TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2486118.2.1
(635 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AV521149.1|AV521149 AV521149 Arabidopsis thaliana aboveg... 264 2e-069
gb|AV523332.1|AV523332 AV523332 Arabidopsis thaliana aboveg... 264 2e-069
gb|AF232907.1|AF232907 Arabidopsis thaliana cellulose synth... 264 2e-069
gb|AF360180.1| Arabidopsis thaliana putative cellulose synt... 264 2e-069
gb|AY039996.1| Arabidopsis thaliana putative cellulose synt... 264 2e-069
emb|AJ297948.1|ATH297948 Arabidopsis thaliana CSLD3 gene fo... 264 2e-069
gb|AC012328.6|ATAC012328 Arabidopsis thaliana chromosome II... 264 2e-069
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 264 2e-069
ref|NM_111175.2| Arabidopsis thaliana CSLD3 (CELLULOSE SYNT... 264 2e-069
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 264 2e-069
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 259 6e-068
emb|AL391141.1|ATF2K13 Arabidopsis thaliana DNA chromosome ... 259 6e-068
ref|NM_121697.3| Arabidopsis thaliana ATCSLD2; cellulose sy... 259 6e-068
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 259 6e-068
gb|AV542787.1|AV542787 AV542787 Arabidopsis thaliana roots ... 248 2e-064
gb|AV546912.1|AV546912 AV546912 Arabidopsis thaliana roots ... 217 2e-055
gb|AV548317.1|AV548317 AV548317 Arabidopsis thaliana roots ... 217 2e-055
gb|AV548647.1|AV548647 AV548647 Arabidopsis thaliana roots ... 217 2e-055
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 215 7e-055
gb|AC009525.3| Arabidopsis thaliana chromosome I BAC F22D16... 215 7e-055
gb|AC022521.4|AC022521 Arabidopsis thaliana chromosome I BA... 215 7e-055
ref|NM_100153.2| Arabidopsis thaliana ATCSLD5; cellulose sy... 215 7e-055
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 215 7e-055
gb|AI998478.1|AI998478 701545861 A. thaliana, Columbia Col-... 188 9e-055
gb|BT005743.1| Arabidopsis thaliana clone RAFL15-50-B21 (R5... 215 1e-054
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 215 1e-054
emb|AL035538.1|ATF20D10 Arabidopsis thaliana DNA chromosome... 215 1e-054
emb|AL161593.2|ATCHRIV89 Arabidopsis thaliana DNA chromosom... 215 1e-054
ref|NM_119980.2| Arabidopsis thaliana ATCSLD4; cellulose sy... 215 1e-054
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 215 1e-054
emb|BX818076.1|CNS0ACOJ Arabidopsis thaliana Full-length cD... 215 1e-054
gb|CW802323.1|CW802323 WiscDsLox477-480I22 Arabidopsis thal... 208 2e-052
gb|AV798801.1|AV798801 AV798801 RAFL9 Arabidopsis thaliana ... 203 5e-051
gb|AC002334.3| Arabidopsis thaliana chromosome 2 clone F25I... 200 4e-050
ref|NM_128870.3| Arabidopsis thaliana ATCSLD1; cellulose sy... 200 4e-050
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 200 4e-050
gb|AV548634.1|AV548634 AV548634 Arabidopsis thaliana roots ... 198 1e-049
dbj|AK175868.1| Arabidopsis thaliana mRNA for putative cell... 198 1e-049
gb|AI996738.1|AI996738 701668165 A. thaliana, Columbia Col-... 186 7e-046
gb|AV817996.1|AV817996 AV817996 RAFL9 Arabidopsis thaliana ... 185 1e-045
gb|Z35212.1|Z35212 ATTS3758 Strasbourg-A Arabidopsis thalia... 184 2e-045
gb|AV796167.1|AV796167 AV796167 RAFL9 Arabidopsis thaliana ... 159 2e-044
emb|AL807029.1| Arabidopsis thaliana transposon insertion S... 175 1e-042
gb|AC084165.1|AC084165 Arabidopsis thaliana chromosome 1 BA... 175 1e-042
ref|NM_102951.1| Arabidopsis thaliana ATCSLD6; cellulose sy... 175 1e-042
gb|AV546030.1|AV546030 AV546030 Arabidopsis thaliana roots ... 172 1e-041
gb|BP654668.1|BP654668 BP654668 RAFL19 Arabidopsis thaliana... 161 2e-038
gb|AV536640.1|AV536640 AV536640 Arabidopsis thaliana liquid... 158 1e-037
gb|AV536646.1|AV536646 AV536646 Arabidopsis thaliana liquid... 158 1e-037
gb|AC006300.4| Arabidopsis thaliana chromosome 2 clone F13B... 155 1e-036
emb|BX821788.1|CNS0A924 Arabidopsis thaliana Full-length cD... 155 1e-036
emb|BX822015.1|CNS0AAAJ Arabidopsis thaliana Full-length cD... 155 1e-036
ref|NM_128111.2| Arabidopsis thaliana CESA10 (CELLULASE SYN... 155 1e-036
gb|AV548594.1|AV548594 AV548594 Arabidopsis thaliana roots ... 153 6e-036
gb|BP653838.1|BP653838 BP653838 RAFL19 Arabidopsis thaliana... 101 9e-036
gb|AV552905.1|AV552905 AV552905 Arabidopsis thaliana roots ... 152 1e-035
gb|CK121679.1|CK121679 202d06.p1 AtM1 Arabidopsis thaliana ... 152 1e-035
gb|AF027172.1|AF027172 Arabidopsis thaliana cellulose synth... 152 1e-035
dbj|BD022674.1| Manipulation of cellulose and/or beta-1,4-g... 152 1e-035
dbj|BD022676.1| Manipulation of cellulose and/or beta-1,4-g... 152 1e-035
dbj|BD022679.1| Manipulation of cellulose and/or beta-1,4-g... 152 1e-035
emb|AX030940.1| Sequence 3 from Patent WO9800549 152 1e-035
emb|AX030942.1| Sequence 5 from Patent WO9800549 152 1e-035
emb|AX030948.1| Sequence 11 from Patent WO9800549 152 1e-035
gb|BT008654.1| Arabidopsis thaliana clone RAFL09-89-G08 (R1... 152 1e-035
emb|BX827280.1|CNS0A2E6 Arabidopsis thaliana Full-length cD... 152 1e-035
emb|AL034567.1|ATF8B4 Arabidopsis thaliana DNA chromosome 4... 152 1e-035
emb|AL161581.2|ATCHRIV77 Arabidopsis thaliana DNA chromosom... 152 1e-035
dbj|AK222115.1| Arabidopsis thaliana mRNA for cellulose syn... 152 1e-035
ref|NM_119393.2| Arabidopsis thaliana CESA1 (CELLULASE SYNT... 152 1e-035
gb|T20516.1|T20516 2524 Lambda-PRL2 Arabidopsis thaliana cD... 150 4e-035
gb|CK117572.1|CK117572 215o03.p1 AtM1 Arabidopsis thaliana ... 150 4e-035
gb|AQ967081.1|AQ967081 LERIP40TF LERG Arabidopsis thaliana ... 149 5e-035
gb|AQ967082.1|AQ967082 LERIP40TR LERG Arabidopsis thaliana ... 149 5e-035
gb|AV811500.1|AV811500 AV811500 RAFL9 Arabidopsis thaliana ... 149 5e-035
gb|AF267742.1|AF267742 Arabidopsis thaliana cellulose synth... 149 5e-035
gb|AY099636.1| Arabidopsis thaliana cellulose synthase-like... 149 5e-035
emb|AL035526.1|ATF28A21 Arabidopsis thaliana DNA chromosome... 149 5e-035
emb|AL161549.2|ATCHRIV49 Arabidopsis thaliana DNA chromosom... 149 5e-035
ref|NM_117993.2| Arabidopsis thaliana MYB98; DNA binding / ... 149 5e-035
ref|NM_117994.2| Arabidopsis thaliana CESA8 (CELLULASE SYNT... 149 5e-035
gb|AV523635.1|AV523635 AV523635 Arabidopsis thaliana aboveg... 149 8e-035
gb|AF027174.1|AF027174 Arabidopsis thaliana cellulose synth... 149 8e-035
dbj|BD022678.1| Manipulation of cellulose and/or beta-1,4-g... 149 8e-035
emb|AX030946.1| Sequence 9 from Patent WO9800549 149 8e-035
gb|BT002335.1| Arabidopsis thaliana clone C104938 putative ... 149 8e-035
emb|BX833092.1|CNS0A0FM Arabidopsis thaliana Full-length cD... 149 8e-035
dbj|AB018111.1| Arabidopsis thaliana genomic DNA, chromosom... 149 8e-035
ref|NM_120599.2| Arabidopsis thaliana CESA3 (CELLULASE SYNT... 149 8e-035
gb|AV523438.1|AV523438 AV523438 Arabidopsis thaliana aboveg... 148 1e-034
gb|AV538027.1|AV538027 AV538027 Arabidopsis thaliana roots ... 148 2e-034
gb|AV566035.1|AV566035 AV566035 Arabidopsis thaliana green ... 148 2e-034
gb|AF091713.1|AF091713 Arabidopsis thaliana cellulose synth... 148 2e-034
gb|AF088917.1|AF088917 Arabidopsis thaliana cellulose synth... 148 2e-034
gb|AY139754.1| Arabidopsis thaliana AT5g17420/T10B6_80 mRNA... 148 2e-034
gb|BT004543.1| Arabidopsis thaliana AT5g17420/T10B6_80 gene... 148 2e-034
emb|BX829237.1|CNS0A4ID Arabidopsis thaliana Full-length cD... 148 2e-034
emb|AL391142.1|ATT10B6 Arabidopsis thaliana DNA chromosome ... 148 2e-034
dbj|AK220815.1| Arabidopsis thaliana mRNA for cellulose syn... 148 2e-034
ref|NM_121747.2| Arabidopsis thaliana unknown protein AT5G1... 148 2e-034
ref|NM_180507.1| Arabidopsis thaliana unknown protein AT5G1... 148 2e-034
ref|NM_121748.2| Arabidopsis thaliana IRX3 (IRREGULAR XYLEM... 148 2e-034
gb|BE038216.1|BE038216 AA10E02 AA Arabidopsis thaliana cDNA... 147 3e-034
gb|AV544917.1|AV544917 AV544917 Arabidopsis thaliana roots ... 146 5e-034
gb|AV563704.1|AV563704 AV563704 Arabidopsis thaliana green ... 146 5e-034
dbj|BD022673.1| Manipulation of cellulose and/or beta-1,4-g... 146 5e-034
emb|AX030938.1| Sequence 1 from Patent WO9800549 146 5e-034
gb|AF458083.1| Arabidopsis thaliana cellulose synthase (IRX... 146 5e-034
gb|BT005710.1| Arabidopsis thaliana clone RAFL15-30-K05 (R5... 146 5e-034
gb|BT006111.1| Arabidopsis thaliana clone U50150 putative c... 146 5e-034
emb|BX833432.1|CNS09Z0L Arabidopsis thaliana Full-length cD... 146 5e-034
dbj|AB006703.1| Arabidopsis thaliana genomic DNA, chromosom... 146 5e-034
ref|NM_123770.2| Arabidopsis thaliana CESA4 (CELLULASE SYNT... 146 5e-034
ref|NM_123771.3| Arabidopsis thaliana unknown protein AT5G4... 146 5e-034
gb|AV560162.1|AV560162 AV560162 Arabidopsis thaliana green ... 146 7e-034
gb|AV546683.1|AV546683 AV546683 Arabidopsis thaliana roots ... 145 1e-033
gb|AV524358.1|AV524358 AV524358 Arabidopsis thaliana aboveg... 144 2e-033
gb|AY136423.1| Arabidopsis thaliana cellulose synthase cata... 144 2e-033
gb|BT008832.1| Arabidopsis thaliana At5g09870 mRNA, complet... 144 2e-033
dbj|AB016893.1| Arabidopsis thaliana genomic DNA, chromosom... 144 2e-033
ref|NM_121024.1| Arabidopsis thaliana CESA5 (CELLULASE SYNT... 144 2e-033
gb|AV782896.1|AV782896 AV782896 RAFL5 Arabidopsis thaliana ... 143 6e-033
gb|AV548218.1|AV548218 AV548218 Arabidopsis thaliana roots ... 143 6e-033
gb|AF062485.1|AF062485 Arabidopsis thaliana cellulose synth... 143 6e-033
gb|AF375439.1| Arabidopsis thaliana AT5g64740/MVP7_7 mRNA, ... 143 6e-033
emb|AX507835.1| Sequence 2530 from Patent WO0216655 143 6e-033
gb|AY143957.1| Arabidopsis thaliana At5g64740/MVP7_7 mRNA, ... 143 6e-033
dbj|AB025637.1| Arabidopsis thaliana genomic DNA, chromosom... 143 6e-033
ref|NM_125870.2| Arabidopsis thaliana CESA6 (CELLULASE SYNT... 143 6e-033
gb|AI999519.1|AI999519 701556274 A. thaliana, Columbia Col-... 142 9e-033
gb|AC007019.5| Arabidopsis thaliana chromosome 2 clone F7D8... 142 9e-033
ref|NM_127746.1| Arabidopsis thaliana CESA9 (CELLULASE SYNT... 142 9e-033
gb|AV810887.1|AV810887 AV810887 RAFL9 Arabidopsis thaliana ... 142 1e-032
gb|AV521693.1|AV521693 AV521693 Arabidopsis thaliana aboveg... 142 1e-032
gb|AV816883.1|AV816883 AV816883 RAFL9 Arabidopsis thaliana ... 141 2e-032
gb|CW847378.1|CW847378 GT14441.Ds3.05.23.2004.jx61.614 Arab... 138 2e-031
dbj|BD022677.1| Manipulation of cellulose and/or beta-1,4-g... 136 8e-031
emb|AX030944.1| Sequence 7 from Patent WO9800549 136 8e-031
gb|AV823492.1|AV823492 AV823492 RAFL5 Arabidopsis thaliana ... 135 1e-030
gb|AV538691.1|AV538691 AV538691 Arabidopsis thaliana roots ... 135 1e-030
gb|AF027173.1|AF027173 Arabidopsis thaliana cellulose synth... 135 1e-030
gb|AY059858.1| Arabidopsis thaliana cellulose synthase cata... 135 1e-030
gb|AY093308.1| Arabidopsis thaliana cellulose synthase cata... 135 1e-030
gb|AY045960.1| Arabidopsis thaliana putative cellulose synt... 135 1e-030
emb|AX505864.1| Sequence 559 from Patent WO0216655 135 1e-030
emb|AL050351.1|ATT22F8 Arabidopsis thaliana DNA chromosome ... 135 1e-030
emb|AL161595.2|ATCHRIV91 Arabidopsis thaliana DNA chromosom... 135 1e-030
ref|NM_120095.2| Arabidopsis thaliana CESA2; cellulose synt... 135 1e-030
gb|AV547198.1|AV547198 AV547198 Arabidopsis thaliana roots ... 135 1e-030
gb|AU228138.1|AU228138 AU228138 RAFL15 Arabidopsis thaliana... 124 2e-030
emb|AL080857.1|CNS00MNV Arabidopsis thaliana genome survey ... 134 2e-030
emb|BX832166.1|CNS0A1ML Arabidopsis thaliana Full-length cD... 134 2e-030
gb|AV442267.1|AV442267 AV442267 Arabidopsis thaliana above-... 133 4e-030
gb|CB260895.1|CB260895 56-E9408-012-002-P07-t7r MPIZ-ADIS-0... 132 1e-029
gb|AV547760.1|AV547760 AV547760 Arabidopsis thaliana roots ... 131 2e-029
gb|CD532721.1|CD532721 28I10 Arabidopsis Leaf Senescence Li... 130 3e-029
gb|B96505.1|B96505 F23A23TF IGF Arabidopsis thaliana genomi... 130 5e-029
gb|BP639474.1|BP639474 BP639474 RAFL19 Arabidopsis thaliana... 86 4e-028
gb|AV523139.1|AV523139 AV523139 Arabidopsis thaliana aboveg... 127 4e-028
gb|AV813548.1|AV813548 AV813548 RAFL9 Arabidopsis thaliana ... 125 2e-027
gb|AV536050.1|AV536050 AV536050 Arabidopsis thaliana flower... 124 2e-027
gb|BP641136.1|BP641136 BP641136 RAFL19 Arabidopsis thaliana... 124 2e-027
gb|CB256789.1|CB256789 61-E011664-027-006-I16-T7R MPIZ-ADIS... 123 5e-027
gb|AV548122.1|AV548122 AV548122 Arabidopsis thaliana roots ... 121 2e-026
gb|AV557902.1|AV557902 AV557902 Arabidopsis thaliana green ... 120 5e-026
gb|AV567406.1|AV567406 AV567406 Arabidopsis thaliana green ... 120 5e-026
gb|AV550996.1|AV550996 AV550996 Arabidopsis thaliana roots ... 117 2e-025
gb|AV782576.1|AV782576 AV782576 RAFL4 Arabidopsis thaliana ... 116 6e-025
gb|BP643478.1|BP643478 BP643478 RAFL19 Arabidopsis thaliana... 116 6e-025
gb|AV784570.1|AV784570 AV784570 RAFL5 Arabidopsis thaliana ... 116 9e-025
gb|AI995332.1|AI995332 701673135 A. thaliana, Columbia Col-... 115 1e-024
gb|AU227892.1|AU227892 AU227892 RAFL15 Arabidopsis thaliana... 115 1e-024
gb|AV817718.1|AV817718 AV817718 RAFL9 Arabidopsis thaliana ... 115 2e-024
gb|AV530046.1|AV530046 AV530046 Arabidopsis thaliana aboveg... 114 2e-024
emb|BX833785.1|CNS0A0C4 Arabidopsis thaliana Full-length cD... 114 2e-024
emb|CR379925.1| Arabidopsis thaliana transposon insertion S... 114 2e-024
gb|AV524115.1|AV524115 AV524115 Arabidopsis thaliana aboveg... 114 3e-024
emb|BX829135.1|CNS0A3FB Arabidopsis thaliana Full-length cD... 114 3e-024
gb|AV539863.1|AV539863 AV539863 Arabidopsis thaliana roots ... 113 4e-024
gb|BP804846.1|BP804846 BP804846 RAFL16 Arabidopsis thaliana... 110 5e-024
gb|T45311.1|T45311 8574 Lambda-PRL2 Arabidopsis thaliana cD... 112 1e-023
gb|AQ964327.1|AQ964327 LERGV37TR LERG Arabidopsis thaliana ... 111 3e-023
gb|AI994106.1|AI994106 701498975 A. thaliana, Ohio State cl... 109 8e-023
gb|AV560166.1|AV560166 AV560166 Arabidopsis thaliana green ... 107 4e-022
gb|BH810657.1|BH810657 SALK_051024 Arabidopsis thaliana TDN... 105 1e-021
gb|AV559974.1|AV559974 AV559974 Arabidopsis thaliana green ... 105 1e-021
>gb|AV521149.1|AV521149 AV521149 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZ45d05F 3', mRNA
sequence
Length = 631
Score = 264 bits (570), Expect = 2e-069
Identities = 106/120 (88%), Positives = 114/120 (95%)
Frame = +2 / -2
Query: 2 GGDDVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFS 181
GG+DVDDEF DLYIVKWTSLMIPPI IMMVNLI IAVGFSRTIYS IPQWSKL+GGVFFS
Sbjct: 597 GGEDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGFSRTIYSVIPQWSKLIGGVFFS 418
Query: 182 FWVLAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINPPSQNQQIGGSFTFP* 361
FWVLAHLYPFAKGLMGRRGRTPTIV+VW+GL++ITISLLWVAINPP+ + QIGGSFTFP*
Sbjct: 417 FWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVAITISLLWVAINPPAGSTQIGGSFTFP* 238
Score = 156 bits (335), Expect(2) = 1e-037
Identities = 71/106 (66%), Positives = 77/106 (72%)
Frame = -3 / +2
Query: 318 GGLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCASTQKLKKTPPSSLLHCGI 139
GGLMAT S +MVM P QT TMVGV PL PI PLANG R ASTQKLK TPP +LLHCGI
Sbjct: 281 GGLMATQSRDMVMATSPDQTYTMVGVLPLLPISPLANG*R*ASTQKLKNTPPINLLHCGI 460
Query: 138 SL*MVRLNPTAMPIRFTIMITMGGIISDVHLTMYRXXXXXXXXSPP 1
+L +V LNPTAM IRFTIMI +GGI+ DVH TM R SPP
Sbjct: 461 TLYIVLLNPTAMAIRFTIMIVIGGIMRDVHFTM*RSANSSSTSSPP 598
Score = 22.1 bits (42), Expect(2) = 1e-037
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -3 / +2
Query: 360 HGNVNDPPI 334
HG V DPPI
Sbjct: 239 HGKVKDPPI 265
>gb|AV523332.1|AV523332 AV523332 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZL24e03F 3', mRNA
sequence
Length = 620
Score = 264 bits (570), Expect = 2e-069
Identities = 106/120 (88%), Positives = 114/120 (95%)
Frame = +2 / -1
Query: 2 GGDDVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFS 181
GG+DVDDEF DLYIVKWTSLMIPPI IMMVNLI IAVGFSRTIYS IPQWSKL+GGVFFS
Sbjct: 557 GGEDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGFSRTIYSVIPQWSKLIGGVFFS 378
Query: 182 FWVLAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINPPSQNQQIGGSFTFP* 361
FWVLAHLYPFAKGLMGRRGRTPTIV+VW+GL++ITISLLWVAINPP+ + QIGGSFTFP*
Sbjct: 377 FWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVAITISLLWVAINPPAGSTQIGGSFTFP* 198
Score = 156 bits (335), Expect(2) = 1e-037
Identities = 71/106 (66%), Positives = 77/106 (72%)
Frame = -3 / +1
Query: 318 GGLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCASTQKLKKTPPSSLLHCGI 139
GGLMAT S +MVM P QT TMVGV PL PI PLANG R ASTQKLK TPP +LLHCGI
Sbjct: 241 GGLMATQSRDMVMATSPDQTYTMVGVLPLLPISPLANG*R*ASTQKLKNTPPINLLHCGI 420
Query: 138 SL*MVRLNPTAMPIRFTIMITMGGIISDVHLTMYRXXXXXXXXSPP 1
+L +V LNPTAM IRFTIMI +GGI+ DVH TM R SPP
Sbjct: 421 TLYIVLLNPTAMAIRFTIMIVIGGIMRDVHFTM*RSANSSSTSSPP 558
Score = 22.1 bits (42), Expect(2) = 1e-037
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -3 / +1
Query: 360 HGNVNDPPI 334
HG V DPPI
Sbjct: 199 HGKVKDPPI 225
>gb|AF232907.1|AF232907 Arabidopsis thaliana cellulose synthase-like CSLD3 (CslD3) mRNA,
complete cds
Length = 3827
Score = 264 bits (570), Expect = 2e-069
Identities = 106/120 (88%), Positives = 114/120 (95%)
Frame = +2 / +3
Query: 2 GGDDVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFS 181
GG+DVDDEF DLYIVKWTSLMIPPI IMMVNLI IAVGFSRTIYS IPQWSKL+GGVFFS
Sbjct: 3327 GGEDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGFSRTIYSVIPQWSKLIGGVFFS 3506
Query: 182 FWVLAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINPPSQNQQIGGSFTFP* 361
FWVLAHLYPFAKGLMGRRGRTPTIV+VW+GL++ITISLLWVAINPP+ + QIGGSFTFP*
Sbjct: 3507 FWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVAITISLLWVAINPPAGSTQIGGSFTFP* 3686
Score = 156 bits (335), Expect(2) = 1e-037
Identities = 71/106 (66%), Positives = 77/106 (72%)
Frame = -3 / -2
Query: 318 GGLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCASTQKLKKTPPSSLLHCGI 139
GGLMAT S +MVM P QT TMVGV PL PI PLANG R ASTQKLK TPP +LLHCGI
Sbjct: 3643 GGLMATQSRDMVMATSPDQTYTMVGVLPLLPISPLANG*R*ASTQKLKNTPPINLLHCGI 3464
Query: 138 SL*MVRLNPTAMPIRFTIMITMGGIISDVHLTMYRXXXXXXXXSPP 1
+L +V LNPTAM IRFTIMI +GGI+ DVH TM R SPP
Sbjct: 3463 TLYIVLLNPTAMAIRFTIMIVIGGIMRDVHFTM*RSANSSSTSSPP 3326
Score = 22.1 bits (42), Expect(2) = 1e-037
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -3 / -2
Query: 360 HGNVNDPPI 334
HG V DPPI
Sbjct: 3685 HGKVKDPPI 3659
>gb|AF360180.1| Arabidopsis thaliana putative cellulose synthase catalytic subunit
(At3g03050) mRNA, complete cds
Length = 3962
Score = 264 bits (570), Expect = 2e-069
Identities = 106/120 (88%), Positives = 114/120 (95%)
Frame = +2 / +1
Query: 2 GGDDVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFS 181
GG+DVDDEF DLYIVKWTSLMIPPI IMMVNLI IAVGFSRTIYS IPQWSKL+GGVFFS
Sbjct: 3331 GGEDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGFSRTIYSVIPQWSKLIGGVFFS 3510
Query: 182 FWVLAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINPPSQNQQIGGSFTFP* 361
FWVLAHLYPFAKGLMGRRGRTPTIV+VW+GL++ITISLLWVAINPP+ + QIGGSFTFP*
Sbjct: 3511 FWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVAITISLLWVAINPPAGSTQIGGSFTFP* 3690
Score = 156 bits (335), Expect(2) = 1e-037
Identities = 71/106 (66%), Positives = 77/106 (72%)
Frame = -3 / -1
Query: 318 GGLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCASTQKLKKTPPSSLLHCGI 139
GGLMAT S +MVM P QT TMVGV PL PI PLANG R ASTQKLK TPP +LLHCGI
Sbjct: 3647 GGLMATQSRDMVMATSPDQTYTMVGVLPLLPISPLANG*R*ASTQKLKNTPPINLLHCGI 3468
Query: 138 SL*MVRLNPTAMPIRFTIMITMGGIISDVHLTMYRXXXXXXXXSPP 1
+L +V LNPTAM IRFTIMI +GGI+ DVH TM R SPP
Sbjct: 3467 TLYIVLLNPTAMAIRFTIMIVIGGIMRDVHFTM*RSANSSSTSSPP 3330
Score = 22.1 bits (42), Expect(2) = 1e-037
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -3 / -1
Query: 360 HGNVNDPPI 334
HG V DPPI
Sbjct: 3689 HGKVKDPPI 3663
>gb|AY039996.1| Arabidopsis thaliana putative cellulose synthase catalytic subunit
(At3g03050) mRNA, complete cds
Length = 3438
Score = 264 bits (570), Expect = 2e-069
Identities = 106/120 (88%), Positives = 114/120 (95%)
Frame = +2 / +1
Query: 2 GGDDVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFS 181
GG+DVDDEF DLYIVKWTSLMIPPI IMMVNLI IAVGFSRTIYS IPQWSKL+GGVFFS
Sbjct: 3079 GGEDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGFSRTIYSVIPQWSKLIGGVFFS 3258
Query: 182 FWVLAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINPPSQNQQIGGSFTFP* 361
FWVLAHLYPFAKGLMGRRGRTPTIV+VW+GL++ITISLLWVAINPP+ + QIGGSFTFP*
Sbjct: 3259 FWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVAITISLLWVAINPPAGSTQIGGSFTFP* 3438
Score = 156 bits (335), Expect = 6e-037
Identities = 71/106 (66%), Positives = 77/106 (72%)
Frame = -3 / -2
Query: 318 GGLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCASTQKLKKTPPSSLLHCGI 139
GGLMAT S +MVM P QT TMVGV PL PI PLANG R ASTQKLK TPP +LLHCGI
Sbjct: 3395 GGLMATQSRDMVMATSPDQTYTMVGVLPLLPISPLANG*R*ASTQKLKNTPPINLLHCGI 3216
Query: 138 SL*MVRLNPTAMPIRFTIMITMGGIISDVHLTMYRXXXXXXXXSPP 1
+L +V LNPTAM IRFTIMI +GGI+ DVH TM R SPP
Sbjct: 3215 TLYIVLLNPTAMAIRFTIMIVIGGIMRDVHFTM*RSANSSSTSSPP 3078
>emb|AJ297948.1|ATH297948 Arabidopsis thaliana CSLD3 gene for cellulose synthase-like protein,
exons 1-3
Length = 5385
Score = 264 bits (570), Expect = 2e-069
Identities = 106/120 (88%), Positives = 114/120 (95%)
Frame = +2 / +1
Query: 2 GGDDVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFS 181
GG+DVDDEF DLYIVKWTSLMIPPI IMMVNLI IAVGFSRTIYS IPQWSKL+GGVFFS
Sbjct: 4603 GGEDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGFSRTIYSVIPQWSKLIGGVFFS 4782
Query: 182 FWVLAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINPPSQNQQIGGSFTFP* 361
FWVLAHLYPFAKGLMGRRGRTPTIV+VW+GL++ITISLLWVAINPP+ + QIGGSFTFP*
Sbjct: 4783 FWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVAITISLLWVAINPPAGSTQIGGSFTFP* 4962
Score = 156 bits (335), Expect(2) = 1e-037
Identities = 71/106 (66%), Positives = 77/106 (72%)
Frame = -3 / -2
Query: 318 GGLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCASTQKLKKTPPSSLLHCGI 139
GGLMAT S +MVM P QT TMVGV PL PI PLANG R ASTQKLK TPP +LLHCGI
Sbjct: 4919 GGLMATQSRDMVMATSPDQTYTMVGVLPLLPISPLANG*R*ASTQKLKNTPPINLLHCGI 4740
Query: 138 SL*MVRLNPTAMPIRFTIMITMGGIISDVHLTMYRXXXXXXXXSPP 1
+L +V LNPTAM IRFTIMI +GGI+ DVH TM R SPP
Sbjct: 4739 TLYIVLLNPTAMAIRFTIMIVIGGIMRDVHFTM*RSANSSSTSSPP 4602
Score = 22.1 bits (42), Expect(2) = 1e-037
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -3 / -2
Query: 360 HGNVNDPPI 334
HG V DPPI
Sbjct: 4961 HGKVKDPPI 4935
>gb|AC012328.6|ATAC012328 Arabidopsis thaliana chromosome III BAC T17B22 genomic sequence,
complete sequence
Length = 96540
Score = 264 bits (570), Expect = 2e-069
Identities = 106/120 (88%), Positives = 114/120 (95%)
Frame = +2 / -2
Query: 2 GGDDVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFS 181
GG+DVDDEF DLYIVKWTSLMIPPI IMMVNLI IAVGFSRTIYS IPQWSKL+GGVFFS
Sbjct: 89486 GGEDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGFSRTIYSVIPQWSKLIGGVFFS 89307
Query: 182 FWVLAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINPPSQNQQIGGSFTFP* 361
FWVLAHLYPFAKGLMGRRGRTPTIV+VW+GL++ITISLLWVAINPP+ + QIGGSFTFP*
Sbjct: 89306 FWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVAITISLLWVAINPPAGSTQIGGSFTFP* 89127
Score = 156 bits (335), Expect(2) = 1e-037
Identities = 71/106 (66%), Positives = 77/106 (72%)
Frame = -3 / +1
Query: 318 GGLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCASTQKLKKTPPSSLLHCGI 139
GGLMAT S +MVM P QT TMVGV PL PI PLANG R ASTQKLK TPP +LLHCGI
Sbjct: 89170 GGLMATQSRDMVMATSPDQTYTMVGVLPLLPISPLANG*R*ASTQKLKNTPPINLLHCGI 89349
Query: 138 SL*MVRLNPTAMPIRFTIMITMGGIISDVHLTMYRXXXXXXXXSPP 1
+L +V LNPTAM IRFTIMI +GGI+ DVH TM R SPP
Sbjct: 89350 TLYIVLLNPTAMAIRFTIMIVIGGIMRDVHFTM*RSANSSSTSSPP 89487
Score = 22.1 bits (42), Expect(2) = 1e-037
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -3 / +1
Query: 360 HGNVNDPPI 334
HG V DPPI
Sbjct: 89128 HGKVKDPPI 89154
>dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complete sequence
Length = 23403063
Score = 264 bits (570), Expect = 2e-069
Identities = 106/120 (88%), Positives = 114/120 (95%)
Frame = +2 / -2
Query: 2 GGDDVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFS 181
GG+DVDDEF DLYIVKWTSLMIPPI IMMVNLI IAVGFSRTIYS IPQWSKL+GGVFFS
Sbjct: 773711 GGEDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGFSRTIYSVIPQWSKLIGGVFFS 773532
Query: 182 FWVLAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINPPSQNQQIGGSFTFP* 361
FWVLAHLYPFAKGLMGRRGRTPTIV+VW+GL++ITISLLWVAINPP+ + QIGGSFTFP*
Sbjct: 773531 FWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVAITISLLWVAINPPAGSTQIGGSFTFP* 773352
Score = 156 bits (335), Expect = 6e-037
Identities = 71/106 (66%), Positives = 77/106 (72%)
Frame = -3 / +1
Query: 318 GGLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCASTQKLKKTPPSSLLHCGI 139
GGLMAT S +MVM P QT TMVGV PL PI PLANG R ASTQKLK TPP +LLHCGI
Sbjct: 773395 GGLMATQSRDMVMATSPDQTYTMVGVLPLLPISPLANG*R*ASTQKLKNTPPINLLHCGI 773574
Query: 138 SL*MVRLNPTAMPIRFTIMITMGGIISDVHLTMYRXXXXXXXXSPP 1
+L +V LNPTAM IRFTIMI +GGI+ DVH TM R SPP
Sbjct: 773575 TLYIVLLNPTAMAIRFTIMIVIGGIMRDVHFTM*RSANSSSTSSPP 773712
>ref|NM_111175.2| Arabidopsis thaliana CSLD3 (CELLULOSE SYNTHASE-LIKE 3); cellulose
synthase/ transferase, transferring glycosyl groups
AT3G03050 (CSLD3) mRNA, complete cds
Length = 4206
Score = 264 bits (570), Expect = 2e-069
Identities = 106/120 (88%), Positives = 114/120 (95%)
Frame = +2 / +2
Query: 2 GGDDVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFS 181
GG+DVDDEF DLYIVKWTSLMIPPI IMMVNLI IAVGFSRTIYS IPQWSKL+GGVFFS
Sbjct: 3578 GGEDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGFSRTIYSVIPQWSKLIGGVFFS 3757
Query: 182 FWVLAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINPPSQNQQIGGSFTFP* 361
FWVLAHLYPFAKGLMGRRGRTPTIV+VW+GL++ITISLLWVAINPP+ + QIGGSFTFP*
Sbjct: 3758 FWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVAITISLLWVAINPPAGSTQIGGSFTFP* 3937
Score = 156 bits (335), Expect(2) = 1e-037
Identities = 71/106 (66%), Positives = 77/106 (72%)
Frame = -3 / -1
Query: 318 GGLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCASTQKLKKTPPSSLLHCGI 139
GGLMAT S +MVM P QT TMVGV PL PI PLANG R ASTQKLK TPP +LLHCGI
Sbjct: 3894 GGLMATQSRDMVMATSPDQTYTMVGVLPLLPISPLANG*R*ASTQKLKNTPPINLLHCGI 3715
Query: 138 SL*MVRLNPTAMPIRFTIMITMGGIISDVHLTMYRXXXXXXXXSPP 1
+L +V LNPTAM IRFTIMI +GGI+ DVH TM R SPP
Sbjct: 3714 TLYIVLLNPTAMAIRFTIMIVIGGIMRDVHFTM*RSANSSSTSSPP 3577
Score = 22.1 bits (42), Expect(2) = 1e-037
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -3 / -1
Query: 360 HGNVNDPPI 334
HG V DPPI
Sbjct: 3936 HGKVKDPPI 3910
>ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complete sequence
Length = 23470805
Score = 264 bits (570), Expect = 2e-069
Identities = 106/120 (88%), Positives = 114/120 (95%)
Frame = +2 / +2
Query: 2 GGDDVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFS 181
GG+DVDDEF DLYIVKWTSLMIPPI IMMVNLI IAVGFSRTIYS IPQWSKL+GGVFFS
Sbjct: 691277 GGEDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGFSRTIYSVIPQWSKLIGGVFFS 691456
Query: 182 FWVLAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINPPSQNQQIGGSFTFP* 361
FWVLAHLYPFAKGLMGRRGRTPTIV+VW+GL++ITISLLWVAINPP+ + QIGGSFTFP*
Sbjct: 691457 FWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVAITISLLWVAINPPAGSTQIGGSFTFP* 691636
Score = 156 bits (335), Expect = 6e-037
Identities = 71/106 (66%), Positives = 77/106 (72%)
Frame = -3 / -3
Query: 318 GGLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCASTQKLKKTPPSSLLHCGI 139
GGLMAT S +MVM P QT TMVGV PL PI PLANG R ASTQKLK TPP +LLHCGI
Sbjct: 691593 GGLMATQSRDMVMATSPDQTYTMVGVLPLLPISPLANG*R*ASTQKLKNTPPINLLHCGI 691414
Query: 138 SL*MVRLNPTAMPIRFTIMITMGGIISDVHLTMYRXXXXXXXXSPP 1
+L +V LNPTAM IRFTIMI +GGI+ DVH TM R SPP
Sbjct: 691413 TLYIVLLNPTAMAIRFTIMIVIGGIMRDVHFTM*RSANSSSTSSPP 691276
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 259 bits (560), Expect = 6e-068
Identities = 101/120 (84%), Positives = 114/120 (95%)
Frame = +2 / +3
Query: 2 GGDDVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFS 181
GGDD+DDEF DLY+VKWTSLMIPPI I+MVNLI IAVGFSRTIYS +PQWSKL+GGVFFS
Sbjct: 5327907 GGDDIDDEFADLYMVKWTSLMIPPITIIMVNLIAIAVGFSRTIYSVVPQWSKLIGGVFFS 5328086
Query: 182 FWVLAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINPPSQNQQIGGSFTFP* 361
FWVLAHLYPFAKGLMGRRGRTPTIV+VW+GL++ITISLLWVAINPP+ N +IGG+F+FP*
Sbjct: 5328087 FWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVAITISLLWVAINPPAGNTEIGGNFSFP* 5328266
Score = 171 bits (368), Expect = 2e-041
Identities = 76/122 (62%), Positives = 87/122 (71%)
Frame = -3 / -1
Query: 366 SFHGNVNDPPICWFWDGGLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCAST 187
++HG + PPI GGLMAT EMVM RP QT T+VGV PL PIRPLANG RCA T
Sbjct: 5328271 TYHGKLKFPPISVLPAGGLMATQRREMVMATRPDQTYTIVGVLPLLPIRPLANG*RCAKT 5328092
Query: 186 QKLKKTPPSSLLHCGISL*MVRLNPTAMPIRFTIMITMGGIISDVHLTMYRXXXXXXXXS 7
QKLK TPP SLLH G +L*+V LNPTA+ IRFTIM+ +GGIIS+VH TMY+ S
Sbjct: 5328091 QKLKNTPPISLLH*GTTL*IVLLNPTAIAIRFTIMMVIGGIISEVHFTMYKSANSSSISS 5327912
Query: 6 PP 1
PP
Sbjct: 5327911 PP 5327906
Score = 149 bits (320), Expect = 8e-035
Identities = 56/102 (54%), Positives = 73/102 (71%)
Frame = +2 / -1
Query: 11 DVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWV 190
D D +F +LY+ KWT+L+IPP +++VNL+G+ G S I S W L G +FF+FWV
Sbjct: 1459798 DEDGDFAELYLFKWTTLLIPPTTLLIVNLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWV 1459619
Query: 191 LAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
+ HLYPF KGLMGR+ RTPTIV VW+ LL+ SLLWV I+P
Sbjct: 1459618 IVHLYPFLKGLMGRQNRTPTIVVVWSVLLASIFSLLWVRIDP 1459493
Score = 148 bits (317), Expect = 2e-034
Identities = 53/100 (53%), Positives = 72/100 (72%)
Frame = +2 / -1
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
DD+F +LY KWT+L+IPP ++++N++G+ G S I + W L G +FFSFWV+
Sbjct: 5490187 DDDFGELYAFKWTTLLIPPTTVLIINIVGVVAGISDAINNGYQSWGPLFGKLFFSFWVIV 5490008
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGLMGR+ RTPTIV +W+ LL+ SLLWV I+P
Sbjct: 5490007 HLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDP 5489888
Score = 146 bits (314), Expect = 5e-034
Identities = 54/105 (51%), Positives = 74/105 (70%)
Frame = +2 / +3
Query: 2 GGDDVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFS 181
G D DEF DLY+ KWT+L+IPP ++++N++G+ G S I + W L G +FF+
Sbjct: 16111917 GASDEADEFGDLYLFKWTTLLIPPTTLIILNMVGVVAGVSDAINNGYGSWGPLFGKLFFA 16112096
Query: 182 FWVLAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
FWV+ HLYPF KGLMGR+ RTPTIV +W+ LL+ SL+WV I+P
Sbjct: 16112097 FWVIVHLYPFLKGLMGRQNRTPTIVVLWSILLASIFSLVWVRIDP 16112231
Score = 144 bits (310), Expect = 2e-033
Identities = 52/100 (52%), Positives = 73/100 (73%)
Frame = +2 / +3
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
D EF +LYI KWTSL+IPP ++++N+IG+ VG S I + W L G +FF+FWV+
Sbjct: 2896707 DGEFSELYIFKWTSLLIPPTTLLIINVIGVIVGISDAISNGYDSWGPLFGRLFFAFWVIL 2896886
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGL+G++ R PTI+ VW+ LL+ ++LLWV +NP
Sbjct: 2896887 HLYPFLKGLLGKQDRMPTIILVWSILLASILTLLWVRVNP 2897006
Score = 143 bits (306), Expect = 6e-033
Identities = 51/100 (51%), Positives = 73/100 (73%)
Frame = +2 / +2
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
D EF DLY+ KWTSL+IPP+ ++++N+IG+ VG S I + W L G +FF+ WV+
Sbjct: 22911293 DGEFSDLYLFKWTSLLIPPMTLLIINVIGVIVGVSDAISNGYDSWGPLFGRLFFALWVII 22911472
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGL+G++ R PTI+ VW+ LL+ ++LLWV +NP
Sbjct: 22911473 HLYPFLKGLLGKQDRMPTIIVVWSILLASILTLLWVRVNP 22911592
>emb|AL391141.1|ATF2K13 Arabidopsis thaliana DNA chromosome 5, BAC clone F2K13 (ESSA project)
Length = 98101
Score = 259 bits (560), Expect = 6e-068
Identities = 101/120 (84%), Positives = 114/120 (95%)
Frame = +2 / +2
Query: 2 GGDDVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFS 181
GGDD+DDEF DLY+VKWTSLMIPPI I+MVNLI IAVGFSRTIYS +PQWSKL+GGVFFS
Sbjct: 22025 GGDDIDDEFADLYMVKWTSLMIPPITIIMVNLIAIAVGFSRTIYSVVPQWSKLIGGVFFS 22204
Query: 182 FWVLAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINPPSQNQQIGGSFTFP* 361
FWVLAHLYPFAKGLMGRRGRTPTIV+VW+GL++ITISLLWVAINPP+ N +IGG+F+FP*
Sbjct: 22205 FWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVAITISLLWVAINPPAGNTEIGGNFSFP* 22384
Score = 171 bits (368), Expect = 2e-041
Identities = 76/122 (62%), Positives = 87/122 (71%)
Frame = -3 / -2
Query: 366 SFHGNVNDPPICWFWDGGLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCAST 187
++HG + PPI GGLMAT EMVM RP QT T+VGV PL PIRPLANG RCA T
Sbjct: 22389 TYHGKLKFPPISVLPAGGLMATQRREMVMATRPDQTYTIVGVLPLLPIRPLANG*RCAKT 22210
Query: 186 QKLKKTPPSSLLHCGISL*MVRLNPTAMPIRFTIMITMGGIISDVHLTMYRXXXXXXXXS 7
QKLK TPP SLLH G +L*+V LNPTA+ IRFTIM+ +GGIIS+VH TMY+ S
Sbjct: 22209 QKLKNTPPISLLH*GTTL*IVLLNPTAIAIRFTIMMVIGGIISEVHFTMYKSANSSSISS 22030
Query: 6 PP 1
PP
Sbjct: 22029 PP 22024
>ref|NM_121697.3| Arabidopsis thaliana ATCSLD2; cellulose synthase/ transferase,
transferring glycosyl groups AT5G16910 (ATCSLD2) mRNA,
complete cds
Length = 3728
Score = 259 bits (560), Expect = 6e-068
Identities = 101/120 (84%), Positives = 114/120 (95%)
Frame = +2 / +1
Query: 2 GGDDVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFS 181
GGDD+DDEF DLY+VKWTSLMIPPI I+MVNLI IAVGFSRTIYS +PQWSKL+GGVFFS
Sbjct: 3079 GGDDIDDEFADLYMVKWTSLMIPPITIIMVNLIAIAVGFSRTIYSVVPQWSKLIGGVFFS 3258
Query: 182 FWVLAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINPPSQNQQIGGSFTFP* 361
FWVLAHLYPFAKGLMGRRGRTPTIV+VW+GL++ITISLLWVAINPP+ N +IGG+F+FP*
Sbjct: 3259 FWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVAITISLLWVAINPPAGNTEIGGNFSFP* 3438
Score = 171 bits (368), Expect = 2e-041
Identities = 76/122 (62%), Positives = 87/122 (71%)
Frame = -3 / -1
Query: 366 SFHGNVNDPPICWFWDGGLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCAST 187
++HG + PPI GGLMAT EMVM RP QT T+VGV PL PIRPLANG RCA T
Sbjct: 3443 TYHGKLKFPPISVLPAGGLMATQRREMVMATRPDQTYTIVGVLPLLPIRPLANG*RCAKT 3264
Query: 186 QKLKKTPPSSLLHCGISL*MVRLNPTAMPIRFTIMITMGGIISDVHLTMYRXXXXXXXXS 7
QKLK TPP SLLH G +L*+V LNPTA+ IRFTIM+ +GGIIS+VH TMY+ S
Sbjct: 3263 QKLKNTPPISLLH*GTTL*IVLLNPTAIAIRFTIMMVIGGIISEVHFTMYKSANSSSISS 3084
Query: 6 PP 1
PP
Sbjct: 3083 PP 3078
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 259 bits (560), Expect = 6e-068
Identities = 101/120 (84%), Positives = 114/120 (95%)
Frame = +2 / +3
Query: 2 GGDDVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFS 181
GGDD+DDEF DLY+VKWTSLMIPPI I+MVNLI IAVGFSRTIYS +PQWSKL+GGVFFS
Sbjct: 5564934 GGDDIDDEFADLYMVKWTSLMIPPITIIMVNLIAIAVGFSRTIYSVVPQWSKLIGGVFFS 5565113
Query: 182 FWVLAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINPPSQNQQIGGSFTFP* 361
FWVLAHLYPFAKGLMGRRGRTPTIV+VW+GL++ITISLLWVAINPP+ N +IGG+F+FP*
Sbjct: 5565114 FWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVAITISLLWVAINPPAGNTEIGGNFSFP* 5565293
Score = 171 bits (368), Expect = 2e-041
Identities = 76/122 (62%), Positives = 87/122 (71%)
Frame = -3 / -3
Query: 366 SFHGNVNDPPICWFWDGGLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCAST 187
++HG + PPI GGLMAT EMVM RP QT T+VGV PL PIRPLANG RCA T
Sbjct: 5565298 TYHGKLKFPPISVLPAGGLMATQRREMVMATRPDQTYTIVGVLPLLPIRPLANG*RCAKT 5565119
Query: 186 QKLKKTPPSSLLHCGISL*MVRLNPTAMPIRFTIMITMGGIISDVHLTMYRXXXXXXXXS 7
QKLK TPP SLLH G +L*+V LNPTA+ IRFTIM+ +GGIIS+VH TMY+ S
Sbjct: 5565118 QKLKNTPPISLLH*GTTL*IVLLNPTAIAIRFTIMMVIGGIISEVHFTMYKSANSSSISS 5564939
Query: 6 PP 1
PP
Sbjct: 5564938 PP 5564933
Score = 149 bits (320), Expect = 8e-035
Identities = 56/102 (54%), Positives = 73/102 (71%)
Frame = +2 / -2
Query: 11 DVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWV 190
D D +F +LY+ KWT+L+IPP +++VNL+G+ G S I S W L G +FF+FWV
Sbjct: 1530761 DEDGDFAELYLFKWTTLLIPPTTLLIVNLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWV 1530582
Query: 191 LAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
+ HLYPF KGLMGR+ RTPTIV VW+ LL+ SLLWV I+P
Sbjct: 1530581 IVHLYPFLKGLMGRQNRTPTIVVVWSVLLASIFSLLWVRIDP 1530456
Score = 148 bits (317), Expect = 2e-034
Identities = 53/100 (53%), Positives = 72/100 (72%)
Frame = +2 / -2
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
DD+F +LY KWT+L+IPP ++++N++G+ G S I + W L G +FFSFWV+
Sbjct: 5737214 DDDFGELYAFKWTTLLIPPTTVLIINIVGVVAGISDAINNGYQSWGPLFGKLFFSFWVIV 5737035
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGLMGR+ RTPTIV +W+ LL+ SLLWV I+P
Sbjct: 5737034 HLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDP 5736915
Score = 146 bits (314), Expect = 5e-034
Identities = 54/105 (51%), Positives = 74/105 (70%)
Frame = +2 / +3
Query: 2 GGDDVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFS 181
G D DEF DLY+ KWT+L+IPP ++++N++G+ G S I + W L G +FF+
Sbjct: 17736423 GASDEADEFGDLYLFKWTTLLIPPTTLIILNMVGVVAGVSDAINNGYGSWGPLFGKLFFA 17736602
Query: 182 FWVLAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
FWV+ HLYPF KGLMGR+ RTPTIV +W+ LL+ SL+WV I+P
Sbjct: 17736603 FWVIVHLYPFLKGLMGRQNRTPTIVVLWSILLASIFSLVWVRIDP 17736737
Score = 144 bits (310), Expect = 2e-033
Identities = 52/100 (52%), Positives = 73/100 (73%)
Frame = +2 / +3
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
D EF +LYI KWTSL+IPP ++++N+IG+ VG S I + W L G +FF+FWV+
Sbjct: 3077622 DGEFSELYIFKWTSLLIPPTTLLIINVIGVIVGISDAISNGYDSWGPLFGRLFFAFWVIL 3077801
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGL+G++ R PTI+ VW+ LL+ ++LLWV +NP
Sbjct: 3077802 HLYPFLKGLLGKQDRMPTIILVWSILLASILTLLWVRVNP 3077921
Score = 143 bits (306), Expect = 6e-033
Identities = 51/100 (51%), Positives = 73/100 (73%)
Frame = +2 / +3
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
D EF DLY+ KWTSL+IPP+ ++++N+IG+ VG S I + W L G +FF+ WV+
Sbjct: 25903206 DGEFSDLYLFKWTSLLIPPMTLLIINVIGVIVGVSDAISNGYDSWGPLFGRLFFALWVII 25903385
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGL+G++ R PTI+ VW+ LL+ ++LLWV +NP
Sbjct: 25903386 HLYPFLKGLLGKQDRMPTIIVVWSILLASILTLLWVRVNP 25903505
>gb|AV542787.1|AV542787 AV542787 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ19d08F 3', mRNA sequence
Length = 472
Score = 248 bits (535), Expect = 2e-064
Identities = 97/119 (81%), Positives = 111/119 (93%)
Frame = +2 / -1
Query: 5 GDDVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSF 184
GDD+DDE DLY+VKWTSLMI PI I+MVNLI IAVGFSRTIYS +PQWSKL+GGVFFSF
Sbjct: 472 GDDIDDESADLYMVKWTSLMIRPITIIMVNLIAIAVGFSRTIYSVVPQWSKLIGGVFFSF 293
Query: 185 WVLAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINPPSQNQQIGGSFTFP* 361
WVLAHLYPFAKGLMGRRGRTPTIV+VW+GL++ITIS+LWVAINPP+ N +IGG+F+FP*
Sbjct: 292 WVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVAITISILWVAINPPAGNTEIGGNFSFP* 116
Score = 161 bits (347), Expect = 1e-038
Identities = 72/111 (64%), Positives = 83/111 (74%)
Frame = -3 / +3
Query: 366 SFHGNVNDPPICWFWDGGLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCAST 187
++HG + PPI GGLMAT EMVM RP QT T+VGV PL PIRPLANG RCA T
Sbjct: 111 TYHGKLKFPPISVLPAGGLMATQRIEMVMATRPDQTYTIVGVLPLLPIRPLANG*RCAKT 290
Query: 186 QKLKKTPPSSLLHCGISL*MVRLNPTAMPIRFTIMITMGGIISDVHLTMYR 34
QKLK TPP SLLH G +L*+V LNPTA+ IRFTIM+ +G IIS+VH TMY+
Sbjct: 291 QKLKNTPPISLLH*GTTL*IVLLNPTAIAIRFTIMMVIGRIISEVHFTMYK 443
>gb|AV546912.1|AV546912 AV546912 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZL21f11F 3', mRNA sequence
Length = 570
Score = 217 bits (469), Expect = 2e-055
Identities = 88/100 (88%), Positives = 95/100 (95%)
Frame = +2 / -2
Query: 62 MIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGR 241
MIPPI IMMVNLI IAVGFSRTIYS IPQWSKL+GGVFFSFWVLAHLYPFAKGLMGRRGR
Sbjct: 569 MIPPITIMMVNLIAIAVGFSRTIYSVIPQWSKLIGGVFFSFWVLAHLYPFAKGLMGRRGR 390
Query: 242 TPTIVFVWAGLLSITISLLWVAINPPSQNQQIGGSFTFP* 361
TPTIV+VW+GL++ITISLLWVAINPP+ + QIGGSFTFP*
Sbjct: 389 TPTIVYVWSGLVAITISLLWVAINPPAGSTQIGGSFTFP* 270
Score = 137 bits (294), Expect(2) = 6e-032
Identities = 62/86 (72%), Positives = 68/86 (79%)
Frame = -3 / +1
Query: 318 GGLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCASTQKLKKTPPSSLLHCGI 139
GGLMAT S +MVM P QT TMVGV PL PI PLANG R ASTQKLK TPP +LLHCGI
Sbjct: 313 GGLMATQSRDMVMATSPDQTYTMVGVLPLLPISPLANG*R*ASTQKLKNTPPINLLHCGI 492
Query: 138 SL*MVRLNPTAMPIRFTIMITMGGII 61
+L +V LNPTAM IRFTIMI +GGI+
Sbjct: 493 TLYIVLLNPTAMAIRFTIMIVIGGIM 570
Score = 22.1 bits (42), Expect(2) = 6e-032
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -3 / +1
Query: 360 HGNVNDPPI 334
HG V DPPI
Sbjct: 271 HGKVKDPPI 297
>gb|AV548317.1|AV548317 AV548317 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZL51f07F 3', mRNA sequence
Length = 557
Score = 217 bits (469), Expect = 2e-055
Identities = 88/100 (88%), Positives = 95/100 (95%)
Frame = +2 / -2
Query: 62 MIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGR 241
MIPPI IMMVNLI IAVGFSRTIYS IPQWSKL+GGVFFSFWVLAHLYPFAKGLMGRRGR
Sbjct: 556 MIPPITIMMVNLIAIAVGFSRTIYSVIPQWSKLIGGVFFSFWVLAHLYPFAKGLMGRRGR 377
Query: 242 TPTIVFVWAGLLSITISLLWVAINPPSQNQQIGGSFTFP* 361
TPTIV+VW+GL++ITISLLWVAINPP+ + QIGGSFTFP*
Sbjct: 376 TPTIVYVWSGLVAITISLLWVAINPPAGSTQIGGSFTFP* 257
Score = 137 bits (294), Expect(2) = 6e-032
Identities = 62/86 (72%), Positives = 68/86 (79%)
Frame = -3 / +3
Query: 318 GGLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCASTQKLKKTPPSSLLHCGI 139
GGLMAT S +MVM P QT TMVGV PL PI PLANG R ASTQKLK TPP +LLHCGI
Sbjct: 300 GGLMATQSRDMVMATSPDQTYTMVGVLPLLPISPLANG*R*ASTQKLKNTPPINLLHCGI 479
Query: 138 SL*MVRLNPTAMPIRFTIMITMGGII 61
+L +V LNPTAM IRFTIMI +GGI+
Sbjct: 480 TLYIVLLNPTAMAIRFTIMIVIGGIM 557
Score = 22.1 bits (42), Expect(2) = 6e-032
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -3 / +3
Query: 360 HGNVNDPPI 334
HG V DPPI
Sbjct: 258 HGKVKDPPI 284
>gb|AV548647.1|AV548647 AV548647 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZL58g10F 3', mRNA sequence
Length = 563
Score = 217 bits (469), Expect = 2e-055
Identities = 88/100 (88%), Positives = 95/100 (95%)
Frame = +2 / -2
Query: 62 MIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGR 241
MIPPI IMMVNLI IAVGFSRTIYS IPQWSKL+GGVFFSFWVLAHLYPFAKGLMGRRGR
Sbjct: 562 MIPPITIMMVNLIAIAVGFSRTIYSVIPQWSKLIGGVFFSFWVLAHLYPFAKGLMGRRGR 383
Query: 242 TPTIVFVWAGLLSITISLLWVAINPPSQNQQIGGSFTFP* 361
TPTIV+VW+GL++ITISLLWVAINPP+ + QIGGSFTFP*
Sbjct: 382 TPTIVYVWSGLVAITISLLWVAINPPAGSTQIGGSFTFP* 263
Score = 137 bits (294), Expect(2) = 6e-032
Identities = 62/86 (72%), Positives = 68/86 (79%)
Frame = -3 / +3
Query: 318 GGLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCASTQKLKKTPPSSLLHCGI 139
GGLMAT S +MVM P QT TMVGV PL PI PLANG R ASTQKLK TPP +LLHCGI
Sbjct: 306 GGLMATQSRDMVMATSPDQTYTMVGVLPLLPISPLANG*R*ASTQKLKNTPPINLLHCGI 485
Query: 138 SL*MVRLNPTAMPIRFTIMITMGGII 61
+L +V LNPTAM IRFTIMI +GGI+
Sbjct: 486 TLYIVLLNPTAMAIRFTIMIVIGGIM 563
Score = 22.1 bits (42), Expect(2) = 6e-032
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -3 / +3
Query: 360 HGNVNDPPI 334
HG V DPPI
Sbjct: 264 HGKVKDPPI 290
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 215 bits (465), Expect = 7e-055
Identities = 83/108 (76%), Positives = 94/108 (87%)
Frame = +2 / -2
Query: 8 DDVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFW 187
+D DDEF DLY+VKW+ LM+PP+ IMMVN+I IAVG +RT+YS PQWSKL+GGVFFSFW
Sbjct: 595106 EDGDDEFADLYVVKWSFLMVPPLTIMMVNMIAIAVGLARTLYSPFPQWSKLVGGVFFSFW 594927
Query: 188 VLAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINPPSQNQ 331
VL HLYPFAKGLMGRRGR PTIVFVW+GLLSI +SLLWV INPPS Q
Sbjct: 594926 VLCHLYPFAKGLMGRRGRVPTIVFVWSGLLSIIVSLLWVYINPPSGKQ 594783
Score = 175 bits (377), Expect = 1e-042
Identities = 63/103 (61%), Positives = 84/103 (81%)
Frame = +2 / -3
Query: 2 GGDDVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFS 181
GGDD DDEF DLY+ KWT+LMIPP+ I+++N++ I RT++S PQWS LLGG FF+
Sbjct: 11595646 GGDDEDDEFADLYLFKWTALMIPPLTIIILNIVAILFAVCRTVFSANPQWSNLLGGTFFA 11595467
Query: 182 FWVLAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAI 310
WVL H+YPFAKGLMGR G+TPT+V+VW+GL++I +SLL++ I
Sbjct: 11595466 SWVLLHMYPFAKGLMGRGGKTPTVVYVWSGLIAICLSLLYITI 11595338
Score = 129 bits (277), Expect = 6e-029
Identities = 56/98 (57%), Positives = 68/98 (69%)
Frame = -3 / +1
Query: 327 FWDGGLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCASTQKLKKTPPSSLLH 148
F +GGL+ T S++ +++ +P T TMVG PL PI PLANGYR STQKLK TPP+SLLH
Sbjct: 594787 FPEGGLI*TQSNDTIIDNKPDHTNTMVGTLPLLPINPLANGYR*QSTQKLKNTPPTSLLH 594966
Query: 147 CGISL*MVRLNPTAMPIRFTIMITMGGIISDVHLTMYR 34
CG L V +PTA+ I FTIMI GG I +H T YR
Sbjct: 594967 CGNGLYRVLASPTAIAIIFTIMIVNGGTIKKLHFTTYR 595080
>gb|AC009525.3| Arabidopsis thaliana chromosome I BAC F22D16 genomic sequence, complete
sequence
Length = 100239
Score = 215 bits (465), Expect = 7e-055
Identities = 83/108 (76%), Positives = 94/108 (87%)
Frame = +2 / +2
Query: 8 DDVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFW 187
+D DDEF DLY+VKW+ LM+PP+ IMMVN+I IAVG +RT+YS PQWSKL+GGVFFSFW
Sbjct: 97430 EDGDDEFADLYVVKWSFLMVPPLTIMMVNMIAIAVGLARTLYSPFPQWSKLVGGVFFSFW 97609
Query: 188 VLAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINPPSQNQ 331
VL HLYPFAKGLMGRRGR PTIVFVW+GLLSI +SLLWV INPPS Q
Sbjct: 97610 VLCHLYPFAKGLMGRRGRVPTIVFVWSGLLSIIVSLLWVYINPPSGKQ 97753
Score = 129 bits (277), Expect = 6e-029
Identities = 56/98 (57%), Positives = 68/98 (69%)
Frame = -3 / -1
Query: 327 FWDGGLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCASTQKLKKTPPSSLLH 148
F +GGL+ T S++ +++ +P T TMVG PL PI PLANGYR STQKLK TPP+SLLH
Sbjct: 97749 FPEGGLI*TQSNDTIIDNKPDHTNTMVGTLPLLPINPLANGYR*QSTQKLKNTPPTSLLH 97570
Query: 147 CGISL*MVRLNPTAMPIRFTIMITMGGIISDVHLTMYR 34
CG L V +PTA+ I FTIMI GG I +H T YR
Sbjct: 97569 CGNGLYRVLASPTAIAIIFTIMIVNGGTIKKLHFTTYR 97456
>gb|AC022521.4|AC022521 Arabidopsis thaliana chromosome I BAC T14P4 genomic sequence, complete
sequence
Length = 121668
Score = 215 bits (465), Expect = 7e-055
Identities = 83/108 (76%), Positives = 94/108 (87%)
Frame = +2 / +3
Query: 8 DDVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFW 187
+D DDEF DLY+VKW+ LM+PP+ IMMVN+I IAVG +RT+YS PQWSKL+GGVFFSFW
Sbjct: 22791 EDGDDEFADLYVVKWSFLMVPPLTIMMVNMIAIAVGLARTLYSPFPQWSKLVGGVFFSFW 22970
Query: 188 VLAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINPPSQNQ 331
VL HLYPFAKGLMGRRGR PTIVFVW+GLLSI +SLLWV INPPS Q
Sbjct: 22971 VLCHLYPFAKGLMGRRGRVPTIVFVWSGLLSIIVSLLWVYINPPSGKQ 23114
Score = 129 bits (277), Expect = 6e-029
Identities = 56/98 (57%), Positives = 68/98 (69%)
Frame = -3 / -3
Query: 327 FWDGGLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCASTQKLKKTPPSSLLH 148
F +GGL+ T S++ +++ +P T TMVG PL PI PLANGYR STQKLK TPP+SLLH
Sbjct: 23110 FPEGGLI*TQSNDTIIDNKPDHTNTMVGTLPLLPINPLANGYR*QSTQKLKNTPPTSLLH 22931
Query: 147 CGISL*MVRLNPTAMPIRFTIMITMGGIISDVHLTMYR 34
CG L V +PTA+ I FTIMI GG I +H T YR
Sbjct: 22930 CGNGLYRVLASPTAIAIIFTIMIVNGGTIKKLHFTTYR 22817
>ref|NM_100153.2| Arabidopsis thaliana ATCSLD5; cellulose synthase AT1G02730 (ATCSLD5)
mRNA, complete cds
Length = 3837
Score = 215 bits (465), Expect = 7e-055
Identities = 83/108 (76%), Positives = 94/108 (87%)
Frame = +2 / +2
Query: 8 DDVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFW 187
+D DDEF DLY+VKW+ LM+PP+ IMMVN+I IAVG +RT+YS PQWSKL+GGVFFSFW
Sbjct: 3380 EDGDDEFADLYVVKWSFLMVPPLTIMMVNMIAIAVGLARTLYSPFPQWSKLVGGVFFSFW 3559
Query: 188 VLAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINPPSQNQ 331
VL HLYPFAKGLMGRRGR PTIVFVW+GLLSI +SLLWV INPPS Q
Sbjct: 3560 VLCHLYPFAKGLMGRRGRVPTIVFVWSGLLSIIVSLLWVYINPPSGKQ 3703
Score = 129 bits (277), Expect = 6e-029
Identities = 56/98 (57%), Positives = 68/98 (69%)
Frame = -3 / -1
Query: 327 FWDGGLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCASTQKLKKTPPSSLLH 148
F +GGL+ T S++ +++ +P T TMVG PL PI PLANGYR STQKLK TPP+SLLH
Sbjct: 3699 FPEGGLI*TQSNDTIIDNKPDHTNTMVGTLPLLPINPLANGYR*QSTQKLKNTPPTSLLH 3520
Query: 147 CGISL*MVRLNPTAMPIRFTIMITMGGIISDVHLTMYR 34
CG L V +PTA+ I FTIMI GG I +H T YR
Sbjct: 3519 CGNGLYRVLASPTAIAIIFTIMIVNGGTIKKLHFTTYR 3406
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 215 bits (465), Expect = 7e-055
Identities = 83/108 (76%), Positives = 94/108 (87%)
Frame = +2 / -3
Query: 8 DDVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFW 187
+D DDEF DLY+VKW+ LM+PP+ IMMVN+I IAVG +RT+YS PQWSKL+GGVFFSFW
Sbjct: 595047 EDGDDEFADLYVVKWSFLMVPPLTIMMVNMIAIAVGLARTLYSPFPQWSKLVGGVFFSFW 594868
Query: 188 VLAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINPPSQNQ 331
VL HLYPFAKGLMGRRGR PTIVFVW+GLLSI +SLLWV INPPS Q
Sbjct: 594867 VLCHLYPFAKGLMGRRGRVPTIVFVWSGLLSIIVSLLWVYINPPSGKQ 594724
Score = 175 bits (377), Expect = 1e-042
Identities = 63/103 (61%), Positives = 84/103 (81%)
Frame = +2 / -3
Query: 2 GGDDVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFS 181
GGDD DDEF DLY+ KWT+LMIPP+ I+++N++ I RT++S PQWS LLGG FF+
Sbjct: 11586846 GGDDEDDEFADLYLFKWTALMIPPLTIIILNIVAILFAVCRTVFSANPQWSNLLGGTFFA 11586667
Query: 182 FWVLAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAI 310
WVL H+YPFAKGLMGR G+TPT+V+VW+GL++I +SLL++ I
Sbjct: 11586666 SWVLLHMYPFAKGLMGRGGKTPTVVYVWSGLIAICLSLLYITI 11586538
Score = 129 bits (277), Expect = 6e-029
Identities = 56/98 (57%), Positives = 68/98 (69%)
Frame = -3 / +2
Query: 327 FWDGGLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCASTQKLKKTPPSSLLH 148
F +GGL+ T S++ +++ +P T TMVG PL PI PLANGYR STQKLK TPP+SLLH
Sbjct: 594728 FPEGGLI*TQSNDTIIDNKPDHTNTMVGTLPLLPINPLANGYR*QSTQKLKNTPPTSLLH 594907
Query: 147 CGISL*MVRLNPTAMPIRFTIMITMGGIISDVHLTMYR 34
CG L V +PTA+ I FTIMI GG I +H T YR
Sbjct: 594908 CGNGLYRVLASPTAIAIIFTIMIVNGGTIKKLHFTTYR 595021
>gb|AI998478.1|AI998478 701545861 A. thaliana, Columbia Col-0, rosette-2 Arabidopsis
thaliana cDNA clone 701545861, mRNA sequence
Length = 599
Score = 188 bits (404), Expect(3) = 9e-055
Identities = 73/86 (84%), Positives = 83/86 (96%)
Frame = +2 / -1
Query: 104 IAVGFSRTIYSEIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWAGLLSI 283
IAVGFSRTIYS +PQWSKL+GGVFFSFWVLAHLYPFAKGLMGRRGRTPTIV+VW+GL++I
Sbjct: 482 IAVGFSRTIYSVVPQWSKLIGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVAI 303
Query: 284 TISLLWVAINPPSQNQQIGGSFTFP* 361
TISLLWVAINPP+ N +IGG+F+FP*
Sbjct: 302 TISLLWVAINPPAGNTEIGGNFSFP* 225
Score = 126 bits (269), Expect(2) = 4e-031
Identities = 57/88 (64%), Positives = 64/88 (72%)
Frame = -3 / +1
Query: 366 SFHGNVNDPPICWFWDGGLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCAST 187
++HG + PPI GGLMAT EMVM RP QT T+VGV PL PIRPLANG RCA T
Sbjct: 220 TYHGKLKFPPISVLPAGGLMATQRREMVMATRPDQTYTIVGVLPLLPIRPLANG*RCAKT 399
Query: 186 QKLKKTPPSSLLHCGISL*MVRLNPTAM 103
QKLK TPP SLLH G +L*+V LNPTA+
Sbjct: 400 QKLKNTPPISLLH*GTTL*IVLLNPTAI 483
Score = 34.1 bits (68), Expect(3) = 9e-055
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +2 / -2
Query: 53 TSLMIPPIVIMMVNLI 100
TSLMIPPI I+MVNLI
Sbjct: 532 TSLMIPPITIIMVNLI 485
Score = 32.7 bits (65), Expect(3) = 9e-055
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +2 / -1
Query: 2 GGDDVDDEFXDLYIV 46
GGDD+ DEF DLY+V
Sbjct: 581 GGDDIXDEFADLYMV 537
Score = 30.9 bits (61), Expect(2) = 4e-031
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = -3 / +3
Query: 99 IRFTIMITMGGIISDV 52
IRFTIM+ +GGIIS+V
Sbjct: 486 IRFTIMMVIGGIISEV 533
>gb|BT005743.1| Arabidopsis thaliana clone RAFL15-50-B21 (R50044) unknown protein
(At4g38190) mRNA, partial cds
Length = 3414
Score = 215 bits (464), Expect = 1e-054
Identities = 84/105 (80%), Positives = 93/105 (88%)
Frame = +2 / +3
Query: 2 GGDDVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFS 181
GGDD +D + DLYIVKW+SLMIPPIVI MVN+I I V F RTIY +PQWSKL+GG FFS
Sbjct: 2847 GGDDNEDIYADLYIVKWSSLMIPPIVIAMVNIIAIVVAFIRTIYQAVPQWSKLIGGAFFS 3026
Query: 182 FWVLAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
FWVLAHLYPFAKGLMGRRG+TPTIVFVWAGL++ITISLLW AINP
Sbjct: 3027 FWVLAHLYPFAKGLMGRRGKTPTIVFVWAGLIAITISLLWTAINP 3161
Score = 156 bits (336), Expect = 5e-037
Identities = 66/105 (62%), Positives = 74/105 (70%)
Frame = -3 / -3
Query: 315 GLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCASTQKLKKTPPSSLLHCGIS 136
G MA HS EMVM RPA TKTMVGV PLRPI P ANGY+CA+TQKLK PP SLLHCG +
Sbjct: 3160 GFMAVHSREMVMAMRPAHTKTMVGVLPLRPINPFANGYKCANTQKLKNAPPISLLHCGTA 2981
Query: 135 L*MVRLNPTAMPIRFTIMITMGGIISDVHLTMYRXXXXXXXXSPP 1
+V +N T + I FTI IT+GGIISD H TMY+ SPP
Sbjct: 2980 WYIVLMNATTIAIMFTIAITIGGIISDDHFTMYKSAYMSSLSSPP 2846
>emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long arm
Length = 14497843
Score = 215 bits (464), Expect = 1e-054
Identities = 84/105 (80%), Positives = 93/105 (88%)
Frame = +2 / -2
Query: 2 GGDDVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFS 181
GGDD +D + DLYIVKW+SLMIPPIVI MVN+I I V F RTIY +PQWSKL+GG FFS
Sbjct: 13823259 GGDDNEDIYADLYIVKWSSLMIPPIVIAMVNIIAIVVAFIRTIYQAVPQWSKLIGGAFFS 13823080
Query: 182 FWVLAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
FWVLAHLYPFAKGLMGRRG+TPTIVFVWAGL++ITISLLW AINP
Sbjct: 13823079 FWVLAHLYPFAKGLMGRRGKTPTIVFVWAGLIAITISLLWTAINP 13822945
Score = 156 bits (336), Expect = 5e-037
Identities = 66/105 (62%), Positives = 74/105 (70%)
Frame = -3 / +2
Query: 315 GLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCASTQKLKKTPPSSLLHCGIS 136
G MA HS EMVM RPA TKTMVGV PLRPI P ANGY+CA+TQKLK PP SLLHCG +
Sbjct: 13822946 GFMAVHSREMVMAMRPAHTKTMVGVLPLRPINPFANGYKCANTQKLKNAPPISLLHCGTA 13823125
Query: 135 L*MVRLNPTAMPIRFTIMITMGGIISDVHLTMYRXXXXXXXXSPP 1
+V +N T + I FTI IT+GGIISD H TMY+ SPP
Sbjct: 13823126 WYIVLMNATTIAIMFTIAITIGGIISDDHFTMYKSAYMSSLSSPP 13823260
Score = 152 bits (326), Expect = 1e-035
Identities = 58/102 (56%), Positives = 73/102 (71%)
Frame = +2 / -2
Query: 11 DVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWV 190
D D +F +LYI KWT+L+IPP +++VNLIGI G S + S W L G +FF+ WV
Sbjct: 11554152 DEDGDFAELYIFKWTALLIPPTTVLLVNLIGIVAGVSYAVNSGYQSWGPLFGKLFFALWV 11553973
Query: 191 LAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
+AHLYPF KGL+GR+ RTPTIV VW+ LL+ SLLWV INP
Sbjct: 11553972 IAHLYPFLKGLLGRQNRTPTIVIVWSVLLASIFSLLWVRINP 11553847
Score = 149 bits (321), Expect = 5e-035
Identities = 56/100 (56%), Positives = 73/100 (73%)
Frame = +2 / -1
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
D EF +LYIVKWT+L+IPP ++++NL+G+ GFS + W L G VFF+FWV+
Sbjct: 6225961 DLEFGELYIVKWTTLLIPPTSLLIINLVGVVAGFSDALNKGYEAWGPLFGKVFFAFWVIL 6225782
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGLMGR+ RTPTIV +W+ LL+ SL+WV INP
Sbjct: 6225781 HLYPFLKGLMGRQNRTPTIVILWSILLASVFSLVWVRINP 6225662
Score = 135 bits (290), Expect = 1e-030
Identities = 47/100 (47%), Positives = 71/100 (71%)
Frame = +2 / +1
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
D F +LYI KWT+L+IPP ++++N+IG+ VG S I + W L G +FF+ WV+
Sbjct: 14214328 DGAFSELYIFKWTTLLIPPTTLLIINIIGVIVGVSDAISNGYDSWGPLFGRLFFALWVIV 14214507
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KG++G++ + PTI+ VW+ LL+ ++LLWV +NP
Sbjct: 14214508 HLYPFLKGMLGKQDKMPTIIVVWSILLASILTLLWVRVNP 14214627
>emb|AL035538.1|ATF20D10 Arabidopsis thaliana DNA chromosome 4, BAC clone F20D10 (ESSA project)
Length = 147215
Score = 215 bits (464), Expect = 1e-054
Identities = 84/105 (80%), Positives = 93/105 (88%)
Frame = +2 / -2
Query: 2 GGDDVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFS 181
GGDD +D + DLYIVKW+SLMIPPIVI MVN+I I V F RTIY +PQWSKL+GG FFS
Sbjct: 98488 GGDDNEDIYADLYIVKWSSLMIPPIVIAMVNIIAIVVAFIRTIYQAVPQWSKLIGGAFFS 98309
Query: 182 FWVLAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
FWVLAHLYPFAKGLMGRRG+TPTIVFVWAGL++ITISLLW AINP
Sbjct: 98308 FWVLAHLYPFAKGLMGRRGKTPTIVFVWAGLIAITISLLWTAINP 98174
Score = 156 bits (336), Expect = 5e-037
Identities = 66/105 (62%), Positives = 74/105 (70%)
Frame = -3 / +3
Query: 315 GLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCASTQKLKKTPPSSLLHCGIS 136
G MA HS EMVM RPA TKTMVGV PLRPI P ANGY+CA+TQKLK PP SLLHCG +
Sbjct: 98175 GFMAVHSREMVMAMRPAHTKTMVGVLPLRPINPFANGYKCANTQKLKNAPPISLLHCGTA 98354
Query: 135 L*MVRLNPTAMPIRFTIMITMGGIISDVHLTMYRXXXXXXXXSPP 1
+V +N T + I FTI IT+GGIISD H TMY+ SPP
Sbjct: 98355 WYIVLMNATTIAIMFTIAITIGGIISDDHFTMYKSAYMSSLSSPP 98489
>emb|AL161593.2|ATCHRIV89 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 89
Length = 199789
Score = 215 bits (464), Expect = 1e-054
Identities = 84/105 (80%), Positives = 93/105 (88%)
Frame = +2 / -2
Query: 2 GGDDVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFS 181
GGDD +D + DLYIVKW+SLMIPPIVI MVN+I I V F RTIY +PQWSKL+GG FFS
Sbjct: 19410 GGDDNEDIYADLYIVKWSSLMIPPIVIAMVNIIAIVVAFIRTIYQAVPQWSKLIGGAFFS 19231
Query: 182 FWVLAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
FWVLAHLYPFAKGLMGRRG+TPTIVFVWAGL++ITISLLW AINP
Sbjct: 19230 FWVLAHLYPFAKGLMGRRGKTPTIVFVWAGLIAITISLLWTAINP 19096
Score = 156 bits (336), Expect = 5e-037
Identities = 66/105 (62%), Positives = 74/105 (70%)
Frame = -3 / +2
Query: 315 GLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCASTQKLKKTPPSSLLHCGIS 136
G MA HS EMVM RPA TKTMVGV PLRPI P ANGY+CA+TQKLK PP SLLHCG +
Sbjct: 19097 GFMAVHSREMVMAMRPAHTKTMVGVLPLRPINPFANGYKCANTQKLKNAPPISLLHCGTA 19276
Query: 135 L*MVRLNPTAMPIRFTIMITMGGIISDVHLTMYRXXXXXXXXSPP 1
+V +N T + I FTI IT+GGIISD H TMY+ SPP
Sbjct: 19277 WYIVLMNATTIAIMFTIAITIGGIISDDHFTMYKSAYMSSLSSPP 19411
>ref|NM_119980.2| Arabidopsis thaliana ATCSLD4; cellulose synthase/ transferase,
transferring glycosyl groups AT4G38190 (ATCSLD4) mRNA,
complete cds
Length = 3513
Score = 215 bits (464), Expect = 1e-054
Identities = 84/105 (80%), Positives = 93/105 (88%)
Frame = +2 / +1
Query: 2 GGDDVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFS 181
GGDD +D + DLYIVKW+SLMIPPIVI MVN+I I V F RTIY +PQWSKL+GG FFS
Sbjct: 2962 GGDDNEDIYADLYIVKWSSLMIPPIVIAMVNIIAIVVAFIRTIYQAVPQWSKLIGGAFFS 3141
Query: 182 FWVLAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
FWVLAHLYPFAKGLMGRRG+TPTIVFVWAGL++ITISLLW AINP
Sbjct: 3142 FWVLAHLYPFAKGLMGRRGKTPTIVFVWAGLIAITISLLWTAINP 3276
Score = 156 bits (336), Expect = 5e-037
Identities = 66/105 (62%), Positives = 74/105 (70%)
Frame = -3 / -2
Query: 315 GLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCASTQKLKKTPPSSLLHCGIS 136
G MA HS EMVM RPA TKTMVGV PLRPI P ANGY+CA+TQKLK PP SLLHCG +
Sbjct: 3275 GFMAVHSREMVMAMRPAHTKTMVGVLPLRPINPFANGYKCANTQKLKNAPPISLLHCGTA 3096
Query: 135 L*MVRLNPTAMPIRFTIMITMGGIISDVHLTMYRXXXXXXXXSPP 1
+V +N T + I FTI IT+GGIISD H TMY+ SPP
Sbjct: 3095 WYIVLMNATTIAIMFTIAITIGGIISDDHFTMYKSAYMSSLSSPP 2961
>ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complete sequence
Length = 18585042
Score = 215 bits (464), Expect = 1e-054
Identities = 84/105 (80%), Positives = 93/105 (88%)
Frame = +2 / -2
Query: 2 GGDDVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFS 181
GGDD +D + DLYIVKW+SLMIPPIVI MVN+I I V F RTIY +PQWSKL+GG FFS
Sbjct: 17910464 GGDDNEDIYADLYIVKWSSLMIPPIVIAMVNIIAIVVAFIRTIYQAVPQWSKLIGGAFFS 17910285
Query: 182 FWVLAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
FWVLAHLYPFAKGLMGRRG+TPTIVFVWAGL++ITISLLW AINP
Sbjct: 17910284 FWVLAHLYPFAKGLMGRRGKTPTIVFVWAGLIAITISLLWTAINP 17910150
Score = 156 bits (336), Expect = 5e-037
Identities = 66/105 (62%), Positives = 74/105 (70%)
Frame = -3 / +1
Query: 315 GLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCASTQKLKKTPPSSLLHCGIS 136
G MA HS EMVM RPA TKTMVGV PLRPI P ANGY+CA+TQKLK PP SLLHCG +
Sbjct: 17910151 GFMAVHSREMVMAMRPAHTKTMVGVLPLRPINPFANGYKCANTQKLKNAPPISLLHCGTA 17910330
Query: 135 L*MVRLNPTAMPIRFTIMITMGGIISDVHLTMYRXXXXXXXXSPP 1
+V +N T + I FTI IT+GGIISD H TMY+ SPP
Sbjct: 17910331 WYIVLMNATTIAIMFTIAITIGGIISDDHFTMYKSAYMSSLSSPP 17910465
Score = 152 bits (326), Expect = 1e-035
Identities = 58/102 (56%), Positives = 73/102 (71%)
Frame = +2 / -3
Query: 11 DVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWV 190
D D +F +LYI KWT+L+IPP +++VNLIGI G S + S W L G +FF+ WV
Sbjct: 15641377 DEDGDFAELYIFKWTALLIPPTTVLLVNLIGIVAGVSYAVNSGYQSWGPLFGKLFFALWV 15641198
Query: 191 LAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
+AHLYPF KGL+GR+ RTPTIV VW+ LL+ SLLWV INP
Sbjct: 15641197 IAHLYPFLKGLLGRQNRTPTIVIVWSVLLASIFSLLWVRINP 15641072
Score = 149 bits (321), Expect = 5e-035
Identities = 56/100 (56%), Positives = 73/100 (73%)
Frame = +2 / -2
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
D EF +LYIVKWT+L+IPP ++++NL+G+ GFS + W L G VFF+FWV+
Sbjct: 10313216 DLEFGELYIVKWTTLLIPPTSLLIINLVGVVAGFSDALNKGYEAWGPLFGKVFFAFWVIL 10313037
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGLMGR+ RTPTIV +W+ LL+ SL+WV INP
Sbjct: 10313036 HLYPFLKGLMGRQNRTPTIVILWSILLASVFSLVWVRINP 10312917
Score = 135 bits (290), Expect = 1e-030
Identities = 47/100 (47%), Positives = 71/100 (71%)
Frame = +2 / +1
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
D F +LYI KWT+L+IPP ++++N+IG+ VG S I + W L G +FF+ WV+
Sbjct: 18301528 DGAFSELYIFKWTTLLIPPTTLLIINIIGVIVGVSDAISNGYDSWGPLFGRLFFALWVIV 18301707
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KG++G++ + PTI+ VW+ LL+ ++LLWV +NP
Sbjct: 18301708 HLYPFLKGMLGKQDKMPTIIVVWSILLASILTLLWVRVNP 18301827
>emb|BX818076.1|CNS0ACOJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL5ZC03 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 551
Score = 215 bits (463), Expect = 1e-054
Identities = 83/108 (76%), Positives = 93/108 (86%)
Frame = +2 / +2
Query: 8 DDVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFW 187
+D DDEF DLY+VKW+ LM+PP IMMVN+I IAVG +RT+YS PQWSKL+GGVFFSFW
Sbjct: 77 EDGDDEFADLYVVKWSFLMVPPFTIMMVNIIAIAVGLARTLYSPFPQWSKLVGGVFFSFW 256
Query: 188 VLAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINPPSQNQ 331
VL HLYPFAKGLMGRRGR PTIVFVW+GLLSI +SLLWV INPPS Q
Sbjct: 257 VLCHLYPFAKGLMGRRGRVPTIVFVWSGLLSIIVSLLWVYINPPSGKQ 400
Score = 128 bits (274), Expect = 2e-028
Identities = 55/98 (56%), Positives = 68/98 (69%)
Frame = -3 / -3
Query: 327 FWDGGLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCASTQKLKKTPPSSLLH 148
F +GGL+ T S++ +++ +P T TMVG PL PI PLANGYR STQKLK TPP+SLLH
Sbjct: 396 FPEGGLI*TQSNDTIIDNKPDHTNTMVGTLPLLPINPLANGYR*QSTQKLKNTPPTSLLH 217
Query: 147 CGISL*MVRLNPTAMPIRFTIMITMGGIISDVHLTMYR 34
CG L V +PTA+ + FTIMI GG I +H T YR
Sbjct: 216 CGNGLYRVLASPTAIAMIFTIMIVNGGTIKKLHFTTYR 103
>gb|CW802323.1|CW802323 WiscDsLox477-480I22 Arabidopsis thaliana T-DNA insertion flanking
sequences Arabidopsis thaliana genomic, DNA sequence
Length = 743
Score = 208 bits (448), Expect = 2e-052
Identities = 80/105 (76%), Positives = 90/105 (85%)
Frame = +2 / -1
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
DDEF DLY+VKW+ M+PP+ IMMVN+I IAVG +RT+YS PQWSKL+GGVFFSFWVL
Sbjct: 461 DDEFADLYVVKWSFXMVPPLTIMMVNMIAIAVGLARTLYSPFPQWSKLVGGVFFSFWVLC 282
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINPPSQNQ 331
HLYPFAKGLMGRRGR PTI FVW+GLLSI +SLLWV INPPS Q
Sbjct: 281 HLYPFAKGLMGRRGRVPTIGFVWSGLLSIIVSLLWVYINPPSGKQ 147
Score = 127 bits (271), Expect = 4e-028
Identities = 55/98 (56%), Positives = 67/98 (68%)
Frame = -3 / +1
Query: 327 FWDGGLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCASTQKLKKTPPSSLLH 148
F +GGL+ T S++ +++ +P T MVG PL PI PLANGYR STQKLK TPP+SLLH
Sbjct: 151 FPEGGLI*TQSNDTIIDNKPDHTNPMVGTLPLLPINPLANGYR*QSTQKLKNTPPTSLLH 330
Query: 147 CGISL*MVRLNPTAMPIRFTIMITMGGIISDVHLTMYR 34
CG L V +PTA+ I FTIMI GG I +H T YR
Sbjct: 331 CGNGLYRVLASPTAIAIIFTIMIVNGGTIXKLHFTTYR 444
>gb|AV798801.1|AV798801 AV798801 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-17-J15 3',
mRNA sequence
Length = 432
Score = 203 bits (437), Expect = 5e-051
Identities = 78/100 (78%), Positives = 88/100 (88%)
Frame = +2 / -3
Query: 32 DLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLAHLYPF 211
DLY+VKW+ LM+PP+ IMMVN+I IAVG +RT+YS PQWSKL+GGVFFSFWVL HLYPF
Sbjct: 427 DLYVVKWSFLMVPPLTIMMVNMIAIAVGLARTLYSPFPQWSKLVGGVFFSFWVLCHLYPF 248
Query: 212 AKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINPPSQNQ 331
AKGLMGRRGR PTIVFVW+GLLSI +SLLWV INPPS Q
Sbjct: 247 AKGLMGRRGRVPTIVFVWSGLLSIIVSLLWVYINPPSGKQ 128
Score = 132 bits (282), Expect = 1e-029
Identities = 57/98 (58%), Positives = 69/98 (70%)
Frame = -3 / +3
Query: 327 FWDGGLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCASTQKLKKTPPSSLLH 148
F +GGL+ T S++ +++ +P T TMVG PL PI PLANGYR STQKLK TPP+SLLH
Sbjct: 132 FPEGGLI*TQSNDTIIDNKPDHTNTMVGTLPLLPINPLANGYR*QSTQKLKNTPPTSLLH 311
Query: 147 CGISL*MVRLNPTAMPIRFTIMITMGGIISDVHLTMYR 34
CG L* V +PTA+ I FTIMI GG I +H T YR
Sbjct: 312 CGNGL*RVLASPTAIAIIFTIMIVNGGTIKKLHFTTYR 425
>gb|AC002334.3| Arabidopsis thaliana chromosome 2 clone F25I18 map TEn5, complete
sequence
Length = 93158
Score = 200 bits (431), Expect = 4e-050
Identities = 75/113 (66%), Positives = 91/113 (80%)
Frame = +2 / +1
Query: 5 GDDVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSF 184
G+D DD F DLYIVKWT L I P+ I++VNL+ I +G SRTIYS IPQW KL+GG+FFS
Sbjct: 63616 GEDEDDIFADLYIVKWTGLFIMPLTIIIVNLVAIVIGASRTIYSVIPQWGKLMGGIFFSL 63795
Query: 185 WVLAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINPPSQNQQIGG 343
WVL H+YPFAKGLMGRRG+ PTIV+VW+GL+SIT+SLLW+ I+PP GG
Sbjct: 63796 WVLTHMYPFAKGLMGRRGKVPTIVYVWSGLVSITVSLLWITISPPDDVSGSGG 63954
Score = 108 bits (230), Expect = 2e-022
Identities = 53/113 (46%), Positives = 63/113 (55%)
Frame = -3 / -1
Query: 342 PPICWFWDGGLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCASTQKLKKTPP 163
PP+ GGLM SSE V++ P QT T+VG PLRPI PLANGY T KLK PP
Sbjct: 63953 PPLPETSSGGLMVIQSSETVIDTSPDQT*TIVGTFPLRPINPLANGYI*VKTHKLKNIPP 63774
Query: 162 SSLLHCGISL*MVRLNPTAMPIRFTIMITMGGIISDVHLTMYRXXXXXXXXSP 4
+L HCGI+L +V P + R T+MI G + VH TM R SP
Sbjct: 63773 INLPHCGITLYIVLEAPITIATRLTMMIVSGMMNKPVHFTM*RSAKMSSSSSP 63615
>ref|NM_128870.3| Arabidopsis thaliana ATCSLD1; cellulose synthase/ transferase,
transferring glycosyl groups AT2G33100 (ATCSLD1) mRNA,
complete cds
Length = 3286
Score = 200 bits (431), Expect = 4e-050
Identities = 75/113 (66%), Positives = 91/113 (80%)
Frame = +2 / +1
Query: 5 GDDVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSF 184
G+D DD F DLYIVKWT L I P+ I++VNL+ I +G SRTIYS IPQW KL+GG+FFS
Sbjct: 2761 GEDEDDIFADLYIVKWTGLFIMPLTIIIVNLVAIVIGASRTIYSVIPQWGKLMGGIFFSL 2940
Query: 185 WVLAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINPPSQNQQIGG 343
WVL H+YPFAKGLMGRRG+ PTIV+VW+GL+SIT+SLLW+ I+PP GG
Sbjct: 2941 WVLTHMYPFAKGLMGRRGKVPTIVYVWSGLVSITVSLLWITISPPDDVSGSGG 3099
Score = 108 bits (230), Expect = 2e-022
Identities = 53/113 (46%), Positives = 63/113 (55%)
Frame = -3 / -3
Query: 342 PPICWFWDGGLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCASTQKLKKTPP 163
PP+ GGLM SSE V++ P QT T+VG PLRPI PLANGY T KLK PP
Sbjct: 3098 PPLPETSSGGLMVIQSSETVIDTSPDQT*TIVGTFPLRPINPLANGYI*VKTHKLKNIPP 2919
Query: 162 SSLLHCGISL*MVRLNPTAMPIRFTIMITMGGIISDVHLTMYRXXXXXXXXSP 4
+L HCGI+L +V P + R T+MI G + VH TM R SP
Sbjct: 2918 INLPHCGITLYIVLEAPITIATRLTMMIVSGMMNKPVHFTM*RSAKMSSSSSP 2760
>ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complete sequence
Length = 19705359
Score = 200 bits (431), Expect = 4e-050
Identities = 75/113 (66%), Positives = 91/113 (80%)
Frame = +2 / -1
Query: 5 GDDVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSF 184
G+D DD F DLYIVKWT L I P+ I++VNL+ I +G SRTIYS IPQW KL+GG+FFS
Sbjct: 14043921 GEDEDDIFADLYIVKWTGLFIMPLTIIIVNLVAIVIGASRTIYSVIPQWGKLMGGIFFSL 14043742
Query: 185 WVLAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINPPSQNQQIGG 343
WVL H+YPFAKGLMGRRG+ PTIV+VW+GL+SIT+SLLW+ I+PP GG
Sbjct: 14043741 WVLTHMYPFAKGLMGRRGKVPTIVYVWSGLVSITVSLLWITISPPDDVSGSGG 14043583
Score = 155 bits (333), Expect = 1e-036
Identities = 59/102 (57%), Positives = 74/102 (72%)
Frame = +2 / -2
Query: 11 DVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWV 190
D D +F +LY+ KWTSL+IPP I++VNL+GI G S I S W L+G + F+FWV
Sbjct: 10874501 DEDGDFAELYVFKWTSLLIPPTTILLVNLVGIVAGVSYAINSGYQSWGPLMGKLLFAFWV 10874322
Query: 191 LAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
+AHLYPF KGL+GR+ RTPTIV VW+ LL+ SLLWV INP
Sbjct: 10874321 VAHLYPFLKGLLGRQNRTPTIVIVWSALLASIFSLLWVRINP 10874196
Score = 142 bits (305), Expect = 9e-033
Identities = 50/100 (50%), Positives = 72/100 (72%)
Frame = +2 / +2
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
D EF +LYI KWTSL+IPP ++++N++G+ VG S I + W L G +FF+ WV+
Sbjct: 9296219 DGEFSELYIFKWTSLLIPPTTLLIINIVGVIVGVSDAINNGYDSWGPLFGRLFFALWVIV 9296398
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGL+G++ R PTI+ VW+ LL+ ++LLWV +NP
Sbjct: 9296399 HLYPFLKGLLGKQDRVPTIILVWSILLASILTLLWVRVNP 9296518
Score = 108 bits (230), Expect = 2e-022
Identities = 53/113 (46%), Positives = 63/113 (55%)
Frame = -3 / +2
Query: 342 PPICWFWDGGLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCASTQKLKKTPP 163
PP+ GGLM SSE V++ P QT T+VG PLRPI PLANGY T KLK PP
Sbjct: 14043584 PPLPETSSGGLMVIQSSETVIDTSPDQT*TIVGTFPLRPINPLANGYI*VKTHKLKNIPP 14043763
Query: 162 SSLLHCGISL*MVRLNPTAMPIRFTIMITMGGIISDVHLTMYRXXXXXXXXSP 4
+L HCGI+L +V P + R T+MI G + VH TM R SP
Sbjct: 14043764 INLPHCGITLYIVLEAPITIATRLTMMIVSGMMNKPVHFTM*RSAKMSSSSSP 14043922
>gb|AV548634.1|AV548634 AV548634 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZL58e06F 3', mRNA sequence
Length = 507
Score = 198 bits (427), Expect = 1e-049
Identities = 78/92 (84%), Positives = 88/92 (95%)
Frame = +2 / -1
Query: 86 MVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVW 265
MVNLI IAVGFSRTIYS +PQWSKL+GGVFFSFWVLAHLYPFAKGLMGRRGRTPTIV+VW
Sbjct: 507 MVNLIAIAVGFSRTIYSVVPQWSKLIGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVYVW 328
Query: 266 AGLLSITISLLWVAINPPSQNQQIGGSFTFP* 361
+GL++ITISLLWVAINPP+ N +IGG+F+FP*
Sbjct: 327 SGLVAITISLLWVAINPPAGNTEIGGNFSFP* 232
Score = 134 bits (288), Expect = 2e-030
Identities = 61/93 (65%), Positives = 68/93 (73%)
Frame = -3 / +2
Query: 366 SFHGNVNDPPICWFWDGGLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCAST 187
++HG + PPI GGLMAT EMVM RP QT T+VGV PL PIRPLANG RCA T
Sbjct: 227 TYHGKLKFPPISVLPAGGLMATQRREMVMATRPDQTYTIVGVLPLLPIRPLANG*RCAKT 406
Query: 186 QKLKKTPPSSLLHCGISL*MVRLNPTAMPIRFT 88
QKLK TPP SLLH G +L*+V LNPTA+ IRFT
Sbjct: 407 QKLKNTPPISLLH*GTTL*IVLLNPTAIAIRFT 505
>dbj|AK175868.1| Arabidopsis thaliana mRNA for putative cellulose synthase, partial
cds, clone: RAFL22-49-F01
Length = 2586
Score = 198 bits (427), Expect = 1e-049
Identities = 74/113 (65%), Positives = 91/113 (80%)
Frame = +2 / +2
Query: 5 GDDVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSF 184
G+D DD F DLYIVKWT L I P+ I++VNL+ I +G SRTIYS IPQW KL+GG+FFS
Sbjct: 2117 GEDEDDIFADLYIVKWTGLFIMPLTIIIVNLVAIVIGASRTIYSVIPQWGKLMGGIFFSL 2296
Query: 185 WVLAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINPPSQNQQIGG 343
WVL H+YPFAKGLMG+RG+ PTIV+VW+GL+SIT+SLLW+ I+PP GG
Sbjct: 2297 WVLTHMYPFAKGLMGQRGKVPTIVYVWSGLVSITVSLLWITISPPDDVSGSGG 2455
Score = 104 bits (221), Expect = 3e-021
Identities = 52/113 (46%), Positives = 62/113 (54%)
Frame = -3 / -1
Query: 342 PPICWFWDGGLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCASTQKLKKTPP 163
PP+ GGLM SSE V++ P QT T+VG PL PI PLANGY T KLK PP
Sbjct: 2454 PPLPETSSGGLMVIQSSETVIDTSPDQT*TIVGTFPL*PINPLANGYI*VKTHKLKNIPP 2275
Query: 162 SSLLHCGISL*MVRLNPTAMPIRFTIMITMGGIISDVHLTMYRXXXXXXXXSP 4
+L HCGI+L +V P + R T+MI G + VH TM R SP
Sbjct: 2274 INLPHCGITLYIVLEAPITIATRLTMMIVSGMMNKPVHFTM*RSAKMSSSSSP 2116
>gb|AI996738.1|AI996738 701668165 A. thaliana, Columbia Col-0, root-1 Arabidopsis thaliana
cDNA clone 701668165, mRNA sequence
Length = 536
Score = 186 bits (400), Expect = 7e-046
Identities = 74/86 (86%), Positives = 82/86 (95%)
Frame = +2 / -1
Query: 104 IAVGFSRTIYSEIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWAGLLSI 283
IAVGF+RTIYS IPQWSKL+GGVF SFWVLAHLYPFAKGLMGRRGRTPTIV+VW+GL++I
Sbjct: 485 IAVGFTRTIYSVIPQWSKLIGGVFXSFWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVAI 306
Query: 284 TISLLWVAINPPSQNQQIGGSFTFP* 361
TISLLWVAINPP+ + QIGGSFTFP*
Sbjct: 305 TISLLWVAINPPAGSTQIGGSFTFP* 228
Score = 119 bits (255), Expect(2) = 1e-026
Identities = 55/88 (62%), Positives = 64/88 (72%)
Frame = -3 / +1
Query: 318 GGLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCASTQKLKKTPPSSLLHCGI 139
GGLMAT S +MVM P QT TMVGV PL PI PLANG R ASTQKLK TPP +LLHCGI
Sbjct: 271 GGLMATQSRDMVMATSPDQTYTMVGVLPLLPISPLANG*R*ASTQKLKNTPPINLLHCGI 450
Query: 138 SL*MVRLNPTAMPIRFTIMITMGGIISD 55
+L +V +NPTAM + + +GGI+ D
Sbjct: 451 TLYIVLVNPTAMGLGSPS*LVIGGIMRD 534
Score = 22.1 bits (42), Expect(2) = 1e-026
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -3 / +1
Query: 360 HGNVNDPPI 334
HG V DPPI
Sbjct: 229 HGKVKDPPI 255
>gb|AV817996.1|AV817996 AV817996 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-96-H17 3',
mRNA sequence
Length = 405
Score = 185 bits (398), Expect = 1e-045
Identities = 72/91 (79%), Positives = 80/91 (87%)
Frame = +2 / -1
Query: 59 LMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRG 238
LM+PP+ IMMVN+I IAVG +RT+YS PQWSKL+GGVFFSFWVL HLYPFAKGLMGRRG
Sbjct: 402 LMVPPLTIMMVNMIAIAVGLARTLYSPFPQWSKLVGGVFFSFWVLCHLYPFAKGLMGRRG 223
Query: 239 RTPTIVFVWAGLLSITISLLWVAINPPSQNQ 331
R PTIVFVW+GLLSI +SLLWV INPPS Q
Sbjct: 222 RVPTIVFVWSGLLSIIVSLLWVYINPPSGKQ 130
Score = 118 bits (253), Expect = 1e-025
Identities = 52/89 (58%), Positives = 63/89 (70%)
Frame = -3 / +2
Query: 327 FWDGGLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCASTQKLKKTPPSSLLH 148
F +GGL+ T S++ +++ +P T TMVG PL PI PLANGYR STQKLK TPP+SLLH
Sbjct: 134 FPEGGLI*TQSNDTIIDNKPDHTNTMVGTLPLLPINPLANGYR*QSTQKLKNTPPTSLLH 313
Query: 147 CGISL*MVRLNPTAMPIRFTIMITMGGII 61
CG L V +PTA+ I FTIMI GG I
Sbjct: 314 CGNGLYRVLASPTAIAIIFTIMIVNGGTI 400
>gb|Z35212.1|Z35212 ATTS3758 Strasbourg-A Arabidopsis thaliana cDNA clone FAI228 3',
mRNA sequence
Length = 366
Score = 184 bits (397), Expect = 2e-045
Identities = 74/80 (92%), Positives = 76/80 (95%)
Frame = +2 / +1
Query: 2 GGDDVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFS 181
GG+DVDDEF DLYIVKWTSLMIPPI IMMVNLI IAVGFSRTIYS IPQWSKL+GGVFFS
Sbjct: 127 GGEDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGFSRTIYSVIPQWSKLIGGVFFS 306
Query: 182 FWVLAHLYPFAKGLMGRRGR 241
FWVLAHLYPFAKGLMGRRGR
Sbjct: 307 FWVLAHLYPFAKGLMGRRGR 366
Score = 119 bits (254), Expect = 1e-025
Identities = 53/79 (67%), Positives = 58/79 (73%)
Frame = -3 / -2
Query: 237 PLRPIRPLANGYRCASTQKLKKTPPSSLLHCGISL*MVRLNPTAMPIRFTIMITMGGIIS 58
PL PI PLANG R ASTQKLK TPP +LLHCGI+L +V LNPTAM IRFTIMI +GGI+
Sbjct: 362 PLLPISPLANG*R*ASTQKLKNTPPINLLHCGITLYIVLLNPTAMAIRFTIMIVIGGIMR 183
Query: 57 DVHLTMYRXXXXXXXXSPP 1
DVH TM R SPP
Sbjct: 182 DVHFTM*RSANSSSTSSPP 126
>gb|AV796167.1|AV796167 AV796167 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-06-N09 3',
mRNA sequence
Length = 430
Score = 159 bits (342), Expect(2) = 2e-044
Identities = 62/80 (77%), Positives = 68/80 (85%)
Frame = +2 / -1
Query: 92 NLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWAG 271
N+I IAVG + T+YS PQWSKL+GGVFFSFWVL HLYPFAKGLMGRRGR PTIVFVW+G
Sbjct: 370 NMIAIAVGLATTLYSPFPQWSKLVGGVFFSFWVLCHLYPFAKGLMGRRGRVPTIVFVWSG 191
Query: 272 LLSITISLLWVAINPPSQNQ 331
L SI +SLLWV INPPS Q
Sbjct: 190 LFSIIVSLLWVYINPPSGKQ 131
Score = 108 bits (231), Expect(2) = 4e-025
Identities = 47/77 (61%), Positives = 57/77 (74%)
Frame = -3 / +3
Query: 327 FWDGGLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCASTQKLKKTPPSSLLH 148
F +GGL+ T S++ ++E +P QT TMVG PL PI PLANGYR STQKLK TPP+SLLH
Sbjct: 135 FPEGGLI*TQSNDTIIENKPDQTNTMVGTLPLLPINPLANGYR*QSTQKLKNTPPTSLLH 314
Query: 147 CGISL*MVRLNPTAMPI 97
CG L* V +PTA+ I
Sbjct: 315 CGNGL*RVVASPTAIAI 365
Score = 41.8 bits (85), Expect(2) = 2e-044
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +2 / -2
Query: 32 DLYIVKWTSLMIPPIVIMMV 91
DLY+VKW+ LM+PP+ IMMV
Sbjct: 429 DLYVVKWSFLMVPPLTIMMV 370
Score = 28.1 bits (55), Expect(2) = 4e-025
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -3 / +2
Query: 90 TIMITMGGIISDVHLTMYR 34
TIMI GG I +H T YR
Sbjct: 371 TIMIVNGGTIKKLHFTTYR 427
>emb|AL807029.1| Arabidopsis thaliana transposon insertion STS SM_3.19802, sequence
tagged site
Length = 424
Score = 175 bits (377), Expect = 1e-042
Identities = 63/103 (61%), Positives = 84/103 (81%)
Frame = +2 / +3
Query: 2 GGDDVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFS 181
GGDD DDEF DLY+ KWT+LMIPP+ I+++N++ I RT++S PQWS LLGG FF+
Sbjct: 27 GGDDEDDEFADLYLFKWTALMIPPLTIIILNIVAILFAVCRTVFSANPQWSNLLGGTFFA 206
Query: 182 FWVLAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAI 310
WVL H+YPFAKGLMGR G+TPT+V+VW+GL++I +SLL++ I
Sbjct: 207 SWVLLHMYPFAKGLMGRGGKTPTVVYVWSGLIAICLSLLYITI 335
>gb|AC084165.1|AC084165 Arabidopsis thaliana chromosome 1 BAC F3C3 genomic sequence, complete
sequence
Length = 90132
Score = 175 bits (377), Expect = 1e-042
Identities = 63/103 (61%), Positives = 84/103 (81%)
Frame = +2 / +2
Query: 2 GGDDVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFS 181
GGDD DDEF DLY+ KWT+LMIPP+ I+++N++ I RT++S PQWS LLGG FF+
Sbjct: 39293 GGDDEDDEFADLYLFKWTALMIPPLTIIILNIVAILFAVCRTVFSANPQWSNLLGGTFFA 39472
Query: 182 FWVLAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAI 310
WVL H+YPFAKGLMGR G+TPT+V+VW+GL++I +SLL++ I
Sbjct: 39473 SWVLLHMYPFAKGLMGRGGKTPTVVYVWSGLIAICLSLLYITI 39601
>ref|NM_102951.1| Arabidopsis thaliana ATCSLD6; cellulose synthase/ transferase,
transferring glycosyl groups AT1G32180 (ATCSLD6) mRNA,
complete cds
Length = 2940
Score = 175 bits (377), Expect = 1e-042
Identities = 63/103 (61%), Positives = 84/103 (81%)
Frame = +2 / +1
Query: 2 GGDDVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFS 181
GGDD DDEF DLY+ KWT+LMIPP+ I+++N++ I RT++S PQWS LLGG FF+
Sbjct: 2590 GGDDEDDEFADLYLFKWTALMIPPLTIIILNIVAILFAVCRTVFSANPQWSNLLGGTFFA 2769
Query: 182 FWVLAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAI 310
WVL H+YPFAKGLMGR G+TPT+V+VW+GL++I +SLL++ I
Sbjct: 2770 SWVLLHMYPFAKGLMGRGGKTPTVVYVWSGLIAICLSLLYITI 2898
>gb|AV546030.1|AV546030 AV546030 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZL07d10F 3', mRNA sequence
Length = 388
Score = 172 bits (370), Expect = 1e-041
Identities = 68/84 (80%), Positives = 74/84 (88%)
Frame = +2 / -3
Query: 80 IMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVF 259
IMMVN+I IAVG +RT+YS PQWSKL+GGVFFSFWVL HLYPFAKGLMGRRGR PTIVF
Sbjct: 386 IMMVNMIAIAVGLARTLYSPFPQWSKLVGGVFFSFWVLCHLYPFAKGLMGRRGRVPTIVF 207
Query: 260 VWAGLLSITISLLWVAINPPSQNQ 331
VW+GLLSI +SLLWV INPPS Q
Sbjct: 206 VWSGLLSIIVSLLWVYINPPSGKQ 135
Score = 112 bits (240), Expect = 8e-024
Identities = 49/83 (59%), Positives = 60/83 (72%)
Frame = -3 / +1
Query: 327 FWDGGLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCASTQKLKKTPPSSLLH 148
F +GGL+ T S++ +++ +P T TMVG PL PI PLANGYR STQKLK TPP+SLLH
Sbjct: 139 FPEGGLI*TQSNDTIIDNKPDHTNTMVGTLPLLPINPLANGYR*QSTQKLKNTPPTSLLH 318
Query: 147 CGISL*MVRLNPTAMPIRFTIMI 79
CG L V +PTA+ I FTIMI
Sbjct: 319 CGNGLYRVLASPTAIAIIFTIMI 387
>gb|BP654668.1|BP654668 BP654668 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-18-H05 3',
mRNA sequence
Length = 368
Score = 161 bits (346), Expect = 2e-038
Identities = 63/79 (79%), Positives = 69/79 (87%)
Frame = +2 / -3
Query: 95 LIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWAGL 274
+I IAVG +RT+YS PQWSKL+GGVFFSFWVL HLYPFAKGLMGRRGR PTIVFVW+GL
Sbjct: 366 MIAIAVGLARTLYSPFPQWSKLVGGVFFSFWVLCHLYPFAKGLMGRRGRVPTIVFVWSGL 187
Query: 275 LSITISLLWVAINPPSQNQ 331
LSI +SLLWV INPPS Q
Sbjct: 186 LSIIVSLLWVYINPPSGKQ 130
Score = 103 bits (219), Expect = 6e-021
Identities = 44/77 (57%), Positives = 55/77 (71%)
Frame = -3 / +2
Query: 327 FWDGGLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCASTQKLKKTPPSSLLH 148
F +GGL+ T S++ +++ +P T TMVG PL PI PLANGYR STQKLK TPP+SLLH
Sbjct: 134 FPEGGLI*TQSNDTIIDNKPDHTNTMVGTLPLLPINPLANGYR*QSTQKLKNTPPTSLLH 313
Query: 147 CGISL*MVRLNPTAMPI 97
CG L V +PTA+ I
Sbjct: 314 CGNGLYRVLASPTAIAI 364
>gb|AV536640.1|AV536640 AV536640 Arabidopsis thaliana liquid-cultured seedlings Columbia
Arabidopsis thaliana cDNA clone pAZNII0375R 5', mRNA
sequence
Length = 350
Score = 158 bits (340), Expect = 1e-037
Identities = 62/76 (81%), Positives = 67/76 (88%)
Frame = +2 / +3
Query: 104 IAVGFSRTIYSEIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWAGLLSI 283
IAVG +RT+YS PQWSKL+GGVFFSFWVL HLYPFAKGLMGRRGR PTIVFVW+GLLSI
Sbjct: 3 IAVGLARTLYSPFPQWSKLVGGVFFSFWVLCHLYPFAKGLMGRRGRVPTIVFVWSGLLSI 182
Query: 284 TISLLWVAINPPSQNQ 331
+SLLWV INPPS Q
Sbjct: 183 IVSLLWVYINPPSGKQ 230
>gb|AV536646.1|AV536646 AV536646 Arabidopsis thaliana liquid-cultured seedlings Columbia
Arabidopsis thaliana cDNA clone pAZNII0383R 5', mRNA
sequence
Length = 361
Score = 158 bits (340), Expect = 1e-037
Identities = 62/76 (81%), Positives = 67/76 (88%)
Frame = +2 / +3
Query: 104 IAVGFSRTIYSEIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWAGLLSI 283
IAVG +RT+YS PQWSKL+GGVFFSFWVL HLYPFAKGLMGRRGR PTIVFVW+GLLSI
Sbjct: 3 IAVGLARTLYSPFPQWSKLVGGVFFSFWVLCHLYPFAKGLMGRRGRVPTIVFVWSGLLSI 182
Query: 284 TISLLWVAINPPSQNQ 331
+SLLWV INPPS Q
Sbjct: 183 IVSLLWVYINPPSGKQ 230
>gb|AC006300.4| Arabidopsis thaliana chromosome 2 clone F13B15 map mi238, complete
sequence
Length = 88770
Score = 155 bits (333), Expect = 1e-036
Identities = 59/102 (57%), Positives = 74/102 (72%)
Frame = +2 / -1
Query: 11 DVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWV 190
D D +F +LY+ KWTSL+IPP I++VNL+GI G S I S W L+G + F+FWV
Sbjct: 66639 DEDGDFAELYVFKWTSLLIPPTTILLVNLVGIVAGVSYAINSGYQSWGPLMGKLLFAFWV 66460
Query: 191 LAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
+AHLYPF KGL+GR+ RTPTIV VW+ LL+ SLLWV INP
Sbjct: 66459 VAHLYPFLKGLLGRQNRTPTIVIVWSALLASIFSLLWVRINP 66334
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,195,219,981
Number of Sequences: 1013581
Number of extensions: 16116863
Number of successful extensions: 156358
Number of sequences better than 1.0e-020: 205
length of database: 302,980,290
effective HSP length: 55
effective length of database: 247,233,335
effective search space used: 38568400260
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)