPIVDPSGECLQAGCVXXXXX 530
D +RF+ K+H+L VL + + R KLG +K V+ + LQ CV
Sbjct: 768 DYFFNRFVR*KLHQLCPVLFFDSCFIGSRIFTKLGFSNKFTKVNSL*KYLQTHCVTESS* 589
Query: 531 XXXXXXXFFHQSWKKFIKIHFPNLFVDIDRISNGMQNPWVLHRWQPGLRQILGKERVLIW 710
+ QS +K +IH P+L VD+ R MQN WVL+R + RQ L ++ +LI
Sbjct: 588 TTITVIPWLDQSGEKVFEIHIPHLLVDVYRFGATMQNLWVLNRRKDRFRQALREKGMLIR 409
Query: 711 ALVSPNLCMELFSF 752
LV +LC++LFSF
Sbjct: 408 TLVPVHLCVKLFSF 367
>dbj|AK117860.1| Arabidopsis thaliana At1g69370 mRNA for putative chorismate mutase,
complete cds, clone: RAFL19-02-D09
Length = 1143
Score = 315 bits (682), Expect = 1e-084
Identities = 130/188 (69%), Positives = 150/188 (79%)
Frame = -3 / +2
Query: 752 ETEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDEL 573
ETEKLHA+V RYK PDEHPFF + LPEP LPP+QYP+VLH A+SININK++W MYF L
Sbjct: 383 ETEKLHAKVDRYKSPDEHPFFPQCLPEPILPPIQYPQVLHRCAESININKKVWNMYFKHL 562
Query: 572 LPRLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQ 393
LPRLVK G DGN GS+ALCDT CLQ LS+RIH+GKFVAEAKF+E+P AY AI QDR Q
Sbjct: 563 LPRLVKPGDDGNCGSAALCDTMCLQILSKRIHFGKFVAEAKFRENPAAYETAIKEQDRTQ 742
Query: 392 LMNLLTYETVERAIEHRVEAKAKIFGQEVNIGVEDNGSPPVYKIVPSLVAELYSYRIMPL 213
LM LLTYETVE ++ RVE KA+IFGQ++ I + + P YKI PSLVA+LY RIMPL
Sbjct: 743 LMQLLTYETVEEVVKKRVEIKARIFGQDITINDPETEADPSYKIQPSLVAKLYGERIMPL 922
Query: 212 TKEVQIAY 189
TKEVQI Y
Sbjct: 923 TKEVQIEY 946
Score = 217 bits (469), Expect = 3e-055
Identities = 115/194 (59%), Positives = 130/194 (67%)
Frame = +1 / -1
Query: 172 SSLLSKYAI*TSLVSGMIL*LYSSATKLGTILYTGGLPLSSTPMFTSCPKILALASTLCS 351
SSLLSKY+I TS V GMIL S ATKLG IL G +S + + S PKILAL STL
Sbjct: 963 SSLLSKYSIWTSFVRGMILSP*SFATKLGCIL*EGSASVSGSLIVMS*PKILALISTLFL 784
Query: 352 IARSTVSYVRRFMS*SRSWAIMAGV*ASGDS*NLASATNFP*WILLESACKQVVSQRALD 531
STVSYVR +S RS +++A *A+G S NLASATN P IL ES CK +VSQRA +
Sbjct: 783 TTSSTVSYVRSCISCVRSCSLIAVS*AAGFSRNLASATNLPK*ILFESICKHIVSQRAAE 604
Query: 532 PALPSLPSFTNLGRSSSKYIFQISLLILIESAMGCKTLGYCIGGNRGSGRSLEKKGCSSG 711
P LPS P T+LGR KYIF LL+ I+SA CKT GY IGG GSG+ KKGCSSG
Sbjct: 603 PQLPSSPGLTSLGRRCLKYIFHTFLLMFIDSAQRCKTCGY*IGGRIGSGKHCGKKGCSSG 424
Query: 712 PLYLPTCAWSFSVS 753
LYL T A SFSVS
Sbjct: 423 LLYLSTFA*SFSVS 382
Score = 111 bits (236), Expect = 4e-023
Identities = 63/194 (32%), Positives = 100/194 (51%)
Frame = +3 / -3
Query: 171 IQPPKQIRDLNLFG*RHDSVAVQLGDQARNDLVHRWAAVVLHTDVHLLPEDLGFGLHPVF 350
IQ KQ+ +L+ HD +++ + AR V R + + ++L ++ GF L+ +
Sbjct: 964 IQSSKQVLNLDFLCEGHDPFSIEFCN*ARLYFVGRISFSFWVVNRYVLTKNSGFDLNSLL 785
Query: 351 DSTLHRFICEKVHELITVLGYYGWRVSFRGLLKLGLCHKLPIVDPSGECLQAGCVXXXXX 530
D +RF+ K+H+L VL + + R KLG +K V+ + LQ CV
Sbjct: 784 DYFFNRFVR*KLHQLCPVLFFDSCFIGSRIFTKLGFSNKFTKVNSL*KYLQTHCVTESS* 605
Query: 531 XXXXXXXFFHQSWKKFIKIHFPNLFVDIDRISNGMQNPWVLHRWQPGLRQILGKERVLIW 710
+ QS +K +IH P+L VD+ R MQN WVL+R + RQ L ++ +LI
Sbjct: 604 TTITVIPWLDQSGEKVFEIHIPHLLVDVYRFGATMQNLWVLNRRKDRFRQALREKGMLIR 425
Query: 711 ALVSPNLCMELFSF 752
LV +LC++LFSF
Sbjct: 424 TLVPVHLCVKLFSF 383
>ref|NM_105604.2| Arabidopsis thaliana CM3 (CHORISMATE MUTASE 3); chorismate mutase
AT1G69370 (CM3) mRNA, complete cds
Length = 1261
Score = 315 bits (682), Expect = 1e-084
Identities = 130/188 (69%), Positives = 150/188 (79%)
Frame = -3 / +2
Query: 752 ETEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDEL 573
ETEKLHA+V RYK PDEHPFF + LPEP LPP+QYP+VLH A+SININK++W MYF L
Sbjct: 509 ETEKLHAKVDRYKSPDEHPFFPQCLPEPILPPIQYPQVLHRCAESININKKVWNMYFKHL 688
Query: 572 LPRLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQ 393
LPRLVK G DGN GS+ALCDT CLQ LS+RIH+GKFVAEAKF+E+P AY AI QDR Q
Sbjct: 689 LPRLVKPGDDGNCGSAALCDTMCLQILSKRIHFGKFVAEAKFRENPAAYETAIKEQDRTQ 868
Query: 392 LMNLLTYETVERAIEHRVEAKAKIFGQEVNIGVEDNGSPPVYKIVPSLVAELYSYRIMPL 213
LM LLTYETVE ++ RVE KA+IFGQ++ I + + P YKI PSLVA+LY RIMPL
Sbjct: 869 LMQLLTYETVEEVVKKRVEIKARIFGQDITINDPETEADPSYKIQPSLVAKLYGERIMPL 1048
Query: 212 TKEVQIAY 189
TKEVQI Y
Sbjct: 1049 TKEVQIEY 1072
Score = 217 bits (469), Expect = 3e-055
Identities = 115/194 (59%), Positives = 130/194 (67%)
Frame = +1 / -2
Query: 172 SSLLSKYAI*TSLVSGMIL*LYSSATKLGTILYTGGLPLSSTPMFTSCPKILALASTLCS 351
SSLLSKY+I TS V GMIL S ATKLG IL G +S + + S PKILAL STL
Sbjct: 1089 SSLLSKYSIWTSFVRGMILSP*SFATKLGCIL*EGSASVSGSLIVMS*PKILALISTLFL 910
Query: 352 IARSTVSYVRRFMS*SRSWAIMAGV*ASGDS*NLASATNFP*WILLESACKQVVSQRALD 531
STVSYVR +S RS +++A *A+G S NLASATN P IL ES CK +VSQRA +
Sbjct: 909 TTSSTVSYVRSCISCVRSCSLIAVS*AAGFSRNLASATNLPK*ILFESICKHIVSQRAAE 730
Query: 532 PALPSLPSFTNLGRSSSKYIFQISLLILIESAMGCKTLGYCIGGNRGSGRSLEKKGCSSG 711
P LPS P T+LGR KYIF LL+ I+SA CKT GY IGG GSG+ KKGCSSG
Sbjct: 729 PQLPSSPGLTSLGRRCLKYIFHTFLLMFIDSAQRCKTCGY*IGGRIGSGKHCGKKGCSSG 550
Query: 712 PLYLPTCAWSFSVS 753
LYL T A SFSVS
Sbjct: 549 LLYLSTFA*SFSVS 508
Score = 111 bits (236), Expect = 4e-023
Identities = 63/194 (32%), Positives = 100/194 (51%)
Frame = +3 / -1
Query: 171 IQPPKQIRDLNLFG*RHDSVAVQLGDQARNDLVHRWAAVVLHTDVHLLPEDLGFGLHPVF 350
IQ KQ+ +L+ HD +++ + AR V R + + ++L ++ GF L+ +
Sbjct: 1090 IQSSKQVLNLDFLCEGHDPFSIEFCN*ARLYFVGRISFSFWVVNRYVLTKNSGFDLNSLL 911
Query: 351 DSTLHRFICEKVHELITVLGYYGWRVSFRGLLKLGLCHKLPIVDPSGECLQAGCVXXXXX 530
D +RF+ K+H+L VL + + R KLG +K V+ + LQ CV
Sbjct: 910 DYFFNRFVR*KLHQLCPVLFFDSCFIGSRIFTKLGFSNKFTKVNSL*KYLQTHCVTESS* 731
Query: 531 XXXXXXXFFHQSWKKFIKIHFPNLFVDIDRISNGMQNPWVLHRWQPGLRQILGKERVLIW 710
+ QS +K +IH P+L VD+ R MQN WVL+R + RQ L ++ +LI
Sbjct: 730 TTITVIPWLDQSGEKVFEIHIPHLLVDVYRFGATMQNLWVLNRRKDRFRQALWEKGMLIR 551
Query: 711 ALVSPNLCMELFSF 752
LV +LC++LFSF
Sbjct: 550 TLVPVHLCVKLFSF 509
>gb|AF131219.1|AF131219 Arabidopsis thaliana chorismate mutase 3 (CM3) mRNA, complete cds
Length = 1217
Score = 308 bits (667), Expect = 1e-082
Identities = 128/188 (68%), Positives = 148/188 (78%)
Frame = -3 / +2
Query: 752 ETEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDEL 573
ETEKLHA+V RYK PDEHPFF + LPEP LPP+QYP+VLH A+SININK++W MYF L
Sbjct: 509 ETEKLHAKVDRYKSPDEHPFFPQCLPEPILPPIQYPQVLHRCAESININKKVWNMYFKHL 688
Query: 572 LPRLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQ 393
LPRLVK G DGN GS+ALCDT CLQ LS+RIH KFVA+AKF+E+P AY AI QDR Q
Sbjct: 689 LPRLVKPGDDGNCGSAALCDTMCLQILSKRIHLRKFVADAKFRENPAAYETAIKEQDRTQ 868
Query: 392 LMNLLTYETVERAIEHRVEAKAKIFGQEVNIGVEDNGSPPVYKIVPSLVAELYSYRIMPL 213
LM LLTYETVE ++ RVE KA+IFGQ++ I + + P YKI PSLVA+LY RIMPL
Sbjct: 869 LMQLLTYETVEEVVKKRVEIKARIFGQDITINDPETEADPSYKIQPSLVAKLYGERIMPL 1048
Query: 212 TKEVQIAY 189
TKEVQI Y
Sbjct: 1049 TKEVQIEY 1072
Score = 213 bits (460), Expect = 5e-054
Identities = 114/194 (58%), Positives = 129/194 (66%)
Frame = +1 / -3
Query: 172 SSLLSKYAI*TSLVSGMIL*LYSSATKLGTILYTGGLPLSSTPMFTSCPKILALASTLCS 351
SSLLSKY+I TS V GMIL S ATKLG IL G +S + + S PKILAL STL
Sbjct: 1089 SSLLSKYSIWTSFVRGMILSP*SFATKLGCIL*EGSASVSGSLIVMS*PKILALISTLFL 910
Query: 352 IARSTVSYVRRFMS*SRSWAIMAGV*ASGDS*NLASATNFP*WILLESACKQVVSQRALD 531
STVSYVR +S RS +++A *A+G S NLASATN IL ES CK +VSQRA +
Sbjct: 909 TTSSTVSYVRSCISCVRSCSLIAVS*AAGFSRNLASATNLRK*ILFESICKHIVSQRAAE 730
Query: 532 PALPSLPSFTNLGRSSSKYIFQISLLILIESAMGCKTLGYCIGGNRGSGRSLEKKGCSSG 711
P LPS P T+LGR KYIF LL+ I+SA CKT GY IGG GSG+ KKGCSSG
Sbjct: 729 PQLPSSPGLTSLGRRCLKYIFHTFLLMFIDSAQRCKTCGY*IGGRIGSGKHCGKKGCSSG 550
Query: 712 PLYLPTCAWSFSVS 753
LYL T A SFSVS
Sbjct: 549 LLYLSTFA*SFSVS 508
Score = 111 bits (237), Expect = 3e-023
Identities = 63/194 (32%), Positives = 101/194 (52%)
Frame = +3 / -2
Query: 171 IQPPKQIRDLNLFG*RHDSVAVQLGDQARNDLVHRWAAVVLHTDVHLLPEDLGFGLHPVF 350
IQ KQ+ +L+ HD +++ + AR V R + + ++L ++ GF L+ +
Sbjct: 1090 IQSSKQVLNLDFLCEGHDPFSIEFCN*ARLYFVGRISFSFWVVNRYVLTKNSGFDLNSLL 911
Query: 351 DSTLHRFICEKVHELITVLGYYGWRVSFRGLLKLGLCHKLPIVDPSGECLQAGCVXXXXX 530
D +RF+ K+H+L VL + + R KLG+ +K V+ + LQ CV
Sbjct: 910 DYFFNRFVR*KLHQLCPVLFFDSCFIGSRIFTKLGVSNKFTQVNSL*KYLQTHCVTESS* 731
Query: 531 XXXXXXXFFHQSWKKFIKIHFPNLFVDIDRISNGMQNPWVLHRWQPGLRQILGKERVLIW 710
+ QS +K +IH P+L VD+ R MQN WVL+R + RQ L ++ +LI
Sbjct: 730 TTITVIPWLDQSGEKVFEIHIPHLLVDVYRFGATMQNLWVLNRRKDRFRQALWEKGMLIR 551
Query: 711 ALVSPNLCMELFSF 752
LV +LC++LFSF
Sbjct: 550 TLVPVHLCVKLFSF 509
>emb|AX464576.1| Sequence 4 from Patent WO0202798
Length = 1217
Score = 308 bits (667), Expect = 1e-082
Identities = 128/188 (68%), Positives = 148/188 (78%)
Frame = -3 / +2
Query: 752 ETEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDEL 573
ETEKLHA+V RYK PDEHPFF + LPEP LPP+QYP+VLH A+SININK++W MYF L
Sbjct: 509 ETEKLHAKVDRYKSPDEHPFFPQCLPEPILPPIQYPQVLHRCAESININKKVWNMYFKHL 688
Query: 572 LPRLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQ 393
LPRLVK G DGN GS+ALCDT CLQ LS+RIH KFVA+AKF+E+P AY AI QDR Q
Sbjct: 689 LPRLVKPGDDGNCGSAALCDTMCLQILSKRIHLRKFVADAKFRENPAAYETAIKEQDRTQ 868
Query: 392 LMNLLTYETVERAIEHRVEAKAKIFGQEVNIGVEDNGSPPVYKIVPSLVAELYSYRIMPL 213
LM LLTYETVE ++ RVE KA+IFGQ++ I + + P YKI PSLVA+LY RIMPL
Sbjct: 869 LMQLLTYETVEEVVKKRVEIKARIFGQDITINDPETEADPSYKIQPSLVAKLYGERIMPL 1048
Query: 212 TKEVQIAY 189
TKEVQI Y
Sbjct: 1049 TKEVQIEY 1072
Score = 213 bits (460), Expect = 5e-054
Identities = 114/194 (58%), Positives = 129/194 (66%)
Frame = +1 / -3
Query: 172 SSLLSKYAI*TSLVSGMIL*LYSSATKLGTILYTGGLPLSSTPMFTSCPKILALASTLCS 351
SSLLSKY+I TS V GMIL S ATKLG IL G +S + + S PKILAL STL
Sbjct: 1089 SSLLSKYSIWTSFVRGMILSP*SFATKLGCIL*EGSASVSGSLIVMS*PKILALISTLFL 910
Query: 352 IARSTVSYVRRFMS*SRSWAIMAGV*ASGDS*NLASATNFP*WILLESACKQVVSQRALD 531
STVSYVR +S RS +++A *A+G S NLASATN IL ES CK +VSQRA +
Sbjct: 909 TTSSTVSYVRSCISCVRSCSLIAVS*AAGFSRNLASATNLRK*ILFESICKHIVSQRAAE 730
Query: 532 PALPSLPSFTNLGRSSSKYIFQISLLILIESAMGCKTLGYCIGGNRGSGRSLEKKGCSSG 711
P LPS P T+LGR KYIF LL+ I+SA CKT GY IGG GSG+ KKGCSSG
Sbjct: 729 PQLPSSPGLTSLGRRCLKYIFHTFLLMFIDSAQRCKTCGY*IGGRIGSGKHCGKKGCSSG 550
Query: 712 PLYLPTCAWSFSVS 753
LYL T A SFSVS
Sbjct: 549 LLYLSTFA*SFSVS 508
Score = 111 bits (237), Expect = 3e-023
Identities = 63/194 (32%), Positives = 101/194 (52%)
Frame = +3 / -2
Query: 171 IQPPKQIRDLNLFG*RHDSVAVQLGDQARNDLVHRWAAVVLHTDVHLLPEDLGFGLHPVF 350
IQ KQ+ +L+ HD +++ + AR V R + + ++L ++ GF L+ +
Sbjct: 1090 IQSSKQVLNLDFLCEGHDPFSIEFCN*ARLYFVGRISFSFWVVNRYVLTKNSGFDLNSLL 911
Query: 351 DSTLHRFICEKVHELITVLGYYGWRVSFRGLLKLGLCHKLPIVDPSGECLQAGCVXXXXX 530
D +RF+ K+H+L VL + + R KLG+ +K V+ + LQ CV
Sbjct: 910 DYFFNRFVR*KLHQLCPVLFFDSCFIGSRIFTKLGVSNKFTQVNSL*KYLQTHCVTESS* 731
Query: 531 XXXXXXXFFHQSWKKFIKIHFPNLFVDIDRISNGMQNPWVLHRWQPGLRQILGKERVLIW 710
+ QS +K +IH P+L VD+ R MQN WVL+R + RQ L ++ +LI
Sbjct: 730 TTITVIPWLDQSGEKVFEIHIPHLLVDVYRFGATMQNLWVLNRRKDRFRQALWEKGMLIR 551
Query: 711 ALVSPNLCMELFSF 752
LV +LC++LFSF
Sbjct: 550 TLVPVHLCVKLFSF 509
>emb|AX464582.1| Sequence 10 from Patent WO0202798
Length = 1217
Score = 308 bits (667), Expect = 1e-082
Identities = 128/188 (68%), Positives = 148/188 (78%)
Frame = -3 / -2
Query: 752 ETEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDEL 573
ETEKLHA+V RYK PDEHPFF + LPEP LPP+QYP+VLH A+SININK++W MYF L
Sbjct: 709 ETEKLHAKVDRYKSPDEHPFFPQCLPEPILPPIQYPQVLHRCAESININKKVWNMYFKHL 530
Query: 572 LPRLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQ 393
LPRLVK G DGN GS+ALCDT CLQ LS+RIH KFVA+AKF+E+P AY AI QDR Q
Sbjct: 529 LPRLVKPGDDGNCGSAALCDTMCLQILSKRIHLRKFVADAKFRENPAAYETAIKEQDRTQ 350
Query: 392 LMNLLTYETVERAIEHRVEAKAKIFGQEVNIGVEDNGSPPVYKIVPSLVAELYSYRIMPL 213
LM LLTYETVE ++ RVE KA+IFGQ++ I + + P YKI PSLVA+LY RIMPL
Sbjct: 349 LMQLLTYETVEEVVKKRVEIKARIFGQDITINDPETEADPSYKIQPSLVAKLYGERIMPL 170
Query: 212 TKEVQIAY 189
TKEVQI Y
Sbjct: 169 TKEVQIEY 146
Score = 213 bits (460), Expect = 5e-054
Identities = 114/194 (58%), Positives = 129/194 (66%)
Frame = +1 / +3
Query: 172 SSLLSKYAI*TSLVSGMIL*LYSSATKLGTILYTGGLPLSSTPMFTSCPKILALASTLCS 351
SSLLSKY+I TS V GMIL S ATKLG IL G +S + + S PKILAL STL
Sbjct: 129 SSLLSKYSIWTSFVRGMILSP*SFATKLGCIL*EGSASVSGSLIVMS*PKILALISTLFL 308
Query: 352 IARSTVSYVRRFMS*SRSWAIMAGV*ASGDS*NLASATNFP*WILLESACKQVVSQRALD 531
STVSYVR +S RS +++A *A+G S NLASATN IL ES CK +VSQRA +
Sbjct: 309 TTSSTVSYVRSCISCVRSCSLIAVS*AAGFSRNLASATNLRK*ILFESICKHIVSQRAAE 488
Query: 532 PALPSLPSFTNLGRSSSKYIFQISLLILIESAMGCKTLGYCIGGNRGSGRSLEKKGCSSG 711
P LPS P T+LGR KYIF LL+ I+SA CKT GY IGG GSG+ KKGCSSG
Sbjct: 489 PQLPSSPGLTSLGRRCLKYIFHTFLLMFIDSAQRCKTCGY*IGGRIGSGKHCGKKGCSSG 668
Query: 712 PLYLPTCAWSFSVS 753
LYL T A SFSVS
Sbjct: 669 LLYLSTFA*SFSVS 710
Score = 111 bits (237), Expect = 3e-023
Identities = 63/194 (32%), Positives = 101/194 (52%)
Frame = +3 / +2
Query: 171 IQPPKQIRDLNLFG*RHDSVAVQLGDQARNDLVHRWAAVVLHTDVHLLPEDLGFGLHPVF 350
IQ KQ+ +L+ HD +++ + AR V R + + ++L ++ GF L+ +
Sbjct: 128 IQSSKQVLNLDFLCEGHDPFSIEFCN*ARLYFVGRISFSFWVVNRYVLTKNSGFDLNSLL 307
Query: 351 DSTLHRFICEKVHELITVLGYYGWRVSFRGLLKLGLCHKLPIVDPSGECLQAGCVXXXXX 530
D +RF+ K+H+L VL + + R KLG+ +K V+ + LQ CV
Sbjct: 308 DYFFNRFVR*KLHQLCPVLFFDSCFIGSRIFTKLGVSNKFTQVNSL*KYLQTHCVTESS* 487
Query: 531 XXXXXXXFFHQSWKKFIKIHFPNLFVDIDRISNGMQNPWVLHRWQPGLRQILGKERVLIW 710
+ QS +K +IH P+L VD+ R MQN WVL+R + RQ L ++ +LI
Sbjct: 488 TTITVIPWLDQSGEKVFEIHIPHLLVDVYRFGATMQNLWVLNRRKDRFRQALWEKGMLIR 667
Query: 711 ALVSPNLCMELFSF 752
LV +LC++LFSF
Sbjct: 668 TLVPVHLCVKLFSF 709
>gb|AY089156.1| Arabidopsis thaliana clone 39613 mRNA, complete sequence
Length = 1274
Score = 272 bits (589), Expect(2) = 5e-075
Identities = 108/154 (70%), Positives = 129/154 (83%)
Frame = -3 / +3
Query: 749 TEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDELL 570
TEKLHA+VGR+K PDEHPFF DLPEP LPP+QYP+VLH ADSININK+IW MYF +L+
Sbjct: 489 TEKLHAKVGRFKSPDEHPFFPDDLPEPMLPPLQYPKVLHFAADSININKKIWNMYFRDLV 668
Query: 569 PRLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQL 390
PRLVK+G DGN GS+A+CD CLQ LS+RIHYGKFVAEAKFQ SPEAY AI AQD+D L
Sbjct: 669 PRLVKKGDDGNYGSTAVCDAICLQCLSKRIHYGKFVAEAKFQASPEAYESAIKAQDKDAL 848
Query: 389 MNLLTYETVERAIEHRVEAKAKIFGQEVNIGVED 288
M++LT+ TVE AI+ RVE K + +GQEV +G+E+
Sbjct: 849 MDMLTFPTVEDAIKKRVEMKTRTYGQEVKVGMEE 950
Score = 182 bits (391), Expect(2) = 1e-048
Identities = 91/154 (59%), Positives = 103/154 (66%)
Frame = +1 / -2
Query: 289 SSTPMFTSCPKILALASTLCSIARSTVSYVRRFMS*SRSWAIMAGV*ASGDS*NLASATN 468
SS P FTSCP + STL IA STV V +S S S A+MA ASG++*NLASATN
Sbjct: 949 SSIPTFTSCPYVRVFISTLFFIASSTVGNVSISISASLSCALMADSYASGEA*NLASATN 770
Query: 469 FP*WILLESACKQVVSQRALDPALPSLPSFTNLGRSSSKYIFQISLLILIESAMGCKTLG 648
P*WIL E +Q+ SQ A++P LPS P FT+LG S KY+F I L + IESA C T G
Sbjct: 769 LP*WILFERH*RQIASQTAVEP*LPSSPFFTSLGTRSLKYMFHIFLFMFIESAAKCNTFG 590
Query: 649 YCIGGNRGSGRSLEKKGCSSGPLYLPTCAWSFSV 750
Y GGN GSGRS KKGCSSG L LPT A SFSV
Sbjct: 589 Y*RGGNIGSGRSSGKKGCSSGLLNLPTLA*SFSV 488
Score = 104 bits (222), Expect(2) = 2e-024
Identities = 54/154 (35%), Positives = 78/154 (50%)
Frame = +3 / -1
Query: 288 VLHTDVHLLPEDLGFGLHPVFDSTLHRFICEKVHELITVLGYYGWRVSFRGLLKLGLCHK 467
+LH + H LP GF L+ + H C+ +H+ I +L + G V F LK C+K
Sbjct: 950 LLHPNFHFLPVCSGFHLNSLLYRIFHSRECQHIHQCILILCFDGGLVCFG*GLKFSFCNK 771
Query: 468 LPIVDPSGECLQAGCVXXXXXXXXXXXXFFHQSWKKFIKIHFPNLFVDIDRISNGMQNPW 647
++D E L+A V F H+SW K ++H P L V + RIS+ MQ+ W
Sbjct: 770 FTVMDSL*ETLKADSVTDSC*AVVTIIAFLHKSWNKVSEVHVPYLLVYVYRISSKMQHLW 591
Query: 648 VLHRWQPGLRQILGKERVLIWALVSPNLCMELFS 749
VL R Q L I+ +ER+ I L NL ++L S
Sbjct: 590 VLKRRQHRLW*IIREERMFIRTLKPTNLSVKLLS 489
Score = 34.1 bits (68), Expect(2) = 1e-048
Identities = 17/25 (68%), Positives = 18/25 (72%)
Frame = +1 / -3
Query: 169 QSSLLSKYAI*TSLVSGMIL*LYSS 243
QSSLLSKY+ *TS V GMI Y S
Sbjct: 1089 QSSLLSKYST*TSFVKGMIQSPYKS 1015
Score = 31.3 bits (62), Expect(2) = 5e-075
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = -3 / +2
Query: 251 LVAELYSYRIMPLTKEVQIAY 189
L +LY IMPLTKEVQ+ Y
Sbjct: 1007 LSCDLYGDWIMPLTKEVQVEY 1069
Score = 29.9 bits (59), Expect(2) = 2e-024
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +3 / -2
Query: 168 SIQPPKQIRDLNLFG*RHDSVAV 236
S+Q +Q+ LNLF *RHD +++
Sbjct: 1090 SVQSSEQVLHLNLFC*RHDPISI 1022
>emb|AX464574.1| Sequence 2 from Patent WO0202798
Length = 1207
Score = 273 bits (591), Expect(2) = 4e-074
Identities = 108/154 (70%), Positives = 130/154 (84%)
Frame = -3 / +1
Query: 749 TEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDELL 570
TEKLHA+VGR+K PDEHPFF DLPEP LPP+QYP+VLH ADSININK+IW MYF +L+
Sbjct: 415 TEKLHAKVGRFKSPDEHPFFPDDLPEPMLPPLQYPKVLHFAADSININKKIWNMYFRDLV 594
Query: 569 PRLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQL 390
PRLVK+G DGN GS+A+CD CLQ LS+RIHYGKFVAEAKFQ SPEAY AI AQD+D+L
Sbjct: 595 PRLVKKGDDGNYGSTAVCDAICLQCLSKRIHYGKFVAEAKFQASPEAYESAIKAQDKDRL 774
Query: 389 MNLLTYETVERAIEHRVEAKAKIFGQEVNIGVED 288
M++LT+ TVE AI+ RVE K + +GQEV +G+E+
Sbjct: 775 MDMLTFPTVEDAIKKRVEMKTRTYGQEVKVGMEE 876
Score = 182 bits (391), Expect(2) = 4e-052
Identities = 91/154 (59%), Positives = 103/154 (66%)
Frame = +1 / -3
Query: 289 SSTPMFTSCPKILALASTLCSIARSTVSYVRRFMS*SRSWAIMAGV*ASGDS*NLASATN 468
SS P FTSCP + STL IA STV V +S S S A+MA ASG++*NLASATN
Sbjct: 875 SSIPTFTSCPYVRVFISTLFFIASSTVGNVSISISRSLSCALMADSYASGEA*NLASATN 696
Query: 469 FP*WILLESACKQVVSQRALDPALPSLPSFTNLGRSSSKYIFQISLLILIESAMGCKTLG 648
P*WIL E +Q+ SQ A++P LPS P FT+LG S KY+F I L + IESA C T G
Sbjct: 695 LP*WILFERH*RQIASQTAVEP*LPSSPFFTSLGTRSLKYMFHIFLFMFIESAAKCNTFG 516
Query: 649 YCIGGNRGSGRSLEKKGCSSGPLYLPTCAWSFSV 750
Y GGN GSGRS KKGCSSG L LPT A SFSV
Sbjct: 515 Y*RGGNIGSGRSSGKKGCSSGLLNLPTLA*SFSV 414
Score = 104 bits (221), Expect(2) = 5e-025
Identities = 54/154 (35%), Positives = 78/154 (50%)
Frame = +3 / -2
Query: 288 VLHTDVHLLPEDLGFGLHPVFDSTLHRFICEKVHELITVLGYYGWRVSFRGLLKLGLCHK 467
+LH + H LP GF L+ + H C+ +H+ I +L + G V F LK C+K
Sbjct: 876 LLHPNFHFLPVCSGFHLNSLLYRIFHSRECQHIHQSILILCFDGGLVCFG*GLKFSFCNK 697
Query: 468 LPIVDPSGECLQAGCVXXXXXXXXXXXXFFHQSWKKFIKIHFPNLFVDIDRISNGMQNPW 647
++D E L+A V F H+SW K ++H P L V + RIS+ MQ+ W
Sbjct: 696 FTVMDSL*ETLKADSVTDSC*AVVTIIAFLHKSWNKVSEVHVPYLLVYVYRISSKMQHLW 517
Query: 648 VLHRWQPGLRQILGKERVLIWALVSPNLCMELFS 749
VL R Q L I+ +ER+ I L NL ++L S
Sbjct: 516 VLKRRQHRLW*IIREERMFIRTLKPTNLSVKLLS 415
Score = 45.5 bits (93), Expect(2) = 4e-052
Identities = 23/35 (65%), Positives = 25/35 (71%)
Frame = +1 / -3
Query: 169 QSSLLSKYAI*TSLVSGMIL*LYSSATKLGTILYT 273
QSSLLSKY+ *TS V GMI Y S TK+G IL T
Sbjct: 1016 QSSLLSKYST*TSFVKGMIQSPYKSPTKIGLIL*T 912
Score = 32.7 bits (65), Expect(2) = 5e-025
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +3 / -2
Query: 168 SIQPPKQIRDLNLFG*RHDSVAVQLGDQARNDLVH 272
S+Q +Q+ LNLF *RHD +++ + + R D V+
Sbjct: 1017 SVQSSEQVLHLNLFC*RHDPISI*VTN*DRTDFVN 913
Score = 27.6 bits (54), Expect(2) = 4e-074
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = -2 / +3
Query: 270 VQDRSELGRRAVQLQNHAANQRGSNRVFA*EAGL 169
+Q++S+L + +HA N+RGS+ V A + GL
Sbjct: 915 LQNQSDLSW*LIWRLDHAFNKRGSSGVLAQKTGL 1016
>emb|AX464580.1| Sequence 8 from Patent WO0202798
Length = 1207
Score = 273 bits (591), Expect(2) = 4e-074
Identities = 108/154 (70%), Positives = 130/154 (84%)
Frame = -3 / -1
Query: 749 TEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDELL 570
TEKLHA+VGR+K PDEHPFF DLPEP LPP+QYP+VLH ADSININK+IW MYF +L+
Sbjct: 793 TEKLHAKVGRFKSPDEHPFFPDDLPEPMLPPLQYPKVLHFAADSININKKIWNMYFRDLV 614
Query: 569 PRLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQL 390
PRLVK+G DGN GS+A+CD CLQ LS+RIHYGKFVAEAKFQ SPEAY AI AQD+D+L
Sbjct: 613 PRLVKKGDDGNYGSTAVCDAICLQCLSKRIHYGKFVAEAKFQASPEAYESAIKAQDKDRL 434
Query: 389 MNLLTYETVERAIEHRVEAKAKIFGQEVNIGVED 288
M++LT+ TVE AI+ RVE K + +GQEV +G+E+
Sbjct: 433 MDMLTFPTVEDAIKKRVEMKTRTYGQEVKVGMEE 332
Score = 182 bits (391), Expect(2) = 4e-052
Identities = 91/154 (59%), Positives = 103/154 (66%)
Frame = +1 / +3
Query: 289 SSTPMFTSCPKILALASTLCSIARSTVSYVRRFMS*SRSWAIMAGV*ASGDS*NLASATN 468
SS P FTSCP + STL IA STV V +S S S A+MA ASG++*NLASATN
Sbjct: 333 SSIPTFTSCPYVRVFISTLFFIASSTVGNVSISISRSLSCALMADSYASGEA*NLASATN 512
Query: 469 FP*WILLESACKQVVSQRALDPALPSLPSFTNLGRSSSKYIFQISLLILIESAMGCKTLG 648
P*WIL E +Q+ SQ A++P LPS P FT+LG S KY+F I L + IESA C T G
Sbjct: 513 LP*WILFERH*RQIASQTAVEP*LPSSPFFTSLGTRSLKYMFHIFLFMFIESAAKCNTFG 692
Query: 649 YCIGGNRGSGRSLEKKGCSSGPLYLPTCAWSFSV 750
Y GGN GSGRS KKGCSSG L LPT A SFSV
Sbjct: 693 Y*RGGNIGSGRSSGKKGCSSGLLNLPTLA*SFSV 794
Score = 104 bits (221), Expect(2) = 5e-025
Identities = 54/154 (35%), Positives = 78/154 (50%)
Frame = +3 / +2
Query: 288 VLHTDVHLLPEDLGFGLHPVFDSTLHRFICEKVHELITVLGYYGWRVSFRGLLKLGLCHK 467
+LH + H LP GF L+ + H C+ +H+ I +L + G V F LK C+K
Sbjct: 332 LLHPNFHFLPVCSGFHLNSLLYRIFHSRECQHIHQSILILCFDGGLVCFG*GLKFSFCNK 511
Query: 468 LPIVDPSGECLQAGCVXXXXXXXXXXXXFFHQSWKKFIKIHFPNLFVDIDRISNGMQNPW 647
++D E L+A V F H+SW K ++H P L V + RIS+ MQ+ W
Sbjct: 512 FTVMDSL*ETLKADSVTDSC*AVVTIIAFLHKSWNKVSEVHVPYLLVYVYRISSKMQHLW 691
Query: 648 VLHRWQPGLRQILGKERVLIWALVSPNLCMELFS 749
VL R Q L I+ +ER+ I L NL ++L S
Sbjct: 692 VLKRRQHRLW*IIREERMFIRTLKPTNLSVKLLS 793
Score = 45.5 bits (93), Expect(2) = 4e-052
Identities = 23/35 (65%), Positives = 25/35 (71%)
Frame = +1 / +3
Query: 169 QSSLLSKYAI*TSLVSGMIL*LYSSATKLGTILYT 273
QSSLLSKY+ *TS V GMI Y S TK+G IL T
Sbjct: 192 QSSLLSKYST*TSFVKGMIQSPYKSPTKIGLIL*T 296
Score = 32.7 bits (65), Expect(2) = 5e-025
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +3 / +2
Query: 168 SIQPPKQIRDLNLFG*RHDSVAVQLGDQARNDLVH 272
S+Q +Q+ LNLF *RHD +++ + + R D V+
Sbjct: 191 SVQSSEQVLHLNLFC*RHDPISI*VTN*DRTDFVN 295
Score = 27.6 bits (54), Expect(2) = 4e-074
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = -2 / -3
Query: 270 VQDRSELGRRAVQLQNHAANQRGSNRVFA*EAGL 169
+Q++S+L + +HA N+RGS+ V A + GL
Sbjct: 293 LQNQSDLSW*LIWRLDHAFNKRGSSGVLAQKTGL 192
>emb|Z26519.1|ATCHMUT A.thaliana mRNA for chorismate mutase
Length = 1207
Score = 273 bits (591), Expect(2) = 4e-074
Identities = 108/154 (70%), Positives = 130/154 (84%)
Frame = -3 / +1
Query: 749 TEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDELL 570
TEKLHA+VGR+K PDEHPFF DLPEP LPP+QYP+VLH ADSININK+IW MYF +L+
Sbjct: 415 TEKLHAKVGRFKSPDEHPFFPDDLPEPMLPPLQYPKVLHFAADSININKKIWNMYFRDLV 594
Query: 569 PRLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQL 390
PRLVK+G DGN GS+A+CD CLQ LS+RIHYGKFVAEAKFQ SPEAY AI AQD+D+L
Sbjct: 595 PRLVKKGDDGNYGSTAVCDAICLQCLSKRIHYGKFVAEAKFQASPEAYESAIKAQDKDRL 774
Query: 389 MNLLTYETVERAIEHRVEAKAKIFGQEVNIGVED 288
M++LT+ TVE AI+ RVE K + +GQEV +G+E+
Sbjct: 775 MDMLTFPTVEDAIKKRVEMKTRTYGQEVKVGMEE 876
Score = 182 bits (391), Expect(2) = 4e-052
Identities = 91/154 (59%), Positives = 103/154 (66%)
Frame = +1 / -3
Query: 289 SSTPMFTSCPKILALASTLCSIARSTVSYVRRFMS*SRSWAIMAGV*ASGDS*NLASATN 468
SS P FTSCP + STL IA STV V +S S S A+MA ASG++*NLASATN
Sbjct: 875 SSIPTFTSCPYVRVFISTLFFIASSTVGNVSISISRSLSCALMADSYASGEA*NLASATN 696
Query: 469 FP*WILLESACKQVVSQRALDPALPSLPSFTNLGRSSSKYIFQISLLILIESAMGCKTLG 648
P*WIL E +Q+ SQ A++P LPS P FT+LG S KY+F I L + IESA C T G
Sbjct: 695 LP*WILFERH*RQIASQTAVEP*LPSSPFFTSLGTRSLKYMFHIFLFMFIESAAKCNTFG 516
Query: 649 YCIGGNRGSGRSLEKKGCSSGPLYLPTCAWSFSV 750
Y GGN GSGRS KKGCSSG L LPT A SFSV
Sbjct: 515 Y*RGGNIGSGRSSGKKGCSSGLLNLPTLA*SFSV 414
Score = 104 bits (221), Expect(2) = 5e-025
Identities = 54/154 (35%), Positives = 78/154 (50%)
Frame = +3 / -2
Query: 288 VLHTDVHLLPEDLGFGLHPVFDSTLHRFICEKVHELITVLGYYGWRVSFRGLLKLGLCHK 467
+LH + H LP GF L+ + H C+ +H+ I +L + G V F LK C+K
Sbjct: 876 LLHPNFHFLPVCSGFHLNSLLYRIFHSRECQHIHQSILILCFDGGLVCFG*GLKFSFCNK 697
Query: 468 LPIVDPSGECLQAGCVXXXXXXXXXXXXFFHQSWKKFIKIHFPNLFVDIDRISNGMQNPW 647
++D E L+A V F H+SW K ++H P L V + RIS+ MQ+ W
Sbjct: 696 FTVMDSL*ETLKADSVTDSC*AVVTIIAFLHKSWNKVSEVHVPYLLVYVYRISSKMQHLW 517
Query: 648 VLHRWQPGLRQILGKERVLIWALVSPNLCMELFS 749
VL R Q L I+ +ER+ I L NL ++L S
Sbjct: 516 VLKRRQHRLW*IIREERMFIRTLKPTNLSVKLLS 415
Score = 45.5 bits (93), Expect(2) = 4e-052
Identities = 23/35 (65%), Positives = 25/35 (71%)
Frame = +1 / -3
Query: 169 QSSLLSKYAI*TSLVSGMIL*LYSSATKLGTILYT 273
QSSLLSKY+ *TS V GMI Y S TK+G IL T
Sbjct: 1016 QSSLLSKYST*TSFVKGMIQSPYKSPTKIGLIL*T 912
Score = 32.7 bits (65), Expect(2) = 5e-025
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +3 / -2
Query: 168 SIQPPKQIRDLNLFG*RHDSVAVQLGDQARNDLVH 272
S+Q +Q+ LNLF *RHD +++ + + R D V+
Sbjct: 1017 SVQSSEQVLHLNLFC*RHDPISI*VTN*DRTDFVN 913
Score = 27.6 bits (54), Expect(2) = 4e-074
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = -2 / +3
Query: 270 VQDRSELGRRAVQLQNHAANQRGSNRVFA*EAGL 169
+Q++S+L + +HA N+RGS+ V A + GL
Sbjct: 915 LQNQSDLSW*LIWRLDHAFNKRGSSGVLAQKTGL 1016
>ref|NM_113844.3| Arabidopsis thaliana CM1; chorismate mutase AT3G29200 (CM1) mRNA,
complete cds
Length = 1370
Score = 272 bits (589), Expect(2) = 7e-074
Identities = 108/154 (70%), Positives = 129/154 (83%)
Frame = -3 / +3
Query: 749 TEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDELL 570
TEKLHA+VGR+K PDEHPFF DLPEP LPP+QYP+VLH ADSININK+IW MYF +L+
Sbjct: 579 TEKLHAKVGRFKSPDEHPFFPDDLPEPMLPPLQYPKVLHFAADSININKKIWNMYFRDLV 758
Query: 569 PRLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQL 390
PRLVK+G DGN GS+A+CD CLQ LS+RIHYGKFVAEAKFQ SPEAY AI AQD+D L
Sbjct: 759 PRLVKKGDDGNYGSTAVCDAICLQCLSKRIHYGKFVAEAKFQASPEAYESAIKAQDKDAL 938
Query: 389 MNLLTYETVERAIEHRVEAKAKIFGQEVNIGVED 288
M++LT+ TVE AI+ RVE K + +GQEV +G+E+
Sbjct: 939 MDMLTFPTVEDAIKKRVEMKTRTYGQEVKVGMEE 1040
Score = 182 bits (391), Expect(2) = 4e-052
Identities = 91/154 (59%), Positives = 103/154 (66%)
Frame = +1 / -2
Query: 289 SSTPMFTSCPKILALASTLCSIARSTVSYVRRFMS*SRSWAIMAGV*ASGDS*NLASATN 468
SS P FTSCP + STL IA STV V +S S S A+MA ASG++*NLASATN
Sbjct: 1039 SSIPTFTSCPYVRVFISTLFFIASSTVGNVSISISASLSCALMADSYASGEA*NLASATN 860
Query: 469 FP*WILLESACKQVVSQRALDPALPSLPSFTNLGRSSSKYIFQISLLILIESAMGCKTLG 648
P*WIL E +Q+ SQ A++P LPS P FT+LG S KY+F I L + IESA C T G
Sbjct: 859 LP*WILFERH*RQIASQTAVEP*LPSSPFFTSLGTRSLKYMFHIFLFMFIESAAKCNTFG 680
Query: 649 YCIGGNRGSGRSLEKKGCSSGPLYLPTCAWSFSV 750
Y GGN GSGRS KKGCSSG L LPT A SFSV
Sbjct: 679 Y*RGGNIGSGRSSGKKGCSSGLLNLPTLA*SFSV 578
Score = 104 bits (222), Expect(2) = 3e-025
Identities = 54/154 (35%), Positives = 78/154 (50%)
Frame = +3 / -1
Query: 288 VLHTDVHLLPEDLGFGLHPVFDSTLHRFICEKVHELITVLGYYGWRVSFRGLLKLGLCHK 467
+LH + H LP GF L+ + H C+ +H+ I +L + G V F LK C+K
Sbjct: 1040 LLHPNFHFLPVCSGFHLNSLLYRIFHSRECQHIHQCILILCFDGGLVCFG*GLKFSFCNK 861
Query: 468 LPIVDPSGECLQAGCVXXXXXXXXXXXXFFHQSWKKFIKIHFPNLFVDIDRISNGMQNPW 647
++D E L+A V F H+SW K ++H P L V + RIS+ MQ+ W
Sbjct: 860 FTVMDSL*ETLKADSVTDSC*AVVTIIAFLHKSWNKVSEVHVPYLLVYVYRISSKMQHLW 681
Query: 648 VLHRWQPGLRQILGKERVLIWALVSPNLCMELFS 749
VL R Q L I+ +ER+ I L NL ++L S
Sbjct: 680 VLKRRQHRLW*IIREERMFIRTLKPTNLSVKLLS 579
Score = 45.5 bits (93), Expect(2) = 4e-052
Identities = 23/35 (65%), Positives = 25/35 (71%)
Frame = +1 / -2
Query: 169 QSSLLSKYAI*TSLVSGMIL*LYSSATKLGTILYT 273
QSSLLSKY+ *TS V GMI Y S TK+G IL T
Sbjct: 1180 QSSLLSKYST*TSFVKGMIQSPYKSPTKIGLIL*T 1076
Score = 32.7 bits (65), Expect(2) = 3e-025
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +3 / -1
Query: 168 SIQPPKQIRDLNLFG*RHDSVAVQLGDQARNDLVH 272
S+Q +Q+ LNLF *RHD +++ + + R D V+
Sbjct: 1181 SVQSSEQVLHLNLFC*RHDPISI*VTN*DRTDFVN 1077
Score = 27.6 bits (54), Expect(2) = 7e-074
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = -2 / +2
Query: 270 VQDRSELGRRAVQLQNHAANQRGSNRVFA*EAGL 169
+Q++S+L + +HA N+RGS+ V A + GL
Sbjct: 1079 LQNQSDLSW*LIWRLDHAFNKRGSSGVLAQKTGL 1180
>emb|AX506042.1| Sequence 737 from Patent WO0216655
Length = 1005
Score = 272 bits (589), Expect(2) = 7e-074
Identities = 108/154 (70%), Positives = 129/154 (83%)
Frame = -3 / +1
Query: 749 TEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDELL 570
TEKLHA+VGR+K PDEHPFF DLPEP LPP+QYP+VLH ADSININK+IW MYF +L+
Sbjct: 403 TEKLHAKVGRFKSPDEHPFFPDDLPEPMLPPLQYPKVLHFAADSININKKIWNMYFRDLV 582
Query: 569 PRLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQL 390
PRLVK+G DGN GS+A+CD CLQ LS+RIHYGKFVAEAKFQ SPEAY AI AQD+D L
Sbjct: 583 PRLVKKGDDGNYGSTAVCDAICLQCLSKRIHYGKFVAEAKFQASPEAYESAIKAQDKDAL 762
Query: 389 MNLLTYETVERAIEHRVEAKAKIFGQEVNIGVED 288
M++LT+ TVE AI+ RVE K + +GQEV +G+E+
Sbjct: 763 MDMLTFPTVEDAIKKRVEMKTRTYGQEVKVGMEE 864
Score = 182 bits (391), Expect(2) = 4e-052
Identities = 91/154 (59%), Positives = 103/154 (66%)
Frame = +1 / -2
Query: 289 SSTPMFTSCPKILALASTLCSIARSTVSYVRRFMS*SRSWAIMAGV*ASGDS*NLASATN 468
SS P FTSCP + STL IA STV V +S S S A+MA ASG++*NLASATN
Sbjct: 863 SSIPTFTSCPYVRVFISTLFFIASSTVGNVSISISASLSCALMADSYASGEA*NLASATN 684
Query: 469 FP*WILLESACKQVVSQRALDPALPSLPSFTNLGRSSSKYIFQISLLILIESAMGCKTLG 648
P*WIL E +Q+ SQ A++P LPS P FT+LG S KY+F I L + IESA C T G
Sbjct: 683 LP*WILFERH*RQIASQTAVEP*LPSSPFFTSLGTRSLKYMFHIFLFMFIESAAKCNTFG 504
Query: 649 YCIGGNRGSGRSLEKKGCSSGPLYLPTCAWSFSV 750
Y GGN GSGRS KKGCSSG L LPT A SFSV
Sbjct: 503 Y*RGGNIGSGRSSGKKGCSSGLLNLPTLA*SFSV 402
Score = 104 bits (222), Expect(2) = 3e-025
Identities = 54/154 (35%), Positives = 78/154 (50%)
Frame = +3 / -1
Query: 288 VLHTDVHLLPEDLGFGLHPVFDSTLHRFICEKVHELITVLGYYGWRVSFRGLLKLGLCHK 467
+LH + H LP GF L+ + H C+ +H+ I +L + G V F LK C+K
Sbjct: 864 LLHPNFHFLPVCSGFHLNSLLYRIFHSRECQHIHQCILILCFDGGLVCFG*GLKFSFCNK 685
Query: 468 LPIVDPSGECLQAGCVXXXXXXXXXXXXFFHQSWKKFIKIHFPNLFVDIDRISNGMQNPW 647
++D E L+A V F H+SW K ++H P L V + RIS+ MQ+ W
Sbjct: 684 FTVMDSL*ETLKADSVTDSC*AVVTIIAFLHKSWNKVSEVHVPYLLVYVYRISSKMQHLW 505
Query: 648 VLHRWQPGLRQILGKERVLIWALVSPNLCMELFS 749
VL R Q L I+ +ER+ I L NL ++L S
Sbjct: 504 VLKRRQHRLW*IIREERMFIRTLKPTNLSVKLLS 403
Score = 45.5 bits (93), Expect(2) = 4e-052
Identities = 23/35 (65%), Positives = 25/35 (71%)
Frame = +1 / -2
Query: 169 QSSLLSKYAI*TSLVSGMIL*LYSSATKLGTILYT 273
QSSLLSKY+ *TS V GMI Y S TK+G IL T
Sbjct: 1004 QSSLLSKYST*TSFVKGMIQSPYKSPTKIGLIL*T 900
Score = 32.7 bits (65), Expect(2) = 3e-025
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +3 / -1
Query: 168 SIQPPKQIRDLNLFG*RHDSVAVQLGDQARNDLVH 272
S+Q +Q+ LNLF *RHD +++ + + R D V+
Sbjct: 1005 SVQSSEQVLHLNLFC*RHDPISI*VTN*DRTDFVN 901
Score = 27.6 bits (54), Expect(2) = 7e-074
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = -2 / +3
Query: 270 VQDRSELGRRAVQLQNHAANQRGSNRVFA*EAGL 169
+Q++S+L + +HA N+RGS+ V A + GL
Sbjct: 903 LQNQSDLSW*LIWRLDHAFNKRGSSGVLAQKTGL 1004
>emb|BX822129.1|CNS0A727 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB15ZB12 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1329
Score = 271 bits (586), Expect(2) = 2e-073
Identities = 107/154 (69%), Positives = 129/154 (83%)
Frame = -3 / +3
Query: 749 TEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDELL 570
TEKLHA+VGR+K PDEHPFF DLPEP LPP+QYP+VLH ADSININK+IW MYF +L+
Sbjct: 579 TEKLHAKVGRFKSPDEHPFFPDDLPEPMLPPLQYPKVLHFAADSININKKIWNMYFRDLV 758
Query: 569 PRLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQL 390
PRLVK+G DGN GS+A+CD CL+ LS+RIHYGKFVAEAKFQ SPEAY AI AQD+D L
Sbjct: 759 PRLVKKGDDGNYGSTAVCDAICLECLSKRIHYGKFVAEAKFQASPEAYESAIKAQDKDAL 938
Query: 389 MNLLTYETVERAIEHRVEAKAKIFGQEVNIGVED 288
M++LT+ TVE AI+ RVE K + +GQEV +G+E+
Sbjct: 939 MDMLTFPTVEDAIKKRVEMKTRTYGQEVKVGMEE 1040
Score = 181 bits (389), Expect(2) = 8e-052
Identities = 90/154 (58%), Positives = 102/154 (66%)
Frame = +1 / -3
Query: 289 SSTPMFTSCPKILALASTLCSIARSTVSYVRRFMS*SRSWAIMAGV*ASGDS*NLASATN 468
SS P FTSCP + STL IA STV V +S S S A+MA ASG++*NLASATN
Sbjct: 1039 SSIPTFTSCPYVRVFISTLFFIASSTVGNVSISISASLSCALMADSYASGEA*NLASATN 860
Query: 469 FP*WILLESACKQVVSQRALDPALPSLPSFTNLGRSSSKYIFQISLLILIESAMGCKTLG 648
P*WIL E +Q+ S A++P LPS P FT+LG S KY+F I L + IESA C T G
Sbjct: 859 LP*WILFERHSRQIASHTAVEP*LPSSPFFTSLGTRSLKYMFHIFLFMFIESAAKCNTFG 680
Query: 649 YCIGGNRGSGRSLEKKGCSSGPLYLPTCAWSFSV 750
Y GGN GSGRS KKGCSSG L LPT A SFSV
Sbjct: 679 Y*RGGNIGSGRSSGKKGCSSGLLNLPTLA*SFSV 578
Score = 104 bits (222), Expect(2) = 3e-025
Identities = 54/154 (35%), Positives = 78/154 (50%)
Frame = +3 / -2
Query: 288 VLHTDVHLLPEDLGFGLHPVFDSTLHRFICEKVHELITVLGYYGWRVSFRGLLKLGLCHK 467
+LH + H LP GF L+ + H C+ +H+ I +L + G V F LK C+K
Sbjct: 1040 LLHPNFHFLPVCSGFHLNSLLYRIFHSRECQHIHQCILILCFDGGLVCFG*GLKFSFCNK 861
Query: 468 LPIVDPSGECLQAGCVXXXXXXXXXXXXFFHQSWKKFIKIHFPNLFVDIDRISNGMQNPW 647
++D E L+A V F H+SW K ++H P L V + RIS+ MQ+ W
Sbjct: 860 FTVMDSL*ETLKADSVTHSC*AVVTIIAFLHKSWNKVSEVHVPYLLVYVYRISSKMQHLW 681
Query: 648 VLHRWQPGLRQILGKERVLIWALVSPNLCMELFS 749
VL R Q L I+ +ER+ I L NL ++L S
Sbjct: 680 VLKRRQHRLW*IIREERMFIRTLKPTNLSVKLLS 579
Score = 45.5 bits (93), Expect(2) = 8e-052
Identities = 23/35 (65%), Positives = 25/35 (71%)
Frame = +1 / -3
Query: 169 QSSLLSKYAI*TSLVSGMIL*LYSSATKLGTILYT 273
QSSLLSKY+ *TS V GMI Y S TK+G IL T
Sbjct: 1180 QSSLLSKYST*TSFVKGMIQSPYKSPTKIGLIL*T 1076
Score = 32.7 bits (65), Expect(2) = 3e-025
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +3 / -2
Query: 168 SIQPPKQIRDLNLFG*RHDSVAVQLGDQARNDLVH 272
S+Q +Q+ LNLF *RHD +++ + + R D V+
Sbjct: 1181 SVQSSEQVLHLNLFC*RHDPISI*VTN*DRTDFVN 1077
Score = 27.6 bits (54), Expect(2) = 2e-073
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = -2 / +2
Query: 270 VQDRSELGRRAVQLQNHAANQRGSNRVFA*EAGL 169
+Q++S+L + +HA N+RGS+ V A + GL
Sbjct: 1079 LQNQSDLSW*LIWRLDHAFNKRGSSGVLAQKTGL 1180
>emb|BX824460.1|CNS0A6WL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH4ZG08 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1265
Score = 270 bits (583), Expect(2) = 4e-073
Identities = 107/154 (69%), Positives = 128/154 (83%)
Frame = -3 / +1
Query: 749 TEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDELL 570
TEKLHA+VGR+K PDEHPFF DLPEP LPP+QYP+VLH ADSININK+IW MYF +L+
Sbjct: 472 TEKLHAKVGRFKSPDEHPFFPDDLPEPMLPPLQYPKVLHFAADSININKKIWNMYFRDLV 651
Query: 569 PRLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQL 390
PRLVK+G DGN GS+A+CD CLQ LS+RIHYGKFVAEAKFQ SPEAY AI AQD+D L
Sbjct: 652 PRLVKKGDDGNYGSTAVCDAICLQCLSKRIHYGKFVAEAKFQASPEAYESAIKAQDKDAL 831
Query: 389 MNLLTYETVERAIEHRVEAKAKIFGQEVNIGVED 288
M++L + TVE AI+ RVE K + +GQEV +G+E+
Sbjct: 832 MDMLKFPTVEDAIKKRVEMKTRTYGQEVKVGMEE 933
Score = 177 bits (381), Expect(2) = 1e-050
Identities = 89/154 (57%), Positives = 101/154 (65%)
Frame = +1 / -1
Query: 289 SSTPMFTSCPKILALASTLCSIARSTVSYVRRFMS*SRSWAIMAGV*ASGDS*NLASATN 468
SS P FTSCP + STL IA STV +S S S A+MA ASG++*NLASATN
Sbjct: 932 SSIPTFTSCPYVRVFISTLFFIASSTVGNFSISISASLSCALMADSYASGEA*NLASATN 753
Query: 469 FP*WILLESACKQVVSQRALDPALPSLPSFTNLGRSSSKYIFQISLLILIESAMGCKTLG 648
P*WIL E +Q+ S A++P LPS P FT+LG S KY+F I L + IESA C T G
Sbjct: 752 LP*WILFERH*RQIASHTAVEP*LPSSPFFTSLGTRSLKYMFHIFLFMFIESAAKCNTFG 573
Query: 649 YCIGGNRGSGRSLEKKGCSSGPLYLPTCAWSFSV 750
Y GGN GSGRS KKGCSSG L LPT A SFSV
Sbjct: 572 Y*RGGNIGSGRSSGKKGCSSGLLNLPTLA*SFSV 471
Score = 99.6 bits (211), Expect(2) = 1e-023
Identities = 53/154 (34%), Positives = 77/154 (50%)
Frame = +3 / -3
Query: 288 VLHTDVHLLPEDLGFGLHPVFDSTLHRFICEKVHELITVLGYYGWRVSFRGLLKLGLCHK 467
+LH + H LP GF L+ + H + +H+ I +L + G V F LK C+K
Sbjct: 933 LLHPNFHFLPVCSGFHLNSLLYRIFHSREFQHIHQCILILCFDGGLVCFG*GLKFSFCNK 754
Query: 468 LPIVDPSGECLQAGCVXXXXXXXXXXXXFFHQSWKKFIKIHFPNLFVDIDRISNGMQNPW 647
++D E L+A V F H+SW K ++H P L V + RIS+ MQ+ W
Sbjct: 753 FTVMDSL*ETLKADSVTYSC*AVVTIIAFLHKSWNKVSEVHVPYLLVYVYRISSKMQHLW 574
Query: 648 VLHRWQPGLRQILGKERVLIWALVSPNLCMELFS 749
VL R Q L I+ +ER+ I L NL ++L S
Sbjct: 573 VLKRRQHRLW*IIREERMFIRTLKPTNLSVKLLS 472
Score = 45.5 bits (93), Expect(2) = 1e-050
Identities = 23/35 (65%), Positives = 25/35 (71%)
Frame = +1 / -1
Query: 169 QSSLLSKYAI*TSLVSGMIL*LYSSATKLGTILYT 273
QSSLLSKY+ *TS V GMI Y S TK+G IL T
Sbjct: 1073 QSSLLSKYST*TSFVKGMIQSPYKSPTKIGLIL*T 969
Score = 32.7 bits (65), Expect(2) = 1e-023
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +3 / -3
Query: 168 SIQPPKQIRDLNLFG*RHDSVAVQLGDQARNDLVH 272
S+Q +Q+ LNLF *RHD +++ + + R D V+
Sbjct: 1074 SVQSSEQVLHLNLFC*RHDPISI*VTN*DRTDFVN 970
Score = 27.6 bits (54), Expect(2) = 4e-073
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = -2 / +3
Query: 270 VQDRSELGRRAVQLQNHAANQRGSNRVFA*EAGL 169
+Q++S+L + +HA N+RGS+ V A + GL
Sbjct: 972 LQNQSDLSW*LIWRLDHAFNKRGSSGVLAQKTGL 1073
>gb|BX840398.1|BX840398 BX840398 Arabidopsis thaliana Hormone Treated Callus Col-0
Arabidopsis thaliana cDNA clone GSLTPGH61ZC01 5PRIM,
mRNA sequence
Length = 977
Score = 268 bits (580), Expect = 1e-070
Identities = 107/154 (69%), Positives = 128/154 (83%)
Frame = -3 / +1
Query: 749 TEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDELL 570
TEKLHA+VGR+K PDEHPFF DLPEP LPP+QYP+VLH ADSININK+IW MYF +L+
Sbjct: 472 TEKLHAKVGRFKSPDEHPFFPDDLPEPMLPPLQYPKVLHFAADSININKKIWNMYFRDLV 651
Query: 569 PRLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQL 390
PRLVK+G DGN GS+A+C CLQ LS+RIHYGKFVAEAKFQ SPEAY AI AQD+D L
Sbjct: 652 PRLVKKGDDGNYGSTAVCYAICLQCLSKRIHYGKFVAEAKFQASPEAYESAIKAQDKDAL 831
Query: 389 MNLLTYETVERAIEHRVEAKAKIFGQEVNIGVED 288
M++LT+ TVE AI+ RVE K + +GQEV +G+E+
Sbjct: 832 MDMLTFPTVEDAIKKRVEMKTRTYGQEVKVGMEE 933
Score = 177 bits (380), Expect = 5e-043
Identities = 90/157 (57%), Positives = 102/157 (64%)
Frame = +1 / -1
Query: 280 LPLSSTPMFTSCPKILALASTLCSIARSTVSYVRRFMS*SRSWAIMAGV*ASGDS*NLAS 459
L SS P TSCP + STL IA STV V +S S S A+MA ASG++*NLAS
Sbjct: 941 LSFSSIPTLTSCPYVRVFISTLFFIASSTVGNVSISISASLSCALMADSYASGEA*NLAS 762
Query: 460 ATNFP*WILLESACKQVVSQRALDPALPSLPSFTNLGRSSSKYIFQISLLILIESAMGCK 639
ATN P*WIL E +Q+ Q A++P LPS P FT+LG S KY+F I L + IESA C
Sbjct: 761 ATNLP*WILFERH*RQIA*QTAVEP*LPSSPFFTSLGTRSLKYMFHIFLFMFIESAAKCN 582
Query: 640 TLGYCIGGNRGSGRSLEKKGCSSGPLYLPTCAWSFSV 750
T GY GGN GSGRS KKGCSSG L LPT A SFSV
Sbjct: 581 TFGY*RGGNIGSGRSSGKKGCSSGLLNLPTLA*SFSV 471
>gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom arm complete sequence
Length = 14668883
Score = 109 bits (232), Expect(4) = 3e-068
Identities = 47/73 (64%), Positives = 55/73 (75%)
Frame = -3 / +3
Query: 407 QDRDQLMNLLTYETVERAIEHRVEAKAKIFGQEVNIGVEDNGSPPVYKIVPSLVAELYSY 228
QDR QLM LLTYETVE ++ RVE KA+IFGQ++ I + + P YKI PSLVA+LY
Sbjct: 10323516 QDRTQLMQLLTYETVEEVVKKRVEIKARIFGQDITINDPETEADPSYKIQPSLVAKLYGE 10323695
Query: 227 RIMPLTKEVQIAY 189
RIMPLTKEVQI Y
Sbjct: 10323696 RIMPLTKEVQIEY 10323734
Score = 94.1 bits (199), Expect(4) = 3e-068
Identities = 37/52 (71%), Positives = 42/52 (80%)
Frame = -3 / +1
Query: 644 RVLHPIADSININKEIWKMYFDELLPRLVKEGSDGNAGSSALCDTTCLQALS 489
+VLH A+SININK++W MYF LLPRLVK G DGN GS+ALCDT CLQA S
Sbjct: 10323106 QVLHRCAESININKKVWNMYFKHLLPRLVKPGDDGNCGSAALCDTMCLQARS 10323261
Score = 80.8 bits (170), Expect(4) = 1e-043
Identities = 46/79 (58%), Positives = 51/79 (64%)
Frame = +1 / -2
Query: 172 SSLLSKYAI*TSLVSGMIL*LYSSATKLGTILYTGGLPLSSTPMFTSCPKILALASTLCS 351
SSLLSKY+I TS V GMIL S ATKLG IL G +S + + S PKILAL STL
Sbjct: 10323751 SSLLSKYSIWTSFVRGMILSP*SFATKLGCIL*EGSASVSGSLIVMS*PKILALISTLFL 10323572
Query: 352 IARSTVSYVRRFMS*SRSW 408
STVSYVR +S RSW
Sbjct: 10323571 TTSSTVSYVRSCISCVRSW 10323515
Score = 69.8 bits (146), Expect(4) = 1e-043
Identities = 29/49 (59%), Positives = 34/49 (69%)
Frame = +1 / -1
Query: 496 ACKQVVSQRALDPALPSLPSFTNLGRSSSKYIFQISLLILIESAMGCKT 642
ACK +VSQRA +P LPS P T+LGR KYIF LL+ I+SA CKT
Sbjct: 10323254 ACKHIVSQRAAEPQLPSSPGLTSLGRRCLKYIFHTFLLMFIDSAQRCKT 10323108
Score = 60.2 bits (125), Expect(4) = 3e-068
Identities = 22/30 (73%), Positives = 25/30 (83%)
Frame = -3 / +2
Query: 728 VGRYKGPDEHPFFSKDLPEPRLPPMQYPRV 639
V RYK PDEHPFF + LPEP LPP+QYP+V
Sbjct: 10322921 VDRYKSPDEHPFFPQCLPEPILPPIQYPQV 10323010
Score = 55.1 bits (114), Expect(4) = 3e-068
Identities = 23/33 (69%), Positives = 27/33 (81%)
Frame = -3 / +1
Query: 503 LQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQ 405
LQ LS+RIH+GKFVAEAKF+E+P AY AI Q
Sbjct: 10323331 LQILSKRIHFGKFVAEAKFRENPAAYETAIKEQ 10323429
Score = 46.4 bits (95), Expect(4) = 1e-043
Identities = 20/30 (66%), Positives = 21/30 (70%)
Frame = +1 / -3
Query: 640 TLGYCIGGNRGSGRSLEKKGCSSGPLYLPT 729
T GY IGG GSG+ KKGCSSG LYL T
Sbjct: 10323009 TCGY*IGGRIGSGKHCGKKGCSSGLLYLST 10322920
Score = 37.7 bits (76), Expect(4) = 1e-043
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = +1 / -1
Query: 409 AIMAGV*ASGDS*NLASATNFP*WILLESACKQ 507
+++A *A+G S NLASATN P IL ES CK+
Sbjct: 10323425 SLIAVS*AAGFSRNLASATNLPK*ILFESICKE 10323327
>gb|AC073178.9|AC073178 Arabidopsis thaliana chromosome 1 BAC F10D13 genomic sequence, complete
sequence
Length = 107214
Score = 109 bits (232), Expect(4) = 3e-068
Identities = 47/73 (64%), Positives = 55/73 (75%)
Frame = -3 / +2
Query: 407 QDRDQLMNLLTYETVERAIEHRVEAKAKIFGQEVNIGVEDNGSPPVYKIVPSLVAELYSY 228
QDR QLM LLTYETVE ++ RVE KA+IFGQ++ I + + P YKI PSLVA+LY
Sbjct: 24641 QDRTQLMQLLTYETVEEVVKKRVEIKARIFGQDITINDPETEADPSYKIQPSLVAKLYGE 24820
Query: 227 RIMPLTKEVQIAY 189
RIMPLTKEVQI Y
Sbjct: 24821 RIMPLTKEVQIEY 24859
Score = 94.1 bits (199), Expect(4) = 3e-068
Identities = 37/52 (71%), Positives = 42/52 (80%)
Frame = -3 / +3
Query: 644 RVLHPIADSININKEIWKMYFDELLPRLVKEGSDGNAGSSALCDTTCLQALS 489
+VLH A+SININK++W MYF LLPRLVK G DGN GS+ALCDT CLQA S
Sbjct: 24231 QVLHRCAESININKKVWNMYFKHLLPRLVKPGDDGNCGSAALCDTMCLQARS 24386
Score = 80.8 bits (170), Expect(4) = 2e-043
Identities = 46/79 (58%), Positives = 51/79 (64%)
Frame = +1 / -1
Query: 172 SSLLSKYAI*TSLVSGMIL*LYSSATKLGTILYTGGLPLSSTPMFTSCPKILALASTLCS 351
SSLLSKY+I TS V GMIL S ATKLG IL G +S + + S PKILAL STL
Sbjct: 24876 SSLLSKYSIWTSFVRGMILSP*SFATKLGCIL*EGSASVSGSLIVMS*PKILALISTLFL 24697
Query: 352 IARSTVSYVRRFMS*SRSW 408
STVSYVR +S RSW
Sbjct: 24696 TTSSTVSYVRSCISCVRSW 24640
Score = 69.8 bits (146), Expect(4) = 2e-043
Identities = 29/49 (59%), Positives = 34/49 (69%)
Frame = +1 / -3
Query: 496 ACKQVVSQRALDPALPSLPSFTNLGRSSSKYIFQISLLILIESAMGCKT 642
ACK +VSQRA +P LPS P T+LGR KYIF LL+ I+SA CKT
Sbjct: 24379 ACKHIVSQRAAEPQLPSSPGLTSLGRRCLKYIFHTFLLMFIDSAQRCKT 24233
Score = 60.2 bits (125), Expect(4) = 3e-068
Identities = 22/30 (73%), Positives = 25/30 (83%)
Frame = -3 / +1
Query: 728 VGRYKGPDEHPFFSKDLPEPRLPPMQYPRV 639
V RYK PDEHPFF + LPEP LPP+QYP+V
Sbjct: 24046 VDRYKSPDEHPFFPQCLPEPILPPIQYPQV 24135
Score = 55.1 bits (114), Expect(4) = 3e-068
Identities = 23/33 (69%), Positives = 27/33 (81%)
Frame = -3 / +3
Query: 503 LQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQ 405
LQ LS+RIH+GKFVAEAKF+E+P AY AI Q
Sbjct: 24456 LQILSKRIHFGKFVAEAKFRENPAAYETAIKEQ 24554
Score = 46.4 bits (95), Expect(4) = 2e-043
Identities = 20/30 (66%), Positives = 21/30 (70%)
Frame = +1 / -2
Query: 640 TLGYCIGGNRGSGRSLEKKGCSSGPLYLPT 729
T GY IGG GSG+ KKGCSSG LYL T
Sbjct: 24134 TCGY*IGGRIGSGKHCGKKGCSSGLLYLST 24045
Score = 37.7 bits (76), Expect(4) = 2e-043
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = +1 / -3
Query: 409 AIMAGV*ASGDS*NLASATNFP*WILLESACKQ 507
+++A *A+G S NLASATN P IL ES CK+
Sbjct: 24550 SLIAVS*AAGFSRNLASATNLPK*ILFESICKE 24452
>gb|AC018364.5|AC018364 Arabidopsis thaliana chromosome 1 BAC F23O10 genomic sequence, complete
sequence
Length = 93802
Score = 109 bits (232), Expect(4) = 3e-068
Identities = 47/73 (64%), Positives = 55/73 (75%)
Frame = -3 / -2
Query: 407 QDRDQLMNLLTYETVERAIEHRVEAKAKIFGQEVNIGVEDNGSPPVYKIVPSLVAELYSY 228
QDR QLM LLTYETVE ++ RVE KA+IFGQ++ I + + P YKI PSLVA+LY
Sbjct: 15588 QDRTQLMQLLTYETVEEVVKKRVEIKARIFGQDITINDPETEADPSYKIQPSLVAKLYGE 15409
Query: 227 RIMPLTKEVQIAY 189
RIMPLTKEVQI Y
Sbjct: 15408 RIMPLTKEVQIEY 15370
Score = 94.1 bits (199), Expect(4) = 3e-068
Identities = 37/52 (71%), Positives = 42/52 (80%)
Frame = -3 / -3
Query: 644 RVLHPIADSININKEIWKMYFDELLPRLVKEGSDGNAGSSALCDTTCLQALS 489
+VLH A+SININK++W MYF LLPRLVK G DGN GS+ALCDT CLQA S
Sbjct: 15998 QVLHRCAESININKKVWNMYFKHLLPRLVKPGDDGNCGSAALCDTMCLQARS 15843
Score = 80.8 bits (170), Expect(4) = 2e-043
Identities = 46/79 (58%), Positives = 51/79 (64%)
Frame = +1 / +2
Query: 172 SSLLSKYAI*TSLVSGMIL*LYSSATKLGTILYTGGLPLSSTPMFTSCPKILALASTLCS 351
SSLLSKY+I TS V GMIL S ATKLG IL G +S + + S PKILAL STL
Sbjct: 15353 SSLLSKYSIWTSFVRGMILSP*SFATKLGCIL*EGSASVSGSLIVMS*PKILALISTLFL 15532
Query: 352 IARSTVSYVRRFMS*SRSW 408
STVSYVR +S RSW
Sbjct: 15533 TTSSTVSYVRSCISCVRSW 15589
Score = 69.8 bits (146), Expect(4) = 2e-043
Identities = 29/49 (59%), Positives = 34/49 (69%)
Frame = +1 / +1
Query: 496 ACKQVVSQRALDPALPSLPSFTNLGRSSSKYIFQISLLILIESAMGCKT 642
ACK +VSQRA +P LPS P T+LGR KYIF LL+ I+SA CKT
Sbjct: 15850 ACKHIVSQRAAEPQLPSSPGLTSLGRRCLKYIFHTFLLMFIDSAQRCKT 15996
Score = 60.2 bits (125), Expect(4) = 3e-068
Identities = 22/30 (73%), Positives = 25/30 (83%)
Frame = -3 / -1
Query: 728 VGRYKGPDEHPFFSKDLPEPRLPPMQYPRV 639
V RYK PDEHPFF + LPEP LPP+QYP+V
Sbjct: 16183 VDRYKSPDEHPFFPQCLPEPILPPIQYPQV 16094
Score = 55.1 bits (114), Expect(4) = 3e-068
Identities = 23/33 (69%), Positives = 27/33 (81%)
Frame = -3 / -3
Query: 503 LQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQ 405
LQ LS+RIH+GKFVAEAKF+E+P AY AI Q
Sbjct: 15773 LQILSKRIHFGKFVAEAKFRENPAAYETAIKEQ 15675
Score = 46.4 bits (95), Expect(4) = 2e-043
Identities = 20/30 (66%), Positives = 21/30 (70%)
Frame = +1 / +3
Query: 640 TLGYCIGGNRGSGRSLEKKGCSSGPLYLPT 729
T GY IGG GSG+ KKGCSSG LYL T
Sbjct: 16095 TCGY*IGGRIGSGKHCGKKGCSSGLLYLST 16184
Score = 37.7 bits (76), Expect(4) = 2e-043
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = +1 / +1
Query: 409 AIMAGV*ASGDS*NLASATNFP*WILLESACKQ 507
+++A *A+G S NLASATN P IL ES CK+
Sbjct: 15679 SLIAVS*AAGFSRNLASATNLPK*ILFESICKE 15777
>gb|BX839097.1|BX839097 BX839097 Arabidopsis thaliana Adult vegetative tissue Col-0
Arabidopsis thaliana cDNA clone GSLTLS95ZC11 5PRIM, mRNA
sequence
Length = 1025
Score = 251 bits (543), Expect = 2e-065
Identities = 103/151 (68%), Positives = 122/151 (80%)
Frame = -3 / +3
Query: 749 TEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDELL 570
TEKLHA+VGR+K PDEHPFF DLPEP LPP+QY +VLH ADSININK+IW MYF +L+
Sbjct: 528 TEKLHAKVGRFKSPDEHPFFPDDLPEPMLPPLQYRKVLHFAADSININKKIWNMYFRDLV 707
Query: 569 PRLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQL 390
PRLVK+G DGN GS+A+CD CLQ LS+RIHYGKFVAEAKFQ SPEAY AI AQD+D L
Sbjct: 708 PRLVKKGDDGNYGSTAVCDAICLQCLSKRIHYGKFVAEAKFQASPEAYESAIKAQDKDAL 887
Query: 389 MNLLTYETVERAIEHRVEAKAKIFGQEVNIG 297
M++LT+ TVE AI+ RVE K + G+ +G
Sbjct: 888 MDMLTFPTVEDAIKKRVEMKPENTGKM*ELG 980
Score = 160 bits (343), Expect(2) = 1e-038
Identities = 83/145 (57%), Positives = 94/145 (64%)
Frame = +1 / -2
Query: 316 PKILALASTLCSIARSTVSYVRRFMS*SRSWAIMAGV*ASGDS*NLASATNFP*WILLES 495
P STL IA STV V +S S S A+MA ASG++*NLASATN P*WIL E
Sbjct: 961 PVFSGFISTLFFIASSTVGNVSISISASLSCALMADSYASGEA*NLASATNLP*WILFER 782
Query: 496 ACKQVVSQRALDPALPSLPSFTNLGRSSSKYIFQISLLILIESAMGCKTLGYCIGGNRGS 675
+Q+ SQ A++P LPS P FT+LG S KY+F I L + IESA C T Y GGN GS
Sbjct: 781 H*RQIASQTAVEP*LPSSPFFTSLGTRSLKYMFHIFLFMFIESAAKCNTFRY*RGGNIGS 602
Query: 676 GRSLEKKGCSSGPLYLPTCAWSFSV 750
GRS KKGCSSG L LPT A SFSV
Sbjct: 601 GRSSGKKGCSSGLLNLPTLA*SFSV 527
Score = 22.1 bits (42), Expect(2) = 1e-038
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1 / -3
Query: 286 LSSTPMFTSCP 318
LSS P TSCP
Sbjct: 990 LSSIPTLTSCP 958
>gb|AY065238.1| Arabidopsis thaliana putative chorismate mutase CM2 (At5g10870)
mRNA, complete cds
Length = 1055
Score = 214 bits (462), Expect(2) = 1e-057
Identities = 88/149 (59%), Positives = 111/149 (74%)
Frame = -3 / +3
Query: 752 ETEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDEL 573
ETE + A+VGRY+ P+E+PFF +++P P +YP LHP A S+NINK+IW +YF EL
Sbjct: 309 ETEIIQAKVGRYEYPEENPFFLENIPHSVFPTHKYPSALHPKALSVNINKQIWDIYFKEL 488
Query: 572 LPRLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQ 393
LP VK G DGN S+A D CLQALSRRIHYGKFVAE KF+++P+ Y PAI AQDR+
Sbjct: 489 LPLFVKPGDDGNYPSTAASDLACLQALSRRIHYGKFVAEVKFRDAPQDYEPAIRAQDREA 668
Query: 392 LMNLLTYETVERAIEHRVEAKAKIFGQEV 306
LM LLT+E VE ++ RV+ KA+ FGQEV
Sbjct: 669 LMKLLTFEKVEEMVKKRVQKKAETFGQEV 755
Score = 142 bits (305), Expect = 1e-032
Identities = 78/150 (52%), Positives = 87/150 (58%)
Frame = +1 / -2
Query: 304 FTSCPKILALASTLCSIARSTVSYVRRFMS*SRSWAIMAGV*ASGDS*NLASATNFP*WI 483
FTSCP + A TL ST S V F+ S S A +AG *+ G S NL SATN P* I
Sbjct: 757 FTSCPNVSAFFCTLFLTISSTFSNVNSFIKASLS*ARIAGS*SCGASLNLTSATNLP**I 578
Query: 484 LLESACKQVVSQRALDPALPSLPSFTNLGRSSSKYIFQISLLILIESAMGCKTLGYCIGG 663
LLE ACKQ S A+D LPS P TN G +S K I QI LL+L + A+GCK GY G
Sbjct: 577 LLERACKQARSLAAVDG*LPSSPGLTNKGSNSLK*ISQICLLMLTDRALGCKADGYLCVG 398
Query: 664 NRGSGRSLEKKGCSSGPLYLPTCAWSFSVS 753
G KKG SSG YLPT AW SVS
Sbjct: 397 KTE*GMFSRKKGFSSGYSYLPTLAWMISVS 308
Score = 31.3 bits (62), Expect(2) = 1e-057
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -3 / +3
Query: 269 YKIVPSLVAELYSYRIMPLTKEVQIAY 189
YK+ P L + +Y ++PLTK V++ Y
Sbjct: 795 YKVDPLLASRIYGEWLIPLTKLVEVEY 875
>ref|NM_121125.2| Arabidopsis thaliana ATCM2; chorismate mutase AT5G10870 (ATCM2)
mRNA, complete cds
Length = 1041
Score = 214 bits (462), Expect(2) = 1e-057
Identities = 88/149 (59%), Positives = 111/149 (74%)
Frame = -3 / +3
Query: 752 ETEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDEL 573
ETE + A+VGRY+ P+E+PFF +++P P +YP LHP A S+NINK+IW +YF EL
Sbjct: 309 ETEIIQAKVGRYEYPEENPFFLENIPHSVFPTHKYPSALHPKALSVNINKQIWDIYFKEL 488
Query: 572 LPRLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQ 393
LP VK G DGN S+A D CLQALSRRIHYGKFVAE KF+++P+ Y PAI AQDR+
Sbjct: 489 LPLFVKPGDDGNYPSTAASDLACLQALSRRIHYGKFVAEVKFRDAPQDYEPAIRAQDREA 668
Query: 392 LMNLLTYETVERAIEHRVEAKAKIFGQEV 306
LM LLT+E VE ++ RV+ KA+ FGQEV
Sbjct: 669 LMKLLTFEKVEEMVKKRVQKKAETFGQEV 755
Score = 142 bits (305), Expect = 1e-032
Identities = 78/150 (52%), Positives = 87/150 (58%)
Frame = +1 / -3
Query: 304 FTSCPKILALASTLCSIARSTVSYVRRFMS*SRSWAIMAGV*ASGDS*NLASATNFP*WI 483
FTSCP + A TL ST S V F+ S S A +AG *+ G S NL SATN P* I
Sbjct: 757 FTSCPNVSAFFCTLFLTISSTFSNVNSFIKASLS*ARIAGS*SCGASLNLTSATNLP**I 578
Query: 484 LLESACKQVVSQRALDPALPSLPSFTNLGRSSSKYIFQISLLILIESAMGCKTLGYCIGG 663
LLE ACKQ S A+D LPS P TN G +S K I QI LL+L + A+GCK GY G
Sbjct: 577 LLERACKQARSLAAVDG*LPSSPGLTNKGSNSLK*ISQICLLMLTDRALGCKADGYLCVG 398
Query: 664 NRGSGRSLEKKGCSSGPLYLPTCAWSFSVS 753
G KKG SSG YLPT AW SVS
Sbjct: 397 KTE*GMFSRKKGFSSGYSYLPTLAWMISVS 308
Score = 31.3 bits (62), Expect(2) = 1e-057
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -3 / +3
Query: 269 YKIVPSLVAELYSYRIMPLTKEVQIAY 189
YK+ P L + +Y ++PLTK V++ Y
Sbjct: 795 YKVDPLLASRIYGEWLIPLTKLVEVEY 875
>emb|AX343933.1| Sequence 3 from Patent WO0200901
Length = 1006
Score = 214 bits (462), Expect(2) = 1e-057
Identities = 88/149 (59%), Positives = 111/149 (74%)
Frame = -3 / +1
Query: 752 ETEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDEL 573
ETE + A+VGRY+ P+E+PFF +++P P +YP LHP A S+NINK+IW +YF EL
Sbjct: 274 ETEIIQAKVGRYEYPEENPFFLENIPHSVFPTHKYPSALHPKALSVNINKQIWDIYFKEL 453
Query: 572 LPRLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQ 393
LP VK G DGN S+A D CLQALSRRIHYGKFVAE KF+++P+ Y PAI AQDR+
Sbjct: 454 LPLFVKPGDDGNYPSTAASDLACLQALSRRIHYGKFVAEVKFRDAPQDYEPAIRAQDREA 633
Query: 392 LMNLLTYETVERAIEHRVEAKAKIFGQEV 306
LM LLT+E VE ++ RV+ KA+ FGQEV
Sbjct: 634 LMKLLTFEKVEEMVKKRVQKKAETFGQEV 720
Score = 142 bits (305), Expect = 1e-032
Identities = 78/150 (52%), Positives = 87/150 (58%)
Frame = +1 / -3
Query: 304 FTSCPKILALASTLCSIARSTVSYVRRFMS*SRSWAIMAGV*ASGDS*NLASATNFP*WI 483
FTSCP + A TL ST S V F+ S S A +AG *+ G S NL SATN P* I
Sbjct: 722 FTSCPNVSAFFCTLFLTISSTFSNVNSFIKASLS*ARIAGS*SCGASLNLTSATNLP**I 543
Query: 484 LLESACKQVVSQRALDPALPSLPSFTNLGRSSSKYIFQISLLILIESAMGCKTLGYCIGG 663
LLE ACKQ S A+D LPS P TN G +S K I QI LL+L + A+GCK GY G
Sbjct: 542 LLERACKQARSLAAVDG*LPSSPGLTNKGSNSLK*ISQICLLMLTDRALGCKADGYLCVG 363
Query: 664 NRGSGRSLEKKGCSSGPLYLPTCAWSFSVS 753
G KKG SSG YLPT AW SVS
Sbjct: 362 KTE*GMFSRKKGFSSGYSYLPTLAWMISVS 273
Score = 31.3 bits (62), Expect(2) = 1e-057
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -3 / +1
Query: 269 YKIVPSLVAELYSYRIMPLTKEVQIAY 189
YK+ P L + +Y ++PLTK V++ Y
Sbjct: 760 YKVDPLLASRIYGEWLIPLTKLVEVEY 840
>emb|AX464575.1| Sequence 3 from Patent WO0202798
Length = 1006
Score = 214 bits (462), Expect(2) = 1e-057
Identities = 88/149 (59%), Positives = 111/149 (74%)
Frame = -3 / +1
Query: 752 ETEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDEL 573
ETE + A+VGRY+ P+E+PFF +++P P +YP LHP A S+NINK+IW +YF EL
Sbjct: 274 ETEIIQAKVGRYEYPEENPFFLENIPHSVFPTHKYPSALHPKALSVNINKQIWDIYFKEL 453
Query: 572 LPRLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQ 393
LP VK G DGN S+A D CLQALSRRIHYGKFVAE KF+++P+ Y PAI AQDR+
Sbjct: 454 LPLFVKPGDDGNYPSTAASDLACLQALSRRIHYGKFVAEVKFRDAPQDYEPAIRAQDREA 633
Query: 392 LMNLLTYETVERAIEHRVEAKAKIFGQEV 306
LM LLT+E VE ++ RV+ KA+ FGQEV
Sbjct: 634 LMKLLTFEKVEEMVKKRVQKKAETFGQEV 720
Score = 142 bits (305), Expect = 1e-032
Identities = 78/150 (52%), Positives = 87/150 (58%)
Frame = +1 / -3
Query: 304 FTSCPKILALASTLCSIARSTVSYVRRFMS*SRSWAIMAGV*ASGDS*NLASATNFP*WI 483
FTSCP + A TL ST S V F+ S S A +AG *+ G S NL SATN P* I
Sbjct: 722 FTSCPNVSAFFCTLFLTISSTFSNVNSFIKASLS*ARIAGS*SCGASLNLTSATNLP**I 543
Query: 484 LLESACKQVVSQRALDPALPSLPSFTNLGRSSSKYIFQISLLILIESAMGCKTLGYCIGG 663
LLE ACKQ S A+D LPS P TN G +S K I QI LL+L + A+GCK GY G
Sbjct: 542 LLERACKQARSLAAVDG*LPSSPGLTNKGSNSLK*ISQICLLMLTDRALGCKADGYLCVG 363
Query: 664 NRGSGRSLEKKGCSSGPLYLPTCAWSFSVS 753
G KKG SSG YLPT AW SVS
Sbjct: 362 KTE*GMFSRKKGFSSGYSYLPTLAWMISVS 273
Score = 31.3 bits (62), Expect(2) = 1e-057
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -3 / +1
Query: 269 YKIVPSLVAELYSYRIMPLTKEVQIAY 189
YK+ P L + +Y ++PLTK V++ Y
Sbjct: 760 YKVDPLLASRIYGEWLIPLTKLVEVEY 840
>emb|AX464581.1| Sequence 9 from Patent WO0202798
Length = 1006
Score = 214 bits (462), Expect(2) = 1e-057
Identities = 88/149 (59%), Positives = 111/149 (74%)
Frame = -3 / -1
Query: 752 ETEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDEL 573
ETE + A+VGRY+ P+E+PFF +++P P +YP LHP A S+NINK+IW +YF EL
Sbjct: 733 ETEIIQAKVGRYEYPEENPFFLENIPHSVFPTHKYPSALHPKALSVNINKQIWDIYFKEL 554
Query: 572 LPRLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQ 393
LP VK G DGN S+A D CLQALSRRIHYGKFVAE KF+++P+ Y PAI AQDR+
Sbjct: 553 LPLFVKPGDDGNYPSTAASDLACLQALSRRIHYGKFVAEVKFRDAPQDYEPAIRAQDREA 374
Query: 392 LMNLLTYETVERAIEHRVEAKAKIFGQEV 306
LM LLT+E VE ++ RV+ KA+ FGQEV
Sbjct: 373 LMKLLTFEKVEEMVKKRVQKKAETFGQEV 287
Score = 142 bits (305), Expect = 1e-032
Identities = 78/150 (52%), Positives = 87/150 (58%)
Frame = +1 / +3
Query: 304 FTSCPKILALASTLCSIARSTVSYVRRFMS*SRSWAIMAGV*ASGDS*NLASATNFP*WI 483
FTSCP + A TL ST S V F+ S S A +AG *+ G S NL SATN P* I
Sbjct: 285 FTSCPNVSAFFCTLFLTISSTFSNVNSFIKASLS*ARIAGS*SCGASLNLTSATNLP**I 464
Query: 484 LLESACKQVVSQRALDPALPSLPSFTNLGRSSSKYIFQISLLILIESAMGCKTLGYCIGG 663
LLE ACKQ S A+D LPS P TN G +S K I QI LL+L + A+GCK GY G
Sbjct: 465 LLERACKQARSLAAVDG*LPSSPGLTNKGSNSLK*ISQICLLMLTDRALGCKADGYLCVG 644
Query: 664 NRGSGRSLEKKGCSSGPLYLPTCAWSFSVS 753
G KKG SSG YLPT AW SVS
Sbjct: 645 KTE*GMFSRKKGFSSGYSYLPTLAWMISVS 734
Score = 31.3 bits (62), Expect(2) = 1e-057
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -3 / -1
Query: 269 YKIVPSLVAELYSYRIMPLTKEVQIAY 189
YK+ P L + +Y ++PLTK V++ Y
Sbjct: 247 YKVDPLLASRIYGEWLIPLTKLVEVEY 167
>gb|L47355.1| Arabidopsis thaliana chorismate mutase mRNA, complete cds
Length = 1006
Score = 214 bits (462), Expect(2) = 1e-057
Identities = 88/149 (59%), Positives = 111/149 (74%)
Frame = -3 / +1
Query: 752 ETEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDEL 573
ETE + A+VGRY+ P+E+PFF +++P P +YP LHP A S+NINK+IW +YF EL
Sbjct: 274 ETEIIQAKVGRYEYPEENPFFLENIPHSVFPTHKYPSALHPKALSVNINKQIWDIYFKEL 453
Query: 572 LPRLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQ 393
LP VK G DGN S+A D CLQALSRRIHYGKFVAE KF+++P+ Y PAI AQDR+
Sbjct: 454 LPLFVKPGDDGNYPSTAASDLACLQALSRRIHYGKFVAEVKFRDAPQDYEPAIRAQDREA 633
Query: 392 LMNLLTYETVERAIEHRVEAKAKIFGQEV 306
LM LLT+E VE ++ RV+ KA+ FGQEV
Sbjct: 634 LMKLLTFEKVEEMVKKRVQKKAETFGQEV 720
Score = 142 bits (305), Expect = 1e-032
Identities = 78/150 (52%), Positives = 87/150 (58%)
Frame = +1 / -3
Query: 304 FTSCPKILALASTLCSIARSTVSYVRRFMS*SRSWAIMAGV*ASGDS*NLASATNFP*WI 483
FTSCP + A TL ST S V F+ S S A +AG *+ G S NL SATN P* I
Sbjct: 722 FTSCPNVSAFFCTLFLTISSTFSNVNSFIKASLS*ARIAGS*SCGASLNLTSATNLP**I 543
Query: 484 LLESACKQVVSQRALDPALPSLPSFTNLGRSSSKYIFQISLLILIESAMGCKTLGYCIGG 663
LLE ACKQ S A+D LPS P TN G +S K I QI LL+L + A+GCK GY G
Sbjct: 542 LLERACKQARSLAAVDG*LPSSPGLTNKGSNSLK*ISQICLLMLTDRALGCKADGYLCVG 363
Query: 664 NRGSGRSLEKKGCSSGPLYLPTCAWSFSVS 753
G KKG SSG YLPT AW SVS
Sbjct: 362 KTE*GMFSRKKGFSSGYSYLPTLAWMISVS 273
Score = 31.3 bits (62), Expect(2) = 1e-057
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -3 / +1
Query: 269 YKIVPSLVAELYSYRIMPLTKEVQIAY 189
YK+ P L + +Y ++PLTK V++ Y
Sbjct: 760 YKVDPLLASRIYGEWLIPLTKLVEVEY 840
>gb|AY133840.1| Arabidopsis thaliana clone U18739 putative chorismate mutase CM2
(At5g10870) mRNA, complete cds
Length = 829
Score = 214 bits (462), Expect(2) = 1e-057
Identities = 88/149 (59%), Positives = 111/149 (74%)
Frame = -3 / +1
Query: 752 ETEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDEL 573
ETE + A+VGRY+ P+E+PFF +++P P +YP LHP A S+NINK+IW +YF EL
Sbjct: 211 ETEIIQAKVGRYEYPEENPFFLENIPHSVFPTHKYPSALHPKALSVNINKQIWDIYFKEL 390
Query: 572 LPRLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQ 393
LP VK G DGN S+A D CLQALSRRIHYGKFVAE KF+++P+ Y PAI AQDR+
Sbjct: 391 LPLFVKPGDDGNYPSTAASDLACLQALSRRIHYGKFVAEVKFRDAPQDYEPAIRAQDREA 570
Query: 392 LMNLLTYETVERAIEHRVEAKAKIFGQEV 306
LM LLT+E VE ++ RV+ KA+ FGQEV
Sbjct: 571 LMKLLTFEKVEEMVKKRVQKKAETFGQEV 657
Score = 142 bits (305), Expect = 1e-032
Identities = 78/150 (52%), Positives = 87/150 (58%)
Frame = +1 / -3
Query: 304 FTSCPKILALASTLCSIARSTVSYVRRFMS*SRSWAIMAGV*ASGDS*NLASATNFP*WI 483
FTSCP + A TL ST S V F+ S S A +AG *+ G S NL SATN P* I
Sbjct: 659 FTSCPNVSAFFCTLFLTISSTFSNVNSFIKASLS*ARIAGS*SCGASLNLTSATNLP**I 480
Query: 484 LLESACKQVVSQRALDPALPSLPSFTNLGRSSSKYIFQISLLILIESAMGCKTLGYCIGG 663
LLE ACKQ S A+D LPS P TN G +S K I QI LL+L + A+GCK GY G
Sbjct: 479 LLERACKQARSLAAVDG*LPSSPGLTNKGSNSLK*ISQICLLMLTDRALGCKADGYLCVG 300
Query: 664 NRGSGRSLEKKGCSSGPLYLPTCAWSFSVS 753
G KKG SSG YLPT AW SVS
Sbjct: 299 KTE*GMFSRKKGFSSGYSYLPTLAWMISVS 210
Score = 31.3 bits (62), Expect(2) = 1e-057
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -3 / +1
Query: 269 YKIVPSLVAELYSYRIMPLTKEVQIAY 189
YK+ P L + +Y ++PLTK V++ Y
Sbjct: 697 YKVDPLLASRIYGEWLIPLTKLVEVEY 777
>emb|AX506277.1| Sequence 972 from Patent WO0216655
Length = 798
Score = 214 bits (462), Expect(2) = 1e-057
Identities = 88/149 (59%), Positives = 111/149 (74%)
Frame = -3 / +1
Query: 752 ETEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDEL 573
ETE + A+VGRY+ P+E+PFF +++P P +YP LHP A S+NINK+IW +YF EL
Sbjct: 211 ETEIIQAKVGRYEYPEENPFFLENIPHSVFPTHKYPSALHPKALSVNINKQIWDIYFKEL 390
Query: 572 LPRLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQ 393
LP VK G DGN S+A D CLQALSRRIHYGKFVAE KF+++P+ Y PAI AQDR+
Sbjct: 391 LPLFVKPGDDGNYPSTAASDLACLQALSRRIHYGKFVAEVKFRDAPQDYEPAIRAQDREA 570
Query: 392 LMNLLTYETVERAIEHRVEAKAKIFGQEV 306
LM LLT+E VE ++ RV+ KA+ FGQEV
Sbjct: 571 LMKLLTFEKVEEMVKKRVQKKAETFGQEV 657
Score = 142 bits (305), Expect = 1e-032
Identities = 78/150 (52%), Positives = 87/150 (58%)
Frame = +1 / -2
Query: 304 FTSCPKILALASTLCSIARSTVSYVRRFMS*SRSWAIMAGV*ASGDS*NLASATNFP*WI 483
FTSCP + A TL ST S V F+ S S A +AG *+ G S NL SATN P* I
Sbjct: 659 FTSCPNVSAFFCTLFLTISSTFSNVNSFIKASLS*ARIAGS*SCGASLNLTSATNLP**I 480
Query: 484 LLESACKQVVSQRALDPALPSLPSFTNLGRSSSKYIFQISLLILIESAMGCKTLGYCIGG 663
LLE ACKQ S A+D LPS P TN G +S K I QI LL+L + A+GCK GY G
Sbjct: 479 LLERACKQARSLAAVDG*LPSSPGLTNKGSNSLK*ISQICLLMLTDRALGCKADGYLCVG 300
Query: 664 NRGSGRSLEKKGCSSGPLYLPTCAWSFSVS 753
G KKG SSG YLPT AW SVS
Sbjct: 299 KTE*GMFSRKKGFSSGYSYLPTLAWMISVS 210
Score = 31.3 bits (62), Expect(2) = 1e-057
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -3 / +1
Query: 269 YKIVPSLVAELYSYRIMPLTKEVQIAY 189
YK+ P L + +Y ++PLTK V++ Y
Sbjct: 697 YKVDPLLASRIYGEWLIPLTKLVEVEY 777
>gb|AV541889.1|AV541889 AV541889 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ172h08F 3', mRNA sequence
Length = 591
Score = 210 bits (452), Expect = 6e-053
Identities = 90/134 (67%), Positives = 103/134 (76%)
Frame = -3 / -1
Query: 590 MYFDELLPRLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAII 411
MYF LL RLVK G DGN GS+ALCDT CLQ LS+RIH+GKFVAEAKF+E+P AY AI
Sbjct: 588 MYFKHLLXRLVKPGDDGNCGSAALCDTMCLQILSKRIHFGKFVAEAKFRENPAAYETAIK 409
Query: 410 AQDRDQLMNLLTYETVERAIEHRVEAKAKIFGQEVNIGVEDNGSPPVYKIVPSLVAELYS 231
QDR QLM LLTYETVE ++ RVE KA+IFGQ++ I + + P YKI PSLVA+LY
Sbjct: 408 EQDRTQLMQLLTYETVEEVVKKRVEIKARIFGQDITINDPETEADPSYKIQPSLVAKLYG 229
Query: 230 YRIMPLTKEVQIAY 189
RIMPLTKEVQI Y
Sbjct: 228 ERIMPLTKEVQIEY 187
Score = 144 bits (309), Expect = 3e-033
Identities = 80/140 (57%), Positives = 92/140 (65%)
Frame = +1 / +2
Query: 172 SSLLSKYAI*TSLVSGMIL*LYSSATKLGTILYTGGLPLSSTPMFTSCPKILALASTLCS 351
SSLLSKY+I TS V GMIL S ATKLG IL G +S + + S PKILAL STL
Sbjct: 170 SSLLSKYSIWTSFVRGMILSP*SFATKLGCIL*EGSASVSGSLIVMS*PKILALISTLFL 349
Query: 352 IARSTVSYVRRFMS*SRSWAIMAGV*ASGDS*NLASATNFP*WILLESACKQVVSQRALD 531
STVSYVR +S RS +++A *A+G S NLASATN P IL ES CK +VSQRA +
Sbjct: 350 TTSSTVSYVRSCISCVRSCSLIAVS*AAGFSRNLASATNLPK*ILFESICKHIVSQRAAE 529
Query: 532 PALPSLPSFTNLGRSSSKYI 591
P LPS P T+L R KYI
Sbjct: 530 PQLPSSPGLTSLXRRCLKYI 589
>emb|AX464577.1| Sequence 5 from Patent WO0202798
Length = 5099
Score = 85.8 bits (181), Expect(4) = 3e-049
Identities = 34/51 (66%), Positives = 40/51 (78%)
Frame = -3 / +2
Query: 641 VLHPIADSININKEIWKMYFDELLPRLVKEGSDGNAGSSALCDTTCLQALS 489
VLH ADSININK+IW MYF +L+PRLVK+G DGN S+A+CD CLQ S
Sbjct: 3941 VLHFAADSININKKIWNMYFRDLVPRLVKKGDDGNYXSTAVCDAICLQVCS 4093
Score = 68.9 bits (144), Expect(4) = 3e-049
Identities = 24/32 (75%), Positives = 28/32 (87%)
Frame = -3 / +1
Query: 728 VGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLH 633
VGR+K PDEHPFF DLPEP LPP+QYP+VL+
Sbjct: 3682 VGRFKSPDEHPFFPDDLPEPMLPPLQYPKVLN 3777
Score = 64.8 bits (135), Expect(4) = 3e-049
Identities = 30/44 (68%), Positives = 31/44 (70%)
Frame = -3 / +2
Query: 503 LQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQLMNLLTY 372
LQ LS+RIHYGKFVAEAKFQ SPEAY AI AQ LTY
Sbjct: 4199 LQCLSKRIHYGKFVAEAKFQASPEAYESAIKAQVFIYFSKALTY 4330
Score = 55.1 bits (114), Expect(4) = 6e-030
Identities = 25/51 (49%), Positives = 32/51 (62%)
Frame = +1 / -3
Query: 490 ESACKQVVSQRALDPALPSLPSFTNLGRSSSKYIFQISLLILIESAMGCKT 642
E +Q+ SQ A++ LPS P FT+LG S KY+F I L + IESA C T
Sbjct: 4092 EQT*RQIASQTAVEX*LPSSPFFTSLGTRSLKYMFHIFLFMFIESAAKCNT 3940
Score = 52.4 bits (108), Expect(4) = 6e-030
Identities = 25/43 (58%), Positives = 29/43 (67%)
Frame = +1 / -3
Query: 373 YVRRFMS*SRSWAIMAGV*ASGDS*NLASATNFP*WILLESAC 501
YVR * + A+MA ASG++*NLASATN P*WIL E C
Sbjct: 4329 YVRALEK*INTCALMADSYASGEA*NLASATNLP*WILFERHC 4201
Score = 49.6 bits (102), Expect(4) = 6e-030
Identities = 24/38 (63%), Positives = 26/38 (68%)
Frame = +1 / -1
Query: 640 TLGYCIGGNRGSGRSLEKKGCSSGPLYLPTCAWSFSVS 753
T GY GGN GSGRS KKGCSSG L LPT + S + S
Sbjct: 3770 TFGY*RGGNIGSGRSSGKKGCSSGLLNLPT*SSSITKS 3657
Score = 46.9 bits (96), Expect(4) = 3e-049
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = -3 / +3
Query: 332 KAKIFGQEVNIGVEDNGSPPVYKIVPSLVAELYSYRIMPLTKEVQIAY 189
+ K+ +E E+ VYKI P LV +LY IMPLTKEVQ+ Y
Sbjct: 4485 EVKVGMEEKEEEEEEGNESHVYKISPILVGDLYGDWIMPLTKEVQVEY 4628
Score = 43.2 bits (88), Expect(4) = 6e-030
Identities = 22/34 (64%), Positives = 24/34 (70%)
Frame = +1 / -2
Query: 172 SSLLSKYAI*TSLVSGMIL*LYSSATKLGTILYT 273
SSLLSKY+ *TS V GMI Y S TK+G IL T
Sbjct: 4645 SSLLSKYST*TSFVKGMIQSPYKSPTKIGLIL*T 4544
>emb|AJ242647.1|ATH242647 Arabidopsis thaliana CM1 gene for plastidic chorismate mutase, exons
1-6
Length = 5099
Score = 85.8 bits (181), Expect(4) = 3e-049
Identities = 34/51 (66%), Positives = 40/51 (78%)
Frame = -3 / +2
Query: 641 VLHPIADSININKEIWKMYFDELLPRLVKEGSDGNAGSSALCDTTCLQALS 489
VLH ADSININK+IW MYF +L+PRLVK+G DGN S+A+CD CLQ S
Sbjct: 3941 VLHFAADSININKKIWNMYFRDLVPRLVKKGDDGNYXSTAVCDAICLQVCS 4093
Score = 68.9 bits (144), Expect(4) = 3e-049
Identities = 24/32 (75%), Positives = 28/32 (87%)
Frame = -3 / +1
Query: 728 VGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLH 633
VGR+K PDEHPFF DLPEP LPP+QYP+VL+
Sbjct: 3682 VGRFKSPDEHPFFPDDLPEPMLPPLQYPKVLN 3777
Score = 64.8 bits (135), Expect(4) = 3e-049
Identities = 30/44 (68%), Positives = 31/44 (70%)
Frame = -3 / +2
Query: 503 LQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQLMNLLTY 372
LQ LS+RIHYGKFVAEAKFQ SPEAY AI AQ LTY
Sbjct: 4199 LQCLSKRIHYGKFVAEAKFQASPEAYESAIKAQVFIYFSKALTY 4330
Score = 55.1 bits (114), Expect(4) = 6e-030
Identities = 25/51 (49%), Positives = 32/51 (62%)
Frame = +1 / -3
Query: 490 ESACKQVVSQRALDPALPSLPSFTNLGRSSSKYIFQISLLILIESAMGCKT 642
E +Q+ SQ A++ LPS P FT+LG S KY+F I L + IESA C T
Sbjct: 4092 EQT*RQIASQTAVEX*LPSSPFFTSLGTRSLKYMFHIFLFMFIESAAKCNT 3940
Score = 52.4 bits (108), Expect(4) = 6e-030
Identities = 25/43 (58%), Positives = 29/43 (67%)
Frame = +1 / -3
Query: 373 YVRRFMS*SRSWAIMAGV*ASGDS*NLASATNFP*WILLESAC 501
YVR * + A+MA ASG++*NLASATN P*WIL E C
Sbjct: 4329 YVRALEK*INTCALMADSYASGEA*NLASATNLP*WILFERHC 4201
Score = 49.6 bits (102), Expect(4) = 6e-030
Identities = 24/38 (63%), Positives = 26/38 (68%)
Frame = +1 / -1
Query: 640 TLGYCIGGNRGSGRSLEKKGCSSGPLYLPTCAWSFSVS 753
T GY GGN GSGRS KKGCSSG L LPT + S + S
Sbjct: 3770 TFGY*RGGNIGSGRSSGKKGCSSGLLNLPT*SSSITKS 3657
Score = 46.9 bits (96), Expect(4) = 3e-049
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = -3 / +3
Query: 332 KAKIFGQEVNIGVEDNGSPPVYKIVPSLVAELYSYRIMPLTKEVQIAY 189
+ K+ +E E+ VYKI P LV +LY IMPLTKEVQ+ Y
Sbjct: 4485 EVKVGMEEKEEEEEEGNESHVYKISPILVGDLYGDWIMPLTKEVQVEY 4628
Score = 43.2 bits (88), Expect(4) = 6e-030
Identities = 22/34 (64%), Positives = 24/34 (70%)
Frame = +1 / -2
Query: 172 SSLLSKYAI*TSLVSGMIL*LYSSATKLGTILYT 273
SSLLSKY+ *TS V GMI Y S TK+G IL T
Sbjct: 4645 SSLLSKYST*TSFVKGMIQSPYKSPTKIGLIL*T 4544
>dbj|AB026657.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MXO21
Length = 77401
Score = 89.0 bits (188), Expect(4) = 9e-047
Identities = 35/51 (68%), Positives = 41/51 (80%)
Frame = -3 / -3
Query: 641 VLHPIADSININKEIWKMYFDELLPRLVKEGSDGNAGSSALCDTTCLQALS 489
VLH ADSININK+IW MYF +L+PRLVK+G DGN GS+A+CD CLQ S
Sbjct: 10937 VLHFAADSININKKIWNMYFRDLVPRLVKKGDDGNYGSTAVCDAICLQVCS 10785
Score = 68.9 bits (144), Expect(4) = 9e-047
Identities = 24/32 (75%), Positives = 28/32 (87%)
Frame = -3 / -2
Query: 728 VGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLH 633
VGR+K PDEHPFF DLPEP LPP+QYP+VL+
Sbjct: 11196 VGRFKSPDEHPFFPDDLPEPMLPPLQYPKVLN 11101
Score = 64.8 bits (135), Expect(4) = 9e-047
Identities = 30/44 (68%), Positives = 31/44 (70%)
Frame = -3 / -3
Query: 503 LQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQLMNLLTY 372
LQ LS+RIHYGKFVAEAKFQ SPEAY AI AQ LTY
Sbjct: 10679 LQCLSKRIHYGKFVAEAKFQASPEAYESAIKAQVFIYFSKALTY 10548
Score = 59.3 bits (123), Expect(4) = 2e-028
Identities = 26/51 (50%), Positives = 33/51 (64%)
Frame = +1 / +1
Query: 490 ESACKQVVSQRALDPALPSLPSFTNLGRSSSKYIFQISLLILIESAMGCKT 642
E +Q+ SQ A++P LPS P FT+LG S KY+F I L + IESA C T
Sbjct: 10786 EQT*RQIASQTAVEP*LPSSPFFTSLGTRSLKYMFHIFLFMFIESAAKCNT 10938
Score = 52.4 bits (108), Expect(4) = 2e-028
Identities = 25/43 (58%), Positives = 29/43 (67%)
Frame = +1 / +1
Query: 373 YVRRFMS*SRSWAIMAGV*ASGDS*NLASATNFP*WILLESAC 501
YVR * + A+MA ASG++*NLASATN P*WIL E C
Sbjct: 10549 YVRALEK*INTCALMADSYASGEA*NLASATNLP*WILFERHC 10677
Score = 49.6 bits (102), Expect(4) = 2e-028
Identities = 24/38 (63%), Positives = 26/38 (68%)
Frame = +1 / +2
Query: 640 TLGYCIGGNRGSGRSLEKKGCSSGPLYLPTCAWSFSVS 753
T GY GGN GSGRS KKGCSSG L LPT + S + S
Sbjct: 11108 TFGY*RGGNIGSGRSSGKKGCSSGLLNLPT*SSSITKS 11221
Score = 46.9 bits (96), Expect(4) = 9e-047
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = -3 / -1
Query: 332 KAKIFGQEVNIGVEDNGSPPVYKIVPSLVAELYSYRIMPLTKEVQIAY 189
+ K+ +E E+ VYKI P LV +LY IMPLTKEVQ+ Y
Sbjct: 10393 EVKVGMEEKEEEEEEGNESHVYKISPILVGDLYGDWIMPLTKEVQVEY 10250
Score = 45.5 bits (93), Expect(4) = 2e-028
Identities = 23/35 (65%), Positives = 25/35 (71%)
Frame = +1 / +3
Query: 169 QSSLLSKYAI*TSLVSGMIL*LYSSATKLGTILYT 273
QSSLLSKY+ *TS V GMI Y S TK+G IL T
Sbjct: 10230 QSSLLSKYST*TSFVKGMIQSPYKSPTKIGLIL*T 10334
>emb|AL365234.1|ATT30N20 Arabidopsis thaliana DNA chromosome 5, BAC clone T30N20 (ESSA project)
Length = 98473
Score = 71.2 bits (149), Expect(5) = 2e-042
Identities = 29/47 (61%), Positives = 33/47 (70%)
Frame = -3 / -2
Query: 638 LHPIADSININKEIWKMYFDELLPRLVKEGSDGNAGSSALCDTTCLQ 498
LHP A S+NINK+IW +YF ELLP VK G DGN S+A D CLQ
Sbjct: 38967 LHPKALSVNINKQIWDIYFKELLPLFVKPGDDGNYPSTAASDLACLQ 38827
Score = 58.3 bits (121), Expect(5) = 2e-042
Identities = 23/32 (71%), Positives = 28/32 (87%)
Frame = -3 / -1
Query: 500 QALSRRIHYGKFVAEAKFQESPEAYTPAIIAQ 405
+ALSRRIHYGKFVAE KF+++P+ Y PAI AQ
Sbjct: 38743 KALSRRIHYGKFVAEVKFRDAPQDYEPAIRAQ 38648
Score = 47.3 bits (97), Expect(5) = 2e-042
Identities = 19/33 (57%), Positives = 25/33 (75%)
Frame = -3 / -3
Query: 404 DRDQLMNLLTYETVERAIEHRVEAKAKIFGQEV 306
DR+ LM LLT+E VE ++ RV+ KA+ FGQEV
Sbjct: 38558 DREALMKLLTFEKVEEMVKKRVQKKAETFGQEV 38460
Score = 40.0 bits (81), Expect(5) = 2e-042
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = -3 / -3
Query: 728 VGRYKGPDEHPFFSKDLPEPRLPPMQYPRV 639
VGRY+ P+E+PFF +++P P +YP V
Sbjct: 39140 VGRYEYPEENPFFLENIPHSVFPTHKYPSV 39051
Score = 31.3 bits (62), Expect(5) = 2e-042
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -3 / -3
Query: 269 YKIVPSLVAELYSYRIMPLTKEVQIAY 189
YK+ P L + +Y ++PLTK V++ Y
Sbjct: 38420 YKVDPLLASRIYGEWLIPLTKLVEVEY 38340
>emb|AJ242648.1|ATH242648 Arabidopsis thaliana CM2 gene for cytosolic chorismate mutase, exons
1-6
Length = 5177
Score = 71.2 bits (149), Expect(5) = 2e-042
Identities = 29/47 (61%), Positives = 33/47 (70%)
Frame = -3 / +1
Query: 638 LHPIADSININKEIWKMYFDELLPRLVKEGSDGNAGSSALCDTTCLQ 498
LHP A S+NINK+IW +YF ELLP VK G DGN S+A D CLQ
Sbjct: 3472 LHPKALSVNINKQIWDIYFKELLPLFVKPGDDGNYPSTAASDLACLQ 3612
Score = 58.3 bits (121), Expect(5) = 2e-042
Identities = 23/32 (71%), Positives = 28/32 (87%)
Frame = -3 / +3
Query: 500 QALSRRIHYGKFVAEAKFQESPEAYTPAIIAQ 405
+ALSRRIHYGKFVAE KF+++P+ Y PAI AQ
Sbjct: 3696 KALSRRIHYGKFVAEVKFRDAPQDYEPAIRAQ 3791
Score = 47.3 bits (97), Expect(5) = 2e-042
Identities = 19/33 (57%), Positives = 25/33 (75%)
Frame = -3 / +2
Query: 404 DRDQLMNLLTYETVERAIEHRVEAKAKIFGQEV 306
DR+ LM LLT+E VE ++ RV+ KA+ FGQEV
Sbjct: 3881 DREALMKLLTFEKVEEMVKKRVQKKAETFGQEV 3979
Score = 40.0 bits (81), Expect(5) = 2e-042
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = -3 / +2
Query: 728 VGRYKGPDEHPFFSKDLPEPRLPPMQYPRV 639
VGRY+ P+E+PFF +++P P +YP V
Sbjct: 3299 VGRYEYPEENPFFLENIPHSVFPTHKYPSV 3388
Score = 31.3 bits (62), Expect(5) = 2e-042
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -3 / +2
Query: 269 YKIVPSLVAELYSYRIMPLTKEVQIAY 189
YK+ P L + +Y ++PLTK V++ Y
Sbjct: 4019 YKVDPLLASRIYGEWLIPLTKLVEVEY 4099
>emb|AX464578.1| Sequence 6 from Patent WO0202798
Length = 5176
Score = 71.2 bits (149), Expect(5) = 2e-042
Identities = 29/47 (61%), Positives = 33/47 (70%)
Frame = -3 / +3
Query: 638 LHPIADSININKEIWKMYFDELLPRLVKEGSDGNAGSSALCDTTCLQ 498
LHP A S+NINK+IW +YF ELLP VK G DGN S+A D CLQ
Sbjct: 3471 LHPKALSVNINKQIWDIYFKELLPLFVKPGDDGNYPSTAASDLACLQ 3611
Score = 58.3 bits (121), Expect(5) = 2e-042
Identities = 23/32 (71%), Positives = 28/32 (87%)
Frame = -3 / +2
Query: 500 QALSRRIHYGKFVAEAKFQESPEAYTPAIIAQ 405
+ALSRRIHYGKFVAE KF+++P+ Y PAI AQ
Sbjct: 3695 KALSRRIHYGKFVAEVKFRDAPQDYEPAIRAQ 3790
Score = 47.3 bits (97), Expect(5) = 2e-042
Identities = 19/33 (57%), Positives = 25/33 (75%)
Frame = -3 / +1
Query: 404 DRDQLMNLLTYETVERAIEHRVEAKAKIFGQEV 306
DR+ LM LLT+E VE ++ RV+ KA+ FGQEV
Sbjct: 3880 DREALMKLLTFEKVEEMVKKRVQKKAETFGQEV 3978
Score = 40.0 bits (81), Expect(5) = 2e-042
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = -3 / +1
Query: 728 VGRYKGPDEHPFFSKDLPEPRLPPMQYPRV 639
VGRY+ P+E+PFF +++P P +YP V
Sbjct: 3298 VGRYEYPEENPFFLENIPHSVFPTHKYPSV 3387
Score = 31.3 bits (62), Expect(5) = 2e-042
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -3 / +1
Query: 269 YKIVPSLVAELYSYRIMPLTKEVQIAY 189
YK+ P L + +Y ++PLTK V++ Y
Sbjct: 4018 YKVDPLLASRIYGEWLIPLTKLVEVEY 4098
>gb|BX840350.1|BX840350 BX840350 Arabidopsis thaliana Hormone Treated Callus Col-0
Arabidopsis thaliana cDNA clone GSLTPGH49ZE03 5PRIM,
mRNA sequence
Length = 1044
Score = 138 bits (297), Expect(2) = 5e-035
Identities = 59/113 (52%), Positives = 77/113 (68%)
Frame = -3 / +2
Query: 692 FSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDELLPRLVKEGSDGNAGSSALCD 513
F D PEP LPP+QYP+VLH A SIN NK+ W MYF +L+PR VK+ DGN G++ + D
Sbjct: 623 FPDDRPEPILPPLQYPKVLHFAAVSINKNKKFWNMYFRDLVPRFVKKCDDGNDGATVVGD 802
Query: 512 TTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQLMNLLTYETVERA 354
LQ S+RIHYG VAEA Q +PEA AI AQ++D +++ TY ++E A
Sbjct: 803 AIGLQFFSKRIHYGNCVAEANCQAAPEADESAIKAQEKDAFLDIRTYPSLEEA 961
Score = 108 bits (230), Expect = 2e-022
Identities = 56/117 (47%), Positives = 68/117 (58%)
Frame = +1 / -1
Query: 346 CSIARSTVSYVRRFMS*SRSWAIMAGV*ASGDS*NLASATNFP*WILLESACKQVVSQRA 525
C +A S YVR + S S A+MA ASG +* ASAT FP*WIL E + + S
Sbjct: 969 CFLASSRDGYVRISKNASFSCALMADSSASGAA*QFASATQFP*WILFEKN*RPIASPTT 790
Query: 526 LDPALPSLPSFTNLGRSSSKYIFQISLLILIESAMGCKTLGYCIGGNRGSGRSLEKK 696
+ P+ PS FTNLG S KY+FQ L + IE+A C T GY GG GSGRS K+
Sbjct: 789 VAPSFPSSHFFTNLGTRSLKYMFQNFLFLFIETAAKCNTFGY*RGGKIGSGRSSGKE 619
Score = 31.3 bits (62), Expect(2) = 5e-035
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = -3 / +3
Query: 749 TEKLHAQVGRYKGPDEHPFFS 687
T KLHA+VGR+K PD F S
Sbjct: 564 T*KLHAKVGRFKSPD*TSFLS 626
>gb|AI995910.1|AI995910 701549173 A. thaliana, Columbia Col-0, inflorescence-2 Arabidopsis
thaliana cDNA clone 701549173, mRNA sequence
Length = 461
Score = 87.2 bits (184), Expect(2) = 8e-030
Identities = 38/61 (62%), Positives = 44/61 (72%)
Frame = -3 / -1
Query: 485 RIHYGKFVAEAKFQESPEAYTPAIIAQDRDQLMNLLTYETVERAIEHRVEAKAKIFGQEV 306
RIH+GKFVAEAKF+E+P AY AI QDR QLM LLTYETVE ++ RVE K+ F
Sbjct: 461 RIHFGKFVAEAKFRENPAAYETAIKEQDRTQLMQLLTYETVEEVVKKRVEIKSXDFWSRH 282
Query: 305 N 303
N
Sbjct: 281 N 279
Score = 65.7 bits (137), Expect(2) = 8e-030
Identities = 28/45 (62%), Positives = 33/45 (73%)
Frame = -3 / -2
Query: 323 IFGQEVNIGVEDNGSPPVYKIVPSLVAELYSYRIMPLTKEVQIAY 189
IFGQ++ I + + P YKI PSLVA+LY RIMPLTKEVQI Y
Sbjct: 298 IFGQDITINDPETEADPSYKIQPSLVAKLYGERIMPLTKEVQIEY 164
>gb|T46455.1|T46455 9718 Lambda-PRL2 Arabidopsis thaliana cDNA clone 145F17T7, mRNA
sequence
Length = 465
Score = 129 bits (276), Expect(2) = 1e-029
Identities = 50/68 (73%), Positives = 57/68 (83%)
Frame = -3 / +1
Query: 752 ETEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDEL 573
ETEKLHA+V RYK PDEHPFF + LPEP LPP+QYP+VLH A+SININK++W MYF L
Sbjct: 109 ETEKLHAKVDRYKSPDEHPFFPQCLPEPILPPIQYPQVLHRCAESININKKVWNMYFKHL 288
Query: 572 LPRLVKEG 549
LPRLVK G
Sbjct: 289 LPRLVKPG 312
Score = 22.6 bits (43), Expect(2) = 1e-029
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3 / +2
Query: 569 PRLVKEGSDGNAGS 528
P L +G DGN GS
Sbjct: 293 PDLSSQGDDGNXGS 334
>gb|AW004329.1|AW004329 701956468 A. thaliana, mixed source Arabidopsis thaliana cDNA clone
701956468, mRNA sequence
Length = 500
Score = 105 bits (225), Expect(2) = 4e-024
Identities = 43/76 (56%), Positives = 54/76 (71%)
Frame = -3 / -2
Query: 521 LCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQLMNLLTYETVERAIEHR 342
+CD S+ IHYGKFVAEAKFQ SPEAY AI AQD+D LM++LT+ T E AI+ R
Sbjct: 499 VCDAXAFSVXSKXIHYGKFVAEAKFQASPEAYESAIKAQDKDALMDMLTFPTXEDAIKXR 320
Query: 341 VEAKAKIFGQEVNIGV 294
E K + +GQEV +G+
Sbjct: 319 XEMKTRTYGQEVKVGM 272
Score = 27.6 bits (54), Expect(2) = 4e-024
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = -2 / -1
Query: 270 VQDRSELGRRAVQLQNHAANQRGSNRVFA*EAGL 169
+Q++S+L + +HA N+RGS+ V A + GL
Sbjct: 227 LQNQSDLSW*LIWRLDHAFNKRGSSGVLAQKTGL 126
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 109 bits (232), Expect = 1e-022
Identities = 47/73 (64%), Positives = 55/73 (75%)
Frame = -3 / +1
Query: 407 QDRDQLMNLLTYETVERAIEHRVEAKAKIFGQEVNIGVEDNGSPPVYKIVPSLVAELYSY 228
QDR QLM LLTYETVE ++ RVE KA+IFGQ++ I + + P YKI PSLVA+LY
Sbjct: 26084983 QDRTQLMQLLTYETVEEVVKKRVEIKARIFGQDITINDPETEADPSYKIQPSLVAKLYGE 26085162
Query: 227 RIMPLTKEVQIAY 189
RIMPLTKEVQI Y
Sbjct: 26085163 RIMPLTKEVQIEY 26085201
>gb|BP793254.1|BP793254 BP793254 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-55-I17 3',
mRNA sequence
Length = 402
Score = 104 bits (221), Expect = 4e-021
Identities = 45/71 (63%), Positives = 53/71 (74%)
Frame = -3 / -2
Query: 401 RDQLMNLLTYETVERAIEHRVEAKAKIFGQEVNIGVEDNGSPPVYKIVPSLVAELYSYRI 222
R QLM LLTYETVE ++ RVE KA+IFGQ++ I + + P YKI PSLVA+LY RI
Sbjct: 401 RTQLMQLLTYETVEEVVKKRVEIKARIFGQDITINDPETEADPSYKIQPSLVAKLYGERI 222
Query: 221 MPLTKEVQIAY 189
MPLTKEVQI Y
Sbjct: 221 MPLTKEVQIEY 189
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,859,904,920
Number of Sequences: 1013581
Number of extensions: 30826074
Number of successful extensions: 229471
Number of sequences better than 1.0e-020: 48
length of database: 302,980,290
effective HSP length: 56
effective length of database: 246,219,754
effective search space used: 48259071784
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)