TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2521459.2.2
(850 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BT005306.1| Arabidopsis thaliana At1g69370 mRNA, complet... 196 9e-049
dbj|AK117860.1| Arabidopsis thaliana At1g69370 mRNA for put... 196 9e-049
ref|NM_105604.2| Arabidopsis thaliana CM3 (CHORISMATE MUTAS... 196 9e-049
gb|AF131219.1|AF131219 Arabidopsis thaliana chorismate muta... 190 4e-047
emb|AX464576.1| Sequence 4 from Patent WO0202798 190 4e-047
emb|AX464582.1| Sequence 10 from Patent WO0202798 190 4e-047
gb|AV541889.1|AV541889 AV541889 Arabidopsis thaliana roots ... 176 8e-043
emb|AX464574.1| Sequence 2 from Patent WO0202798 138 1e-042
emb|AX464580.1| Sequence 8 from Patent WO0202798 138 1e-042
emb|Z26519.1|ATCHMUT A.thaliana mRNA for chorismate mutase 138 1e-042
ref|NM_113844.3| Arabidopsis thaliana CM1; chorismate mutas... 138 2e-042
emb|AX506042.1| Sequence 737 from Patent WO0216655 138 2e-042
emb|BX822129.1|CNS0A727 Arabidopsis thaliana Full-length cD... 136 5e-042
emb|BX824460.1|CNS0A6WL Arabidopsis thaliana Full-length cD... 135 1e-041
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 116 4e-041
gb|AC073178.9|AC073178 Arabidopsis thaliana chromosome 1 BA... 116 4e-041
gb|AC018364.5|AC018364 Arabidopsis thaliana chromosome 1 BA... 116 4e-041
gb|AY089156.1| Arabidopsis thaliana clone 39613 mRNA, compl... 138 2e-038
gb|AY065238.1| Arabidopsis thaliana putative chorismate mut... 127 1e-036
ref|NM_121125.2| Arabidopsis thaliana ATCM2; chorismate mut... 127 1e-036
emb|AX343933.1| Sequence 3 from Patent WO0200901 127 1e-036
emb|AX464575.1| Sequence 3 from Patent WO0202798 127 1e-036
emb|AX464581.1| Sequence 9 from Patent WO0202798 127 1e-036
gb|L47355.1| Arabidopsis thaliana chorismate mutase mRNA, c... 127 1e-036
gb|AY133840.1| Arabidopsis thaliana clone U18739 putative c... 127 1e-036
emb|AX506277.1| Sequence 972 from Patent WO0216655 127 3e-036
dbj|AB026657.1| Arabidopsis thaliana genomic DNA, chromosom... 57 2e-035
emb|AX464577.1| Sequence 5 from Patent WO0202798 57 2e-034
emb|AJ242647.1|ATH242647 Arabidopsis thaliana CM1 gene for ... 57 2e-034
gb|BX840398.1|BX840398 BX840398 Arabidopsis thaliana Hormon... 138 3e-031
gb|AI995910.1|AI995910 701549173 A. thaliana, Columbia Col-... 79 2e-028
emb|AL365234.1|ATT30N20 Arabidopsis thaliana DNA chromosome... 48 1e-027
emb|AJ242648.1|ATH242648 Arabidopsis thaliana CM2 gene for ... 48 1e-027
emb|AX464578.1| Sequence 6 from Patent WO0202798 48 1e-027
gb|AW004329.1|AW004329 701956468 A. thaliana, mixed source ... 85 1e-026
gb|BX839097.1|BX839097 BX839097 Arabidopsis thaliana Adult ... 122 2e-026
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 116 1e-024
gb|BP793254.1|BP793254 BP793254 RAFL7 Arabidopsis thaliana ... 111 4e-023
>gb|BT005306.1| Arabidopsis thaliana At1g69370 mRNA, complete cds
Length = 951
Score = 196 bits (422), Expect = 9e-049
Identities = 89/161 (55%), Positives = 104/161 (64%)
Frame = -1 / +1
Query: 811 YXXXXHPXAXSINIXXXXWKMYFDXXLPXXXXXXSDGNAGSSALXXXTCLQXXSRRIXYG 632
Y H A SINI W MYF LP DGN GS+AL CLQ S+RI +G
Sbjct: 469 YPQVLHRCAESININKKVWNMYFKHLLPRLVKPGDDGNCGSAALCDTMCLQILSKRIHFG 648
Query: 631 KFXXXAKFQESPEAYTPAIIAQDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNIGAK 452
KF AKF+E+P AY AI QDR QLM LLT TVE V+ RVE KA+IFGQ++ I
Sbjct: 649 KFVAEAKFRENPAAYETAIKEQDRTQLMQLLTYETVEEVVKKRVEIKARIFGQDITINDP 828
Query: 451 DKGSPPVYKIRPSLVAELYSYRIMPLTKEVEVAYLLRRLD* 329
+ + P YKI+PSLVA+LY RIMPLTKEV++ YLLRRLD*
Sbjct: 829 ETEADPSYKIQPSLVAKLYGERIMPLTKEVQIEYLLRRLD* 951
Score = 97.7 bits (207), Expect(2) = 4e-023
Identities = 52/112 (46%), Positives = 60/112 (53%)
Frame = +3 / -2
Query: 477 PKILALASTLCSTARSTVXYVRRFMS*SRSWAIMAGV*ASGDS*NLAXXXNFPXXILLXX 656
PKILAL STL T STV YVR +S RS +++A *A+G S NLA N P IL
Sbjct: 803 PKILALISTLFLTTSSTVSYVRSCISCVRSCSLIAVS*AAGFSRNLASATNLPK*ILFES 624
Query: 657 XCKQVXSQRALDPALPSLXXXXXXGRXXSKYIFQXXXXILIXSAXGCXXXXY 812
CK + SQRA +P LPS GR KYIF + I SA C Y
Sbjct: 623 ICKHIVSQRAAEPQLPSSPGLTSLGRRCLKYIFHTFLLMFIDSAQRCKTCGY 468
Score = 32.7 bits (65), Expect(2) = 4e-023
Identities = 18/27 (66%), Positives = 19/27 (70%)
Frame = +3 / -2
Query: 333 SSLLSKYATSTSLVSGMIL*LYSSATK 413
SSLLSKY+ TS V GMIL S ATK
Sbjct: 947 SSLLSKYSIWTSFVRGMILSP*SFATK 867
>dbj|AK117860.1| Arabidopsis thaliana At1g69370 mRNA for putative chorismate mutase,
complete cds, clone: RAFL19-02-D09
Length = 1143
Score = 196 bits (422), Expect = 9e-049
Identities = 89/161 (55%), Positives = 104/161 (64%)
Frame = -1 / +2
Query: 811 YXXXXHPXAXSINIXXXXWKMYFDXXLPXXXXXXSDGNAGSSALXXXTCLQXXSRRIXYG 632
Y H A SINI W MYF LP DGN GS+AL CLQ S+RI +G
Sbjct: 485 YPQVLHRCAESININKKVWNMYFKHLLPRLVKPGDDGNCGSAALCDTMCLQILSKRIHFG 664
Query: 631 KFXXXAKFQESPEAYTPAIIAQDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNIGAK 452
KF AKF+E+P AY AI QDR QLM LLT TVE V+ RVE KA+IFGQ++ I
Sbjct: 665 KFVAEAKFRENPAAYETAIKEQDRTQLMQLLTYETVEEVVKKRVEIKARIFGQDITINDP 844
Query: 451 DKGSPPVYKIRPSLVAELYSYRIMPLTKEVEVAYLLRRLD* 329
+ + P YKI+PSLVA+LY RIMPLTKEV++ YLLRRLD*
Sbjct: 845 ETEADPSYKIQPSLVAKLYGERIMPLTKEVQIEYLLRRLD* 967
Score = 97.7 bits (207), Expect(2) = 4e-023
Identities = 52/112 (46%), Positives = 60/112 (53%)
Frame = +3 / -1
Query: 477 PKILALASTLCSTARSTVXYVRRFMS*SRSWAIMAGV*ASGDS*NLAXXXNFPXXILLXX 656
PKILAL STL T STV YVR +S RS +++A *A+G S NLA N P IL
Sbjct: 819 PKILALISTLFLTTSSTVSYVRSCISCVRSCSLIAVS*AAGFSRNLASATNLPK*ILFES 640
Query: 657 XCKQVXSQRALDPALPSLXXXXXXGRXXSKYIFQXXXXILIXSAXGCXXXXY 812
CK + SQRA +P LPS GR KYIF + I SA C Y
Sbjct: 639 ICKHIVSQRAAEPQLPSSPGLTSLGRRCLKYIFHTFLLMFIDSAQRCKTCGY 484
Score = 32.7 bits (65), Expect(2) = 4e-023
Identities = 18/27 (66%), Positives = 19/27 (70%)
Frame = +3 / -1
Query: 333 SSLLSKYATSTSLVSGMIL*LYSSATK 413
SSLLSKY+ TS V GMIL S ATK
Sbjct: 963 SSLLSKYSIWTSFVRGMILSP*SFATK 883
>ref|NM_105604.2| Arabidopsis thaliana CM3 (CHORISMATE MUTASE 3); chorismate mutase
AT1G69370 (CM3) mRNA, complete cds
Length = 1261
Score = 196 bits (422), Expect = 9e-049
Identities = 89/161 (55%), Positives = 104/161 (64%)
Frame = -1 / +2
Query: 811 YXXXXHPXAXSINIXXXXWKMYFDXXLPXXXXXXSDGNAGSSALXXXTCLQXXSRRIXYG 632
Y H A SINI W MYF LP DGN GS+AL CLQ S+RI +G
Sbjct: 611 YPQVLHRCAESININKKVWNMYFKHLLPRLVKPGDDGNCGSAALCDTMCLQILSKRIHFG 790
Query: 631 KFXXXAKFQESPEAYTPAIIAQDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNIGAK 452
KF AKF+E+P AY AI QDR QLM LLT TVE V+ RVE KA+IFGQ++ I
Sbjct: 791 KFVAEAKFRENPAAYETAIKEQDRTQLMQLLTYETVEEVVKKRVEIKARIFGQDITINDP 970
Query: 451 DKGSPPVYKIRPSLVAELYSYRIMPLTKEVEVAYLLRRLD* 329
+ + P YKI+PSLVA+LY RIMPLTKEV++ YLLRRLD*
Sbjct: 971 ETEADPSYKIQPSLVAKLYGERIMPLTKEVQIEYLLRRLD* 1093
Score = 97.7 bits (207), Expect(2) = 4e-023
Identities = 52/112 (46%), Positives = 60/112 (53%)
Frame = +3 / -2
Query: 477 PKILALASTLCSTARSTVXYVRRFMS*SRSWAIMAGV*ASGDS*NLAXXXNFPXXILLXX 656
PKILAL STL T STV YVR +S RS +++A *A+G S NLA N P IL
Sbjct: 945 PKILALISTLFLTTSSTVSYVRSCISCVRSCSLIAVS*AAGFSRNLASATNLPK*ILFES 766
Query: 657 XCKQVXSQRALDPALPSLXXXXXXGRXXSKYIFQXXXXILIXSAXGCXXXXY 812
CK + SQRA +P LPS GR KYIF + I SA C Y
Sbjct: 765 ICKHIVSQRAAEPQLPSSPGLTSLGRRCLKYIFHTFLLMFIDSAQRCKTCGY 610
Score = 32.7 bits (65), Expect(2) = 4e-023
Identities = 18/27 (66%), Positives = 19/27 (70%)
Frame = +3 / -2
Query: 333 SSLLSKYATSTSLVSGMIL*LYSSATK 413
SSLLSKY+ TS V GMIL S ATK
Sbjct: 1089 SSLLSKYSIWTSFVRGMILSP*SFATK 1009
>gb|AF131219.1|AF131219 Arabidopsis thaliana chorismate mutase 3 (CM3) mRNA, complete cds
Length = 1217
Score = 190 bits (410), Expect = 4e-047
Identities = 88/161 (54%), Positives = 102/161 (63%)
Frame = -1 / +2
Query: 811 YXXXXHPXAXSINIXXXXWKMYFDXXLPXXXXXXSDGNAGSSALXXXTCLQXXSRRIXYG 632
Y H A SINI W MYF LP DGN GS+AL CLQ S+RI
Sbjct: 611 YPQVLHRCAESININKKVWNMYFKHLLPRLVKPGDDGNCGSAALCDTMCLQILSKRIHLR 790
Query: 631 KFXXXAKFQESPEAYTPAIIAQDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNIGAK 452
KF AKF+E+P AY AI QDR QLM LLT TVE V+ RVE KA+IFGQ++ I
Sbjct: 791 KFVADAKFRENPAAYETAIKEQDRTQLMQLLTYETVEEVVKKRVEIKARIFGQDITINDP 970
Query: 451 DKGSPPVYKIRPSLVAELYSYRIMPLTKEVEVAYLLRRLD* 329
+ + P YKI+PSLVA+LY RIMPLTKEV++ YLLRRLD*
Sbjct: 971 ETEADPSYKIQPSLVAKLYGERIMPLTKEVQIEYLLRRLD* 1093
Score = 93.6 bits (198), Expect(2) = 7e-022
Identities = 51/112 (45%), Positives = 59/112 (52%)
Frame = +3 / -3
Query: 477 PKILALASTLCSTARSTVXYVRRFMS*SRSWAIMAGV*ASGDS*NLAXXXNFPXXILLXX 656
PKILAL STL T STV YVR +S RS +++A *A+G S NLA N IL
Sbjct: 945 PKILALISTLFLTTSSTVSYVRSCISCVRSCSLIAVS*AAGFSRNLASATNLRK*ILFES 766
Query: 657 XCKQVXSQRALDPALPSLXXXXXXGRXXSKYIFQXXXXILIXSAXGCXXXXY 812
CK + SQRA +P LPS GR KYIF + I SA C Y
Sbjct: 765 ICKHIVSQRAAEPQLPSSPGLTSLGRRCLKYIFHTFLLMFIDSAQRCKTCGY 610
Score = 32.7 bits (65), Expect(2) = 7e-022
Identities = 18/27 (66%), Positives = 19/27 (70%)
Frame = +3 / -3
Query: 333 SSLLSKYATSTSLVSGMIL*LYSSATK 413
SSLLSKY+ TS V GMIL S ATK
Sbjct: 1089 SSLLSKYSIWTSFVRGMILSP*SFATK 1009
>emb|AX464576.1| Sequence 4 from Patent WO0202798
Length = 1217
Score = 190 bits (410), Expect = 4e-047
Identities = 88/161 (54%), Positives = 102/161 (63%)
Frame = -1 / +2
Query: 811 YXXXXHPXAXSINIXXXXWKMYFDXXLPXXXXXXSDGNAGSSALXXXTCLQXXSRRIXYG 632
Y H A SINI W MYF LP DGN GS+AL CLQ S+RI
Sbjct: 611 YPQVLHRCAESININKKVWNMYFKHLLPRLVKPGDDGNCGSAALCDTMCLQILSKRIHLR 790
Query: 631 KFXXXAKFQESPEAYTPAIIAQDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNIGAK 452
KF AKF+E+P AY AI QDR QLM LLT TVE V+ RVE KA+IFGQ++ I
Sbjct: 791 KFVADAKFRENPAAYETAIKEQDRTQLMQLLTYETVEEVVKKRVEIKARIFGQDITINDP 970
Query: 451 DKGSPPVYKIRPSLVAELYSYRIMPLTKEVEVAYLLRRLD* 329
+ + P YKI+PSLVA+LY RIMPLTKEV++ YLLRRLD*
Sbjct: 971 ETEADPSYKIQPSLVAKLYGERIMPLTKEVQIEYLLRRLD* 1093
Score = 93.6 bits (198), Expect(2) = 7e-022
Identities = 51/112 (45%), Positives = 59/112 (52%)
Frame = +3 / -3
Query: 477 PKILALASTLCSTARSTVXYVRRFMS*SRSWAIMAGV*ASGDS*NLAXXXNFPXXILLXX 656
PKILAL STL T STV YVR +S RS +++A *A+G S NLA N IL
Sbjct: 945 PKILALISTLFLTTSSTVSYVRSCISCVRSCSLIAVS*AAGFSRNLASATNLRK*ILFES 766
Query: 657 XCKQVXSQRALDPALPSLXXXXXXGRXXSKYIFQXXXXILIXSAXGCXXXXY 812
CK + SQRA +P LPS GR KYIF + I SA C Y
Sbjct: 765 ICKHIVSQRAAEPQLPSSPGLTSLGRRCLKYIFHTFLLMFIDSAQRCKTCGY 610
Score = 32.7 bits (65), Expect(2) = 7e-022
Identities = 18/27 (66%), Positives = 19/27 (70%)
Frame = +3 / -3
Query: 333 SSLLSKYATSTSLVSGMIL*LYSSATK 413
SSLLSKY+ TS V GMIL S ATK
Sbjct: 1089 SSLLSKYSIWTSFVRGMILSP*SFATK 1009
>emb|AX464582.1| Sequence 10 from Patent WO0202798
Length = 1217
Score = 190 bits (410), Expect = 4e-047
Identities = 88/161 (54%), Positives = 102/161 (63%)
Frame = -1 / -2
Query: 811 YXXXXHPXAXSINIXXXXWKMYFDXXLPXXXXXXSDGNAGSSALXXXTCLQXXSRRIXYG 632
Y H A SINI W MYF LP DGN GS+AL CLQ S+RI
Sbjct: 607 YPQVLHRCAESININKKVWNMYFKHLLPRLVKPGDDGNCGSAALCDTMCLQILSKRIHLR 428
Query: 631 KFXXXAKFQESPEAYTPAIIAQDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNIGAK 452
KF AKF+E+P AY AI QDR QLM LLT TVE V+ RVE KA+IFGQ++ I
Sbjct: 427 KFVADAKFRENPAAYETAIKEQDRTQLMQLLTYETVEEVVKKRVEIKARIFGQDITINDP 248
Query: 451 DKGSPPVYKIRPSLVAELYSYRIMPLTKEVEVAYLLRRLD* 329
+ + P YKI+PSLVA+LY RIMPLTKEV++ YLLRRLD*
Sbjct: 247 ETEADPSYKIQPSLVAKLYGERIMPLTKEVQIEYLLRRLD* 125
Score = 93.6 bits (198), Expect(2) = 7e-022
Identities = 51/112 (45%), Positives = 59/112 (52%)
Frame = +3 / +3
Query: 477 PKILALASTLCSTARSTVXYVRRFMS*SRSWAIMAGV*ASGDS*NLAXXXNFPXXILLXX 656
PKILAL STL T STV YVR +S RS +++A *A+G S NLA N IL
Sbjct: 273 PKILALISTLFLTTSSTVSYVRSCISCVRSCSLIAVS*AAGFSRNLASATNLRK*ILFES 452
Query: 657 XCKQVXSQRALDPALPSLXXXXXXGRXXSKYIFQXXXXILIXSAXGCXXXXY 812
CK + SQRA +P LPS GR KYIF + I SA C Y
Sbjct: 453 ICKHIVSQRAAEPQLPSSPGLTSLGRRCLKYIFHTFLLMFIDSAQRCKTCGY 608
Score = 32.7 bits (65), Expect(2) = 7e-022
Identities = 18/27 (66%), Positives = 19/27 (70%)
Frame = +3 / +3
Query: 333 SSLLSKYATSTSLVSGMIL*LYSSATK 413
SSLLSKY+ TS V GMIL S ATK
Sbjct: 129 SSLLSKYSIWTSFVRGMILSP*SFATK 209
>gb|AV541889.1|AV541889 AV541889 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ172h08F 3', mRNA sequence
Length = 591
Score = 176 bits (379), Expect = 8e-043
Identities = 80/141 (56%), Positives = 95/141 (67%)
Frame = -1 / -1
Query: 751 MYFDXXLPXXXXXXSDGNAGSSALXXXTCLQXXSRRIXYGKFXXXAKFQESPEAYTPAII 572
MYF L DGN GS+AL CLQ S+RI +GKF AKF+E+P AY AI
Sbjct: 588 MYFKHLLXRLVKPGDDGNCGSAALCDTMCLQILSKRIHFGKFVAEAKFRENPAAYETAIK 409
Query: 571 AQDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNIGAKDKGSPPVYKIRPSLVAELYS 392
QDR QLM LLT TVE V+ RVE KA+IFGQ++ I + + P YKI+PSLVA+LY
Sbjct: 408 EQDRTQLMQLLTYETVEEVVKKRVEIKARIFGQDITINDPETEADPSYKIQPSLVAKLYG 229
Query: 391 YRIMPLTKEVEVAYLLRRLD* 329
RIMPLTKEV++ YLLRRLD*
Sbjct: 228 ERIMPLTKEVQIEYLLRRLD* 166
>emb|AX464574.1| Sequence 2 from Patent WO0202798
Length = 1207
Score = 138 bits (297), Expect(2) = 1e-042
Identities = 61/122 (50%), Positives = 76/122 (62%)
Frame = -1 / +1
Query: 811 YXXXXHPXAXSINIXXXXWKMYFDXXLPXXXXXXSDGNAGSSALXXXTCLQXXSRRIXYG 632
Y H A SINI W MYF +P DGN GS+A+ CLQ S+RI YG
Sbjct: 514 YPKVLHFAADSININKKIWNMYFRDLVPRLVKKGDDGNYGSTAVCDAICLQCLSKRIHYG 693
Query: 631 KFXXXAKFQESPEAYTPAIIAQDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNIGAK 452
KF AKFQ SPEAY AI AQD+D+LM++LT TVE A++ RVE K + +GQEV +G +
Sbjct: 694 KFVAEAKFQASPEAYESAIKAQDKDRLMDMLTFPTVEDAIKKRVEMKTRTYGQEVKVGME 873
Query: 451 DK 446
+K
Sbjct: 874 EK 879
Score = 86.8 bits (183), Expect(2) = 7e-022
Identities = 48/118 (40%), Positives = 59/118 (50%)
Frame = +3 / -3
Query: 459 PMFTSCPKILALASTLCSTARSTVXYVRRFMS*SRSWAIMAGV*ASGDS*NLAXXXNFPX 638
P FTSCP + STL A STV V +S S S A+MA ASG++*NLA N P
Sbjct: 866 PTFTSCPYVRVFISTLFFIASSTVGNVSISISRSLSCALMADSYASGEA*NLASATNLP* 687
Query: 639 XILLXXXCKQVXSQRALDPALPSLXXXXXXGRXXSKYIFQXXXXILIXSAXGCXXXXY 812
IL +Q+ SQ A++P LPS G KY+F + I SA C Y
Sbjct: 686 WILFERH*RQIASQTAVEP*LPSSPFFTSLGTRSLKYMFHIFLFMFIESAAKCNTFGY 513
Score = 57.4 bits (119), Expect(2) = 1e-042
Identities = 26/35 (74%), Positives = 28/35 (80%)
Frame = -1 / +1
Query: 433 VYKIRPSLVAELYSYRIMPLTKEVEVAYLLRRLD* 329
VYKI P LV +LY IMPLTKEV+V YLLRRLD*
Sbjct: 913 VYKISPILVGDLYGDWIMPLTKEVQVEYLLRRLD* 1017
Score = 39.6 bits (80), Expect(2) = 7e-022
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +3 / -3
Query: 303 AVLQLRKHTQSSLLSKYATSTSLVSGMIL*LYSSATK 413
A+L + QSSLLSKY+T TS V GMI Y S TK
Sbjct: 1043 AILFILLLPQSSLLSKYST*TSFVKGMIQSPYKSPTK 933
>emb|AX464580.1| Sequence 8 from Patent WO0202798
Length = 1207
Score = 138 bits (297), Expect(2) = 1e-042
Identities = 61/122 (50%), Positives = 76/122 (62%)
Frame = -1 / -1
Query: 811 YXXXXHPXAXSINIXXXXWKMYFDXXLPXXXXXXSDGNAGSSALXXXTCLQXXSRRIXYG 632
Y H A SINI W MYF +P DGN GS+A+ CLQ S+RI YG
Sbjct: 694 YPKVLHFAADSININKKIWNMYFRDLVPRLVKKGDDGNYGSTAVCDAICLQCLSKRIHYG 515
Query: 631 KFXXXAKFQESPEAYTPAIIAQDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNIGAK 452
KF AKFQ SPEAY AI AQD+D+LM++LT TVE A++ RVE K + +GQEV +G +
Sbjct: 514 KFVAEAKFQASPEAYESAIKAQDKDRLMDMLTFPTVEDAIKKRVEMKTRTYGQEVKVGME 335
Query: 451 DK 446
+K
Sbjct: 334 EK 329
Score = 86.8 bits (183), Expect(2) = 7e-022
Identities = 48/118 (40%), Positives = 59/118 (50%)
Frame = +3 / +3
Query: 459 PMFTSCPKILALASTLCSTARSTVXYVRRFMS*SRSWAIMAGV*ASGDS*NLAXXXNFPX 638
P FTSCP + STL A STV V +S S S A+MA ASG++*NLA N P
Sbjct: 342 PTFTSCPYVRVFISTLFFIASSTVGNVSISISRSLSCALMADSYASGEA*NLASATNLP* 521
Query: 639 XILLXXXCKQVXSQRALDPALPSLXXXXXXGRXXSKYIFQXXXXILIXSAXGCXXXXY 812
IL +Q+ SQ A++P LPS G KY+F + I SA C Y
Sbjct: 522 WILFERH*RQIASQTAVEP*LPSSPFFTSLGTRSLKYMFHIFLFMFIESAAKCNTFGY 695
Score = 57.4 bits (119), Expect(2) = 1e-042
Identities = 26/35 (74%), Positives = 28/35 (80%)
Frame = -1 / -1
Query: 433 VYKIRPSLVAELYSYRIMPLTKEVEVAYLLRRLD* 329
VYKI P LV +LY IMPLTKEV+V YLLRRLD*
Sbjct: 295 VYKISPILVGDLYGDWIMPLTKEVQVEYLLRRLD* 191
Score = 39.6 bits (80), Expect(2) = 7e-022
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +3 / +3
Query: 303 AVLQLRKHTQSSLLSKYATSTSLVSGMIL*LYSSATK 413
A+L + QSSLLSKY+T TS V GMI Y S TK
Sbjct: 165 AILFILLLPQSSLLSKYST*TSFVKGMIQSPYKSPTK 275
>emb|Z26519.1|ATCHMUT A.thaliana mRNA for chorismate mutase
Length = 1207
Score = 138 bits (297), Expect(2) = 1e-042
Identities = 61/122 (50%), Positives = 76/122 (62%)
Frame = -1 / +1
Query: 811 YXXXXHPXAXSINIXXXXWKMYFDXXLPXXXXXXSDGNAGSSALXXXTCLQXXSRRIXYG 632
Y H A SINI W MYF +P DGN GS+A+ CLQ S+RI YG
Sbjct: 514 YPKVLHFAADSININKKIWNMYFRDLVPRLVKKGDDGNYGSTAVCDAICLQCLSKRIHYG 693
Query: 631 KFXXXAKFQESPEAYTPAIIAQDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNIGAK 452
KF AKFQ SPEAY AI AQD+D+LM++LT TVE A++ RVE K + +GQEV +G +
Sbjct: 694 KFVAEAKFQASPEAYESAIKAQDKDRLMDMLTFPTVEDAIKKRVEMKTRTYGQEVKVGME 873
Query: 451 DK 446
+K
Sbjct: 874 EK 879
Score = 86.8 bits (183), Expect(2) = 7e-022
Identities = 48/118 (40%), Positives = 59/118 (50%)
Frame = +3 / -3
Query: 459 PMFTSCPKILALASTLCSTARSTVXYVRRFMS*SRSWAIMAGV*ASGDS*NLAXXXNFPX 638
P FTSCP + STL A STV V +S S S A+MA ASG++*NLA N P
Sbjct: 866 PTFTSCPYVRVFISTLFFIASSTVGNVSISISRSLSCALMADSYASGEA*NLASATNLP* 687
Query: 639 XILLXXXCKQVXSQRALDPALPSLXXXXXXGRXXSKYIFQXXXXILIXSAXGCXXXXY 812
IL +Q+ SQ A++P LPS G KY+F + I SA C Y
Sbjct: 686 WILFERH*RQIASQTAVEP*LPSSPFFTSLGTRSLKYMFHIFLFMFIESAAKCNTFGY 513
Score = 57.4 bits (119), Expect(2) = 1e-042
Identities = 26/35 (74%), Positives = 28/35 (80%)
Frame = -1 / +1
Query: 433 VYKIRPSLVAELYSYRIMPLTKEVEVAYLLRRLD* 329
VYKI P LV +LY IMPLTKEV+V YLLRRLD*
Sbjct: 913 VYKISPILVGDLYGDWIMPLTKEVQVEYLLRRLD* 1017
Score = 39.6 bits (80), Expect(2) = 7e-022
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +3 / -3
Query: 303 AVLQLRKHTQSSLLSKYATSTSLVSGMIL*LYSSATK 413
A+L + QSSLLSKY+T TS V GMI Y S TK
Sbjct: 1043 AILFILLLPQSSLLSKYST*TSFVKGMIQSPYKSPTK 933
>ref|NM_113844.3| Arabidopsis thaliana CM1; chorismate mutase AT3G29200 (CM1) mRNA,
complete cds
Length = 1370
Score = 138 bits (295), Expect(2) = 2e-042
Identities = 61/122 (50%), Positives = 75/122 (61%)
Frame = -1 / +3
Query: 811 YXXXXHPXAXSINIXXXXWKMYFDXXLPXXXXXXSDGNAGSSALXXXTCLQXXSRRIXYG 632
Y H A SINI W MYF +P DGN GS+A+ CLQ S+RI YG
Sbjct: 678 YPKVLHFAADSININKKIWNMYFRDLVPRLVKKGDDGNYGSTAVCDAICLQCLSKRIHYG 857
Query: 631 KFXXXAKFQESPEAYTPAIIAQDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNIGAK 452
KF AKFQ SPEAY AI AQD+D LM++LT TVE A++ RVE K + +GQEV +G +
Sbjct: 858 KFVAEAKFQASPEAYESAIKAQDKDALMDMLTFPTVEDAIKKRVEMKTRTYGQEVKVGME 1037
Query: 451 DK 446
+K
Sbjct: 1038 EK 1043
Score = 86.8 bits (183), Expect(2) = 7e-022
Identities = 48/118 (40%), Positives = 59/118 (50%)
Frame = +3 / -2
Query: 459 PMFTSCPKILALASTLCSTARSTVXYVRRFMS*SRSWAIMAGV*ASGDS*NLAXXXNFPX 638
P FTSCP + STL A STV V +S S S A+MA ASG++*NLA N P
Sbjct: 1030 PTFTSCPYVRVFISTLFFIASSTVGNVSISISASLSCALMADSYASGEA*NLASATNLP* 851
Query: 639 XILLXXXCKQVXSQRALDPALPSLXXXXXXGRXXSKYIFQXXXXILIXSAXGCXXXXY 812
IL +Q+ SQ A++P LPS G KY+F + I SA C Y
Sbjct: 850 WILFERH*RQIASQTAVEP*LPSSPFFTSLGTRSLKYMFHIFLFMFIESAAKCNTFGY 677
Score = 57.4 bits (119), Expect(2) = 2e-042
Identities = 26/35 (74%), Positives = 28/35 (80%)
Frame = -1 / +3
Query: 433 VYKIRPSLVAELYSYRIMPLTKEVEVAYLLRRLD* 329
VYKI P LV +LY IMPLTKEV+V YLLRRLD*
Sbjct: 1077 VYKISPILVGDLYGDWIMPLTKEVQVEYLLRRLD* 1181
Score = 39.6 bits (80), Expect(2) = 7e-022
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +3 / -2
Query: 303 AVLQLRKHTQSSLLSKYATSTSLVSGMIL*LYSSATK 413
A+L + QSSLLSKY+T TS V GMI Y S TK
Sbjct: 1207 AILFILLLPQSSLLSKYST*TSFVKGMIQSPYKSPTK 1097
>emb|AX506042.1| Sequence 737 from Patent WO0216655
Length = 1005
Score = 138 bits (295), Expect(2) = 2e-042
Identities = 61/122 (50%), Positives = 75/122 (61%)
Frame = -1 / +1
Query: 811 YXXXXHPXAXSINIXXXXWKMYFDXXLPXXXXXXSDGNAGSSALXXXTCLQXXSRRIXYG 632
Y H A SINI W MYF +P DGN GS+A+ CLQ S+RI YG
Sbjct: 502 YPKVLHFAADSININKKIWNMYFRDLVPRLVKKGDDGNYGSTAVCDAICLQCLSKRIHYG 681
Query: 631 KFXXXAKFQESPEAYTPAIIAQDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNIGAK 452
KF AKFQ SPEAY AI AQD+D LM++LT TVE A++ RVE K + +GQEV +G +
Sbjct: 682 KFVAEAKFQASPEAYESAIKAQDKDALMDMLTFPTVEDAIKKRVEMKTRTYGQEVKVGME 861
Query: 451 DK 446
+K
Sbjct: 862 EK 867
Score = 86.8 bits (183), Expect(2) = 1e-021
Identities = 48/118 (40%), Positives = 59/118 (50%)
Frame = +3 / -2
Query: 459 PMFTSCPKILALASTLCSTARSTVXYVRRFMS*SRSWAIMAGV*ASGDS*NLAXXXNFPX 638
P FTSCP + STL A STV V +S S S A+MA ASG++*NLA N P
Sbjct: 854 PTFTSCPYVRVFISTLFFIASSTVGNVSISISASLSCALMADSYASGEA*NLASATNLP* 675
Query: 639 XILLXXXCKQVXSQRALDPALPSLXXXXXXGRXXSKYIFQXXXXILIXSAXGCXXXXY 812
IL +Q+ SQ A++P LPS G KY+F + I SA C Y
Sbjct: 674 WILFERH*RQIASQTAVEP*LPSSPFFTSLGTRSLKYMFHIFLFMFIESAAKCNTFGY 501
Score = 57.4 bits (119), Expect(2) = 2e-042
Identities = 26/35 (74%), Positives = 28/35 (80%)
Frame = -1 / +1
Query: 433 VYKIRPSLVAELYSYRIMPLTKEVEVAYLLRRLD* 329
VYKI P LV +LY IMPLTKEV+V YLLRRLD*
Sbjct: 901 VYKISPILVGDLYGDWIMPLTKEVQVEYLLRRLD* 1005
Score = 38.6 bits (78), Expect(2) = 1e-021
Identities = 19/28 (67%), Positives = 20/28 (71%)
Frame = +3 / -2
Query: 330 QSSLLSKYATSTSLVSGMIL*LYSSATK 413
QSSLLSKY+T TS V GMI Y S TK
Sbjct: 1004 QSSLLSKYST*TSFVKGMIQSPYKSPTK 921
>emb|BX822129.1|CNS0A727 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB15ZB12 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1329
Score = 136 bits (292), Expect(2) = 5e-042
Identities = 60/122 (49%), Positives = 75/122 (61%)
Frame = -1 / +3
Query: 811 YXXXXHPXAXSINIXXXXWKMYFDXXLPXXXXXXSDGNAGSSALXXXTCLQXXSRRIXYG 632
Y H A SINI W MYF +P DGN GS+A+ CL+ S+RI YG
Sbjct: 678 YPKVLHFAADSININKKIWNMYFRDLVPRLVKKGDDGNYGSTAVCDAICLECLSKRIHYG 857
Query: 631 KFXXXAKFQESPEAYTPAIIAQDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNIGAK 452
KF AKFQ SPEAY AI AQD+D LM++LT TVE A++ RVE K + +GQEV +G +
Sbjct: 858 KFVAEAKFQASPEAYESAIKAQDKDALMDMLTFPTVEDAIKKRVEMKTRTYGQEVKVGME 1037
Query: 451 DK 446
+K
Sbjct: 1038 EK 1043
Score = 85.8 bits (181), Expect(2) = 1e-021
Identities = 47/118 (39%), Positives = 58/118 (49%)
Frame = +3 / -3
Query: 459 PMFTSCPKILALASTLCSTARSTVXYVRRFMS*SRSWAIMAGV*ASGDS*NLAXXXNFPX 638
P FTSCP + STL A STV V +S S S A+MA ASG++*NLA N P
Sbjct: 1030 PTFTSCPYVRVFISTLFFIASSTVGNVSISISASLSCALMADSYASGEA*NLASATNLP* 851
Query: 639 XILLXXXCKQVXSQRALDPALPSLXXXXXXGRXXSKYIFQXXXXILIXSAXGCXXXXY 812
IL +Q+ S A++P LPS G KY+F + I SA C Y
Sbjct: 850 WILFERHSRQIASHTAVEP*LPSSPFFTSLGTRSLKYMFHIFLFMFIESAAKCNTFGY 677
Score = 57.4 bits (119), Expect(2) = 5e-042
Identities = 26/35 (74%), Positives = 28/35 (80%)
Frame = -1 / +3
Query: 433 VYKIRPSLVAELYSYRIMPLTKEVEVAYLLRRLD* 329
VYKI P LV +LY IMPLTKEV+V YLLRRLD*
Sbjct: 1077 VYKISPILVGDLYGDWIMPLTKEVQVEYLLRRLD* 1181
Score = 39.6 bits (80), Expect(2) = 1e-021
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +3 / -3
Query: 303 AVLQLRKHTQSSLLSKYATSTSLVSGMIL*LYSSATK 413
A+L + QSSLLSKY+T TS V GMI Y S TK
Sbjct: 1207 AILFILLLPQSSLLSKYST*TSFVKGMIQSPYKSPTK 1097
>emb|BX824460.1|CNS0A6WL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH4ZG08 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1265
Score = 135 bits (289), Expect(2) = 1e-041
Identities = 60/122 (49%), Positives = 74/122 (60%)
Frame = -1 / +1
Query: 811 YXXXXHPXAXSINIXXXXWKMYFDXXLPXXXXXXSDGNAGSSALXXXTCLQXXSRRIXYG 632
Y H A SINI W MYF +P DGN GS+A+ CLQ S+RI YG
Sbjct: 571 YPKVLHFAADSININKKIWNMYFRDLVPRLVKKGDDGNYGSTAVCDAICLQCLSKRIHYG 750
Query: 631 KFXXXAKFQESPEAYTPAIIAQDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNIGAK 452
KF AKFQ SPEAY AI AQD+D LM++L TVE A++ RVE K + +GQEV +G +
Sbjct: 751 KFVAEAKFQASPEAYESAIKAQDKDALMDMLKFPTVEDAIKKRVEMKTRTYGQEVKVGME 930
Query: 451 DK 446
+K
Sbjct: 931 EK 936
Score = 57.4 bits (119), Expect(2) = 1e-041
Identities = 26/35 (74%), Positives = 28/35 (80%)
Frame = -1 / +1
Query: 433 VYKIRPSLVAELYSYRIMPLTKEVEVAYLLRRLD* 329
VYKI P LV +LY IMPLTKEV+V YLLRRLD*
Sbjct: 970 VYKISPILVGDLYGDWIMPLTKEVQVEYLLRRLD* 1074
>gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom arm complete sequence
Length = 14668883
Score = 116 bits (247), Expect(3) = 4e-041
Identities = 51/80 (63%), Positives = 61/80 (76%)
Frame = -1 / +3
Query: 568 QDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNIGAKDKGSPPVYKIRPSLVAELYSY 389
QDR QLM LLT TVE V+ RVE KA+IFGQ++ I + + P YKI+PSLVA+LY
Sbjct: 10323516 QDRTQLMQLLTYETVEEVVKKRVEIKARIFGQDITINDPETEADPSYKIQPSLVAKLYGE 10323695
Query: 388 RIMPLTKEVEVAYLLRRLD* 329
RIMPLTKEV++ YLLRRLD*
Sbjct: 10323696 RIMPLTKEVQIEYLLRRLD* 10323755
Score = 51.0 bits (105), Expect(3) = 4e-041
Identities = 23/49 (46%), Positives = 24/49 (48%)
Frame = -1 / +1
Query: 796 HPXAXSINIXXXXWKMYFDXXLPXXXXXXSDGNAGSSALXXXTCLQXXS 650
H A SINI W MYF LP DGN GS+AL CLQ S
Sbjct: 10323115 HRCAESININKKVWNMYFKHLLPRLVKPGDDGNCGSAALCDTMCLQARS 10323261
Score = 41.8 bits (85), Expect(3) = 4e-041
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = -1 / +1
Query: 664 LQXXSRRIXYGKFXXXAKFQESPEAYTPAIIAQ 566
LQ S+RI +GKF AKF+E+P AY AI Q
Sbjct: 10323331 LQILSKRIHFGKFVAEAKFRENPAAYETAIKEQ 10323429
>gb|AC073178.9|AC073178 Arabidopsis thaliana chromosome 1 BAC F10D13 genomic sequence, complete
sequence
Length = 107214
Score = 116 bits (247), Expect(3) = 4e-041
Identities = 51/80 (63%), Positives = 61/80 (76%)
Frame = -1 / +2
Query: 568 QDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNIGAKDKGSPPVYKIRPSLVAELYSY 389
QDR QLM LLT TVE V+ RVE KA+IFGQ++ I + + P YKI+PSLVA+LY
Sbjct: 24641 QDRTQLMQLLTYETVEEVVKKRVEIKARIFGQDITINDPETEADPSYKIQPSLVAKLYGE 24820
Query: 388 RIMPLTKEVEVAYLLRRLD* 329
RIMPLTKEV++ YLLRRLD*
Sbjct: 24821 RIMPLTKEVQIEYLLRRLD* 24880
Score = 51.0 bits (105), Expect(3) = 4e-041
Identities = 23/49 (46%), Positives = 24/49 (48%)
Frame = -1 / +3
Query: 796 HPXAXSINIXXXXWKMYFDXXLPXXXXXXSDGNAGSSALXXXTCLQXXS 650
H A SINI W MYF LP DGN GS+AL CLQ S
Sbjct: 24240 HRCAESININKKVWNMYFKHLLPRLVKPGDDGNCGSAALCDTMCLQARS 24386
Score = 41.8 bits (85), Expect(3) = 4e-041
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = -1 / +3
Query: 664 LQXXSRRIXYGKFXXXAKFQESPEAYTPAIIAQ 566
LQ S+RI +GKF AKF+E+P AY AI Q
Sbjct: 24456 LQILSKRIHFGKFVAEAKFRENPAAYETAIKEQ 24554
>gb|AC018364.5|AC018364 Arabidopsis thaliana chromosome 1 BAC F23O10 genomic sequence, complete
sequence
Length = 93802
Score = 116 bits (247), Expect(3) = 4e-041
Identities = 51/80 (63%), Positives = 61/80 (76%)
Frame = -1 / -2
Query: 568 QDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNIGAKDKGSPPVYKIRPSLVAELYSY 389
QDR QLM LLT TVE V+ RVE KA+IFGQ++ I + + P YKI+PSLVA+LY
Sbjct: 15588 QDRTQLMQLLTYETVEEVVKKRVEIKARIFGQDITINDPETEADPSYKIQPSLVAKLYGE 15409
Query: 388 RIMPLTKEVEVAYLLRRLD* 329
RIMPLTKEV++ YLLRRLD*
Sbjct: 15408 RIMPLTKEVQIEYLLRRLD* 15349
Score = 51.0 bits (105), Expect(3) = 4e-041
Identities = 23/49 (46%), Positives = 24/49 (48%)
Frame = -1 / -3
Query: 796 HPXAXSINIXXXXWKMYFDXXLPXXXXXXSDGNAGSSALXXXTCLQXXS 650
H A SINI W MYF LP DGN GS+AL CLQ S
Sbjct: 15989 HRCAESININKKVWNMYFKHLLPRLVKPGDDGNCGSAALCDTMCLQARS 15843
Score = 41.8 bits (85), Expect(3) = 4e-041
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = -1 / -3
Query: 664 LQXXSRRIXYGKFXXXAKFQESPEAYTPAIIAQ 566
LQ S+RI +GKF AKF+E+P AY AI Q
Sbjct: 15773 LQILSKRIHFGKFVAEAKFRENPAAYETAIKEQ 15675
>gb|AY089156.1| Arabidopsis thaliana clone 39613 mRNA, complete sequence
Length = 1274
Score = 138 bits (295), Expect(2) = 2e-038
Identities = 61/122 (50%), Positives = 75/122 (61%)
Frame = -1 / +3
Query: 811 YXXXXHPXAXSINIXXXXWKMYFDXXLPXXXXXXSDGNAGSSALXXXTCLQXXSRRIXYG 632
Y H A SINI W MYF +P DGN GS+A+ CLQ S+RI YG
Sbjct: 588 YPKVLHFAADSININKKIWNMYFRDLVPRLVKKGDDGNYGSTAVCDAICLQCLSKRIHYG 767
Query: 631 KFXXXAKFQESPEAYTPAIIAQDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNIGAK 452
KF AKFQ SPEAY AI AQD+D LM++LT TVE A++ RVE K + +GQEV +G +
Sbjct: 768 KFVAEAKFQASPEAYESAIKAQDKDALMDMLTFPTVEDAIKKRVEMKTRTYGQEVKVGME 947
Query: 451 DK 446
+K
Sbjct: 948 EK 953
Score = 43.7 bits (89), Expect(2) = 2e-038
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = -1 / +2
Query: 412 LVAELYSYRIMPLTKEVEVAYLLRRLD* 329
L +LY IMPLTKEV+V YLLRRLD*
Sbjct: 1007 LSCDLYGDWIMPLTKEVQVEYLLRRLD* 1090
>gb|AY065238.1| Arabidopsis thaliana putative chorismate mutase CM2 (At5g10870)
mRNA, complete cds
Length = 1055
Score = 127 bits (273), Expect(2) = 1e-036
Identities = 56/119 (47%), Positives = 68/119 (57%)
Frame = -1 / +3
Query: 811 YXXXXHPXAXSINIXXXXWKMYFDXXLPXXXXXXSDGNAGSSALXXXTCLQXXSRRIXYG 632
Y HP A S+NI W +YF LP DGN S+A CLQ SRRI YG
Sbjct: 411 YPSALHPKALSVNINKQIWDIYFKELLPLFVKPGDDGNYPSTAASDLACLQALSRRIHYG 590
Query: 631 KFXXXAKFQESPEAYTPAIIAQDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNIGA 455
KF KF+++P+ Y PAI AQDR+ LM LLT VE V+ RV+ KA+ FGQEV +
Sbjct: 591 KFVAEVKFRDAPQDYEPAIRAQDREALMKLLTFEKVEEMVKKRVQKKAETFGQEVKFNS 767
Score = 48.3 bits (99), Expect(2) = 1e-036
Identities = 20/35 (57%), Positives = 26/35 (74%)
Frame = -1 / +3
Query: 430 YKIRPSLVAELYSYRIMPLTKEVEVAYLLRRLD*V 326
YK+ P L + +Y ++PLTK VEV YLLRRLD*+
Sbjct: 795 YKVDPLLASRIYGEWLIPLTKLVEVEYLLRRLD*I 899
>ref|NM_121125.2| Arabidopsis thaliana ATCM2; chorismate mutase AT5G10870 (ATCM2)
mRNA, complete cds
Length = 1041
Score = 127 bits (273), Expect(2) = 1e-036
Identities = 56/119 (47%), Positives = 68/119 (57%)
Frame = -1 / +3
Query: 811 YXXXXHPXAXSINIXXXXWKMYFDXXLPXXXXXXSDGNAGSSALXXXTCLQXXSRRIXYG 632
Y HP A S+NI W +YF LP DGN S+A CLQ SRRI YG
Sbjct: 411 YPSALHPKALSVNINKQIWDIYFKELLPLFVKPGDDGNYPSTAASDLACLQALSRRIHYG 590
Query: 631 KFXXXAKFQESPEAYTPAIIAQDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNIGA 455
KF KF+++P+ Y PAI AQDR+ LM LLT VE V+ RV+ KA+ FGQEV +
Sbjct: 591 KFVAEVKFRDAPQDYEPAIRAQDREALMKLLTFEKVEEMVKKRVQKKAETFGQEVKFNS 767
Score = 48.3 bits (99), Expect(2) = 1e-036
Identities = 20/35 (57%), Positives = 26/35 (74%)
Frame = -1 / +3
Query: 430 YKIRPSLVAELYSYRIMPLTKEVEVAYLLRRLD*V 326
YK+ P L + +Y ++PLTK VEV YLLRRLD*+
Sbjct: 795 YKVDPLLASRIYGEWLIPLTKLVEVEYLLRRLD*I 899
>emb|AX343933.1| Sequence 3 from Patent WO0200901
Length = 1006
Score = 127 bits (273), Expect(2) = 1e-036
Identities = 56/119 (47%), Positives = 68/119 (57%)
Frame = -1 / +1
Query: 811 YXXXXHPXAXSINIXXXXWKMYFDXXLPXXXXXXSDGNAGSSALXXXTCLQXXSRRIXYG 632
Y HP A S+NI W +YF LP DGN S+A CLQ SRRI YG
Sbjct: 376 YPSALHPKALSVNINKQIWDIYFKELLPLFVKPGDDGNYPSTAASDLACLQALSRRIHYG 555
Query: 631 KFXXXAKFQESPEAYTPAIIAQDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNIGA 455
KF KF+++P+ Y PAI AQDR+ LM LLT VE V+ RV+ KA+ FGQEV +
Sbjct: 556 KFVAEVKFRDAPQDYEPAIRAQDREALMKLLTFEKVEEMVKKRVQKKAETFGQEVKFNS 732
Score = 48.3 bits (99), Expect(2) = 1e-036
Identities = 20/35 (57%), Positives = 26/35 (74%)
Frame = -1 / +1
Query: 430 YKIRPSLVAELYSYRIMPLTKEVEVAYLLRRLD*V 326
YK+ P L + +Y ++PLTK VEV YLLRRLD*+
Sbjct: 760 YKVDPLLASRIYGEWLIPLTKLVEVEYLLRRLD*I 864
>emb|AX464575.1| Sequence 3 from Patent WO0202798
Length = 1006
Score = 127 bits (273), Expect(2) = 1e-036
Identities = 56/119 (47%), Positives = 68/119 (57%)
Frame = -1 / +1
Query: 811 YXXXXHPXAXSINIXXXXWKMYFDXXLPXXXXXXSDGNAGSSALXXXTCLQXXSRRIXYG 632
Y HP A S+NI W +YF LP DGN S+A CLQ SRRI YG
Sbjct: 376 YPSALHPKALSVNINKQIWDIYFKELLPLFVKPGDDGNYPSTAASDLACLQALSRRIHYG 555
Query: 631 KFXXXAKFQESPEAYTPAIIAQDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNIGA 455
KF KF+++P+ Y PAI AQDR+ LM LLT VE V+ RV+ KA+ FGQEV +
Sbjct: 556 KFVAEVKFRDAPQDYEPAIRAQDREALMKLLTFEKVEEMVKKRVQKKAETFGQEVKFNS 732
Score = 48.3 bits (99), Expect(2) = 1e-036
Identities = 20/35 (57%), Positives = 26/35 (74%)
Frame = -1 / +1
Query: 430 YKIRPSLVAELYSYRIMPLTKEVEVAYLLRRLD*V 326
YK+ P L + +Y ++PLTK VEV YLLRRLD*+
Sbjct: 760 YKVDPLLASRIYGEWLIPLTKLVEVEYLLRRLD*I 864
>emb|AX464581.1| Sequence 9 from Patent WO0202798
Length = 1006
Score = 127 bits (273), Expect(2) = 1e-036
Identities = 56/119 (47%), Positives = 68/119 (57%)
Frame = -1 / -1
Query: 811 YXXXXHPXAXSINIXXXXWKMYFDXXLPXXXXXXSDGNAGSSALXXXTCLQXXSRRIXYG 632
Y HP A S+NI W +YF LP DGN S+A CLQ SRRI YG
Sbjct: 631 YPSALHPKALSVNINKQIWDIYFKELLPLFVKPGDDGNYPSTAASDLACLQALSRRIHYG 452
Query: 631 KFXXXAKFQESPEAYTPAIIAQDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNIGA 455
KF KF+++P+ Y PAI AQDR+ LM LLT VE V+ RV+ KA+ FGQEV +
Sbjct: 451 KFVAEVKFRDAPQDYEPAIRAQDREALMKLLTFEKVEEMVKKRVQKKAETFGQEVKFNS 275
Score = 48.3 bits (99), Expect(2) = 1e-036
Identities = 20/35 (57%), Positives = 26/35 (74%)
Frame = -1 / -1
Query: 430 YKIRPSLVAELYSYRIMPLTKEVEVAYLLRRLD*V 326
YK+ P L + +Y ++PLTK VEV YLLRRLD*+
Sbjct: 247 YKVDPLLASRIYGEWLIPLTKLVEVEYLLRRLD*I 143
>gb|L47355.1| Arabidopsis thaliana chorismate mutase mRNA, complete cds
Length = 1006
Score = 127 bits (273), Expect(2) = 1e-036
Identities = 56/119 (47%), Positives = 68/119 (57%)
Frame = -1 / +1
Query: 811 YXXXXHPXAXSINIXXXXWKMYFDXXLPXXXXXXSDGNAGSSALXXXTCLQXXSRRIXYG 632
Y HP A S+NI W +YF LP DGN S+A CLQ SRRI YG
Sbjct: 376 YPSALHPKALSVNINKQIWDIYFKELLPLFVKPGDDGNYPSTAASDLACLQALSRRIHYG 555
Query: 631 KFXXXAKFQESPEAYTPAIIAQDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNIGA 455
KF KF+++P+ Y PAI AQDR+ LM LLT VE V+ RV+ KA+ FGQEV +
Sbjct: 556 KFVAEVKFRDAPQDYEPAIRAQDREALMKLLTFEKVEEMVKKRVQKKAETFGQEVKFNS 732
Score = 48.3 bits (99), Expect(2) = 1e-036
Identities = 20/35 (57%), Positives = 26/35 (74%)
Frame = -1 / +1
Query: 430 YKIRPSLVAELYSYRIMPLTKEVEVAYLLRRLD*V 326
YK+ P L + +Y ++PLTK VEV YLLRRLD*+
Sbjct: 760 YKVDPLLASRIYGEWLIPLTKLVEVEYLLRRLD*I 864
>gb|AY133840.1| Arabidopsis thaliana clone U18739 putative chorismate mutase CM2
(At5g10870) mRNA, complete cds
Length = 829
Score = 127 bits (273), Expect(2) = 1e-036
Identities = 56/119 (47%), Positives = 68/119 (57%)
Frame = -1 / +1
Query: 811 YXXXXHPXAXSINIXXXXWKMYFDXXLPXXXXXXSDGNAGSSALXXXTCLQXXSRRIXYG 632
Y HP A S+NI W +YF LP DGN S+A CLQ SRRI YG
Sbjct: 313 YPSALHPKALSVNINKQIWDIYFKELLPLFVKPGDDGNYPSTAASDLACLQALSRRIHYG 492
Query: 631 KFXXXAKFQESPEAYTPAIIAQDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNIGA 455
KF KF+++P+ Y PAI AQDR+ LM LLT VE V+ RV+ KA+ FGQEV +
Sbjct: 493 KFVAEVKFRDAPQDYEPAIRAQDREALMKLLTFEKVEEMVKKRVQKKAETFGQEVKFNS 669
Score = 48.3 bits (99), Expect(2) = 1e-036
Identities = 20/35 (57%), Positives = 26/35 (74%)
Frame = -1 / +1
Query: 430 YKIRPSLVAELYSYRIMPLTKEVEVAYLLRRLD*V 326
YK+ P L + +Y ++PLTK VEV YLLRRLD*+
Sbjct: 697 YKVDPLLASRIYGEWLIPLTKLVEVEYLLRRLD*I 801
>emb|AX506277.1| Sequence 972 from Patent WO0216655
Length = 798
Score = 127 bits (273), Expect(2) = 3e-036
Identities = 56/119 (47%), Positives = 68/119 (57%)
Frame = -1 / +1
Query: 811 YXXXXHPXAXSINIXXXXWKMYFDXXLPXXXXXXSDGNAGSSALXXXTCLQXXSRRIXYG 632
Y HP A S+NI W +YF LP DGN S+A CLQ SRRI YG
Sbjct: 313 YPSALHPKALSVNINKQIWDIYFKELLPLFVKPGDDGNYPSTAASDLACLQALSRRIHYG 492
Query: 631 KFXXXAKFQESPEAYTPAIIAQDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNIGA 455
KF KF+++P+ Y PAI AQDR+ LM LLT VE V+ RV+ KA+ FGQEV +
Sbjct: 493 KFVAEVKFRDAPQDYEPAIRAQDREALMKLLTFEKVEEMVKKRVQKKAETFGQEVKFNS 669
Score = 46.9 bits (96), Expect(2) = 3e-036
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = -1 / +1
Query: 430 YKIRPSLVAELYSYRIMPLTKEVEVAYLLRRLD* 329
YK+ P L + +Y ++PLTK VEV YLLRRLD*
Sbjct: 697 YKVDPLLASRIYGEWLIPLTKLVEVEYLLRRLD* 798
>dbj|AB026657.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MXO21
Length = 77401
Score = 57.4 bits (119), Expect(4) = 2e-035
Identities = 26/35 (74%), Positives = 28/35 (80%)
Frame = -1 / -1
Query: 433 VYKIRPSLVAELYSYRIMPLTKEVEVAYLLRRLD* 329
VYKI P LV +LY IMPLTKEV+V YLLRRLD*
Sbjct: 10333 VYKISPILVGDLYGDWIMPLTKEVQVEYLLRRLD* 10229
Score = 54.7 bits (113), Expect(4) = 2e-035
Identities = 21/41 (51%), Positives = 31/41 (75%)
Frame = -1 / -1
Query: 568 QDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNIGAKDK 446
QD+D LM++LT TVE A++ RVE K + +GQEV +G ++K
Sbjct: 10489 QDKDALMDMLTFPTVEDAIKKRVEMKTRTYGQEVKVGMEEK 10367
Score = 48.7 bits (100), Expect(4) = 2e-035
Identities = 22/33 (66%), Positives = 23/33 (69%)
Frame = -1 / -3
Query: 664 LQXXSRRIXYGKFXXXAKFQESPEAYTPAIIAQ 566
LQ S+RI YGKF AKFQ SPEAY AI AQ
Sbjct: 10679 LQCLSKRIHYGKFVAEAKFQASPEAYESAIKAQ 10581
Score = 46.4 bits (95), Expect(4) = 2e-035
Identities = 21/49 (42%), Positives = 24/49 (48%)
Frame = -1 / -3
Query: 796 HPXAXSINIXXXXWKMYFDXXLPXXXXXXSDGNAGSSALXXXTCLQXXS 650
H A SINI W MYF +P DGN GS+A+ CLQ S
Sbjct: 10931 HFAADSININKKIWNMYFRDLVPRLVKKGDDGNYGSTAVCDAICLQVCS 10785
>emb|AX464577.1| Sequence 5 from Patent WO0202798
Length = 5099
Score = 57.4 bits (119), Expect(4) = 2e-034
Identities = 26/35 (74%), Positives = 28/35 (80%)
Frame = -1 / +3
Query: 433 VYKIRPSLVAELYSYRIMPLTKEVEVAYLLRRLD* 329
VYKI P LV +LY IMPLTKEV+V YLLRRLD*
Sbjct: 4545 VYKISPILVGDLYGDWIMPLTKEVQVEYLLRRLD* 4649
Score = 54.7 bits (113), Expect(4) = 2e-034
Identities = 21/41 (51%), Positives = 31/41 (75%)
Frame = -1 / +3
Query: 568 QDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNIGAKDK 446
QD+D LM++LT TVE A++ RVE K + +GQEV +G ++K
Sbjct: 4389 QDKDALMDMLTFPTVEDAIKKRVEMKTRTYGQEVKVGMEEK 4511
Score = 48.7 bits (100), Expect(4) = 2e-034
Identities = 22/33 (66%), Positives = 23/33 (69%)
Frame = -1 / +2
Query: 664 LQXXSRRIXYGKFXXXAKFQESPEAYTPAIIAQ 566
LQ S+RI YGKF AKFQ SPEAY AI AQ
Sbjct: 4199 LQCLSKRIHYGKFVAEAKFQASPEAYESAIKAQ 4297
Score = 43.2 bits (88), Expect(4) = 2e-034
Identities = 20/49 (40%), Positives = 23/49 (46%)
Frame = -1 / +2
Query: 796 HPXAXSINIXXXXWKMYFDXXLPXXXXXXSDGNAGSSALXXXTCLQXXS 650
H A SINI W MYF +P DGN S+A+ CLQ S
Sbjct: 3947 HFAADSININKKIWNMYFRDLVPRLVKKGDDGNYXSTAVCDAICLQVCS 4093
>emb|AJ242647.1|ATH242647 Arabidopsis thaliana CM1 gene for plastidic chorismate mutase, exons
1-6
Length = 5099
Score = 57.4 bits (119), Expect(4) = 2e-034
Identities = 26/35 (74%), Positives = 28/35 (80%)
Frame = -1 / +3
Query: 433 VYKIRPSLVAELYSYRIMPLTKEVEVAYLLRRLD* 329
VYKI P LV +LY IMPLTKEV+V YLLRRLD*
Sbjct: 4545 VYKISPILVGDLYGDWIMPLTKEVQVEYLLRRLD* 4649
Score = 54.7 bits (113), Expect(4) = 2e-034
Identities = 21/41 (51%), Positives = 31/41 (75%)
Frame = -1 / +3
Query: 568 QDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNIGAKDK 446
QD+D LM++LT TVE A++ RVE K + +GQEV +G ++K
Sbjct: 4389 QDKDALMDMLTFPTVEDAIKKRVEMKTRTYGQEVKVGMEEK 4511
Score = 48.7 bits (100), Expect(4) = 2e-034
Identities = 22/33 (66%), Positives = 23/33 (69%)
Frame = -1 / +2
Query: 664 LQXXSRRIXYGKFXXXAKFQESPEAYTPAIIAQ 566
LQ S+RI YGKF AKFQ SPEAY AI AQ
Sbjct: 4199 LQCLSKRIHYGKFVAEAKFQASPEAYESAIKAQ 4297
Score = 43.2 bits (88), Expect(4) = 2e-034
Identities = 20/49 (40%), Positives = 23/49 (46%)
Frame = -1 / +2
Query: 796 HPXAXSINIXXXXWKMYFDXXLPXXXXXXSDGNAGSSALXXXTCLQXXS 650
H A SINI W MYF +P DGN S+A+ CLQ S
Sbjct: 3947 HFAADSININKKIWNMYFRDLVPRLVKKGDDGNYXSTAVCDAICLQVCS 4093
>gb|BX840398.1|BX840398 BX840398 Arabidopsis thaliana Hormone Treated Callus Col-0
Arabidopsis thaliana cDNA clone GSLTPGH61ZC01 5PRIM,
mRNA sequence
Length = 977
Score = 138 bits (295), Expect = 3e-031
Identities = 61/122 (50%), Positives = 75/122 (61%)
Frame = -1 / +1
Query: 811 YXXXXHPXAXSINIXXXXWKMYFDXXLPXXXXXXSDGNAGSSALXXXTCLQXXSRRIXYG 632
Y H A SINI W MYF +P DGN GS+A+ CLQ S+RI YG
Sbjct: 571 YPKVLHFAADSININKKIWNMYFRDLVPRLVKKGDDGNYGSTAVCYAICLQCLSKRIHYG 750
Query: 631 KFXXXAKFQESPEAYTPAIIAQDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNIGAK 452
KF AKFQ SPEAY AI AQD+D LM++LT TVE A++ RVE K + +GQEV +G +
Sbjct: 751 KFVAEAKFQASPEAYESAIKAQDKDALMDMLTFPTVEDAIKKRVEMKTRTYGQEVKVGME 930
Query: 451 DK 446
+K
Sbjct: 931 EK 936
>gb|AI995910.1|AI995910 701549173 A. thaliana, Columbia Col-0, inflorescence-2 Arabidopsis
thaliana cDNA clone 701549173, mRNA sequence
Length = 461
Score = 78.5 bits (165), Expect(2) = 2e-028
Identities = 33/52 (63%), Positives = 41/52 (78%)
Frame = -1 / -2
Query: 484 IFGQEVNIGAKDKGSPPVYKIRPSLVAELYSYRIMPLTKEVEVAYLLRRLD* 329
IFGQ++ I + + P YKI+PSLVA+LY RIMPLTKEV++ YLLRRLD*
Sbjct: 298 IFGQDITINDPETEADPSYKIQPSLVAKLYGERIMPLTKEVQIEYLLRRLD* 143
Score = 70.3 bits (147), Expect(2) = 2e-028
Identities = 33/61 (54%), Positives = 38/61 (62%)
Frame = -1 / -1
Query: 646 RIXYGKFXXXAKFQESPEAYTPAIIAQDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEV 467
RI +GKF AKF+E+P AY AI QDR QLM LLT TVE V+ RVE K+ F
Sbjct: 461 RIHFGKFVAEAKFRENPAAYETAIKEQDRTQLMQLLTYETVEEVVKKRVEIKSXDFWSRH 282
Query: 466 N 464
N
Sbjct: 281 N 279
>emb|AL365234.1|ATT30N20 Arabidopsis thaliana DNA chromosome 5, BAC clone T30N20 (ESSA project)
Length = 98473
Score = 48.3 bits (99), Expect(4) = 1e-027
Identities = 20/35 (57%), Positives = 26/35 (74%)
Frame = -1 / -3
Query: 430 YKIRPSLVAELYSYRIMPLTKEVEVAYLLRRLD*V 326
YK+ P L + +Y ++PLTK VEV YLLRRLD*+
Sbjct: 38420 YKVDPLLASRIYGEWLIPLTKLVEVEYLLRRLD*I 38316
Score = 45.5 bits (93), Expect(4) = 1e-027
Identities = 19/46 (41%), Positives = 22/46 (47%)
Frame = -1 / -2
Query: 796 HPXAXSINIXXXXWKMYFDXXLPXXXXXXSDGNAGSSALXXXTCLQ 659
HP A S+NI W +YF LP DGN S+A CLQ
Sbjct: 38964 HPKALSVNINKQIWDIYFKELLPLFVKPGDDGNYPSTAASDLACLQ 38827
Score = 43.7 bits (89), Expect(4) = 1e-027
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = -1 / -3
Query: 565 DRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNIGA 455
DR+ LM LLT VE V+ RV+ KA+ FGQEV +
Sbjct: 38558 DREALMKLLTFEKVEEMVKKRVQKKAETFGQEVKFNS 38448
Score = 43.2 bits (88), Expect(4) = 1e-027
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = -1 / -1
Query: 652 SRRIXYGKFXXXAKFQESPEAYTPAIIAQ 566
SRRI YGKF KF+++P+ Y PAI AQ
Sbjct: 38734 SRRIHYGKFVAEVKFRDAPQDYEPAIRAQ 38648
>emb|AJ242648.1|ATH242648 Arabidopsis thaliana CM2 gene for cytosolic chorismate mutase, exons
1-6
Length = 5177
Score = 48.3 bits (99), Expect(4) = 1e-027
Identities = 20/35 (57%), Positives = 26/35 (74%)
Frame = -1 / +2
Query: 430 YKIRPSLVAELYSYRIMPLTKEVEVAYLLRRLD*V 326
YK+ P L + +Y ++PLTK VEV YLLRRLD*+
Sbjct: 4019 YKVDPLLASRIYGEWLIPLTKLVEVEYLLRRLD*I 4123
Score = 45.5 bits (93), Expect(4) = 1e-027
Identities = 19/46 (41%), Positives = 22/46 (47%)
Frame = -1 / +1
Query: 796 HPXAXSINIXXXXWKMYFDXXLPXXXXXXSDGNAGSSALXXXTCLQ 659
HP A S+NI W +YF LP DGN S+A CLQ
Sbjct: 3475 HPKALSVNINKQIWDIYFKELLPLFVKPGDDGNYPSTAASDLACLQ 3612
Score = 43.7 bits (89), Expect(4) = 1e-027
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = -1 / +2
Query: 565 DRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNIGA 455
DR+ LM LLT VE V+ RV+ KA+ FGQEV +
Sbjct: 3881 DREALMKLLTFEKVEEMVKKRVQKKAETFGQEVKFNS 3991
Score = 43.2 bits (88), Expect(4) = 1e-027
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = -1 / +3
Query: 652 SRRIXYGKFXXXAKFQESPEAYTPAIIAQ 566
SRRI YGKF KF+++P+ Y PAI AQ
Sbjct: 3705 SRRIHYGKFVAEVKFRDAPQDYEPAIRAQ 3791
>emb|AX464578.1| Sequence 6 from Patent WO0202798
Length = 5176
Score = 48.3 bits (99), Expect(4) = 1e-027
Identities = 20/35 (57%), Positives = 26/35 (74%)
Frame = -1 / +1
Query: 430 YKIRPSLVAELYSYRIMPLTKEVEVAYLLRRLD*V 326
YK+ P L + +Y ++PLTK VEV YLLRRLD*+
Sbjct: 4018 YKVDPLLASRIYGEWLIPLTKLVEVEYLLRRLD*I 4122
Score = 45.5 bits (93), Expect(4) = 1e-027
Identities = 19/46 (41%), Positives = 22/46 (47%)
Frame = -1 / +3
Query: 796 HPXAXSINIXXXXWKMYFDXXLPXXXXXXSDGNAGSSALXXXTCLQ 659
HP A S+NI W +YF LP DGN S+A CLQ
Sbjct: 3474 HPKALSVNINKQIWDIYFKELLPLFVKPGDDGNYPSTAASDLACLQ 3611
Score = 43.7 bits (89), Expect(4) = 1e-027
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = -1 / +1
Query: 565 DRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNIGA 455
DR+ LM LLT VE V+ RV+ KA+ FGQEV +
Sbjct: 3880 DREALMKLLTFEKVEEMVKKRVQKKAETFGQEVKFNS 3990
Score = 43.2 bits (88), Expect(4) = 1e-027
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = -1 / +2
Query: 652 SRRIXYGKFXXXAKFQESPEAYTPAIIAQ 566
SRRI YGKF KF+++P+ Y PAI AQ
Sbjct: 3704 SRRIHYGKFVAEVKFRDAPQDYEPAIRAQ 3790
>gb|AW004329.1|AW004329 701956468 A. thaliana, mixed source Arabidopsis thaliana cDNA clone
701956468, mRNA sequence
Length = 500
Score = 84.9 bits (179), Expect(2) = 1e-026
Identities = 36/65 (55%), Positives = 45/65 (69%)
Frame = -1 / -2
Query: 652 SRRIXYGKFXXXAKFQESPEAYTPAIIAQDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQ 473
S+ I YGKF AKFQ SPEAY AI AQD+D LM++LT T E A++ R E K + +GQ
Sbjct: 469 SKXIHYGKFVAEAKFQASPEAYESAIKAQDKDALMDMLTFPTXEDAIKXRXEMKTRTYGQ 290
Query: 472 EVNIG 458
EV +G
Sbjct: 289 EVKVG 275
Score = 57.4 bits (119), Expect(2) = 1e-026
Identities = 26/35 (74%), Positives = 28/35 (80%)
Frame = -1 / -2
Query: 433 VYKIRPSLVAELYSYRIMPLTKEVEVAYLLRRLD* 329
VYKI P LV +LY IMPLTKEV+V YLLRRLD*
Sbjct: 229 VYKISPILVGDLYGDWIMPLTKEVQVEYLLRRLD* 125
>gb|BX839097.1|BX839097 BX839097 Arabidopsis thaliana Adult vegetative tissue Col-0
Arabidopsis thaliana cDNA clone GSLTLS95ZC11 5PRIM, mRNA
sequence
Length = 1025
Score = 122 bits (260), Expect = 2e-026
Identities = 57/118 (48%), Positives = 69/118 (58%)
Frame = -1 / +3
Query: 811 YXXXXHPXAXSINIXXXXWKMYFDXXLPXXXXXXSDGNAGSSALXXXTCLQXXSRRIXYG 632
Y H A SINI W MYF +P DGN GS+A+ CLQ S+RI YG
Sbjct: 627 YRKVLHFAADSININKKIWNMYFRDLVPRLVKKGDDGNYGSTAVCDAICLQCLSKRIHYG 806
Query: 631 KFXXXAKFQESPEAYTPAIIAQDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNIG 458
KF AKFQ SPEAY AI AQD+D LM++LT TVE A++ RVE K + G+ +G
Sbjct: 807 KFVAEAKFQASPEAYESAIKAQDKDALMDMLTFPTVEDAIKKRVEMKPENTGKM*ELG 980
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 116 bits (247), Expect = 1e-024
Identities = 51/80 (63%), Positives = 61/80 (76%)
Frame = -1 / +1
Query: 568 QDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNIGAKDKGSPPVYKIRPSLVAELYSY 389
QDR QLM LLT TVE V+ RVE KA+IFGQ++ I + + P YKI+PSLVA+LY
Sbjct: 26084983 QDRTQLMQLLTYETVEEVVKKRVEIKARIFGQDITINDPETEADPSYKIQPSLVAKLYGE 26085162
Query: 388 RIMPLTKEVEVAYLLRRLD* 329
RIMPLTKEV++ YLLRRLD*
Sbjct: 26085163 RIMPLTKEVQIEYLLRRLD* 26085222
>gb|BP793254.1|BP793254 BP793254 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-55-I17 3',
mRNA sequence
Length = 402
Score = 111 bits (236), Expect = 4e-023
Identities = 49/78 (62%), Positives = 59/78 (75%)
Frame = -1 / -2
Query: 562 RDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNIGAKDKGSPPVYKIRPSLVAELYSYRI 383
R QLM LLT TVE V+ RVE KA+IFGQ++ I + + P YKI+PSLVA+LY RI
Sbjct: 401 RTQLMQLLTYETVEEVVKKRVEIKARIFGQDITINDPETEADPSYKIQPSLVAKLYGERI 222
Query: 382 MPLTKEVEVAYLLRRLD* 329
MPLTKEV++ YLLRRLD*
Sbjct: 221 MPLTKEVQIEYLLRRLD* 168
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,495,612,022
Number of Sequences: 1013581
Number of extensions: 21812431
Number of successful extensions: 121332
Number of sequences better than 1.0e-020: 45
length of database: 302,980,290
effective HSP length: 56
effective length of database: 246,219,754
effective search space used: 55645664404
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)