TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2440570.2.2
(905 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AV825327.1|AV825327 AV825327 RAFL7 Arabidopsis thaliana ... 376 e-103
gb|AY056141.1| Arabidopsis thaliana putative 60S ribosomal ... 376 e-103
gb|BT000711.1| Arabidopsis thaliana clone RAFL09-17-C05 (R0... 376 e-103
ref|NM_122667.2| Arabidopsis thaliana structural constituen... 376 e-103
gb|U15741.1|ATU15741 Arabidopsis thaliana cytoplasmic ribos... 374 e-102
gb|AV822119.1|AV822119 AV822119 RAFL5 Arabidopsis thaliana ... 373 e-102
gb|AY037224.1| Arabidopsis thaliana AT3g05590/F18C1_14 mRNA... 373 e-102
gb|AY122996.1| Arabidopsis thaliana putative 60S ribosomal ... 373 e-102
ref|NM_111432.2| Arabidopsis thaliana RPL18 (RIBOSOMAL PROT... 373 e-102
gb|AY060533.1| Arabidopsis thaliana AT3g05590/F18C1_14 mRNA... 371 e-101
gb|CB264110.1|CB264110 91-E014993-035-003-E23-T7R MPIZ-ADIS... 370 e-101
gb|CF652156.1|CF652156 37-L020525-066-003-J09-SP6P MPIZ-ADI... 368 e-100
emb|BX822829.1|CNS0A4S7 Arabidopsis thaliana Full-length cD... 368 e-100
gb|CA781829.1|CA781829 051E12AF Infected Arabidopsis Leaf A... 366 e-100
gb|CF652057.1|CF652057 31-L020362-066-002-N08-SP6P MPIZ-ADI... 366 e-100
emb|BX822675.1|CNS0A7MK Arabidopsis thaliana Full-length cD... 363 5e-099
gb|BE038821.1|BE038821 AB07C09 AB Arabidopsis thaliana cDNA... 358 1e-097
gb|CB254873.1|CB254873 57-E018361-019-007-A16-T7R MPIZ-ADIS... 343 4e-093
gb|AV559994.1|AV559994 AV559994 Arabidopsis thaliana green ... 325 1e-087
gb|AV550190.1|AV550190 AV550190 Arabidopsis thaliana roots ... 319 1e-085
gb|AV782778.1|AV782778 AV782778 RAFL5 Arabidopsis thaliana ... 314 2e-084
gb|AV827922.1|AV827922 AV827922 RAFL9 Arabidopsis thaliana ... 236 2e-083
gb|AC011620.8|ATAC011620 Arabidopsis thaliana chromosome II... 122 6e-080
gb|AC007399.1|AC007399 Arabidopsis thaliana BAC F14I23 from... 118 2e-079
gb|AV535094.1|AV535094 AV535094 Arabidopsis thaliana flower... 277 3e-073
gb|AW004212.1|AW004212 701549078 A. thaliana, Columbia Col-... 275 1e-072
emb|BX832577.1|CNS0A1WZ Arabidopsis thaliana Full-length cD... 265 1e-069
gb|AC002535.3| Arabidopsis thaliana chromosome 2 clone T30B... 108 4e-069
gb|BP853538.1|BP853538 BP853538 RAFL21 Arabidopsis thaliana... 245 1e-063
gb|BP820622.1|BP820622 BP820622 RAFL19 Arabidopsis thaliana... 243 9e-063
gb|AV552450.1|AV552450 AV552450 Arabidopsis thaliana roots ... 213 5e-062
gb|BP813190.1|BP813190 BP813190 RAFL19 Arabidopsis thaliana... 234 1e-061
gb|AV552035.1|AV552035 AV552035 Arabidopsis thaliana roots ... 236 1e-060
gb|BP844795.1|BP844795 BP844795 RAFL21 Arabidopsis thaliana... 236 1e-060
emb|BX823193.1|CNS0A5VT Arabidopsis thaliana Full-length cD... 232 1e-059
gb|BP857535.1|BP857535 BP857535 RAFL21 Arabidopsis thaliana... 232 2e-059
gb|AV542782.1|AV542782 AV542782 Arabidopsis thaliana roots ... 231 2e-059
gb|BP844305.1|BP844305 BP844305 RAFL21 Arabidopsis thaliana... 216 4e-059
gb|BP812879.1|BP812879 BP812879 RAFL19 Arabidopsis thaliana... 228 2e-058
ref|NM_130325.1| Arabidopsis thaliana structural constituen... 132 3e-058
gb|BP798427.1|BP798427 BP798427 RAFL14 Arabidopsis thaliana... 226 6e-058
gb|BP796897.1|BP796897 BP796897 RAFL14 Arabidopsis thaliana... 179 7e-058
gb|BP814189.1|BP814189 BP814189 RAFL19 Arabidopsis thaliana... 226 1e-057
gb|BP586227.1|BP586227 BP586227 RAFL15 Arabidopsis thaliana... 225 1e-057
gb|BP864195.1|BP864195 BP864195 RAFL21 Arabidopsis thaliana... 225 1e-057
gb|AV538046.1|AV538046 AV538046 Arabidopsis thaliana roots ... 224 4e-057
gb|BP823019.1|BP823019 BP823019 RAFL19 Arabidopsis thaliana... 221 2e-056
gb|BP868224.1|BP868224 BP868224 RAFL21 Arabidopsis thaliana... 193 8e-056
gb|AV543075.1|AV543075 AV543075 Arabidopsis thaliana roots ... 219 9e-056
gb|BP798204.1|BP798204 BP798204 RAFL14 Arabidopsis thaliana... 136 1e-055
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 122 2e-055
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 122 2e-055
gb|BP842649.1|BP842649 BP842649 RAFL21 Arabidopsis thaliana... 156 3e-055
gb|BP851600.1|BP851600 BP851600 RAFL21 Arabidopsis thaliana... 124 3e-055
gb|BP862150.1|BP862150 BP862150 RAFL21 Arabidopsis thaliana... 166 5e-055
gb|BP802761.1|BP802761 BP802761 RAFL14 Arabidopsis thaliana... 167 2e-054
gb|BP845763.1|BP845763 BP845763 RAFL21 Arabidopsis thaliana... 215 2e-054
gb|BP843276.1|BP843276 BP843276 RAFL21 Arabidopsis thaliana... 191 3e-054
gb|BP868414.1|BP868414 BP868414 RAFL21 Arabidopsis thaliana... 185 3e-054
gb|BP835680.1|BP835680 BP835680 RAFL19 Arabidopsis thaliana... 175 3e-054
gb|BP868924.1|BP868924 BP868924 RAFL21 Arabidopsis thaliana... 213 6e-054
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 118 6e-054
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 118 6e-054
gb|BP851830.1|BP851830 BP851830 RAFL21 Arabidopsis thaliana... 213 8e-054
gb|AW004263.1|AW004263 701669857 A. thaliana, Columbia Col-... 210 4e-053
gb|BP813557.1|BP813557 BP813557 RAFL19 Arabidopsis thaliana... 207 5e-052
gb|BP822627.1|BP822627 BP822627 RAFL19 Arabidopsis thaliana... 188 7e-052
gb|BP801137.1|BP801137 BP801137 RAFL14 Arabidopsis thaliana... 160 7e-052
gb|BP813523.1|BP813523 BP813523 RAFL19 Arabidopsis thaliana... 130 2e-051
gb|BP860180.1|BP860180 BP860180 RAFL21 Arabidopsis thaliana... 178 5e-051
gb|BP813743.1|BP813743 BP813743 RAFL19 Arabidopsis thaliana... 134 4e-050
gb|BP854674.1|BP854674 BP854674 RAFL21 Arabidopsis thaliana... 155 6e-050
gb|BP779131.1|BP779131 BP779131 RAFL7 Arabidopsis thaliana ... 197 4e-049
gb|BP867531.1|BP867531 BP867531 RAFL21 Arabidopsis thaliana... 164 4e-049
gb|BP796589.1|BP796589 BP796589 RAFL5 Arabidopsis thaliana ... 197 5e-049
gb|BP565250.1|BP565250 BP565250 RAFL14 Arabidopsis thaliana... 196 7e-049
gb|BP821222.1|BP821222 BP821222 RAFL19 Arabidopsis thaliana... 188 1e-048
gb|BP809195.1|BP809195 BP809195 RAFL16 Arabidopsis thaliana... 134 2e-048
gb|BP848813.1|BP848813 BP848813 RAFL21 Arabidopsis thaliana... 155 2e-048
gb|BP802107.1|BP802107 BP802107 RAFL14 Arabidopsis thaliana... 194 4e-048
gb|BP801399.1|BP801399 BP801399 RAFL14 Arabidopsis thaliana... 132 5e-048
gb|BP829227.1|BP829227 BP829227 RAFL19 Arabidopsis thaliana... 95 5e-048
gb|BP800537.1|BP800537 BP800537 RAFL14 Arabidopsis thaliana... 177 7e-048
gb|BP797186.1|BP797186 BP797186 RAFL14 Arabidopsis thaliana... 169 9e-048
gb|BP826238.1|BP826238 BP826238 RAFL19 Arabidopsis thaliana... 191 2e-047
gb|BP819869.1|BP819869 BP819869 RAFL19 Arabidopsis thaliana... 110 3e-047
gb|BP846504.1|BP846504 BP846504 RAFL21 Arabidopsis thaliana... 111 4e-047
gb|BP816223.1|BP816223 BP816223 RAFL19 Arabidopsis thaliana... 183 4e-047
gb|BP842212.1|BP842212 BP842212 RAFL21 Arabidopsis thaliana... 148 6e-047
gb|AV799915.1|AV799915 AV799915 RAFL9 Arabidopsis thaliana ... 190 6e-047
gb|CB185942.1|CB185942 EST01133 Arabidopsis virulent Pseudo... 113 8e-047
gb|BP855236.1|BP855236 BP855236 RAFL21 Arabidopsis thaliana... 149 8e-047
gb|BP830020.1|BP830020 BP830020 RAFL19 Arabidopsis thaliana... 127 2e-046
gb|T88582.1|T88582 12278 Lambda-PRL2 Arabidopsis thaliana c... 188 2e-046
gb|BP854760.1|BP854760 BP854760 RAFL21 Arabidopsis thaliana... 136 3e-046
gb|BP582516.1|BP582516 BP582516 RAFL14 Arabidopsis thaliana... 188 3e-046
gb|BP570489.1|BP570489 BP570489 RAFL14 Arabidopsis thaliana... 164 1e-045
gb|BP581119.1|BP581119 BP581119 RAFL14 Arabidopsis thaliana... 186 1e-045
gb|BP809097.1|BP809097 BP809097 RAFL16 Arabidopsis thaliana... 124 1e-045
gb|BP569107.1|BP569107 BP569107 RAFL14 Arabidopsis thaliana... 117 2e-045
gb|BP848292.1|BP848292 BP848292 RAFL21 Arabidopsis thaliana... 153 1e-044
gb|BP582622.1|BP582622 BP582622 RAFL14 Arabidopsis thaliana... 182 1e-044
gb|AV798876.1|AV798876 AV798876 RAFL9 Arabidopsis thaliana ... 182 2e-044
gb|BP817978.1|BP817978 BP817978 RAFL19 Arabidopsis thaliana... 84 2e-044
gb|BP564039.1|BP564039 BP564039 RAFL14 Arabidopsis thaliana... 181 4e-044
gb|BP846681.1|BP846681 BP846681 RAFL21 Arabidopsis thaliana... 132 4e-044
gb|BP859852.1|BP859852 BP859852 RAFL21 Arabidopsis thaliana... 104 5e-044
gb|BP835483.1|BP835483 BP835483 RAFL19 Arabidopsis thaliana... 106 7e-044
gb|AV785594.1|AV785594 AV785594 RAFL6 Arabidopsis thaliana ... 179 1e-043
gb|BP803026.1|BP803026 BP803026 RAFL14 Arabidopsis thaliana... 159 2e-043
gb|BP587066.1|BP587066 BP587066 RAFL15 Arabidopsis thaliana... 178 2e-043
gb|BP590170.1|BP590170 BP590170 RAFL15 Arabidopsis thaliana... 178 2e-043
gb|BP861583.1|BP861583 BP861583 RAFL21 Arabidopsis thaliana... 71 2e-043
gb|BP817272.1|BP817272 BP817272 RAFL19 Arabidopsis thaliana... 111 2e-043
gb|BP643928.1|BP643928 BP643928 RAFL19 Arabidopsis thaliana... 167 4e-043
gb|BP858433.1|BP858433 BP858433 RAFL21 Arabidopsis thaliana... 109 1e-042
gb|BP572722.1|BP572722 BP572722 RAFL14 Arabidopsis thaliana... 116 2e-042
gb|AV798678.1|AV798678 AV798678 RAFL9 Arabidopsis thaliana ... 175 2e-042
gb|BP574543.1|BP574543 BP574543 RAFL14 Arabidopsis thaliana... 173 8e-042
gb|BP665657.1|BP665657 BP665657 RAFL21 Arabidopsis thaliana... 173 8e-042
gb|BP589410.1|BP589410 BP589410 RAFL15 Arabidopsis thaliana... 172 1e-041
gb|BP596379.1|BP596379 BP596379 RAFL15 Arabidopsis thaliana... 172 1e-041
gb|BP801000.1|BP801000 BP801000 RAFL14 Arabidopsis thaliana... 90 2e-041
gb|BP816617.1|BP816617 BP816617 RAFL19 Arabidopsis thaliana... 92 2e-041
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 108 5e-041
gb|BP794410.1|BP794410 BP794410 RAFL7 Arabidopsis thaliana ... 170 7e-041
gb|AA389792.1|AA389792 OS107 NaCl-treated Arabidopsis subtr... 169 1e-040
gb|BP588244.1|BP588244 BP588244 RAFL15 Arabidopsis thaliana... 169 1e-040
gb|BP794339.1|BP794339 BP794339 RAFL7 Arabidopsis thaliana ... 169 1e-040
gb|BP573170.1|BP573170 BP573170 RAFL14 Arabidopsis thaliana... 168 2e-040
gb|BP825082.1|BP825082 BP825082 RAFL19 Arabidopsis thaliana... 153 2e-040
gb|BP815153.1|BP815153 BP815153 RAFL19 Arabidopsis thaliana... 111 3e-040
gb|AV789092.1|AV789092 AV789092 RAFL6 Arabidopsis thaliana ... 167 5e-040
gb|BP830636.1|BP830636 BP830636 RAFL19 Arabidopsis thaliana... 133 6e-040
gb|AV811194.1|AV811194 AV811194 RAFL9 Arabidopsis thaliana ... 166 7e-040
gb|BP563291.1|BP563291 BP563291 RAFL14 Arabidopsis thaliana... 166 7e-040
gb|BP644058.1|BP644058 BP644058 RAFL19 Arabidopsis thaliana... 166 7e-040
gb|BP825445.1|BP825445 BP825445 RAFL19 Arabidopsis thaliana... 111 1e-039
gb|AV789045.1|AV789045 AV789045 RAFL6 Arabidopsis thaliana ... 166 1e-039
gb|BP618021.1|BP618021 BP618021 RAFL16 Arabidopsis thaliana... 166 1e-039
gb|BP856964.1|BP856964 BP856964 RAFL21 Arabidopsis thaliana... 112 2e-039
gb|BP670478.1|BP670478 BP670478 RAFL21 Arabidopsis thaliana... 153 4e-039
gb|BP630665.1|BP630665 BP630665 RAFL17 Arabidopsis thaliana... 164 5e-039
gb|BP792479.1|BP792479 BP792479 RAFL7 Arabidopsis thaliana ... 164 5e-039
gb|BP831474.1|BP831474 BP831474 RAFL19 Arabidopsis thaliana... 112 8e-039
gb|BP584798.1|BP584798 BP584798 RAFL14 Arabidopsis thaliana... 162 1e-038
gb|BP594504.1|BP594504 BP594504 RAFL15 Arabidopsis thaliana... 161 3e-038
gb|BP603650.1|BP603650 BP603650 RAFL16 Arabidopsis thaliana... 161 3e-038
gb|BP668226.1|BP668226 BP668226 RAFL21 Arabidopsis thaliana... 160 4e-038
gb|BP816293.1|BP816293 BP816293 RAFL19 Arabidopsis thaliana... 87 5e-038
gb|BP573575.1|BP573575 BP573575 RAFL14 Arabidopsis thaliana... 160 8e-038
gb|BP574755.1|BP574755 BP574755 RAFL14 Arabidopsis thaliana... 159 1e-037
gb|BP778148.1|BP778148 BP778148 RAFL7 Arabidopsis thaliana ... 159 1e-037
gb|BP852019.1|BP852019 BP852019 RAFL21 Arabidopsis thaliana... 100 2e-037
gb|T04593.1|T04593 640 Lambda-PRL2 Arabidopsis thaliana cDN... 158 3e-037
gb|BP648105.1|BP648105 BP648105 RAFL19 Arabidopsis thaliana... 158 3e-037
gb|BP663630.1|BP663630 BP663630 RAFL21 Arabidopsis thaliana... 158 3e-037
gb|CW846934.1|CW846934 GT13816.Ds5.01.29.2004.jx50.782 Arab... 98 3e-037
gb|BP799006.1|BP799006 BP799006 RAFL14 Arabidopsis thaliana... 105 4e-037
gb|BP626619.1|BP626619 BP626619 RAFL17 Arabidopsis thaliana... 157 5e-037
gb|BP827616.1|BP827616 BP827616 RAFL19 Arabidopsis thaliana... 73 6e-037
gb|T21082.1|T21082 3090 Lambda-PRL2 Arabidopsis thaliana cD... 156 7e-037
gb|BP567003.1|BP567003 BP567003 RAFL14 Arabidopsis thaliana... 156 7e-037
gb|BP631221.1|BP631221 BP631221 RAFL17 Arabidopsis thaliana... 156 1e-036
gb|BP643383.1|BP643383 BP643383 RAFL19 Arabidopsis thaliana... 104 1e-036
gb|BP822697.1|BP822697 BP822697 RAFL19 Arabidopsis thaliana... 101 1e-036
gb|BP819871.1|BP819871 BP819871 RAFL19 Arabidopsis thaliana... 97 2e-036
gb|BP571926.1|BP571926 BP571926 RAFL14 Arabidopsis thaliana... 155 3e-036
gb|AV803160.1|AV803160 AV803160 RAFL9 Arabidopsis thaliana ... 154 4e-036
gb|BP578804.1|BP578804 BP578804 RAFL14 Arabidopsis thaliana... 117 1e-035
gb|AV815515.1|AV815515 AV815515 RAFL9 Arabidopsis thaliana ... 127 1e-035
gb|AV792990.1|AV792990 AV792990 RAFL7 Arabidopsis thaliana ... 152 2e-035
gb|AV812697.1|AV812697 AV812697 RAFL9 Arabidopsis thaliana ... 152 2e-035
gb|BP795490.1|BP795490 BP795490 RAFL7 Arabidopsis thaliana ... 152 2e-035
gb|BP855610.1|BP855610 BP855610 RAFL21 Arabidopsis thaliana... 126 2e-035
gb|BP595871.1|BP595871 BP595871 RAFL15 Arabidopsis thaliana... 125 3e-035
gb|BP801663.1|BP801663 BP801663 RAFL14 Arabidopsis thaliana... 86 4e-035
gb|BP576468.1|BP576468 BP576468 RAFL14 Arabidopsis thaliana... 150 5e-035
gb|BP783315.1|BP783315 BP783315 RAFL7 Arabidopsis thaliana ... 150 6e-035
gb|BP638690.1|BP638690 BP638690 RAFL19 Arabidopsis thaliana... 149 9e-035
gb|BP571303.1|BP571303 BP571303 RAFL14 Arabidopsis thaliana... 149 1e-034
gb|BP656658.1|BP656658 BP656658 RAFL19 Arabidopsis thaliana... 149 1e-034
gb|BP815320.1|BP815320 BP815320 RAFL19 Arabidopsis thaliana... 83 2e-034
gb|AV789547.1|AV789547 AV789547 RAFL6 Arabidopsis thaliana ... 148 2e-034
gb|BP595302.1|BP595302 BP595302 RAFL15 Arabidopsis thaliana... 64 4e-034
gb|BP803264.1|BP803264 BP803264 RAFL14 Arabidopsis thaliana... 111 1e-033
gb|BP574678.1|BP574678 BP574678 RAFL14 Arabidopsis thaliana... 146 1e-033
gb|BP649946.1|BP649946 BP649946 RAFL19 Arabidopsis thaliana... 86 2e-033
gb|BP839479.1|BP839479 BP839479 RAFL19 Arabidopsis thaliana... 116 2e-033
gb|T13864.1|T13864 2029 Lambda-PRL2 Arabidopsis thaliana cD... 144 4e-033
gb|BP611180.1|BP611180 BP611180 RAFL16 Arabidopsis thaliana... 85 7e-033
gb|BP659553.1|BP659553 BP659553 RAFL19 Arabidopsis thaliana... 98 7e-033
gb|BP573703.1|BP573703 BP573703 RAFL14 Arabidopsis thaliana... 143 7e-033
gb|BP647250.1|BP647250 BP647250 RAFL19 Arabidopsis thaliana... 120 1e-032
gb|BP657518.1|BP657518 BP657518 RAFL19 Arabidopsis thaliana... 93 1e-032
gb|BP839970.1|BP839970 BP839970 RAFL19 Arabidopsis thaliana... 86 1e-032
gb|BP812235.1|BP812235 BP812235 RAFL19 Arabidopsis thaliana... 63 2e-032
gb|BP583356.1|BP583356 BP583356 RAFL14 Arabidopsis thaliana... 102 2e-032
gb|BP569056.1|BP569056 BP569056 RAFL14 Arabidopsis thaliana... 83 2e-032
gb|BP601934.1|BP601934 BP601934 RAFL16 Arabidopsis thaliana... 84 3e-032
gb|BP851981.1|BP851981 BP851981 RAFL21 Arabidopsis thaliana... 111 6e-032
gb|BP583363.1|BP583363 BP583363 RAFL14 Arabidopsis thaliana... 118 9e-032
gb|BP563794.1|BP563794 BP563794 RAFL14 Arabidopsis thaliana... 93 9e-032
emb|BX533607.1| Arabidopsis thaliana T-DNA flanking sequenc... 122 1e-031
gb|CF773255.1|CF773255 AG_FSL_14G11 Arabidopsis ag-1 35S:AG... 139 1e-031
gb|BP576513.1|BP576513 BP576513 RAFL14 Arabidopsis thaliana... 90 1e-031
gb|BP634722.1|BP634722 BP634722 RAFL17 Arabidopsis thaliana... 104 2e-031
gb|BP826828.1|BP826828 BP826828 RAFL19 Arabidopsis thaliana... 62 3e-031
gb|BP590033.1|BP590033 BP590033 RAFL15 Arabidopsis thaliana... 115 4e-031
gb|BP804604.1|BP804604 BP804604 RAFL16 Arabidopsis thaliana... 111 5e-031
gb|BP629963.1|BP629963 BP629963 RAFL17 Arabidopsis thaliana... 137 6e-031
gb|BP647593.1|BP647593 BP647593 RAFL19 Arabidopsis thaliana... 78 7e-031
gb|BP574142.1|BP574142 BP574142 RAFL14 Arabidopsis thaliana... 135 2e-030
gb|BP567844.1|BP567844 BP567844 RAFL14 Arabidopsis thaliana... 135 2e-030
gb|BP569257.1|BP569257 BP569257 RAFL14 Arabidopsis thaliana... 129 4e-030
gb|BP564828.1|BP564828 BP564828 RAFL14 Arabidopsis thaliana... 122 4e-030
gb|BP589707.1|BP589707 BP589707 RAFL15 Arabidopsis thaliana... 104 5e-030
gb|BP803757.1|BP803757 BP803757 RAFL14 Arabidopsis thaliana... 109 7e-030
gb|BP604569.1|BP604569 BP604569 RAFL16 Arabidopsis thaliana... 133 8e-030
gb|BP665046.1|BP665046 BP665046 RAFL21 Arabidopsis thaliana... 96 1e-029
gb|BP570153.1|BP570153 BP570153 RAFL14 Arabidopsis thaliana... 127 2e-029
gb|BP801190.1|BP801190 BP801190 RAFL14 Arabidopsis thaliana... 112 3e-029
gb|BP630794.1|BP630794 BP630794 RAFL17 Arabidopsis thaliana... 131 4e-029
gb|BP631002.1|BP631002 BP631002 RAFL17 Arabidopsis thaliana... 79 8e-029
gb|BP581456.1|BP581456 BP581456 RAFL14 Arabidopsis thaliana... 125 9e-029
gb|BP636075.1|BP636075 BP636075 RAFL18 Arabidopsis thaliana... 115 9e-029
gb|BP629322.1|BP629322 BP629322 RAFL17 Arabidopsis thaliana... 103 9e-029
gb|BP824901.1|BP824901 BP824901 RAFL19 Arabidopsis thaliana... 56 1e-028
gb|BP630836.1|BP630836 BP630836 RAFL17 Arabidopsis thaliana... 129 1e-028
gb|BP641460.1|BP641460 BP641460 RAFL19 Arabidopsis thaliana... 62 2e-028
gb|B24608.1|B24608 F21A19TF IGF Arabidopsis thaliana genomi... 81 6e-028
gb|BP591647.1|BP591647 BP591647 RAFL15 Arabidopsis thaliana... 74 6e-028
gb|CF774080.1|CF774080 AG_FSL_27B02 Arabidopsis ag-1 35S:AG... 118 3e-027
gb|BP593635.1|BP593635 BP593635 RAFL15 Arabidopsis thaliana... 83 3e-027
gb|BP632442.1|BP632442 BP632442 RAFL17 Arabidopsis thaliana... 121 3e-027
gb|BP670710.1|BP670710 BP670710 RAFL21 Arabidopsis thaliana... 81 4e-027
gb|Z17549.1|Z17549 ATTS0123 AC16H Arabidopsis thaliana cDNA... 124 5e-027
gb|BP659409.1|BP659409 BP659409 RAFL19 Arabidopsis thaliana... 114 5e-027
gb|BP586950.1|BP586950 BP586950 RAFL15 Arabidopsis thaliana... 123 9e-027
gb|BP649530.1|BP649530 BP649530 RAFL19 Arabidopsis thaliana... 123 9e-027
gb|N97136.1|N97136 22315 Lambda-PRL2 Arabidopsis thaliana c... 112 1e-026
gb|BZ381580.1|BZ381580 SALK_116957.51.75.x Arabidopsis thal... 122 1e-026
gb|CC888027.1|CC888027 SALK_151173.46.20.x Arabidopsis thal... 122 1e-026
gb|BP671465.1|BP671465 BP671465 RAFL21 Arabidopsis thaliana... 122 2e-026
gb|BP566808.1|BP566808 BP566808 RAFL14 Arabidopsis thaliana... 119 1e-025
gb|BP564437.1|BP564437 BP564437 RAFL14 Arabidopsis thaliana... 102 1e-025
gb|CA781577.1|CA781577 024G01AF Infected Arabidopsis Leaf A... 90 8e-025
gb|BP602398.1|BP602398 BP602398 RAFL16 Arabidopsis thaliana... 87 1e-024
gb|BP583670.1|BP583670 BP583670 RAFL14 Arabidopsis thaliana... 116 1e-024
gb|BP644476.1|BP644476 BP644476 RAFL19 Arabidopsis thaliana... 115 2e-024
gb|BP656608.1|BP656608 BP656608 RAFL19 Arabidopsis thaliana... 70 2e-024
gb|BP633404.1|BP633404 BP633404 RAFL17 Arabidopsis thaliana... 111 5e-024
gb|BP575740.1|BP575740 BP575740 RAFL14 Arabidopsis thaliana... 81 2e-023
gb|B62040.1|B62040 T20B24TF TAMU Arabidopsis thaliana genom... 81 2e-023
gb|CL492521.1|CL492521 SAIL_567_G05.v1 SAIL Collection Arab... 111 2e-023
gb|AA597851.1|AA597851 29918 Lambda-PRL2 Arabidopsis thalia... 111 5e-023
gb|BZ381471.1|BZ381471 SALK_116765.30.95.n Arabidopsis thal... 110 6e-023
gb|BP664884.1|BP664884 BP664884 RAFL21 Arabidopsis thaliana... 110 6e-023
gb|BP667981.1|BP667981 BP667981 RAFL21 Arabidopsis thaliana... 107 6e-023
emb|BX531257.1| Arabidopsis thaliana T-DNA flanking sequenc... 66 9e-023
emb|BX531258.1| Arabidopsis thaliana T-DNA flanking sequenc... 66 9e-023
gb|BP639086.1|BP639086 BP639086 RAFL19 Arabidopsis thaliana... 101 2e-022
gb|CF653073.1|CF653073 94-L020167-066-001-L24-SP6P MPIZ-ADI... 107 4e-022
gb|AV789863.1|AV789863 AV789863 RAFL6 Arabidopsis thaliana ... 107 6e-022
gb|BP641877.1|BP641877 BP641877 RAFL19 Arabidopsis thaliana... 99 8e-022
gb|AV557800.1|AV557800 AV557800 Arabidopsis thaliana green ... 104 5e-021
gb|BP641898.1|BP641898 BP641898 RAFL19 Arabidopsis thaliana... 69 7e-021
gb|BP656927.1|BP656927 BP656927 RAFL19 Arabidopsis thaliana... 83 7e-021
gb|BP860503.1|BP860503 BP860503 RAFL21 Arabidopsis thaliana... 47 1e-020
>gb|AV825327.1|AV825327 AV825327 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-08-E24 5',
mRNA sequence
Length = 612
Score = 376 bits (816), Expect = e-103
Identities = 159/200 (79%), Positives = 178/200 (89%)
Frame = +2 / +2
Query: 74 APAGMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSK 253
A A MGIDL+AGG++KKTKRTAPKSDDVYLKLLVKLYRFLVRR+ SNFNAVILKRLFMSK
Sbjct: 2 ADAAMGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSK 181
Query: 254 TNRPPISMRRLVKFMEGKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAG 433
N+ P+S+ RLV+FM GK+ IAV+VGT+TDD R+ E+PAMKVTALRFTE ARARI AG
Sbjct: 182 VNKAPLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAG 361
Query: 434 GECLTFDQLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKA 613
GECLTFDQLALRAPLG+NTVLLRGPKN+REAV+HFG APGVPHS+TKPYVR KGRKFEKA
Sbjct: 362 GECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFEKA 541
Query: 614 RGRRNSRGFKV*NKLWPSVL 673
RG+R SRGFKV* + VL
Sbjct: 542 RGKRKSRGFKV*EDVSGFVL 601
Score = 205 bits (442), Expect(2) = 4e-056
Identities = 93/135 (68%), Positives = 102/135 (75%)
Frame = -3 / -1
Query: 648 *TLNPRLFLLPRAFSNFLPLERTYGLVWLCGTPGALPKCLTASRAFLGPLKRTVFSPSGA 469
*TLNPRLF P AFSNFLPL TYGLV LCGTPGA PKC TASR F GPL+RTVF P+GA
Sbjct: 576 *TLNPRLFRFPLAFSNFLPLCLTYGLVLLCGTPGAGPKCFTASREFFGPLRRTVFCPNGA 397
Query: 468 RRASWSNVRHSPPALTILALAVSVNLRAVTFIAGTSWILLSSVTVPTMTAMFFSFPSINL 289
RASWS V+HSPPA +ILALA+SVNL+AVTF+AG S L SSV VPT TA+ S P +N
Sbjct: 396 LRASWSKVKHSPPAFSILALALSVNLKAVTFMAGIS*TLKSSVIVPTNTAILSSLPVMNS 217
Query: 288 TRRRMEIGGRLVLLM 244
T E G L LLM
Sbjct: 216 TSLESERGALLTLLM 172
Score = 157 bits (337), Expect = 5e-037
Identities = 79/187 (42%), Positives = 109/187 (58%)
Frame = +1 / +1
Query: 115 E*EDQAHCAQV*RCLPQAPRQALPFLGQEDQEQFQRCHSQEAFHE*NQPTTNLHAPPCQV 294
E*EDQ C+ V CLP+A RQALP G+E +Q Q C S++AFHE +Q +++ C+V
Sbjct: 43 E*EDQKDCS*VR*CLPKASRQALPVFGEEI*QQLQCCDSEKAFHEQSQQSSSFTL*ACRV 222
Query: 295 YGRKGEEHCCHCWHSHR*QKDPGGSSNEGYCPEVHGDSKGQDCQCWWRVPHI*PACSSCS 474
+ +G + CC W+ H * + S +EGYC EV+ + G + + WWRV ++*PACS S
Sbjct: 223 HDWQG*QDCCVGWNYH**FESS*DSCHEGYCLEVY*EG*G*N*ESWWRVLNL*PACSQSS 402
Query: 475 TWREHGPLEGPQECP*GSEALWQGSWSAAQPHQAVCALQGKEVREGSWQEEQPWIQGLKQ 654
EH +E * SEA SW A Q H A+C GKEV E + ++ WIQGL++
Sbjct: 403 IGTEHSSS*RTKELA*SSEAFRTCSWCATQ*H*AIC*A*GKEV*ES*RKAKESWIQGLRR 582
Query: 655 IVALRVA 675
R A
Sbjct: 583 CFWXRFA 603
Score = 144 bits (308), Expect(2) = 3e-035
Identities = 67/151 (44%), Positives = 101/151 (66%)
Frame = -2 / -3
Query: 649 LNLESTAVPPATSLLELPSLGAHIRLGVAVRHSRSLAKVPHCLTGILGAPQEDRVLAKWS 470
L+LEST + ++S L+LPSL +I L V V H+RS +++ HC T +L + +++ VL++WS
Sbjct: 577 LDLESTTLSLSSSFLKLPSLMPNIWLSVTVWHTRSRSEMLHCFTRVLWSSKKNCVLSQWS 398
Query: 469 TKSKLVKCEALATSIDNPGPCCLREPQGSNLHCWNLLDPFVICDCANNDSNVLLLSFHKL 290
++SKLVK AL+TS N P L +PQGSNLH NL++ +I D +N SN+++L+ H+L
Sbjct: 397 SESKLVKG*ALSTSFLNSSPSPLSKPQGSNLHGRNLMNSQIISDSSNQHSNLVILASHEL 218
Query: 289 DKAAHGDWWSVGFTHEKPLENDSVEIALGPP 197
K V F HEKP +N S+E+A+ P
Sbjct: 217 YKPRE*KRSFVDFAHEKPFQNHSIEVAVRSP 125
Score = 35.9 bits (72), Expect(2) = 4e-056
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = -3 / -1
Query: 141 GAVRLVFLFLPPATRSIPI 85
GAV LVFL LPPA RSIP+
Sbjct: 69 GAVLLVFLLLPPAIRSIPM 13
Score = 27.6 bits (54), Expect(2) = 3e-035
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -2 / -3
Query: 136 SALGLLIPPTGDEVDTHSCGC 74
S GLL + D++DTH C C
Sbjct: 64 SPFGLLTLTSCDKIDTHGCVC 2
>gb|AY056141.1| Arabidopsis thaliana putative 60S ribosomal protein (At5g27850)
mRNA, complete cds
Length = 893
Score = 376 bits (816), Expect = e-103
Identities = 157/196 (80%), Positives = 177/196 (90%)
Frame = +2 / +1
Query: 74 APAGMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSK 253
A A MGIDL+AGG++KKTKRTAPKSDDVYLKLLVKLYRFLVRR+ SNFNAVILKRLFMSK
Sbjct: 1 ADAAMGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSK 180
Query: 254 TNRPPISMRRLVKFMEGKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAG 433
N+ P+S+ RLV+FM GK+ IAV+VGT+TDD R+ E+PAMKVTALRFTE ARARI AG
Sbjct: 181 VNKAPLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAG 360
Query: 434 GECLTFDQLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKA 613
GECLTFDQLALRAPLG+NTVLLRGPKN+REAV+HFG APGVPHS+TKPYVR KGRKFEKA
Sbjct: 361 GECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFEKA 540
Query: 614 RGRRNSRGFKV*NKLW 661
RG+R SRGFKV* ++
Sbjct: 541 RGKRKSRGFKV*EDVF 588
Score = 205 bits (442), Expect(2) = 4e-056
Identities = 93/135 (68%), Positives = 102/135 (75%)
Frame = -3 / -1
Query: 648 *TLNPRLFLLPRAFSNFLPLERTYGLVWLCGTPGALPKCLTASRAFLGPLKRTVFSPSGA 469
*TLNPRLF P AFSNFLPL TYGLV LCGTPGA PKC TASR F GPL+RTVF P+GA
Sbjct: 575 *TLNPRLFRFPLAFSNFLPLCLTYGLVLLCGTPGAGPKCFTASREFFGPLRRTVFCPNGA 396
Query: 468 RRASWSNVRHSPPALTILALAVSVNLRAVTFIAGTSWILLSSVTVPTMTAMFFSFPSINL 289
RASWS V+HSPPA +ILALA+SVNL+AVTF+AG S L SSV VPT TA+ S P +N
Sbjct: 395 LRASWSKVKHSPPAFSILALALSVNLKAVTFMAGIS*TLKSSVIVPTNTAILSSLPVMNS 216
Query: 288 TRRRMEIGGRLVLLM 244
T E G L LLM
Sbjct: 215 TSLESERGALLTLLM 171
Score = 156 bits (335), Expect = 1e-036
Identities = 77/180 (42%), Positives = 107/180 (59%)
Frame = +1 / +3
Query: 115 E*EDQAHCAQV*RCLPQAPRQALPFLGQEDQEQFQRCHSQEAFHE*NQPTTNLHAPPCQV 294
E*EDQ C+ V CLP+A RQALP G+E +Q Q C S++AFHE +Q +++ C+V
Sbjct: 42 E*EDQKDCS*VR*CLPKASRQALPVFGEEI*QQLQCCDSEKAFHEQSQQSSSFTL*ACRV 221
Query: 295 YGRKGEEHCCHCWHSHR*QKDPGGSSNEGYCPEVHGDSKGQDCQCWWRVPHI*PACSSCS 474
+ +G + CC W+ H * + S +EGYC EV+ + G + + WWRV ++*PACS S
Sbjct: 222 HDWQG*QDCCVGWNYH**FESS*DSCHEGYCLEVY*EG*G*N*ESWWRVLNL*PACSQSS 401
Query: 475 TWREHGPLEGPQECP*GSEALWQGSWSAAQPHQAVCALQGKEVREGSWQEEQPWIQGLKQ 654
EH +E * SEA SW A Q H A+C GKEV E + ++ WIQGL++
Sbjct: 402 IGTEHSSS*RTKELA*SSEAFRTCSWCATQ*H*AIC*A*GKEV*ES*RKAKESWIQGLRR 581
Score = 144 bits (308), Expect(2) = 3e-035
Identities = 67/151 (44%), Positives = 101/151 (66%)
Frame = -2 / -3
Query: 649 LNLESTAVPPATSLLELPSLGAHIRLGVAVRHSRSLAKVPHCLTGILGAPQEDRVLAKWS 470
L+LEST + ++S L+LPSL +I L V V H+RS +++ HC T +L + +++ VL++WS
Sbjct: 576 LDLESTTLSLSSSFLKLPSLMPNIWLSVTVWHTRSRSEMLHCFTRVLWSSKKNCVLSQWS 397
Query: 469 TKSKLVKCEALATSIDNPGPCCLREPQGSNLHCWNLLDPFVICDCANNDSNVLLLSFHKL 290
++SKLVK AL+TS N P L +PQGSNLH NL++ +I D +N SN+++L+ H+L
Sbjct: 396 SESKLVKG*ALSTSFLNSSPSPLSKPQGSNLHGRNLMNSQIISDSSNQHSNLVILASHEL 217
Query: 289 DKAAHGDWWSVGFTHEKPLENDSVEIALGPP 197
K V F HEKP +N S+E+A+ P
Sbjct: 216 YKPRE*KRSFVDFAHEKPFQNHSIEVAVRSP 124
Score = 35.9 bits (72), Expect(2) = 4e-056
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = -3 / -1
Query: 141 GAVRLVFLFLPPATRSIPI 85
GAV LVFL LPPA RSIP+
Sbjct: 68 GAVLLVFLLLPPAIRSIPM 12
Score = 27.6 bits (54), Expect(2) = 3e-035
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -2 / -3
Query: 136 SALGLLIPPTGDEVDTHSCGC 74
S GLL + D++DTH C C
Sbjct: 63 SPFGLLTLTSCDKIDTHGCVC 1
>gb|BT000711.1| Arabidopsis thaliana clone RAFL09-17-C05 (R09425) putative 60S
ribosomal protein (At5g27850) mRNA, complete cds
Length = 775
Score = 376 bits (816), Expect = e-103
Identities = 157/196 (80%), Positives = 177/196 (90%)
Frame = +2 / +1
Query: 74 APAGMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSK 253
A A MGIDL+AGG++KKTKRTAPKSDDVYLKLLVKLYRFLVRR+ SNFNAVILKRLFMSK
Sbjct: 1 ADAAMGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSK 180
Query: 254 TNRPPISMRRLVKFMEGKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAG 433
N+ P+S+ RLV+FM GK+ IAV+VGT+TDD R+ E+PAMKVTALRFTE ARARI AG
Sbjct: 181 VNKAPLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAG 360
Query: 434 GECLTFDQLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKA 613
GECLTFDQLALRAPLG+NTVLLRGPKN+REAV+HFG APGVPHS+TKPYVR KGRKFEKA
Sbjct: 361 GECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFEKA 540
Query: 614 RGRRNSRGFKV*NKLW 661
RG+R SRGFKV* ++
Sbjct: 541 RGKRKSRGFKV*EDVF 588
Score = 205 bits (442), Expect(2) = 4e-056
Identities = 93/135 (68%), Positives = 102/135 (75%)
Frame = -3 / -3
Query: 648 *TLNPRLFLLPRAFSNFLPLERTYGLVWLCGTPGALPKCLTASRAFLGPLKRTVFSPSGA 469
*TLNPRLF P AFSNFLPL TYGLV LCGTPGA PKC TASR F GPL+RTVF P+GA
Sbjct: 575 *TLNPRLFRFPLAFSNFLPLCLTYGLVLLCGTPGAGPKCFTASREFFGPLRRTVFCPNGA 396
Query: 468 RRASWSNVRHSPPALTILALAVSVNLRAVTFIAGTSWILLSSVTVPTMTAMFFSFPSINL 289
RASWS V+HSPPA +ILALA+SVNL+AVTF+AG S L SSV VPT TA+ S P +N
Sbjct: 395 LRASWSKVKHSPPAFSILALALSVNLKAVTFMAGIS*TLKSSVIVPTNTAILSSLPVMNS 216
Query: 288 TRRRMEIGGRLVLLM 244
T E G L LLM
Sbjct: 215 TSLESERGALLTLLM 171
Score = 156 bits (335), Expect = 1e-036
Identities = 77/180 (42%), Positives = 107/180 (59%)
Frame = +1 / +3
Query: 115 E*EDQAHCAQV*RCLPQAPRQALPFLGQEDQEQFQRCHSQEAFHE*NQPTTNLHAPPCQV 294
E*EDQ C+ V CLP+A RQALP G+E +Q Q C S++AFHE +Q +++ C+V
Sbjct: 42 E*EDQKDCS*VR*CLPKASRQALPVFGEEI*QQLQCCDSEKAFHEQSQQSSSFTL*ACRV 221
Query: 295 YGRKGEEHCCHCWHSHR*QKDPGGSSNEGYCPEVHGDSKGQDCQCWWRVPHI*PACSSCS 474
+ +G + CC W+ H * + S +EGYC EV+ + G + + WWRV ++*PACS S
Sbjct: 222 HDWQG*QDCCVGWNYH**FESS*DSCHEGYCLEVY*EG*G*N*ESWWRVLNL*PACSQSS 401
Query: 475 TWREHGPLEGPQECP*GSEALWQGSWSAAQPHQAVCALQGKEVREGSWQEEQPWIQGLKQ 654
EH +E * SEA SW A Q H A+C GKEV E + ++ WIQGL++
Sbjct: 402 IGTEHSSS*RTKELA*SSEAFRTCSWCATQ*H*AIC*A*GKEV*ES*RKAKESWIQGLRR 581
Score = 144 bits (308), Expect(2) = 3e-035
Identities = 67/151 (44%), Positives = 101/151 (66%)
Frame = -2 / -2
Query: 649 LNLESTAVPPATSLLELPSLGAHIRLGVAVRHSRSLAKVPHCLTGILGAPQEDRVLAKWS 470
L+LEST + ++S L+LPSL +I L V V H+RS +++ HC T +L + +++ VL++WS
Sbjct: 576 LDLESTTLSLSSSFLKLPSLMPNIWLSVTVWHTRSRSEMLHCFTRVLWSSKKNCVLSQWS 397
Query: 469 TKSKLVKCEALATSIDNPGPCCLREPQGSNLHCWNLLDPFVICDCANNDSNVLLLSFHKL 290
++SKLVK AL+TS N P L +PQGSNLH NL++ +I D +N SN+++L+ H+L
Sbjct: 396 SESKLVKG*ALSTSFLNSSPSPLSKPQGSNLHGRNLMNSQIISDSSNQHSNLVILASHEL 217
Query: 289 DKAAHGDWWSVGFTHEKPLENDSVEIALGPP 197
K V F HEKP +N S+E+A+ P
Sbjct: 216 YKPRE*KRSFVDFAHEKPFQNHSIEVAVRSP 124
Score = 35.9 bits (72), Expect(2) = 4e-056
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = -3 / -3
Query: 141 GAVRLVFLFLPPATRSIPI 85
GAV LVFL LPPA RSIP+
Sbjct: 68 GAVLLVFLLLPPAIRSIPM 12
Score = 27.6 bits (54), Expect(2) = 3e-035
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -2 / -2
Query: 136 SALGLLIPPTGDEVDTHSCGC 74
S GLL + D++DTH C C
Sbjct: 63 SPFGLLTLTSCDKIDTHGCVC 1
>ref|NM_122667.2| Arabidopsis thaliana structural constituent of ribosome AT5G27850
mRNA, complete cds
Length = 878
Score = 376 bits (816), Expect = e-103
Identities = 157/196 (80%), Positives = 177/196 (90%)
Frame = +2 / +2
Query: 74 APAGMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSK 253
A A MGIDL+AGG++KKTKRTAPKSDDVYLKLLVKLYRFLVRR+ SNFNAVILKRLFMSK
Sbjct: 2 ADAAMGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSK 181
Query: 254 TNRPPISMRRLVKFMEGKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAG 433
N+ P+S+ RLV+FM GK+ IAV+VGT+TDD R+ E+PAMKVTALRFTE ARARI AG
Sbjct: 182 VNKAPLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAG 361
Query: 434 GECLTFDQLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKA 613
GECLTFDQLALRAPLG+NTVLLRGPKN+REAV+HFG APGVPHS+TKPYVR KGRKFEKA
Sbjct: 362 GECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFEKA 541
Query: 614 RGRRNSRGFKV*NKLW 661
RG+R SRGFKV* ++
Sbjct: 542 RGKRKSRGFKV*EDVF 589
Score = 205 bits (442), Expect(2) = 4e-056
Identities = 93/135 (68%), Positives = 102/135 (75%)
Frame = -3 / -3
Query: 648 *TLNPRLFLLPRAFSNFLPLERTYGLVWLCGTPGALPKCLTASRAFLGPLKRTVFSPSGA 469
*TLNPRLF P AFSNFLPL TYGLV LCGTPGA PKC TASR F GPL+RTVF P+GA
Sbjct: 576 *TLNPRLFRFPLAFSNFLPLCLTYGLVLLCGTPGAGPKCFTASREFFGPLRRTVFCPNGA 397
Query: 468 RRASWSNVRHSPPALTILALAVSVNLRAVTFIAGTSWILLSSVTVPTMTAMFFSFPSINL 289
RASWS V+HSPPA +ILALA+SVNL+AVTF+AG S L SSV VPT TA+ S P +N
Sbjct: 396 LRASWSKVKHSPPAFSILALALSVNLKAVTFMAGIS*TLKSSVIVPTNTAILSSLPVMNS 217
Query: 288 TRRRMEIGGRLVLLM 244
T E G L LLM
Sbjct: 216 TSLESERGALLTLLM 172
Score = 156 bits (335), Expect = 1e-036
Identities = 77/180 (42%), Positives = 107/180 (59%)
Frame = +1 / +1
Query: 115 E*EDQAHCAQV*RCLPQAPRQALPFLGQEDQEQFQRCHSQEAFHE*NQPTTNLHAPPCQV 294
E*EDQ C+ V CLP+A RQALP G+E +Q Q C S++AFHE +Q +++ C+V
Sbjct: 43 E*EDQKDCS*VR*CLPKASRQALPVFGEEI*QQLQCCDSEKAFHEQSQQSSSFTL*ACRV 222
Query: 295 YGRKGEEHCCHCWHSHR*QKDPGGSSNEGYCPEVHGDSKGQDCQCWWRVPHI*PACSSCS 474
+ +G + CC W+ H * + S +EGYC EV+ + G + + WWRV ++*PACS S
Sbjct: 223 HDWQG*QDCCVGWNYH**FESS*DSCHEGYCLEVY*EG*G*N*ESWWRVLNL*PACSQSS 402
Query: 475 TWREHGPLEGPQECP*GSEALWQGSWSAAQPHQAVCALQGKEVREGSWQEEQPWIQGLKQ 654
EH +E * SEA SW A Q H A+C GKEV E + ++ WIQGL++
Sbjct: 403 IGTEHSSS*RTKELA*SSEAFRTCSWCATQ*H*AIC*A*GKEV*ES*RKAKESWIQGLRR 582
Score = 144 bits (308), Expect(2) = 3e-035
Identities = 67/151 (44%), Positives = 101/151 (66%)
Frame = -2 / -2
Query: 649 LNLESTAVPPATSLLELPSLGAHIRLGVAVRHSRSLAKVPHCLTGILGAPQEDRVLAKWS 470
L+LEST + ++S L+LPSL +I L V V H+RS +++ HC T +L + +++ VL++WS
Sbjct: 577 LDLESTTLSLSSSFLKLPSLMPNIWLSVTVWHTRSRSEMLHCFTRVLWSSKKNCVLSQWS 398
Query: 469 TKSKLVKCEALATSIDNPGPCCLREPQGSNLHCWNLLDPFVICDCANNDSNVLLLSFHKL 290
++SKLVK AL+TS N P L +PQGSNLH NL++ +I D +N SN+++L+ H+L
Sbjct: 397 SESKLVKG*ALSTSFLNSSPSPLSKPQGSNLHGRNLMNSQIISDSSNQHSNLVILASHEL 218
Query: 289 DKAAHGDWWSVGFTHEKPLENDSVEIALGPP 197
K V F HEKP +N S+E+A+ P
Sbjct: 217 YKPRE*KRSFVDFAHEKPFQNHSIEVAVRSP 125
Score = 35.9 bits (72), Expect(2) = 4e-056
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = -3 / -3
Query: 141 GAVRLVFLFLPPATRSIPI 85
GAV LVFL LPPA RSIP+
Sbjct: 69 GAVLLVFLLLPPAIRSIPM 13
Score = 27.6 bits (54), Expect(2) = 3e-035
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -2 / -2
Query: 136 SALGLLIPPTGDEVDTHSCGC 74
S GLL + D++DTH C C
Sbjct: 64 SPFGLLTLTSCDKIDTHGCVC 2
>gb|U15741.1|ATU15741 Arabidopsis thaliana cytoplasmic ribosomal protein L18 mRNA,
complete cds
Length = 778
Score = 374 bits (812), Expect = e-102
Identities = 157/196 (80%), Positives = 173/196 (88%)
Frame = +2 / +3
Query: 62 PSAAAPAGMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRL 241
PS MGIDL+AGG++KKTKRTAPKSDDVYLKL VKLYRFLVRRT S FN VILKRL
Sbjct: 3 PSPQRRTTMGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRL 182
Query: 242 FMSKTNRPPISMRRLVKFMEGKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARI 421
FMSK NR P+S+ RLV+FM GKE IAV+VGT+TDD R+ E+PAMKVTALRFTE ARARI
Sbjct: 183 FMSKVNRAPLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARI 362
Query: 422 VNAGGECLTFDQLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRK 601
AGGECLTFDQLALRAPLG+NTVLLRGPKN+REAV+HFG APGVPHSH+KPYVR+KGRK
Sbjct: 363 EKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRK 542
Query: 602 FEKARGRRNSRGFKV* 649
FEKARG+R SRGFKV*
Sbjct: 543 FEKARGKRKSRGFKV* 590
Score = 207 bits (446), Expect(2) = 4e-057
Identities = 94/137 (68%), Positives = 104/137 (75%)
Frame = -3 / -1
Query: 654 LF*TLNPRLFLLPRAFSNFLPLERTYGLVWLCGTPGALPKCLTASRAFLGPLKRTVFSPS 475
L *TLNPRLFL P AFSNFLPL RTYGL LCGTPGA PKC TASR FLGPL+RTVF P+
Sbjct: 595 LS*TLNPRLFLFPLAFSNFLPLARTYGLE*LCGTPGAGPKCFTASREFLGPLRRTVFWPN 416
Query: 474 GARRASWSNVRHSPPALTILALAVSVNLRAVTFIAGTSWILLSSVTVPTMTAMFFSFPSI 295
GA RASWS V+HSPPA ++ ALA+SVNL+AVTF+AG S L SSV VPT TA+ S P +
Sbjct: 415 GALRASWSKVKHSPPAFSMRALALSVNLKAVTFMAGISCTLKSSVIVPTKTAILSSLPVM 236
Query: 294 NLTRRRMEIGGRLVLLM 244
N T E G L LLM
Sbjct: 235 NSTSLDRERGALLTLLM 185
Score = 164 bits (353), Expect = 3e-039
Identities = 73/151 (48%), Positives = 103/151 (68%)
Frame = -2 / -3
Query: 649 LNLESTAVPPATSLLELPSLGAHIRLGVAVRHSRSLAKVPHCLTGILGAPQEDRVLAKWS 470
LNLEST +P ++ LLELPSLG +I LGV V H+RS +++ HC T IL + +++RVLA+WS
Sbjct: 590 LNLESTTLPLSSGLLELPSLGPNIWLGVTVWHTRSRSEMLHCFT*ILRSSKKNRVLAQWS 411
Query: 469 TKSKLVKCEALATSIDNPGPCCLREPQGSNLHCWNLLDPFVICDCANNDSNVLLLSFHKL 290
++S+LVK A +S N PC L EPQGS+ H WNL+ P +I +N D N++ L+ H+L
Sbjct: 410 SESELVKG*AFTSSFLNASPCSLCEPQGSHFHGWNLVYPQIISYSSNQDGNLIFLASHEL 231
Query: 289 DKAAHGDWWSVGFTHEKPLENDSVEIALGPP 197
K SV F HEKPL+ ++E+A+ P
Sbjct: 230 HKPR*RKRSSVDFAHEKPLQYHTIELAISSP 138
Score = 147 bits (316), Expect = 4e-034
Identities = 79/182 (43%), Positives = 107/182 (58%)
Frame = +1 / +2
Query: 115 E*EDQAHCAQV*RCLPQAPRQALPFLGQEDQEQFQRCHSQEAFHE*NQPTTNLHAPPCQV 294
E*EDQ ++V* CLPQA QALP G+E+ Q Q C +EAFHE +Q +++ C V
Sbjct: 56 E*EDQKDSSKV**CLPQAYCQALPVSGKEN**QVQWCDIEEAFHEQSQQSSSFSI*ACGV 235
Query: 295 YGRKGEEHCCHCWHSHR*QKDPGGSSNEGYCPEVHGDSKGQDCQCWWRVPHI*PACSSCS 474
+ +G C W+ + * + SS+E C EVH +SKG + W + ++*PA S S
Sbjct: 236 HDWQGR*DCRLGWNYN**FEGTRDSSHESDCLEVHRESKGSH*ESWR*MLNL*PARSQSS 415
Query: 475 TWREHGPLEGPQECP*GSEALWQGSWSAAQPHQAVCALQGKEVREGSWQEEQPWIQGLKQ 654
EHG E * SEA SW A Q QA+C+ QGKEVREG +EE+ WIQGL++
Sbjct: 416 IGPEHGSS*RT*EFT*SSEAFRTCSWCATQSLQAICSGQGKEVREGQRKEEESWIQGLRK 595
Query: 655 IV 660
++
Sbjct: 596 LL 601
Score = 37.3 bits (75), Expect(2) = 4e-057
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = -3 / -1
Query: 141 GAVRLVFLFLPPATRSIPI 85
GAV LVFL LPPA RSIPI
Sbjct: 82 GAVLLVFLLLPPAIRSIPI 26
>gb|AV822119.1|AV822119 AV822119 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-01-F21 5',
mRNA sequence
Length = 660
Score = 373 bits (809), Expect = e-102
Identities = 156/196 (79%), Positives = 173/196 (88%)
Frame = +2 / +3
Query: 62 PSAAAPAGMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRL 241
PS MGIDL+AGG++KKTKRTAPKSDDVYLKL VKLYRFLVRRT S FN VILKRL
Sbjct: 9 PSPQRRTTMGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRL 188
Query: 242 FMSKTNRPPISMRRLVKFMEGKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARI 421
FMSK N+ P+S+ RLV+FM GKE IAV+VGT+TDD R+ E+PAMKVTALRFTE ARARI
Sbjct: 189 FMSKVNKAPLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARI 368
Query: 422 VNAGGECLTFDQLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRK 601
AGGECLTFDQLALRAPLG+NTVLLRGPKN+REAV+HFG APGVPHSH+KPYVR+KGRK
Sbjct: 369 EKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRK 548
Query: 602 FEKARGRRNSRGFKV* 649
FEKARG+R SRGFKV*
Sbjct: 549 FEKARGKRKSRGFKV* 596
Score = 207 bits (446), Expect(3) = 1e-060
Identities = 94/137 (68%), Positives = 104/137 (75%)
Frame = -3 / -3
Query: 654 LF*TLNPRLFLLPRAFSNFLPLERTYGLVWLCGTPGALPKCLTASRAFLGPLKRTVFSPS 475
L *TLNPRLFL P AFSNFLPL RTYGL LCGTPGA PKC TASR FLGPL+RTVF P+
Sbjct: 601 LS*TLNPRLFLFPLAFSNFLPLARTYGLE*LCGTPGAGPKCFTASREFLGPLRRTVFWPN 422
Query: 474 GARRASWSNVRHSPPALTILALAVSVNLRAVTFIAGTSWILLSSVTVPTMTAMFFSFPSI 295
GA RASWS V+HSPPA ++ ALA+SVNL+AVTF+AG S L SSV VPT TA+ S P +
Sbjct: 421 GALRASWSKVKHSPPAFSMRALALSVNLKAVTFMAGISCTLKSSVIVPTKTAILSSLPVM 242
Query: 294 NLTRRRMEIGGRLVLLM 244
N T E G L LLM
Sbjct: 241 NSTSLDRERGALLTLLM 191
Score = 147 bits (316), Expect = 4e-034
Identities = 79/182 (43%), Positives = 107/182 (58%)
Frame = +1 / +2
Query: 115 E*EDQAHCAQV*RCLPQAPRQALPFLGQEDQEQFQRCHSQEAFHE*NQPTTNLHAPPCQV 294
E*EDQ ++V* CLPQA QALP G+E+ Q Q C +EAFHE +Q +++ C V
Sbjct: 62 E*EDQKDSSKV**CLPQAYCQALPVSGKEN**QVQWCDIEEAFHEQSQQSSSFSI*ACGV 241
Query: 295 YGRKGEEHCCHCWHSHR*QKDPGGSSNEGYCPEVHGDSKGQDCQCWWRVPHI*PACSSCS 474
+ +G C W+ + * + SS+E C EVH +SKG + W + ++*PA S S
Sbjct: 242 HDWQGR*DCRLGWNYN**FEGTRDSSHESDCLEVHRESKGSH*ESWR*MLNL*PARSQSS 421
Query: 475 TWREHGPLEGPQECP*GSEALWQGSWSAAQPHQAVCALQGKEVREGSWQEEQPWIQGLKQ 654
EHG E * SEA SW A Q QA+C+ QGKEVREG +EE+ WIQGL++
Sbjct: 422 IGPEHGSS*RT*EFT*SSEAFRTCSWCATQSLQAICSGQGKEVREGQRKEEESWIQGLRK 601
Query: 655 IV 660
++
Sbjct: 602 LL 607
Score = 142 bits (304), Expect = 2e-032
Identities = 62/122 (50%), Positives = 87/122 (71%)
Frame = -2 / -2
Query: 649 LNLESTAVPPATSLLELPSLGAHIRLGVAVRHSRSLAKVPHCLTGILGAPQEDRVLAKWS 470
LNLEST +P ++ LLELPSLG +I LGV V H+RS +++ HC T IL + +++RVLA+WS
Sbjct: 596 LNLESTTLPLSSGLLELPSLGPNIWLGVTVWHTRSRSEMLHCFT*ILRSSKKNRVLAQWS 417
Query: 469 TKSKLVKCEALATSIDNPGPCCLREPQGSNLHCWNLLDPFVICDCANNDSNVLLLSFHKL 290
++S+LVK A +S N PC L EPQGS+ H WNL+ P +I +N D N++ L+ H+L
Sbjct: 416 SESELVKG*AFTSSFLNASPCSLCEPQGSHFHGWNLVYPQIISYSSNQDGNLIFLASHEL 237
Query: 289 DK 284
K
Sbjct: 236 HK 231
Score = 37.3 bits (75), Expect(3) = 1e-060
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = -3 / -3
Query: 141 GAVRLVFLFLPPATRSIPI 85
GAV LVFL LPPA RSIPI
Sbjct: 88 GAVLLVFLLLPPAIRSIPI 32
Score = 30.4 bits (60), Expect(3) = 1e-060
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2 / -2
Query: 259 VGFTHEKPLENDSVEIALGPP 197
V F HEKPL+ ++E+A+ P
Sbjct: 206 VDFAHEKPLQYHTIELAISSP 144
>gb|AY037224.1| Arabidopsis thaliana AT3g05590/F18C1_14 mRNA, complete cds
Length = 794
Score = 373 bits (809), Expect = e-102
Identities = 156/196 (79%), Positives = 173/196 (88%)
Frame = +2 / +2
Query: 62 PSAAAPAGMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRL 241
PS MGIDL+AGG++KKTKRTAPKSDDVYLKL VKLYRFLVRRT S FN VILKRL
Sbjct: 8 PSPQRRTTMGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRL 187
Query: 242 FMSKTNRPPISMRRLVKFMEGKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARI 421
FMSK N+ P+S+ RLV+FM GKE IAV+VGT+TDD R+ E+PAMKVTALRFTE ARARI
Sbjct: 188 FMSKVNKAPLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARI 367
Query: 422 VNAGGECLTFDQLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRK 601
AGGECLTFDQLALRAPLG+NTVLLRGPKN+REAV+HFG APGVPHSH+KPYVR+KGRK
Sbjct: 368 EKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRK 547
Query: 602 FEKARGRRNSRGFKV* 649
FEKARG+R SRGFKV*
Sbjct: 548 FEKARGKRKSRGFKV* 595
Score = 207 bits (446), Expect(3) = 1e-060
Identities = 94/137 (68%), Positives = 104/137 (75%)
Frame = -3 / -3
Query: 654 LF*TLNPRLFLLPRAFSNFLPLERTYGLVWLCGTPGALPKCLTASRAFLGPLKRTVFSPS 475
L *TLNPRLFL P AFSNFLPL RTYGL LCGTPGA PKC TASR FLGPL+RTVF P+
Sbjct: 600 LS*TLNPRLFLFPLAFSNFLPLARTYGLE*LCGTPGAGPKCFTASREFLGPLRRTVFWPN 421
Query: 474 GARRASWSNVRHSPPALTILALAVSVNLRAVTFIAGTSWILLSSVTVPTMTAMFFSFPSI 295
GA RASWS V+HSPPA ++ ALA+SVNL+AVTF+AG S L SSV VPT TA+ S P +
Sbjct: 420 GALRASWSKVKHSPPAFSMRALALSVNLKAVTFMAGISCTLKSSVIVPTKTAILSSLPVM 241
Query: 294 NLTRRRMEIGGRLVLLM 244
N T E G L LLM
Sbjct: 240 NSTSLDRERGALLTLLM 190
Score = 147 bits (316), Expect = 4e-034
Identities = 79/182 (43%), Positives = 107/182 (58%)
Frame = +1 / +1
Query: 115 E*EDQAHCAQV*RCLPQAPRQALPFLGQEDQEQFQRCHSQEAFHE*NQPTTNLHAPPCQV 294
E*EDQ ++V* CLPQA QALP G+E+ Q Q C +EAFHE +Q +++ C V
Sbjct: 61 E*EDQKDSSKV**CLPQAYCQALPVSGKEN**QVQWCDIEEAFHEQSQQSSSFSI*ACGV 240
Query: 295 YGRKGEEHCCHCWHSHR*QKDPGGSSNEGYCPEVHGDSKGQDCQCWWRVPHI*PACSSCS 474
+ +G C W+ + * + SS+E C EVH +SKG + W + ++*PA S S
Sbjct: 241 HDWQGR*DCRLGWNYN**FEGTRDSSHESDCLEVHRESKGSH*ESWR*MLNL*PARSQSS 420
Query: 475 TWREHGPLEGPQECP*GSEALWQGSWSAAQPHQAVCALQGKEVREGSWQEEQPWIQGLKQ 654
EHG E * SEA SW A Q QA+C+ QGKEVREG +EE+ WIQGL++
Sbjct: 421 IGPEHGSS*RT*EFT*SSEAFRTCSWCATQSLQAICSGQGKEVREGQRKEEESWIQGLRK 600
Query: 655 IV 660
++
Sbjct: 601 LL 606
Score = 142 bits (304), Expect = 2e-032
Identities = 62/122 (50%), Positives = 87/122 (71%)
Frame = -2 / -2
Query: 649 LNLESTAVPPATSLLELPSLGAHIRLGVAVRHSRSLAKVPHCLTGILGAPQEDRVLAKWS 470
LNLEST +P ++ LLELPSLG +I LGV V H+RS +++ HC T IL + +++RVLA+WS
Sbjct: 595 LNLESTTLPLSSGLLELPSLGPNIWLGVTVWHTRSRSEMLHCFT*ILRSSKKNRVLAQWS 416
Query: 469 TKSKLVKCEALATSIDNPGPCCLREPQGSNLHCWNLLDPFVICDCANNDSNVLLLSFHKL 290
++S+LVK A +S N PC L EPQGS+ H WNL+ P +I +N D N++ L+ H+L
Sbjct: 415 SESELVKG*AFTSSFLNASPCSLCEPQGSHFHGWNLVYPQIISYSSNQDGNLIFLASHEL 236
Query: 289 DK 284
K
Sbjct: 235 HK 230
Score = 37.3 bits (75), Expect(3) = 1e-060
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = -3 / -3
Query: 141 GAVRLVFLFLPPATRSIPI 85
GAV LVFL LPPA RSIPI
Sbjct: 87 GAVLLVFLLLPPAIRSIPI 31
Score = 30.4 bits (60), Expect(3) = 1e-060
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2 / -2
Query: 259 VGFTHEKPLENDSVEIALGPP 197
V F HEKPL+ ++E+A+ P
Sbjct: 205 VDFAHEKPLQYHTIELAISSP 143
>gb|AY122996.1| Arabidopsis thaliana putative 60S ribosomal protein (At5g27850)
mRNA, complete cds
Length = 595
Score = 373 bits (809), Expect = e-102
Identities = 155/192 (80%), Positives = 175/192 (91%)
Frame = +2 / +1
Query: 86 MGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP 265
MGIDL+AGG++KKTKRTAPKSDDVYLKLLVKLYRFLVRR+ SNFNAVILKRLFMSK N+
Sbjct: 1 MGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNKA 180
Query: 266 PISMRRLVKFMEGKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAGGECL 445
P+S+ RLV+FM GK+ IAV+VGT+TDD R+ E+PAMKVTALRFTE ARARI AGGECL
Sbjct: 181 PLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 360
Query: 446 TFDQLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRR 625
TFDQLALRAPLG+NTVLLRGPKN+REAV+HFG APGVPHS+TKPYVR KGRKFEKARG+R
Sbjct: 361 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFEKARGKR 540
Query: 626 NSRGFKV*NKLW 661
SRGFKV* ++
Sbjct: 541 KSRGFKV*EDVF 576
Score = 205 bits (442), Expect(2) = 6e-056
Identities = 93/135 (68%), Positives = 102/135 (75%)
Frame = -3 / -3
Query: 648 *TLNPRLFLLPRAFSNFLPLERTYGLVWLCGTPGALPKCLTASRAFLGPLKRTVFSPSGA 469
*TLNPRLF P AFSNFLPL TYGLV LCGTPGA PKC TASR F GPL+RTVF P+GA
Sbjct: 563 *TLNPRLFRFPLAFSNFLPLCLTYGLVLLCGTPGAGPKCFTASREFFGPLRRTVFCPNGA 384
Query: 468 RRASWSNVRHSPPALTILALAVSVNLRAVTFIAGTSWILLSSVTVPTMTAMFFSFPSINL 289
RASWS V+HSPPA +ILALA+SVNL+AVTF+AG S L SSV VPT TA+ S P +N
Sbjct: 383 LRASWSKVKHSPPAFSILALALSVNLKAVTFMAGIS*TLKSSVIVPTNTAILSSLPVMNS 204
Query: 288 TRRRMEIGGRLVLLM 244
T E G L LLM
Sbjct: 203 TSLESERGALLTLLM 159
Score = 156 bits (335), Expect = 1e-036
Identities = 77/180 (42%), Positives = 107/180 (59%)
Frame = +1 / +3
Query: 115 E*EDQAHCAQV*RCLPQAPRQALPFLGQEDQEQFQRCHSQEAFHE*NQPTTNLHAPPCQV 294
E*EDQ C+ V CLP+A RQALP G+E +Q Q C S++AFHE +Q +++ C+V
Sbjct: 30 E*EDQKDCS*VR*CLPKASRQALPVFGEEI*QQLQCCDSEKAFHEQSQQSSSFTL*ACRV 209
Query: 295 YGRKGEEHCCHCWHSHR*QKDPGGSSNEGYCPEVHGDSKGQDCQCWWRVPHI*PACSSCS 474
+ +G + CC W+ H * + S +EGYC EV+ + G + + WWRV ++*PACS S
Sbjct: 210 HDWQG*QDCCVGWNYH**FESS*DSCHEGYCLEVY*EG*G*N*ESWWRVLNL*PACSQSS 389
Query: 475 TWREHGPLEGPQECP*GSEALWQGSWSAAQPHQAVCALQGKEVREGSWQEEQPWIQGLKQ 654
EH +E * SEA SW A Q H A+C GKEV E + ++ WIQGL++
Sbjct: 390 IGTEHSSS*RTKELA*SSEAFRTCSWCATQ*H*AIC*A*GKEV*ES*RKAKESWIQGLRR 569
Score = 144 bits (308), Expect = 5e-033
Identities = 67/151 (44%), Positives = 101/151 (66%)
Frame = -2 / -2
Query: 649 LNLESTAVPPATSLLELPSLGAHIRLGVAVRHSRSLAKVPHCLTGILGAPQEDRVLAKWS 470
L+LEST + ++S L+LPSL +I L V V H+RS +++ HC T +L + +++ VL++WS
Sbjct: 564 LDLESTTLSLSSSFLKLPSLMPNIWLSVTVWHTRSRSEMLHCFTRVLWSSKKNCVLSQWS 385
Query: 469 TKSKLVKCEALATSIDNPGPCCLREPQGSNLHCWNLLDPFVICDCANNDSNVLLLSFHKL 290
++SKLVK AL+TS N P L +PQGSNLH NL++ +I D +N SN+++L+ H+L
Sbjct: 384 SESKLVKG*ALSTSFLNSSPSPLSKPQGSNLHGRNLMNSQIISDSSNQHSNLVILASHEL 205
Query: 289 DKAAHGDWWSVGFTHEKPLENDSVEIALGPP 197
K V F HEKP +N S+E+A+ P
Sbjct: 204 YKPRE*KRSFVDFAHEKPFQNHSIEVAVRSP 112
Score = 35.4 bits (71), Expect(2) = 6e-056
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -3 / -3
Query: 141 GAVRLVFLFLPPATRSIP 88
GAV LVFL LPPA RSIP
Sbjct: 56 GAVLLVFLLLPPAIRSIP 3
>ref|NM_111432.2| Arabidopsis thaliana RPL18 (RIBOSOMAL PROTEIN L18); structural
constituent of ribosome AT3G05590 (RPL18) mRNA, complete
cds
Length = 834
Score = 373 bits (809), Expect = e-102
Identities = 156/196 (79%), Positives = 173/196 (88%)
Frame = +2 / +2
Query: 62 PSAAAPAGMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRL 241
PS MGIDL+AGG++KKTKRTAPKSDDVYLKL VKLYRFLVRRT S FN VILKRL
Sbjct: 8 PSPQRRTTMGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRL 187
Query: 242 FMSKTNRPPISMRRLVKFMEGKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARI 421
FMSK N+ P+S+ RLV+FM GKE IAV+VGT+TDD R+ E+PAMKVTALRFTE ARARI
Sbjct: 188 FMSKVNKAPLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARI 367
Query: 422 VNAGGECLTFDQLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRK 601
AGGECLTFDQLALRAPLG+NTVLLRGPKN+REAV+HFG APGVPHSH+KPYVR+KGRK
Sbjct: 368 EKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRK 547
Query: 602 FEKARGRRNSRGFKV* 649
FEKARG+R SRGFKV*
Sbjct: 548 FEKARGKRKSRGFKV* 595
Score = 207 bits (446), Expect(3) = 1e-060
Identities = 94/137 (68%), Positives = 104/137 (75%)
Frame = -3 / -1
Query: 654 LF*TLNPRLFLLPRAFSNFLPLERTYGLVWLCGTPGALPKCLTASRAFLGPLKRTVFSPS 475
L *TLNPRLFL P AFSNFLPL RTYGL LCGTPGA PKC TASR FLGPL+RTVF P+
Sbjct: 600 LS*TLNPRLFLFPLAFSNFLPLARTYGLE*LCGTPGAGPKCFTASREFLGPLRRTVFWPN 421
Query: 474 GARRASWSNVRHSPPALTILALAVSVNLRAVTFIAGTSWILLSSVTVPTMTAMFFSFPSI 295
GA RASWS V+HSPPA ++ ALA+SVNL+AVTF+AG S L SSV VPT TA+ S P +
Sbjct: 420 GALRASWSKVKHSPPAFSMRALALSVNLKAVTFMAGISCTLKSSVIVPTKTAILSSLPVM 241
Query: 294 NLTRRRMEIGGRLVLLM 244
N T E G L LLM
Sbjct: 240 NSTSLDRERGALLTLLM 190
Score = 147 bits (316), Expect = 4e-034
Identities = 79/182 (43%), Positives = 107/182 (58%)
Frame = +1 / +1
Query: 115 E*EDQAHCAQV*RCLPQAPRQALPFLGQEDQEQFQRCHSQEAFHE*NQPTTNLHAPPCQV 294
E*EDQ ++V* CLPQA QALP G+E+ Q Q C +EAFHE +Q +++ C V
Sbjct: 61 E*EDQKDSSKV**CLPQAYCQALPVSGKEN**QVQWCDIEEAFHEQSQQSSSFSI*ACGV 240
Query: 295 YGRKGEEHCCHCWHSHR*QKDPGGSSNEGYCPEVHGDSKGQDCQCWWRVPHI*PACSSCS 474
+ +G C W+ + * + SS+E C EVH +SKG + W + ++*PA S S
Sbjct: 241 HDWQGR*DCRLGWNYN**FEGTRDSSHESDCLEVHRESKGSH*ESWR*MLNL*PARSQSS 420
Query: 475 TWREHGPLEGPQECP*GSEALWQGSWSAAQPHQAVCALQGKEVREGSWQEEQPWIQGLKQ 654
EHG E * SEA SW A Q QA+C+ QGKEVREG +EE+ WIQGL++
Sbjct: 421 IGPEHGSS*RT*EFT*SSEAFRTCSWCATQSLQAICSGQGKEVREGQRKEEESWIQGLRK 600
Query: 655 IV 660
++
Sbjct: 601 LL 606
Score = 142 bits (304), Expect = 2e-032
Identities = 62/122 (50%), Positives = 87/122 (71%)
Frame = -2 / -3
Query: 649 LNLESTAVPPATSLLELPSLGAHIRLGVAVRHSRSLAKVPHCLTGILGAPQEDRVLAKWS 470
LNLEST +P ++ LLELPSLG +I LGV V H+RS +++ HC T IL + +++RVLA+WS
Sbjct: 595 LNLESTTLPLSSGLLELPSLGPNIWLGVTVWHTRSRSEMLHCFT*ILRSSKKNRVLAQWS 416
Query: 469 TKSKLVKCEALATSIDNPGPCCLREPQGSNLHCWNLLDPFVICDCANNDSNVLLLSFHKL 290
++S+LVK A +S N PC L EPQGS+ H WNL+ P +I +N D N++ L+ H+L
Sbjct: 415 SESELVKG*AFTSSFLNASPCSLCEPQGSHFHGWNLVYPQIISYSSNQDGNLIFLASHEL 236
Query: 289 DK 284
K
Sbjct: 235 HK 230
Score = 37.3 bits (75), Expect(3) = 1e-060
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = -3 / -1
Query: 141 GAVRLVFLFLPPATRSIPI 85
GAV LVFL LPPA RSIPI
Sbjct: 87 GAVLLVFLLLPPAIRSIPI 31
Score = 30.4 bits (60), Expect(3) = 1e-060
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2 / -3
Query: 259 VGFTHEKPLENDSVEIALGPP 197
V F HEKPL+ ++E+A+ P
Sbjct: 205 VDFAHEKPLQYHTIELAISSP 143
>gb|AY060533.1| Arabidopsis thaliana AT3g05590/F18C1_14 mRNA, complete cds
Length = 564
Score = 371 bits (805), Expect = e-101
Identities = 154/188 (81%), Positives = 171/188 (90%)
Frame = +2 / +1
Query: 86 MGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP 265
MGIDL+AGG++KKTKRTAPKSDDVYLKL VKLYRFLVRRT S FN VILKRLFMSK N+
Sbjct: 1 MGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKVNKA 180
Query: 266 PISMRRLVKFMEGKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAGGECL 445
P+S+ RLV+FM GKE IAV+VGT+TDD R+ E+PAMKVTALRFTE ARARI AGGECL
Sbjct: 181 PLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 360
Query: 446 TFDQLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRR 625
TFDQLALRAPLG+NTVLLRGPKN+REAV+HFG APGVPHSH+KPYVR+KGRKFEKARG+R
Sbjct: 361 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKR 540
Query: 626 NSRGFKV* 649
SRGFKV*
Sbjct: 541 KSRGFKV* 564
Score = 206 bits (444), Expect(3) = 9e-060
Identities = 93/135 (68%), Positives = 103/135 (76%)
Frame = -3 / -2
Query: 648 *TLNPRLFLLPRAFSNFLPLERTYGLVWLCGTPGALPKCLTASRAFLGPLKRTVFSPSGA 469
*TLNPRLFL P AFSNFLPL RTYGL LCGTPGA PKC TASR FLGPL+RTVF P+GA
Sbjct: 563 *TLNPRLFLFPLAFSNFLPLARTYGLE*LCGTPGAGPKCFTASREFLGPLRRTVFWPNGA 384
Query: 468 RRASWSNVRHSPPALTILALAVSVNLRAVTFIAGTSWILLSSVTVPTMTAMFFSFPSINL 289
RASWS V+HSPPA ++ ALA+SVNL+AVTF+AG S L SSV VPT TA+ S P +N
Sbjct: 383 LRASWSKVKHSPPAFSMRALALSVNLKAVTFMAGISCTLKSSVIVPTKTAILSSLPVMNS 204
Query: 288 TRRRMEIGGRLVLLM 244
T E G L LLM
Sbjct: 203 TSLDRERGALLTLLM 159
Score = 144 bits (310), Expect = 3e-033
Identities = 79/178 (44%), Positives = 103/178 (57%)
Frame = +1 / +3
Query: 115 E*EDQAHCAQV*RCLPQAPRQALPFLGQEDQEQFQRCHSQEAFHE*NQPTTNLHAPPCQV 294
E*EDQ ++V* CLPQA QALP G+E+ Q Q C +EAFHE +Q +++ C V
Sbjct: 30 E*EDQKDSSKV**CLPQAYCQALPVSGKEN**QVQWCDIEEAFHEQSQQSSSFSI*ACGV 209
Query: 295 YGRKGEEHCCHCWHSHR*QKDPGGSSNEGYCPEVHGDSKGQDCQCWWRVPHI*PACSSCS 474
+ +G C W+ + * + SS+E C EVH +SKG + W + ++*PA S S
Sbjct: 210 HDWQGR*DCRLGWNYN**FEGTRDSSHESDCLEVHRESKGSH*ESWR*MLNL*PARSQSS 389
Query: 475 TWREHGPLEGPQECP*GSEALWQGSWSAAQPHQAVCALQGKEVREGSWQEEQPWIQGL 648
EHG E * SEA SW A Q QA+C+ QGKEVREG +EE+ WIQGL
Sbjct: 390 IGPEHGSS*RT*EFT*SSEAFRTCSWCATQSLQAICSGQGKEVREGQRKEEESWIQGL 563
Score = 142 bits (304), Expect = 2e-032
Identities = 62/122 (50%), Positives = 87/122 (71%)
Frame = -2 / -1
Query: 649 LNLESTAVPPATSLLELPSLGAHIRLGVAVRHSRSLAKVPHCLTGILGAPQEDRVLAKWS 470
LNLEST +P ++ LLELPSLG +I LGV V H+RS +++ HC T IL + +++RVLA+WS
Sbjct: 564 LNLESTTLPLSSGLLELPSLGPNIWLGVTVWHTRSRSEMLHCFT*ILRSSKKNRVLAQWS 385
Query: 469 TKSKLVKCEALATSIDNPGPCCLREPQGSNLHCWNLLDPFVICDCANNDSNVLLLSFHKL 290
++S+LVK A +S N PC L EPQGS+ H WNL+ P +I +N D N++ L+ H+L
Sbjct: 384 SESELVKG*AFTSSFLNASPCSLCEPQGSHFHGWNLVYPQIISYSSNQDGNLIFLASHEL 205
Query: 289 DK 284
K
Sbjct: 204 HK 199
Score = 35.4 bits (71), Expect(3) = 9e-060
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -3 / -2
Query: 141 GAVRLVFLFLPPATRSIP 88
GAV LVFL LPPA RSIP
Sbjct: 56 GAVLLVFLLLPPAIRSIP 3
Score = 30.4 bits (60), Expect(3) = 9e-060
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2 / -1
Query: 259 VGFTHEKPLENDSVEIALGPP 197
V F HEKPL+ ++E+A+ P
Sbjct: 174 VDFAHEKPLQYHTIELAISSP 112
>gb|CB264110.1|CB264110 91-E014993-035-003-E23-T7R MPIZ-ADIS-035 Arabidopsis thaliana cDNA
clone MPIZp2000E233Q 5-PRIME, mRNA sequence
Length = 705
Score = 370 bits (802), Expect = e-101
Identities = 153/188 (81%), Positives = 171/188 (90%)
Frame = +2 / +1
Query: 86 MGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP 265
MGIDL+AGG++KKTKRTAPKSDDVYLKL VKLYRFLVRRT S FN VILKRLFMSK N+
Sbjct: 13 MGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKVNKA 192
Query: 266 PISMRRLVKFMEGKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAGGECL 445
P+S+ RLV+FM GKE IAV+VGT+TDD R+ E+PAMKVTALRFTE ARARI AGGECL
Sbjct: 193 PLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 372
Query: 446 TFDQLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRR 625
TFDQLALRAPLG+NTVLLRGPKN+REAV+HFG APGVPHSH+KPYVR+KGRKFEKARG+R
Sbjct: 373 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKR 552
Query: 626 NSRGFKV* 649
SRGF+V*
Sbjct: 553 KSRGFRV* 576
Score = 206 bits (444), Expect(3) = 3e-060
Identities = 93/135 (68%), Positives = 103/135 (76%)
Frame = -3 / -2
Query: 648 *TLNPRLFLLPRAFSNFLPLERTYGLVWLCGTPGALPKCLTASRAFLGPLKRTVFSPSGA 469
*TLNPRLFL P AFSNFLPL RTYGL LCGTPGA PKC TASR FLGPL+RTVF P+GA
Sbjct: 575 *TLNPRLFLFPLAFSNFLPLARTYGLE*LCGTPGAGPKCFTASREFLGPLRRTVFWPNGA 396
Query: 468 RRASWSNVRHSPPALTILALAVSVNLRAVTFIAGTSWILLSSVTVPTMTAMFFSFPSINL 289
RASWS V+HSPPA ++ ALA+SVNL+AVTF+AG S L SSV VPT TA+ S P +N
Sbjct: 395 LRASWSKVKHSPPAFSMRALALSVNLKAVTFMAGISCTLKSSVIVPTKTAILSSLPVMNS 216
Query: 288 TRRRMEIGGRLVLLM 244
T E G L LLM
Sbjct: 215 TSLDRERGALLTLLM 171
Score = 144 bits (310), Expect = 3e-033
Identities = 79/178 (44%), Positives = 103/178 (57%)
Frame = +1 / +3
Query: 115 E*EDQAHCAQV*RCLPQAPRQALPFLGQEDQEQFQRCHSQEAFHE*NQPTTNLHAPPCQV 294
E*EDQ ++V* CLPQA QALP G+E+ Q Q C +EAFHE +Q +++ C V
Sbjct: 42 E*EDQKDSSKV**CLPQAYCQALPVSGKEN**QVQWCDIEEAFHEQSQQSSSFSI*ACGV 221
Query: 295 YGRKGEEHCCHCWHSHR*QKDPGGSSNEGYCPEVHGDSKGQDCQCWWRVPHI*PACSSCS 474
+ +G C W+ + * + SS+E C EVH +SKG + W + ++*PA S S
Sbjct: 222 HDWQGR*DCRLGWNYN**FEGTRDSSHESDCLEVHRESKGSH*ESWR*MLNL*PARSQSS 401
Query: 475 TWREHGPLEGPQECP*GSEALWQGSWSAAQPHQAVCALQGKEVREGSWQEEQPWIQGL 648
EHG E * SEA SW A Q QA+C+ QGKEVREG +EE+ WIQGL
Sbjct: 402 IGPEHGSS*RT*EFT*SSEAFRTCSWCATQSLQAICSGQGKEVREGQRKEEESWIQGL 575
Score = 138 bits (297), Expect = 2e-031
Identities = 61/122 (50%), Positives = 86/122 (70%)
Frame = -2 / -1
Query: 649 LNLESTAVPPATSLLELPSLGAHIRLGVAVRHSRSLAKVPHCLTGILGAPQEDRVLAKWS 470
LN EST +P ++ LLELPSLG +I LGV V H+RS +++ HC T IL + +++RVLA+WS
Sbjct: 576 LNPESTTLPLSSGLLELPSLGPNIWLGVTVWHTRSRSEMLHCFT*ILRSSKKNRVLAQWS 397
Query: 469 TKSKLVKCEALATSIDNPGPCCLREPQGSNLHCWNLLDPFVICDCANNDSNVLLLSFHKL 290
++S+LVK A +S N PC L EPQGS+ H WNL+ P +I +N D N++ L+ H+L
Sbjct: 396 SESELVKG*AFTSSFLNASPCSLCEPQGSHFHGWNLVYPQIISYSSNQDGNLIFLASHEL 217
Query: 289 DK 284
K
Sbjct: 216 HK 211
Score = 37.3 bits (75), Expect(3) = 3e-060
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = -3 / -2
Query: 141 GAVRLVFLFLPPATRSIPI 85
GAV LVFL LPPA RSIPI
Sbjct: 68 GAVLLVFLLLPPAIRSIPI 12
Score = 30.4 bits (60), Expect(3) = 3e-060
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2 / -1
Query: 259 VGFTHEKPLENDSVEIALGPP 197
V F HEKPL+ ++E+A+ P
Sbjct: 186 VDFAHEKPLQYHTIELAISSP 124
>gb|CF652156.1|CF652156 37-L020525-066-003-J09-SP6P MPIZ-ADIS-066 Arabidopsis thaliana cDNA
clone MPIZp2001J093Q 5-PRIME, mRNA sequence
Length = 799
Score = 368 bits (798), Expect = e-100
Identities = 153/190 (80%), Positives = 173/190 (91%)
Frame = +2 / +1
Query: 92 IDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRPPI 271
IDL+AGG++KKTKRTAPKSDDVYLKLLVKLYRFLVRR+ SNFNAVILKRLFMSK N+ P+
Sbjct: 1 IDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNKAPL 180
Query: 272 SMRRLVKFMEGKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAGGECLTF 451
S+ RLV+FM GK+ IAV+VGT+TDD R+ E+PAMKVTALRFTE ARARI AGGECLTF
Sbjct: 181 SLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTF 360
Query: 452 DQLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNS 631
DQLALRAPLG+NTVLLRGPKN+REAV+HFG APGVPHS+TKPYVR KGRKFEKARG+R S
Sbjct: 361 DQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFEKARGKRKS 540
Query: 632 RGFKV*NKLW 661
RGFKV* ++
Sbjct: 541 RGFKV*EDVF 570
Score = 205 bits (442), Expect(2) = 2e-054
Identities = 93/135 (68%), Positives = 102/135 (75%)
Frame = -3 / -3
Query: 648 *TLNPRLFLLPRAFSNFLPLERTYGLVWLCGTPGALPKCLTASRAFLGPLKRTVFSPSGA 469
*TLNPRLF P AFSNFLPL TYGLV LCGTPGA PKC TASR F GPL+RTVF P+GA
Sbjct: 557 *TLNPRLFRFPLAFSNFLPLCLTYGLVLLCGTPGAGPKCFTASREFFGPLRRTVFCPNGA 378
Query: 468 RRASWSNVRHSPPALTILALAVSVNLRAVTFIAGTSWILLSSVTVPTMTAMFFSFPSINL 289
RASWS V+HSPPA +ILALA+SVNL+AVTF+AG S L SSV VPT TA+ S P +N
Sbjct: 377 LRASWSKVKHSPPAFSILALALSVNLKAVTFMAGIS*TLKSSVIVPTNTAILSSLPVMNS 198
Query: 288 TRRRMEIGGRLVLLM 244
T E G L LLM
Sbjct: 197 TSLESERGALLTLLM 153
Score = 156 bits (335), Expect = 1e-036
Identities = 77/180 (42%), Positives = 107/180 (59%)
Frame = +1 / +3
Query: 115 E*EDQAHCAQV*RCLPQAPRQALPFLGQEDQEQFQRCHSQEAFHE*NQPTTNLHAPPCQV 294
E*EDQ C+ V CLP+A RQALP G+E +Q Q C S++AFHE +Q +++ C+V
Sbjct: 24 E*EDQKDCS*VR*CLPKASRQALPVFGEEI*QQLQCCDSEKAFHEQSQQSSSFTL*ACRV 203
Query: 295 YGRKGEEHCCHCWHSHR*QKDPGGSSNEGYCPEVHGDSKGQDCQCWWRVPHI*PACSSCS 474
+ +G + CC W+ H * + S +EGYC EV+ + G + + WWRV ++*PACS S
Sbjct: 204 HDWQG*QDCCVGWNYH**FESS*DSCHEGYCLEVY*EG*G*N*ESWWRVLNL*PACSQSS 383
Query: 475 TWREHGPLEGPQECP*GSEALWQGSWSAAQPHQAVCALQGKEVREGSWQEEQPWIQGLKQ 654
EH +E * SEA SW A Q H A+C GKEV E + ++ WIQGL++
Sbjct: 384 IGTEHSSS*RTKELA*SSEAFRTCSWCATQ*H*AIC*A*GKEV*ES*RKAKESWIQGLRR 563
Score = 144 bits (308), Expect = 5e-033
Identities = 67/151 (44%), Positives = 101/151 (66%)
Frame = -2 / -2
Query: 649 LNLESTAVPPATSLLELPSLGAHIRLGVAVRHSRSLAKVPHCLTGILGAPQEDRVLAKWS 470
L+LEST + ++S L+LPSL +I L V V H+RS +++ HC T +L + +++ VL++WS
Sbjct: 558 LDLESTTLSLSSSFLKLPSLMPNIWLSVTVWHTRSRSEMLHCFTRVLWSSKKNCVLSQWS 379
Query: 469 TKSKLVKCEALATSIDNPGPCCLREPQGSNLHCWNLLDPFVICDCANNDSNVLLLSFHKL 290
++SKLVK AL+TS N P L +PQGSNLH NL++ +I D +N SN+++L+ H+L
Sbjct: 378 SESKLVKG*ALSTSFLNSSPSPLSKPQGSNLHGRNLMNSQIISDSSNQHSNLVILASHEL 199
Query: 289 DKAAHGDWWSVGFTHEKPLENDSVEIALGPP 197
K V F HEKP +N S+E+A+ P
Sbjct: 198 YKPRE*KRSFVDFAHEKPFQNHSIEVAVRSP 106
Score = 30.4 bits (60), Expect(2) = 2e-054
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -3 / -3
Query: 141 GAVRLVFLFLPPATRS 94
GAV LVFL LPPA RS
Sbjct: 50 GAVLLVFLLLPPAIRS 3
>emb|BX822829.1|CNS0A4S7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB67ZC09 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 714
Score = 368 bits (797), Expect = e-100
Identities = 153/188 (81%), Positives = 170/188 (90%)
Frame = +2 / +2
Query: 86 MGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP 265
MGIDL+AGG++KKTKRTAPKSDDVYLKL VKLYRFLVRRT S FN VILKRLFMSK N+
Sbjct: 23 MGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKVNKA 202
Query: 266 PISMRRLVKFMEGKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAGGECL 445
P+S+ RLV+ M GKE IAV+VGT+TDD R+ E+PAMKVTALRFTE ARARI AGGECL
Sbjct: 203 PLSLSRLVECMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 382
Query: 446 TFDQLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRR 625
TFDQLALRAPLG+NTVLLRGPKN+REAV+HFG APGVPHSH+KPYVR+KGRKFEKARG+R
Sbjct: 383 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKR 562
Query: 626 NSRGFKV* 649
SRGFKV*
Sbjct: 563 KSRGFKV* 586
Score = 204 bits (441), Expect(3) = 7e-060
Identities = 93/137 (67%), Positives = 104/137 (75%)
Frame = -3 / -1
Query: 654 LF*TLNPRLFLLPRAFSNFLPLERTYGLVWLCGTPGALPKCLTASRAFLGPLKRTVFSPS 475
L *TLNPRLFL P AFSNFLPL RTYGL LCGTPGA PKC TASR FLGPL+RTVF P+
Sbjct: 591 LS*TLNPRLFLFPLAFSNFLPLARTYGLE*LCGTPGAGPKCFTASREFLGPLRRTVFWPN 412
Query: 474 GARRASWSNVRHSPPALTILALAVSVNLRAVTFIAGTSWILLSSVTVPTMTAMFFSFPSI 295
GA RASWS V+HSPPA ++ ALA+SVNL+AVTF+AG S L SSV VPT TA+ S P +
Sbjct: 411 GALRASWSKVKHSPPAFSMRALALSVNLKAVTFMAGISCTLKSSVIVPTKTAILSSLPVM 232
Query: 294 NLTRRRMEIGGRLVLLM 244
+ T E G L LLM
Sbjct: 231 HSTSLDRERGALLTLLM 181
Score = 147 bits (316), Expect = 4e-034
Identities = 79/182 (43%), Positives = 107/182 (58%)
Frame = +1 / +1
Query: 115 E*EDQAHCAQV*RCLPQAPRQALPFLGQEDQEQFQRCHSQEAFHE*NQPTTNLHAPPCQV 294
E*EDQ ++V* CLPQA QALP G+E+ Q Q C +EAFHE +Q +++ C V
Sbjct: 52 E*EDQKDSSKV**CLPQAYCQALPVSGKEN**QVQWCDIEEAFHEQSQQSSSFSI*ACGV 231
Query: 295 YGRKGEEHCCHCWHSHR*QKDPGGSSNEGYCPEVHGDSKGQDCQCWWRVPHI*PACSSCS 474
+ +G C W+ + * + SS+E C EVH +SKG + W + ++*PA S S
Sbjct: 232 HDWQGR*DCRLGWNYN**FEGTRDSSHESDCLEVHRESKGSH*ESWR*MLNL*PARSQSS 411
Query: 475 TWREHGPLEGPQECP*GSEALWQGSWSAAQPHQAVCALQGKEVREGSWQEEQPWIQGLKQ 654
EHG E * SEA SW A Q QA+C+ QGKEVREG +EE+ WIQGL++
Sbjct: 412 IGPEHGSS*RT*EFT*SSEAFRTCSWCATQSLQAICSGQGKEVREGQRKEEESWIQGLRK 591
Query: 655 IV 660
++
Sbjct: 592 LL 597
Score = 141 bits (302), Expect = 4e-032
Identities = 62/122 (50%), Positives = 86/122 (70%)
Frame = -2 / -3
Query: 649 LNLESTAVPPATSLLELPSLGAHIRLGVAVRHSRSLAKVPHCLTGILGAPQEDRVLAKWS 470
LNLEST +P ++ LLELPSLG +I LGV V H+RS +++ HC T IL + +++RVLA+WS
Sbjct: 586 LNLESTTLPLSSGLLELPSLGPNIWLGVTVWHTRSRSEMLHCFT*ILRSSKKNRVLAQWS 407
Query: 469 TKSKLVKCEALATSIDNPGPCCLREPQGSNLHCWNLLDPFVICDCANNDSNVLLLSFHKL 290
++S+LVK A +S N PC L EPQGS+ H WNL+ P +I +N D N++ L+ H L
Sbjct: 406 SESELVKG*AFTSSFLNASPCSLCEPQGSHFHGWNLVYPQIISYSSNQDGNLIFLASHAL 227
Query: 289 DK 284
K
Sbjct: 226 HK 221
Score = 37.3 bits (75), Expect(3) = 7e-060
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = -3 / -1
Query: 141 GAVRLVFLFLPPATRSIPI 85
GAV LVFL LPPA RSIPI
Sbjct: 78 GAVLLVFLLLPPAIRSIPI 22
Score = 30.4 bits (60), Expect(3) = 7e-060
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2 / -3
Query: 259 VGFTHEKPLENDSVEIALGPP 197
V F HEKPL+ ++E+A+ P
Sbjct: 196 VDFAHEKPLQYHTIELAISSP 134
>gb|CA781829.1|CA781829 051E12AF Infected Arabidopsis Leaf Arabidopsis thaliana cDNA, mRNA
sequence
Length = 725
Score = 366 bits (794), Expect = e-100
Identities = 152/186 (81%), Positives = 169/186 (90%)
Frame = +2 / +1
Query: 92 IDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRPPI 271
IDL+AGG++KKTKRTAPKSDDVYLKL VKLYRFLVRRT S FN VILKRLFMSK N+ P+
Sbjct: 1 IDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKVNKAPL 180
Query: 272 SMRRLVKFMEGKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAGGECLTF 451
S+ RLV+FM GKE IAV+VGT+TDD R+ E+PAMKVTALRFTE ARARI AGGECLTF
Sbjct: 181 SLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTF 360
Query: 452 DQLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNS 631
DQLALRAPLG+NTVLLRGPKN+REAV+HFG APGVPHSH+KPYVR+KGRKFEKARG+R S
Sbjct: 361 DQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKRKS 540
Query: 632 RGFKV* 649
RGFKV*
Sbjct: 541 RGFKV* 558
Score = 207 bits (446), Expect(3) = 2e-058
Identities = 94/137 (68%), Positives = 104/137 (75%)
Frame = -3 / -1
Query: 654 LF*TLNPRLFLLPRAFSNFLPLERTYGLVWLCGTPGALPKCLTASRAFLGPLKRTVFSPS 475
L *TLNPRLFL P AFSNFLPL RTYGL LCGTPGA PKC TASR FLGPL+RTVF P+
Sbjct: 563 LS*TLNPRLFLFPLAFSNFLPLARTYGLE*LCGTPGAGPKCFTASREFLGPLRRTVFWPN 384
Query: 474 GARRASWSNVRHSPPALTILALAVSVNLRAVTFIAGTSWILLSSVTVPTMTAMFFSFPSI 295
GA RASWS V+HSPPA ++ ALA+SVNL+AVTF+AG S L SSV VPT TA+ S P +
Sbjct: 383 GALRASWSKVKHSPPAFSMRALALSVNLKAVTFMAGISCTLKSSVIVPTKTAILSSLPVM 204
Query: 294 NLTRRRMEIGGRLVLLM 244
N T E G L LLM
Sbjct: 203 NSTSLDRERGALLTLLM 153
Score = 147 bits (316), Expect = 4e-034
Identities = 79/182 (43%), Positives = 107/182 (58%)
Frame = +1 / +3
Query: 115 E*EDQAHCAQV*RCLPQAPRQALPFLGQEDQEQFQRCHSQEAFHE*NQPTTNLHAPPCQV 294
E*EDQ ++V* CLPQA QALP G+E+ Q Q C +EAFHE +Q +++ C V
Sbjct: 24 E*EDQKDSSKV**CLPQAYCQALPVSGKEN**QVQWCDIEEAFHEQSQQSSSFSI*ACGV 203
Query: 295 YGRKGEEHCCHCWHSHR*QKDPGGSSNEGYCPEVHGDSKGQDCQCWWRVPHI*PACSSCS 474
+ +G C W+ + * + SS+E C EVH +SKG + W + ++*PA S S
Sbjct: 204 HDWQGR*DCRLGWNYN**FEGTRDSSHESDCLEVHRESKGSH*ESWR*MLNL*PARSQSS 383
Query: 475 TWREHGPLEGPQECP*GSEALWQGSWSAAQPHQAVCALQGKEVREGSWQEEQPWIQGLKQ 654
EHG E * SEA SW A Q QA+C+ QGKEVREG +EE+ WIQGL++
Sbjct: 384 IGPEHGSS*RT*EFT*SSEAFRTCSWCATQSLQAICSGQGKEVREGQRKEEESWIQGLRK 563
Query: 655 IV 660
++
Sbjct: 564 LL 569
Score = 142 bits (304), Expect = 2e-032
Identities = 62/122 (50%), Positives = 87/122 (71%)
Frame = -2 / -3
Query: 649 LNLESTAVPPATSLLELPSLGAHIRLGVAVRHSRSLAKVPHCLTGILGAPQEDRVLAKWS 470
LNLEST +P ++ LLELPSLG +I LGV V H+RS +++ HC T IL + +++RVLA+WS
Sbjct: 558 LNLESTTLPLSSGLLELPSLGPNIWLGVTVWHTRSRSEMLHCFT*ILRSSKKNRVLAQWS 379
Query: 469 TKSKLVKCEALATSIDNPGPCCLREPQGSNLHCWNLLDPFVICDCANNDSNVLLLSFHKL 290
++S+LVK A +S N PC L EPQGS+ H WNL+ P +I +N D N++ L+ H+L
Sbjct: 378 SESELVKG*AFTSSFLNASPCSLCEPQGSHFHGWNLVYPQIISYSSNQDGNLIFLASHEL 199
Query: 289 DK 284
K
Sbjct: 198 HK 193
Score = 30.4 bits (60), Expect(3) = 2e-058
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -3 / -1
Query: 141 GAVRLVFLFLPPATRS 94
GAV LVFL LPPA RS
Sbjct: 50 GAVLLVFLLLPPAIRS 3
Score = 30.4 bits (60), Expect(3) = 2e-058
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2 / -3
Query: 259 VGFTHEKPLENDSVEIALGPP 197
V F HEKPL+ ++E+A+ P
Sbjct: 168 VDFAHEKPLQYHTIELAISSP 106
>gb|CF652057.1|CF652057 31-L020362-066-002-N08-SP6P MPIZ-ADIS-066 Arabidopsis thaliana cDNA
clone MPIZp2001N082Q 5-PRIME, mRNA sequence
Length = 777
Score = 366 bits (793), Expect = e-100
Identities = 152/185 (82%), Positives = 170/185 (91%)
Frame = +2 / +2
Query: 95 DLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRPPIS 274
DL+AGG++KKTKRTAPKSDDVYLKLLVKLYRFLVRR+ SNFNAVILKRLFMSK N+ P+S
Sbjct: 2 DLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNKAPLS 181
Query: 275 MRRLVKFMEGKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAGGECLTFD 454
+ RLV+FM GK+ IAV+VGT+TDD R+ E+PAMKVTALRFTE ARARI AGGECLTFD
Sbjct: 182 LSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFD 361
Query: 455 QLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSR 634
QLALRAPLG+NTVLLRGPKN+REAV+HFG APGVPHS+TKPYVR KGRKFEKARG+R SR
Sbjct: 362 QLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFEKARGKRKSR 541
Query: 635 GFKV* 649
GFKV*
Sbjct: 542 GFKV* 556
Score = 205 bits (442), Expect(2) = 2e-054
Identities = 93/135 (68%), Positives = 102/135 (75%)
Frame = -3 / -1
Query: 648 *TLNPRLFLLPRAFSNFLPLERTYGLVWLCGTPGALPKCLTASRAFLGPLKRTVFSPSGA 469
*TLNPRLF P AFSNFLPL TYGLV LCGTPGA PKC TASR F GPL+RTVF P+GA
Sbjct: 555 *TLNPRLFRFPLAFSNFLPLCLTYGLVLLCGTPGAGPKCFTASREFFGPLRRTVFCPNGA 376
Query: 468 RRASWSNVRHSPPALTILALAVSVNLRAVTFIAGTSWILLSSVTVPTMTAMFFSFPSINL 289
RASWS V+HSPPA +ILALA+SVNL+AVTF+AG S L SSV VPT TA+ S P +N
Sbjct: 375 LRASWSKVKHSPPAFSILALALSVNLKAVTFMAGIS*TLKSSVIVPTNTAILSSLPVMNS 196
Query: 288 TRRRMEIGGRLVLLM 244
T E G L LLM
Sbjct: 195 TSLESERGALLTLLM 151
Score = 158 bits (339), Expect = 3e-037
Identities = 78/180 (43%), Positives = 107/180 (59%)
Frame = +1 / +1
Query: 115 E*EDQAHCAQV*RCLPQAPRQALPFLGQEDQEQFQRCHSQEAFHE*NQPTTNLHAPPCQV 294
E*EDQ C+ V CLP+A RQALP G+E +Q Q C S+EAFHE +Q +++ C+V
Sbjct: 22 E*EDQKDCS*VR*CLPKASRQALPVFGEEI*QQLQCCDSEEAFHEQSQQSSSFTL*ACRV 201
Query: 295 YGRKGEEHCCHCWHSHR*QKDPGGSSNEGYCPEVHGDSKGQDCQCWWRVPHI*PACSSCS 474
+ +G + CC W+ H * + S +EGYC EV+ + G + + WWRV ++*PACS S
Sbjct: 202 HDWQG*QDCCVGWNYH**FESS*DSCHEGYCLEVY*EG*G*N*ESWWRVLNL*PACSQSS 381
Query: 475 TWREHGPLEGPQECP*GSEALWQGSWSAAQPHQAVCALQGKEVREGSWQEEQPWIQGLKQ 654
EH +E * SEA SW A Q H A+C GKEV E + ++ WIQGL++
Sbjct: 382 IGTEHSSS*RTKELA*SSEAFRTCSWCATQ*H*AIC*A*GKEV*ES*RKAKESWIQGLRR 561
Score = 145 bits (312), Expect = 1e-033
Identities = 68/151 (45%), Positives = 102/151 (67%)
Frame = -2 / -3
Query: 649 LNLESTAVPPATSLLELPSLGAHIRLGVAVRHSRSLAKVPHCLTGILGAPQEDRVLAKWS 470
L+LEST + ++S L+LPSL +I L V V H+RS +++ HC T +L + +++ VL++WS
Sbjct: 556 LDLESTTLSLSSSFLKLPSLMPNIWLSVTVWHTRSRSEMLHCFTRVLWSSKKNCVLSQWS 377
Query: 469 TKSKLVKCEALATSIDNPGPCCLREPQGSNLHCWNLLDPFVICDCANNDSNVLLLSFHKL 290
++SKLVK AL+TS N P L +PQGSNLH NL++ +I D +N SN+++L+ H+L
Sbjct: 376 SESKLVKG*ALSTSFLNSSPSPLSKPQGSNLHGRNLMNSQIISDSSNQHSNLVILASHEL 197
Query: 289 DKAAHGDWWSVGFTHEKPLENDSVEIALGPP 197
K V F HEKPL+N S+E+A+ P
Sbjct: 196 YKPRE*KRSFVDFAHEKPLQNHSIEVAVRSP 104
Score = 30.4 bits (60), Expect(2) = 2e-054
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -3 / -1
Query: 141 GAVRLVFLFLPPATRS 94
GAV LVFL LPPA RS
Sbjct: 48 GAVLLVFLLLPPAIRS 1
>emb|BX822675.1|CNS0A7MK Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB57ZH02 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 722
Score = 363 bits (787), Expect = 5e-099
Identities = 151/187 (80%), Positives = 170/187 (90%)
Frame = +2 / +2
Query: 89 GIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRPP 268
GIDL+AGG++KKTKRTAPKSDDVYLKL VKLYRFLVRRT S FN VILKRLFMSK N+ P
Sbjct: 2 GIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKVNKAP 181
Query: 269 ISMRRLVKFMEGKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAGGECLT 448
+S+ RLV+FM GKE IAV+VGT+TDD R+ E+PAMKVTALRFTE ARARI AGGECLT
Sbjct: 182 LSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLT 361
Query: 449 FDQLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRN 628
FDQLALRAPLG+NTVLLRGPKN+REAV+HFG APGVP+S++KPYVR+KGRKFEKARG+R
Sbjct: 362 FDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPYSNSKPYVRAKGRKFEKARGKRK 541
Query: 629 SRGFKV* 649
SRGFKV*
Sbjct: 542 SRGFKV* 562
Score = 203 bits (437), Expect(3) = 8e-059
Identities = 93/137 (67%), Positives = 103/137 (75%)
Frame = -3 / -3
Query: 654 LF*TLNPRLFLLPRAFSNFLPLERTYGLVWLCGTPGALPKCLTASRAFLGPLKRTVFSPS 475
L *TLNPRLFL P AFSNFLPL RTYGL L GTPGA PKC TASR FLGPL+RTVF P+
Sbjct: 567 LS*TLNPRLFLFPLAFSNFLPLARTYGLELLYGTPGAGPKCFTASREFLGPLRRTVFWPN 388
Query: 474 GARRASWSNVRHSPPALTILALAVSVNLRAVTFIAGTSWILLSSVTVPTMTAMFFSFPSI 295
GA RASWS V+HSPPA ++ ALA+SVNL+AVTF+AG S L SSV VPT TA+ S P +
Sbjct: 387 GALRASWSKVKHSPPAFSMRALALSVNLKAVTFMAGISCTLKSSVIVPTKTAILSSLPVM 208
Query: 294 NLTRRRMEIGGRLVLLM 244
N T E G L LLM
Sbjct: 207 NSTSLDRERGALLTLLM 157
Score = 146 bits (313), Expect = 1e-033
Identities = 79/182 (43%), Positives = 107/182 (58%)
Frame = +1 / +1
Query: 115 E*EDQAHCAQV*RCLPQAPRQALPFLGQEDQEQFQRCHSQEAFHE*NQPTTNLHAPPCQV 294
E*EDQ ++V* CLPQA QALP G+E+ Q Q C +EAFHE +Q +++ C V
Sbjct: 28 E*EDQKDSSKV**CLPQAYCQALPVSGKEN**QVQWCDIEEAFHEQSQQSSSFSI*ACGV 207
Query: 295 YGRKGEEHCCHCWHSHR*QKDPGGSSNEGYCPEVHGDSKGQDCQCWWRVPHI*PACSSCS 474
+ +G C W+ + * + SS+E C EVH +SKG + W + ++*PA S S
Sbjct: 208 HDWQGR*DCRLGWNYN**FEGTRDSSHESNCLEVHRESKGSH*ESWR*MLNL*PARSQSS 387
Query: 475 TWREHGPLEGPQECP*GSEALWQGSWSAAQPHQAVCALQGKEVREGSWQEEQPWIQGLKQ 654
EHG E * SEA SW A Q QA+C+ QGKEVREG +EE+ WIQGL++
Sbjct: 388 IGPEHGSS*RT*EFT*SSEAFRTCSWCAIQ*LQAICSGQGKEVREGQRKEEESWIQGLRK 567
Query: 655 IV 660
++
Sbjct: 568 LL 573
Score = 140 bits (301), Expect = 5e-032
Identities = 62/122 (50%), Positives = 86/122 (70%)
Frame = -2 / -2
Query: 649 LNLESTAVPPATSLLELPSLGAHIRLGVAVRHSRSLAKVPHCLTGILGAPQEDRVLAKWS 470
LNLEST +P ++ LLELPSLG +I LGV V H+RS +++ HC T IL + +++RVLA+WS
Sbjct: 562 LNLESTTLPLSSGLLELPSLGPNIWLGVTVWHTRSRSEMLHCFT*ILRSSKKNRVLAQWS 383
Query: 469 TKSKLVKCEALATSIDNPGPCCLREPQGSNLHCWNLLDPFVICDCANNDSNVLLLSFHKL 290
++S+LVK A +S N PC L EPQGS H WNL+ P +I +N D N++ L+ H+L
Sbjct: 382 SESELVKG*AFTSSFLNASPCSLCEPQGSYFHGWNLVYPQIISYSSNQDGNLIFLASHEL 203
Query: 289 DK 284
K
Sbjct: 202 HK 197
Score = 35.4 bits (71), Expect(3) = 8e-059
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -3 / -3
Query: 141 GAVRLVFLFLPPATRSIP 88
GAV LVFL LPPA RSIP
Sbjct: 54 GAVLLVFLLLPPAIRSIP 1
Score = 30.4 bits (60), Expect(3) = 8e-059
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2 / -2
Query: 259 VGFTHEKPLENDSVEIALGPP 197
V F HEKPL+ ++E+A+ P
Sbjct: 172 VDFAHEKPLQYHTIELAISSP 110
>gb|BE038821.1|BE038821 AB07C09 AB Arabidopsis thaliana cDNA 5' similar to 60s ribosomal
protein l18, mRNA sequence
Length = 702
Score = 358 bits (777), Expect = 1e-097
Identities = 149/185 (80%), Positives = 168/185 (90%)
Frame = +2 / +1
Query: 107 GGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRPPISMRRL 286
GG++KKTKRTAPKSDDVYLKLLVKLYRFLVRR+ SNFNAVILKRLFMSK N+ P+S+ RL
Sbjct: 7 GGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNKAPLSLSRL 186
Query: 287 VKFMEGKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAGGECLTFDQLAL 466
V+FM GK+ IAV+VGT+TDD R+ E+PAMKVTALRFTE ARARI AGGECLTFDQLAL
Sbjct: 187 VEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFDQLAL 366
Query: 467 RAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV 646
RAPLG+NTVLLRGPKN+REAV+HFG APGVPHS+TKPYVR KGRKFEKARG+R SRGFKV
Sbjct: 367 RAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFEKARGKRKSRGFKV 546
Query: 647 *NKLW 661
* ++
Sbjct: 547 *EDVF 561
Score = 205 bits (442), Expect(2) = 8e-053
Identities = 93/135 (68%), Positives = 102/135 (75%)
Frame = -3 / -2
Query: 648 *TLNPRLFLLPRAFSNFLPLERTYGLVWLCGTPGALPKCLTASRAFLGPLKRTVFSPSGA 469
*TLNPRLF P AFSNFLPL TYGLV LCGTPGA PKC TASR F GPL+RTVF P+GA
Sbjct: 548 *TLNPRLFRFPLAFSNFLPLCLTYGLVLLCGTPGAGPKCFTASREFFGPLRRTVFCPNGA 369
Query: 468 RRASWSNVRHSPPALTILALAVSVNLRAVTFIAGTSWILLSSVTVPTMTAMFFSFPSINL 289
RASWS V+HSPPA +ILALA+SVNL+AVTF+AG S L SSV VPT TA+ S P +N
Sbjct: 368 LRASWSKVKHSPPAFSILALALSVNLKAVTFMAGIS*TLKSSVIVPTNTAILSSLPVMNS 189
Query: 288 TRRRMEIGGRLVLLM 244
T E G L LLM
Sbjct: 188 TSLESERGALLTLLM 144
Score = 156 bits (335), Expect = 1e-036
Identities = 77/180 (42%), Positives = 107/180 (59%)
Frame = +1 / +3
Query: 115 E*EDQAHCAQV*RCLPQAPRQALPFLGQEDQEQFQRCHSQEAFHE*NQPTTNLHAPPCQV 294
E*EDQ C+ V CLP+A RQALP G+E +Q Q C S++AFHE +Q +++ C+V
Sbjct: 15 E*EDQKDCS*VR*CLPKASRQALPVFGEEI*QQLQCCDSEKAFHEQSQQSSSFTL*ACRV 194
Query: 295 YGRKGEEHCCHCWHSHR*QKDPGGSSNEGYCPEVHGDSKGQDCQCWWRVPHI*PACSSCS 474
+ +G + CC W+ H * + S +EGYC EV+ + G + + WWRV ++*PACS S
Sbjct: 195 HDWQG*QDCCVGWNYH**FESS*DSCHEGYCLEVY*EG*G*N*ESWWRVLNL*PACSQSS 374
Query: 475 TWREHGPLEGPQECP*GSEALWQGSWSAAQPHQAVCALQGKEVREGSWQEEQPWIQGLKQ 654
EH +E * SEA SW A Q H A+C GKEV E + ++ WIQGL++
Sbjct: 375 IGTEHSSS*RTKELA*SSEAFRTCSWCATQ*H*AIC*A*GKEV*ES*RKAKESWIQGLRR 554
Score = 144 bits (308), Expect = 5e-033
Identities = 67/151 (44%), Positives = 101/151 (66%)
Frame = -2 / -1
Query: 649 LNLESTAVPPATSLLELPSLGAHIRLGVAVRHSRSLAKVPHCLTGILGAPQEDRVLAKWS 470
L+LEST + ++S L+LPSL +I L V V H+RS +++ HC T +L + +++ VL++WS
Sbjct: 549 LDLESTTLSLSSSFLKLPSLMPNIWLSVTVWHTRSRSEMLHCFTRVLWSSKKNCVLSQWS 370
Query: 469 TKSKLVKCEALATSIDNPGPCCLREPQGSNLHCWNLLDPFVICDCANNDSNVLLLSFHKL 290
++SKLVK AL+TS N P L +PQGSNLH NL++ +I D +N SN+++L+ H+L
Sbjct: 369 SESKLVKG*ALSTSFLNSSPSPLSKPQGSNLHGRNLMNSQIISDSSNQHSNLVILASHEL 190
Query: 289 DKAAHGDWWSVGFTHEKPLENDSVEIALGPP 197
K V F HEKP +N S+E+A+ P
Sbjct: 189 YKPRE*KRSFVDFAHEKPFQNHSIEVAVRSP 97
Score = 24.9 bits (48), Expect(2) = 8e-053
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3 / -2
Query: 141 GAVRLVFLFLPP 106
GAV LVFL LPP
Sbjct: 41 GAVLLVFLLLPP 6
>gb|CB254873.1|CB254873 57-E018361-019-007-A16-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768A167Q 5-PRIME, mRNA sequence
Length = 544
Score = 343 bits (744), Expect = 4e-093
Identities = 143/181 (79%), Positives = 162/181 (89%)
Frame = +2 / +2
Query: 95 DLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRPPIS 274
DL+AGG++KKTKRTAPKSDDVYLKLLVKLYRFLVRR+ SNFNAVILKRLFMSK N+ P+S
Sbjct: 2 DLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNKAPLS 181
Query: 275 MRRLVKFMEGKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAGGECLTFD 454
+ RLV+FM GK+ IAV+VGT+TDD R+ E+PAMKVTALRFTE ARARI AGGECLTFD
Sbjct: 182 LSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFD 361
Query: 455 QLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSR 634
QLALRAPLG+NTVLL GPKN+REAV+HF APGVPHS+TKPYVR KG KF+ ARG+R SR
Sbjct: 362 QLALRAPLGQNTVLLIGPKNSREAVKHFRPAPGVPHSNTKPYVRHKGTKFDIARGKRKSR 541
Query: 635 G 637
G
Sbjct: 542 G 544
Score = 188 bits (405), Expect(2) = 2e-049
Identities = 85/131 (64%), Positives = 96/131 (73%)
Frame = -3 / -2
Query: 636 PRLFLLPRAFSNFLPLERTYGLVWLCGTPGALPKCLTASRAFLGPLKRTVFSPSGARRAS 457
PRLF P A SNF+PL TYGLV LCGTPGA KC TASR F GP++RTVF P+GA RAS
Sbjct: 543 PRLFRFPLAISNFVPLCLTYGLVLLCGTPGAGLKCFTASREFFGPIRRTVFCPNGALRAS 364
Query: 456 WSNVRHSPPALTILALAVSVNLRAVTFIAGTSWILLSSVTVPTMTAMFFSFPSINLTRRR 277
WS V+HSPPA +ILALA+SVNL+AVTF+AG S L SSV VPT TA+ S P +N T
Sbjct: 363 WSKVKHSPPAFSILALALSVNLKAVTFMAGIS*TLKSSVIVPTNTAILSSLPVMNSTSLE 184
Query: 276 MEIGGRLVLLM 244
E G L LLM
Sbjct: 183 SERGALLTLLM 151
Score = 135 bits (289), Expect = 2e-030
Identities = 68/163 (41%), Positives = 94/163 (57%)
Frame = +1 / +1
Query: 115 E*EDQAHCAQV*RCLPQAPRQALPFLGQEDQEQFQRCHSQEAFHE*NQPTTNLHAPPCQV 294
E*EDQ C+ + CLP+A RQALP G+E +Q Q C S++AFHE +Q +++ C+V
Sbjct: 22 E*EDQKDCS*IR*CLPKASRQALPVFGEEI*QQLQCCDSEKAFHEQSQQSSSFTL*ACRV 201
Query: 295 YGRKGEEHCCHCWHSHR*QKDPGGSSNEGYCPEVHGDSKGQDCQCWWRVPHI*PACSSCS 474
+ +G + CC W+ H * + S +EGYC EV+ + G + + W RV ++*PACS S
Sbjct: 202 HDWQG*QDCCVGWNYH**FESS*DSCHEGYCLEVY*EG*G*N*ESWRRVLNL*PACSQSS 381
Query: 475 TWREHGPLEGPQECP*GSEALWQGSWSAAQPHQAVCALQGKEV 603
EH +E * SEA SW A Q H A+C G EV
Sbjct: 382 IGTEHSSSYRTKELA*SSEAFQTCSWCATQ*H*AIC*A*GNEV 510
Score = 129 bits (276), Expect = 1e-028
Identities = 61/147 (41%), Positives = 96/147 (65%)
Frame = -2 / -1
Query: 637 STAVPPATSLLELPSLGAHIRLGVAVRHSRSLAKVPHCLTGILGAPQEDRVLAKWSTKSK 458
ST + ++S ++L SL +I L V V H+RS +++ HC T +L + +++ VL++WS++SK
Sbjct: 544 STTLSLSSSYIKLRSLMPNIWLSVTVWHTRSRSEMLHCFTRVLWSYKKNCVLSQWSSESK 365
Query: 457 LVKCEALATSIDNPGPCCLREPQGSNLHCWNLLDPFVICDCANNDSNVLLLSFHKLDKAA 278
LVK AL++S N P L +PQGSNLH NL++ +I D +N SN+++L+ H+L K
Sbjct: 364 LVKG*ALSSSFLNSSPSPLSKPQGSNLHGRNLMNSQIISDSSNQHSNLVILASHELYKPR 185
Query: 277 HGDWWSVGFTHEKPLENDSVEIALGPP 197
V F HEKP +N S+E+A+ P
Sbjct: 184 E*KRSFVDFAHEKPFQNHSIEVAVRSP 104
Score = 30.4 bits (60), Expect(2) = 2e-049
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -3 / -2
Query: 141 GAVRLVFLFLPPATRS 94
GAV LVFL LPPA RS
Sbjct: 48 GAVLLVFLLLPPAIRS 1
>gb|AV559994.1|AV559994 AV559994 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ127b11F 3', mRNA sequence
Length = 504
Score = 325 bits (704), Expect = 1e-087
Identities = 134/166 (80%), Positives = 149/166 (89%)
Frame = +2 / +3
Query: 86 MGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP 265
MGIDL+AGG++ KTKRTAPKSDDVYLKL VKLYRFLVRRT S FN VILKRLFMSK N+
Sbjct: 6 MGIDLIAGGKSNKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKVNKA 185
Query: 266 PISMRRLVKFMEGKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAGGECL 445
P+S+ RLV+FM GKE IAV+VGT+TDD R+ E+PAMKVTALRFTE ARARI AGGECL
Sbjct: 186 PLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 365
Query: 446 TFDQLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYV 583
TFDQLALRAPLG+NTVLLRGPKN+REAV+HFG APGVPHSH+KPYV
Sbjct: 366 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYV 503
Score = 164 bits (352), Expect(3) = 6e-047
Identities = 74/113 (65%), Positives = 84/113 (74%)
Frame = -3 / -3
Query: 582 TYGLVWLCGTPGALPKCLTASRAFLGPLKRTVFSPSGARRASWSNVRHSPPALTILALAV 403
TYGL LCGTPGA PKC TASR FLGPL+RTVF P+GA RASWS V+HSPPA ++ ALA+
Sbjct: 502 TYGLE*LCGTPGAGPKCFTASREFLGPLRRTVFWPNGALRASWSKVKHSPPAFSMRALAL 323
Query: 402 SVNLRAVTFIAGTSWILLSSVTVPTMTAMFFSFPSINLTRRRMEIGGRLVLLM 244
SVNL+AVTF+AG S L SSV VPT TA+ S P +N T E G L LLM
Sbjct: 322 SVNLKAVTFMAGISCTLKSSVIVPTKTAILSSLPVMNSTSLDRERGALLTLLM 164
Score = 109 bits (232), Expect = 2e-022
Identities = 47/100 (47%), Positives = 69/100 (69%)
Frame = -2 / -2
Query: 583 HIRLGVAVRHSRSLAKVPHCLTGILGAPQEDRVLAKWSTKSKLVKCEALATSIDNPGPCC 404
+I LGV V H+RS +++ HC T IL + +++RVLA+WS++S+LVK A +S N PC
Sbjct: 503 NIWLGVTVWHTRSRSEMLHCFT*ILRSSKKNRVLAQWSSESELVKG*AFTSSFLNASPCS 324
Query: 403 LREPQGSNLHCWNLLDPFVICDCANNDSNVLLLSFHKLDK 284
L EPQGS+ H WNL+ P +I +N D N++ L+ H+L K
Sbjct: 323 LCEPQGSHFHGWNLVYPQIISYSSNQDGNLIFLASHELHK 204
Score = 105 bits (224), Expect = 2e-021
Identities = 63/156 (40%), Positives = 84/156 (53%)
Frame = +1 / +2
Query: 115 E*EDQAHCAQV*RCLPQAPRQALPFLGQEDQEQFQRCHSQEAFHE*NQPTTNLHAPPCQV 294
E* DQ ++V* CLPQA QALP G+E+ Q Q C +EAFHE +Q +++ C V
Sbjct: 35 E**DQKDSSKV**CLPQAYCQALPVSGKEN**QVQWCDIEEAFHEQSQQSSSFSI*ACGV 214
Query: 295 YGRKGEEHCCHCWHSHR*QKDPGGSSNEGYCPEVHGDSKGQDCQCWWRVPHI*PACSSCS 474
+ +G C W+ + * + SS+E C EVH +SKG + W + ++*PA S S
Sbjct: 215 HDWQGR*DCRLGWNYN**FEGTRDSSHESDCLEVHRESKGSH*ESWR*MLNL*PARSQSS 394
Query: 475 TWREHGPLEGPQECP*GSEALWQGSWSAAQPHQAVC 582
EHG E * SEA SW A Q QA+C
Sbjct: 395 IGPEHGSS*RT*EFT*SSEAFRTCSWCATQSLQAIC 502
Score = 34.5 bits (69), Expect(3) = 6e-047
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = -3 / -3
Query: 141 GAVRLVFLFLPPATRSIPI 85
GAV LV L LPPA RSIPI
Sbjct: 61 GAVLLVLLLLPPAIRSIPI 5
Score = 30.4 bits (60), Expect(3) = 6e-047
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2 / -2
Query: 259 VGFTHEKPLENDSVEIALGPP 197
V F HEKPL+ ++E+A+ P
Sbjct: 179 VDFAHEKPLQYHTIELAISSP 117
>gb|AV550190.1|AV550190 AV550190 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ109e04R 5', mRNA sequence
Length = 518
Score = 319 bits (690), Expect = 1e-085
Identities = 133/170 (78%), Positives = 148/170 (87%)
Frame = +2 / +1
Query: 62 PSAAAPAGMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRL 241
PS MGIDL+AGG++KKTKRTAPKSDDVYLKL VKLYRFLVRRT S FN VILKRL
Sbjct: 7 PSPQRRTTMGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRL 186
Query: 242 FMSKTNRPPISMRRLVKFMEGKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARI 421
FMSK N+ P+S+ RLV+FM GKE IAV+VGT+TDD R+ E+PAMKVTALRFTE ARARI
Sbjct: 187 FMSKVNKAPLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARI 366
Query: 422 VNAGGECLTFDQLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHT 571
AGGECLTFDQLALRAPLG+NTVLLRGPKN+REAV+HFG APGVPHSH+
Sbjct: 367 EKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHS 516
Score = 156 bits (336), Expect(3) = 1e-045
Identities = 70/107 (65%), Positives = 80/107 (74%)
Frame = -3 / -1
Query: 564 LCGTPGALPKCLTASRAFLGPLKRTVFSPSGARRASWSNVRHSPPALTILALAVSVNLRA 385
LCGTPGA PKC TASR FLGPL+RTVF P+GA RASWS V+HSPPA ++ ALA+SVNL+A
Sbjct: 509 LCGTPGAGPKCFTASREFLGPLRRTVFWPNGALRASWSKVKHSPPAFSMRALALSVNLKA 330
Query: 384 VTFIAGTSWILLSSVTVPTMTAMFFSFPSINLTRRRMEIGGRLVLLM 244
VTF+AG S L SSV VPT TA+ S P +N T E G L LLM
Sbjct: 329 VTFMAGISCTLKSSVIVPTKTAILSSLPVMNSTSLDRERGALLTLLM 189
Score = 106 bits (226), Expect(2) = 8e-022
Identities = 45/96 (46%), Positives = 66/96 (68%)
Frame = -2 / -3
Query: 571 GVAVRHSRSLAKVPHCLTGILGAPQEDRVLAKWSTKSKLVKCEALATSIDNPGPCCLREP 392
GV V H+RS +++ HC T IL + +++RVLA+WS++S+LVK A +S N PC L EP
Sbjct: 516 GVTVWHTRSRSEMLHCFT*ILRSSKKNRVLAQWSSESELVKG*AFTSSFLNASPCSLCEP 337
Query: 391 QGSNLHCWNLLDPFVICDCANNDSNVLLLSFHKLDK 284
QGS+ H WNL+ P +I +N D N++ L+ H+L K
Sbjct: 336 QGSHFHGWNLVYPQIISYSSNQDGNLIFLASHELHK 229
Score = 37.3 bits (75), Expect(3) = 1e-045
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = -3 / -1
Query: 141 GAVRLVFLFLPPATRSIPI 85
GAV LVFL LPPA RSIPI
Sbjct: 86 GAVLLVFLLLPPAIRSIPI 30
Score = 30.4 bits (60), Expect(3) = 1e-045
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2 / -3
Query: 259 VGFTHEKPLENDSVEIALGPP 197
V F HEKPL+ ++E+A+ P
Sbjct: 204 VDFAHEKPLQYHTIELAISSP 142
Score = 21.7 bits (41), Expect(2) = 8e-022
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -2 / -3
Query: 127 GLLIPPTGDEVDTH 86
GLL +GD+++TH
Sbjct: 72 GLLTLTSGDQINTH 31
>gb|AV782778.1|AV782778 AV782778 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-01-F21 3',
mRNA sequence
Length = 687
Score = 314 bits (681), Expect = 2e-084
Identities = 131/162 (80%), Positives = 145/162 (89%)
Frame = +2 / -3
Query: 164 KLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRPPISMRRLVKFMEGKEKNIAVIVGTVT 343
KL VKLYRFLVRRT S FN VILKRLFMSK N+ P+S+ RLV+FM GKE IAV+VGT+T
Sbjct: 685 KLTVKLYRFLVRRTNSKFNGVILKRLFMSKVNKAPLSLSRLVEFMTGKEDKIAVLVGTIT 506
Query: 344 DDKRIQEVPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPLGENTVLLRGPKNARE 523
DD R+ E+PAMKVTALRFTE ARARI AGGECLTFDQLALRAPLG+NTVLLRGPKN+RE
Sbjct: 505 DDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSRE 326
Query: 524 AVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV* 649
AV+HFG APGVPHSH+KPYVR+KGRKFEKARG+R SRGFKV*
Sbjct: 325 AVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKRKSRGFKV* 200
Score = 207 bits (446), Expect(2) = 5e-055
Identities = 94/137 (68%), Positives = 104/137 (75%)
Frame = -3 / +3
Query: 654 LF*TLNPRLFLLPRAFSNFLPLERTYGLVWLCGTPGALPKCLTASRAFLGPLKRTVFSPS 475
L *TLNPRLFL P AFSNFLPL RTYGL LCGTPGA PKC TASR FLGPL+RTVF P+
Sbjct: 195 LS*TLNPRLFLFPLAFSNFLPLARTYGLE*LCGTPGAGPKCFTASREFLGPLRRTVFWPN 374
Query: 474 GARRASWSNVRHSPPALTILALAVSVNLRAVTFIAGTSWILLSSVTVPTMTAMFFSFPSI 295
GA RASWS V+HSPPA ++ ALA+SVNL+AVTF+AG S L SSV VPT TA+ S P +
Sbjct: 375 GALRASWSKVKHSPPAFSMRALALSVNLKAVTFMAGISCTLKSSVIVPTKTAILSSLPVM 554
Query: 294 NLTRRRMEIGGRLVLLM 244
N T E G L LLM
Sbjct: 555 NSTSLDRERGALLTLLM 605
Score = 142 bits (304), Expect = 2e-032
Identities = 62/122 (50%), Positives = 87/122 (71%)
Frame = -2 / +2
Query: 649 LNLESTAVPPATSLLELPSLGAHIRLGVAVRHSRSLAKVPHCLTGILGAPQEDRVLAKWS 470
LNLEST +P ++ LLELPSLG +I LGV V H+RS +++ HC T IL + +++RVLA+WS
Sbjct: 200 LNLESTTLPLSSGLLELPSLGPNIWLGVTVWHTRSRSEMLHCFT*ILRSSKKNRVLAQWS 379
Query: 469 TKSKLVKCEALATSIDNPGPCCLREPQGSNLHCWNLLDPFVICDCANNDSNVLLLSFHKL 290
++S+LVK A +S N PC L EPQGS+ H WNL+ P +I +N D N++ L+ H+L
Sbjct: 380 SESELVKG*AFTSSFLNASPCSLCEPQGSHFHGWNLVYPQIISYSSNQDGNLIFLASHEL 559
Query: 289 DK 284
K
Sbjct: 560 HK 565
Score = 128 bits (274), Expect = 3e-028
Identities = 69/166 (41%), Positives = 95/166 (57%)
Frame = +1 / -2
Query: 163 QAPRQALPFLGQEDQEQFQRCHSQEAFHE*NQPTTNLHAPPCQVYGRKGEEHCCHCWHSH 342
QA QALP G+E+ Q Q C +EAFHE +Q +++ C V+ +G C W+ +
Sbjct: 686 QAYCQALPVSGKEN**QVQWCDIEEAFHEQSQQSSSFSI*ACGVHDWQGR*DCRLGWNYN 507
Query: 343 R*QKDPGGSSNEGYCPEVHGDSKGQDCQCWWRVPHI*PACSSCSTWREHGPLEGPQECP* 522
* + SS+E C EVH +SKG + W + ++*PA S S EHG E *
Sbjct: 506 **FEGTRDSSHESDCLEVHRESKGSH*ESWR*MLNL*PARSQSSIGPEHGSS*RT*EFT* 327
Query: 523 GSEALWQGSWSAAQPHQAVCALQGKEVREGSWQEEQPWIQGLKQIV 660
SEA SW A Q QA+C+ QGKEVREG +EE+ WIQGL++++
Sbjct: 326 SSEAFRTCSWCATQSLQAICSGQGKEVREGQRKEEESWIQGLRKLL 189
Score = 30.4 bits (60), Expect(2) = 5e-055
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2 / +2
Query: 259 VGFTHEKPLENDSVEIALGPP 197
V F HEKPL+ ++E+A+ P
Sbjct: 590 VDFAHEKPLQYHTIELAISSP 652
>gb|AV827922.1|AV827922 AV827922 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-22-B03 5',
mRNA sequence
Length = 583
Score = 236 bits (510), Expect(3) = 2e-083
Identities = 100/136 (73%), Positives = 116/136 (85%)
Frame = +2 / +2
Query: 74 APAGMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSK 253
A A MGIDL+AGG++KKTKRTAPKSDDVYLKLLVKLYRFLVRR+ SNFNAVILKRLFMSK
Sbjct: 2 ADAAMGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSK 181
Query: 254 TNRPPISMRRLVKFMEGKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAG 433
N+ P+S+ RLV+FM GK+ IAV+VGT+TDD R+ E+PAMKVTALRFTE ARARI AG
Sbjct: 182 VNKAPLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAG 361
Query: 434 GECLTFDQLALRAPLG 481
GECLTF ++ +G
Sbjct: 362 GECLTF*PACSQSSIG 409
Score = 102 bits (218), Expect(3) = 2e-029
Identities = 47/109 (43%), Positives = 68/109 (62%)
Frame = +1 / +1
Query: 115 E*EDQAHCAQV*RCLPQAPRQALPFLGQEDQEQFQRCHSQEAFHE*NQPTTNLHAPPCQV 294
E*EDQ C+ V CLP+A RQALP G+E +Q Q C S++AFHE +Q +++ C+V
Sbjct: 43 E*EDQKDCS*VR*CLPKASRQALPVFGEEI*QQLQCCDSEKAFHEQSQQSSSFTL*ACRV 222
Query: 295 YGRKGEEHCCHCWHSHR*QKDPGGSSNEGYCPEVHGDSKGQDCQCWWRV 441
+ +G + CC W+ H * + S +EGYC EV+ + G + + WWRV
Sbjct: 223 HDWQG*QDCCVGWNYH**FESS*DSCHEGYCLEVY*EG*G*N*ESWWRV 369
Score = 90.4 bits (191), Expect(3) = 2e-083
Identities = 35/40 (87%), Positives = 38/40 (95%)
Frame = +2 / +1
Query: 494 LLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKA 613
LLRGPKN+REAV+HFG APGVPHS+TKPYVR KGRKFEKA
Sbjct: 424 LLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFEKA 543
Score = 84.9 bits (179), Expect(4) = 1e-041
Identities = 41/68 (60%), Positives = 48/68 (70%)
Frame = -3 / -2
Query: 447 VRHSPPALTILALAVSVNLRAVTFIAGTSWILLSSVTVPTMTAMFFSFPSINLTRRRMEI 268
V+HSPPA +ILALA+SVNL+AVTF+AG S L SSV VPT TA+ S P +N T E
Sbjct: 375 VKHSPPAFSILALALSVNLKAVTFMAGIS*TLKSSVIVPTNTAILSSLPVMNSTSLESER 196
Query: 267 GGRLVLLM 244
G L LLM
Sbjct: 195 GALLTLLM 172
Score = 79.9 bits (168), Expect(4) = 3e-025
Identities = 36/82 (43%), Positives = 51/82 (62%)
Frame = -2 / -1
Query: 442 ALATSIDNPGPCCLREPQGSNLHCWNLLDPFVICDCANNDSNVLLLSFHKLDKAAHGDWW 263
AL+TS N P L +PQGSNLH NL++ +I D +N SN+++L+ H+L K
Sbjct: 370 ALSTSFLNSSPSPLSKPQGSNLHGRNLMNSQIISDSSNQHSNLVILASHELYKPRE*KRS 191
Query: 262 SVGFTHEKPLENDSVEIALGPP 197
V F HEKP +N S+E+A+ P
Sbjct: 190 FVDFAHEKPFQNHSIEVAVRSP 125
Score = 78.0 bits (164), Expect(4) = 1e-041
Identities = 32/40 (80%), Positives = 33/40 (82%)
Frame = -3 / -3
Query: 612 AFSNFLPLERTYGLVWLCGTPGALPKCLTASRAFLGPLKR 493
AFSNFLPL TYGLV LCGTPGA PKC TASR F GPL+R
Sbjct: 542 AFSNFLPLCLTYGLVLLCGTPGAGPKCFTASREFFGPLRR 423
Score = 39.1 bits (79), Expect(4) = 3e-025
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = -1 / -1
Query: 608 SRTSFPWSAHTAWCGCAALQEPCQSASLPHGHS 510
S+TSFP++ H A C C A QE ++ASL H S
Sbjct: 538 SQTSFPYA*HMA*CYCVAHQEQVRNASLLHASS 440
Score = 35.9 bits (72), Expect(4) = 1e-041
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = -3 / -2
Query: 141 GAVRLVFLFLPPATRSIPI 85
GAV LVFL LPPA RSIP+
Sbjct: 69 GAVLLVFLLLPPAIRSIPM 13
Score = 35.9 bits (72), Expect(3) = 2e-029
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +2 / +3
Query: 449 FDQLALRAPLGENTV 493
FDQLALRAPLG+NTV
Sbjct: 378 FDQLALRAPLGQNTV 422
Score = 31.3 bits (62), Expect(3) = 2e-029
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = +1 / +3
Query: 508 QECP*GSEALWQGSWSAAQPHQAVCALQGKEVRE 609
+E * SEA SW A Q H A+C GKEV E
Sbjct: 438 KELA*SSEAFRTCSWCATQ*H*AIC*A*GKEV*E 539
Score = 29.9 bits (59), Expect(4) = 1e-041
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -3 / -1
Query: 498 KRTVFSPSGARRASWS 451
+ TVF P+GA RASWS
Sbjct: 427 EETVFCPNGALRASWS 380
Score = 27.6 bits (54), Expect(4) = 3e-025
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -2 / -1
Query: 136 SALGLLIPPTGDEVDTHSCGC 74
S GLL + D++DTH C C
Sbjct: 64 SPFGLLTLTSCDKIDTHGCVC 2
Score = 25.8 bits (50), Expect(4) = 3e-025
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = -2 / -3
Query: 508 GAPQEDRVLAKWSTKSKLVK 449
G + + VL++WS++SKLVK
Sbjct: 437 GPLRRNCVLSQWSSESKLVK 378
Score = 24.4 bits (47), Expect(3) = 2e-083
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +2 / +2
Query: 608 KARGRRNSRGFKV* 649
K RG+R S GFKV*
Sbjct: 539 KPRGKRKSXGFKV* 580
>gb|AC011620.8|ATAC011620 Arabidopsis thaliana chromosome III BAC F18C1 genomic sequence,
complete sequence
Length = 100887
Score = 122 bits (260), Expect(4) = 6e-080
Identities = 51/64 (79%), Positives = 56/64 (87%)
Frame = +2 / -1
Query: 308 EKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPLGEN 487
E IAV+VGT+TDD R+ E+PAMKVTALRFTE ARARI AGGECLTFDQLALRAPLG+N
Sbjct: 84789 EDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFDQLALRAPLGQN 84610
Query: 488 TVLL 499
TV L
Sbjct: 84609 TVFL 84598
Score = 116 bits (249), Expect(4) = 6e-080
Identities = 46/53 (86%), Positives = 51/53 (96%)
Frame = +2 / -1
Query: 491 VLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV* 649
VLLRGPKN+REAV+HFG APGVPHSH+KPYVR+KGRKFEKARG+R SRGFKV*
Sbjct: 84516 VLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKRKSRGFKV* 84358
Score = 105 bits (224), Expect(4) = 5e-045
Identities = 45/55 (81%), Positives = 46/55 (83%)
Frame = -3 / +2
Query: 654 LF*TLNPRLFLLPRAFSNFLPLERTYGLVWLCGTPGALPKCLTASRAFLGPLKRT 490
L *TLNPRLFL P AFSNFLPL RTYGL LCGTPGA PKC TASR FLGPL+RT
Sbjct: 84353 LS*TLNPRLFLFPLAFSNFLPLARTYGLE*LCGTPGAGPKCFTASREFLGPLRRT 84517
Score = 94.5 bits (200), Expect(4) = 5e-045
Identities = 41/65 (63%), Positives = 51/65 (78%)
Frame = -3 / +2
Query: 498 KRTVFSPSGARRASWSNVRHSPPALTILALAVSVNLRAVTFIAGTSWILLSSVTVPTMTA 319
+ TVF P+GA RASWS V+HSPPA ++ ALA+SVNL+AVTF+AG S L SSV VPT TA
Sbjct: 84599 RNTVFWPNGALRASWSKVKHSPPAFSMRALALSVNLKAVTFMAGISCTLKSSVIVPTKTA 84778
Query: 318 MFFSF 304
+ S+
Sbjct: 84779 ILSSY 84793
Score = 79.4 bits (167), Expect(4) = 6e-080
Identities = 32/46 (69%), Positives = 39/46 (84%)
Frame = +2 / -2
Query: 170 LVKLYRFLVRRTKSNFNAVILKRLFMSKTNRPPISMRRLVKFMEGK 307
+++LYRFLVRRT S FN VILKRLFMSK N+ P+S+ RLV+FM GK
Sbjct: 85148 ILQLYRFLVRRTNSKFNGVILKRLFMSKVNKAPLSLSRLVEFMTGK 85011
Score = 74.4 bits (156), Expect(2) = 3e-025
Identities = 31/62 (50%), Positives = 42/62 (67%)
Frame = -2 / +1
Query: 490 RVLAKWSTKSKLVKCEALATSIDNPGPCCLREPQGSNLHCWNLLDPFVICDCANNDSNVL 311
RVLA+WS++S+LVK A +S N PC L EPQGS+ H WNL+ P +I +N D N++
Sbjct: 84607 RVLAQWSSESELVKG*AFTSSFLNASPCSLCEPQGSHFHGWNLVYPQIISYSSNQDGNLI 84786
Query: 310 LL 305
L
Sbjct: 84787 FL 84792
Score = 65.7 bits (137), Expect(4) = 6e-080
Identities = 26/31 (83%), Positives = 30/31 (96%)
Frame = +2 / -1
Query: 89 GIDLVAGGRNKKTKRTAPKSDDVYLKLLVKL 181
GIDL+AGG++KKTKRTAPKSDDVYLKL VK+
Sbjct: 85341 GIDLIAGGKSKKTKRTAPKSDDVYLKLTVKV 85249
Score = 63.4 bits (132), Expect(2) = 3e-025
Identities = 28/53 (52%), Positives = 40/53 (75%)
Frame = -2 / +1
Query: 649 LNLESTAVPPATSLLELPSLGAHIRLGVAVRHSRSLAKVPHCLTGILGAPQED 491
LNLEST +P ++ LLELPSLG +I LGV V H+RS +++ HC T IL + +++
Sbjct: 84358 LNLESTTLPLSSGLLELPSLGPNIWLGVTVWHTRSRSEMLHCFT*ILRSSKKN 84516
Score = 35.4 bits (71), Expect(4) = 5e-045
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -3 / +2
Query: 141 GAVRLVFLFLPPATRSIP 88
GAV LVFL LPPA RSIP
Sbjct: 85289 GAVLLVFLLLPPAIRSIP 85342
Score = 30.4 bits (60), Expect(4) = 5e-045
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2 / +3
Query: 259 VGFTHEKPLENDSVEIALGPP 197
V F HEKPL+ ++E+A+ P
Sbjct: 85059 VDFAHEKPLQYHTIELAISSP 85121
>gb|AC007399.1|AC007399 Arabidopsis thaliana BAC F14I23 from chromosome V near 69 cM,
complete sequence
Length = 105223
Score = 118 bits (253), Expect(4) = 2e-079
Identities = 49/62 (79%), Positives = 55/62 (88%)
Frame = +2 / +3
Query: 308 EKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPLGEN 487
+ IAV+VGT+TDD R+ E+PAMKVTALRFTE ARARI AGGECLTFDQLALRAPLG+N
Sbjct: 3402 DDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFDQLALRAPLGQN 3581
Query: 488 TV 493
TV
Sbjct: 3582 TV 3587
Score = 115 bits (245), Expect(4) = 2e-079
Identities = 46/57 (80%), Positives = 52/57 (91%)
Frame = +2 / +1
Query: 491 VLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV*NKLW 661
VLLRGPKN+REAV+HFG APGVPHS+TKPYVR KGRKFEKARG+R SRGFKV* ++
Sbjct: 3670 VLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFEKARGKRKSRGFKV*EDVF 3840
Score = 99.1 bits (210), Expect(4) = 2e-044
Identities = 42/53 (79%), Positives = 43/53 (81%)
Frame = -3 / -3
Query: 648 *TLNPRLFLLPRAFSNFLPLERTYGLVWLCGTPGALPKCLTASRAFLGPLKRT 490
*TLNPRLF P AFSNFLPL TYGLV LCGTPGA PKC TASR F GPL+RT
Sbjct: 3827 *TLNPRLFRFPLAFSNFLPLCLTYGLVLLCGTPGAGPKCFTASREFFGPLRRT 3669
Score = 95.9 bits (203), Expect(4) = 2e-044
Identities = 43/62 (69%), Positives = 50/62 (80%)
Frame = -3 / -1
Query: 492 TVFSPSGARRASWSNVRHSPPALTILALAVSVNLRAVTFIAGTSWILLSSVTVPTMTAMF 313
TVF P+GA RASWS V+HSPPA +ILALA+SVNL+AVTF+AG S L SSV VPT TA+
Sbjct: 3586 TVFCPNGALRASWSKVKHSPPAFSILALALSVNLKAVTFMAGIS*TLKSSVIVPTNTAIL 3407
Query: 312 FS 307
S
Sbjct: 3406 SS 3401
Score = 80.8 bits (170), Expect(4) = 2e-079
Identities = 33/46 (71%), Positives = 40/46 (86%)
Frame = +2 / +1
Query: 179 LYRFLVRRTKSNFNAVILKRLFMSKTNRPPISMRRLVKFMEGKEKN 316
LYRFLVRR+ SNFNAVILKRLFMSK N+ P+S+ RLV+FM GK ++
Sbjct: 3052 LYRFLVRRSNSNFNAVILKRLFMSKVNKAPLSLSRLVEFMTGKVRS 3189
Score = 68.0 bits (142), Expect(4) = 2e-079
Identities = 27/31 (87%), Positives = 31/31 (100%)
Frame = +2 / +1
Query: 89 GIDLVAGGRNKKTKRTAPKSDDVYLKLLVKL 181
GIDL+AGG++KKTKRTAPKSDDVYLKLLVK+
Sbjct: 2869 GIDLIAGGKSKKTKRTAPKSDDVYLKLLVKV 2961
Score = 35.4 bits (71), Expect(4) = 2e-044
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -3 / -3
Query: 141 GAVRLVFLFLPPATRSIP 88
GAV LVFL LPPA RSIP
Sbjct: 2921 GAVLLVFLLLPPAIRSIP 2868
Score = 34.1 bits (68), Expect(4) = 2e-044
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -2 / -2
Query: 307 LSFHKLDKAAHGDWWSVGFTHEKPLENDSVEIALGPP 197
L+ H+L K V F HEKP +N S+E+A+ P
Sbjct: 3180 LASHELYKPRE*KRSFVDFAHEKPFQNHSIEVAVRSP 3070
>gb|AV535094.1|AV535094 AV535094 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB090h08F 3', mRNA sequence
Length = 596
Score = 277 bits (600), Expect = 3e-073
Identities = 115/147 (78%), Positives = 131/147 (89%)
Frame = +2 / -2
Query: 221 AVILKRLFMSKTNRPPISMRRLVKFMEGKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFT 400
AVILKRLFMSK N+ P+S+ RLV+FM GK+ IAV+VGT+TDD R+ E+PAMKVTALRFT
Sbjct: 595 AVILKRLFMSKVNKAPLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFT 416
Query: 401 ETARARIVNAGGECLTFDQLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPY 580
E ARARI AGGECLTFDQLALRAPLG+NTVLLRGPKN+REAV+HFG APGVPHS+TKPY
Sbjct: 415 ERARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPY 236
Query: 581 VRSKGRKFEKARGRRNSRGFKV*NKLW 661
VR KGRKFEKARG+R SRGFKV* ++
Sbjct: 235 VRHKGRKFEKARGKRKSRGFKV*EDVF 155
Score = 205 bits (442), Expect = 2e-051
Identities = 93/135 (68%), Positives = 102/135 (75%)
Frame = -3 / +3
Query: 648 *TLNPRLFLLPRAFSNFLPLERTYGLVWLCGTPGALPKCLTASRAFLGPLKRTVFSPSGA 469
*TLNPRLF P AFSNFLPL TYGLV LCGTPGA PKC TASR F GPL+RTVF P+GA
Sbjct: 168 *TLNPRLFRFPLAFSNFLPLCLTYGLVLLCGTPGAGPKCFTASREFFGPLRRTVFCPNGA 347
Query: 468 RRASWSNVRHSPPALTILALAVSVNLRAVTFIAGTSWILLSSVTVPTMTAMFFSFPSINL 289
RASWS V+HSPPA +ILALA+SVNL+AVTF+AG S L SSV VPT TA+ S P +N
Sbjct: 348 LRASWSKVKHSPPAFSILALALSVNLKAVTFMAGIS*TLKSSVIVPTNTAILSSLPVMNS 527
Query: 288 TRRRMEIGGRLVLLM 244
T E G L LLM
Sbjct: 528 TSLESERGALLTLLM 572
Score = 134 bits (288), Expect = 3e-030
Identities = 64/143 (44%), Positives = 95/143 (66%)
Frame = -2 / +2
Query: 649 LNLESTAVPPATSLLELPSLGAHIRLGVAVRHSRSLAKVPHCLTGILGAPQEDRVLAKWS 470
L+LEST + ++S L+LPSL +I L V V H+RS +++ HC T +L + +++ VL++WS
Sbjct: 167 LDLESTTLSLSSSFLKLPSLMPNIWLSVTVWHTRSRSEMLHCFTRVLWSSKKNCVLSQWS 346
Query: 469 TKSKLVKCEALATSIDNPGPCCLREPQGSNLHCWNLLDPFVICDCANNDSNVLLLSFHKL 290
++SKLVK AL+TS N P L +PQGSNLH NL++ +I D +N SN+++L+ H+L
Sbjct: 347 SESKLVKG*ALSTSFLNSSPSPLSKPQGSNLHGRNLMNSQIISDSSNQHSNLVILASHEL 526
Query: 289 DKAAHGDWWSVGFTHEKPLENDS 221
K V F HEKP +N S
Sbjct: 527 YKPRE*KRSFVDFAHEKPFQNHS 595
Score = 117 bits (250), Expect = 5e-025
Identities = 57/144 (39%), Positives = 83/144 (57%)
Frame = +1 / -1
Query: 223 CHSQEAFHE*NQPTTNLHAPPCQVYGRKGEEHCCHCWHSHR*QKDPGGSSNEGYCPEVHG 402
C S++AFHE +Q +++ C+V+ +G + CC W+ H * + S +EGYC EV+
Sbjct: 593 CDSEKAFHEQSQQSSSFTL*ACRVHDWQG*QDCCVGWNYH**FESS*DSCHEGYCLEVY* 414
Query: 403 DSKGQDCQCWWRVPHI*PACSSCSTWREHGPLEGPQECP*GSEALWQGSWSAAQPHQAVC 582
+ G + + WWRV ++*PACS S EH +E * SEA SW A Q H A+C
Sbjct: 413 EG*G*N*ESWWRVLNL*PACSQSSIGTEHSSS*RTKELA*SSEAFRTCSWCATQ*H*AIC 234
Query: 583 ALQGKEVREGSWQEEQPWIQGLKQ 654
GKEV E + ++ WIQGL++
Sbjct: 233 *A*GKEV*ES*RKAKESWIQGLRR 162
>gb|AW004212.1|AW004212 701549078 A. thaliana, Columbia Col-0, inflorescence-2 Arabidopsis
thaliana cDNA clone 701549078, mRNA sequence
Length = 578
Score = 275 bits (595), Expect = 1e-072
Identities = 113/140 (80%), Positives = 127/140 (90%)
Frame = +2 / -1
Query: 230 LKRLFMSKTNRPPISMRRLVKFMEGKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETA 409
LKRLFMSK N+ P+S+ RLV+FM GKE IAV+VGT+TDD R+ E+PAMKVTALRFTE A
Sbjct: 578 LKRLFMSKVNKAPLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERA 399
Query: 410 RARIVNAGGECLTFDQLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRS 589
RARI AGGECLTFDQLALRAPLG+NTVLLRGPKN+REAV+HFG APGVPHSH+KPYVR+
Sbjct: 398 RARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRA 219
Query: 590 KGRKFEKARGRRNSRGFKV* 649
KGRKFEKARG+R SRGFKV*
Sbjct: 218 KGRKFEKARGKRKSRGFKV* 159
Score = 207 bits (446), Expect = 5e-052
Identities = 94/137 (68%), Positives = 104/137 (75%)
Frame = -3 / +1
Query: 654 LF*TLNPRLFLLPRAFSNFLPLERTYGLVWLCGTPGALPKCLTASRAFLGPLKRTVFSPS 475
L *TLNPRLFL P AFSNFLPL RTYGL LCGTPGA PKC TASR FLGPL+RTVF P+
Sbjct: 154 LS*TLNPRLFLFPLAFSNFLPLARTYGLE*LCGTPGAGPKCFTASREFLGPLRRTVFWPN 333
Query: 474 GARRASWSNVRHSPPALTILALAVSVNLRAVTFIAGTSWILLSSVTVPTMTAMFFSFPSI 295
GA RASWS V+HSPPA ++ ALA+SVNL+AVTF+AG S L SSV VPT TA+ S P +
Sbjct: 334 GALRASWSKVKHSPPAFSMRALALSVNLKAVTFMAGISCTLKSSVIVPTKTAILSSLPVM 513
Query: 294 NLTRRRMEIGGRLVLLM 244
N T E G L LLM
Sbjct: 514 NSTSLDRERGALLTLLM 564
Score = 142 bits (304), Expect = 2e-032
Identities = 62/122 (50%), Positives = 87/122 (71%)
Frame = -2 / +3
Query: 649 LNLESTAVPPATSLLELPSLGAHIRLGVAVRHSRSLAKVPHCLTGILGAPQEDRVLAKWS 470
LNLEST +P ++ LLELPSLG +I LGV V H+RS +++ HC T IL + +++RVLA+WS
Sbjct: 159 LNLESTTLPLSSGLLELPSLGPNIWLGVTVWHTRSRSEMLHCFT*ILRSSKKNRVLAQWS 338
Query: 469 TKSKLVKCEALATSIDNPGPCCLREPQGSNLHCWNLLDPFVICDCANNDSNVLLLSFHKL 290
++S+LVK A +S N PC L EPQGS+ H WNL+ P +I +N D N++ L+ H+L
Sbjct: 339 SESELVKG*AFTSSFLNASPCSLCEPQGSHFHGWNLVYPQIISYSSNQDGNLIFLASHEL 518
Query: 289 DK 284
K
Sbjct: 519 HK 524
Score = 111 bits (237), Expect = 3e-023
Identities = 58/143 (40%), Positives = 82/143 (57%)
Frame = +1 / -3
Query: 232 QEAFHE*NQPTTNLHAPPCQVYGRKGEEHCCHCWHSHR*QKDPGGSSNEGYCPEVHGDSK 411
+EAFHE +Q +++ C V+ +G C W+ + * + SS+E C EVH +SK
Sbjct: 576 EEAFHEQSQQSSSFSI*ACGVHDWQGR*DCRLGWNYN**FEGTRDSSHESDCLEVHRESK 397
Query: 412 GQDCQCWWRVPHI*PACSSCSTWREHGPLEGPQECP*GSEALWQGSWSAAQPHQAVCALQ 591
G + W + ++*PA S S EHG E * SEA SW A Q QA+C+ Q
Sbjct: 396 GSH*ESWR*MLNL*PARSQSSIGPEHGSS*RT*EFT*SSEAFRTCSWCATQSLQAICSGQ 217
Query: 592 GKEVREGSWQEEQPWIQGLKQIV 660
GKEVREG +EE+ WIQGL++++
Sbjct: 216 GKEVREGQRKEEESWIQGLRKLL 148
>emb|BX832577.1|CNS0A1WZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH81ZE08 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 644
Score = 265 bits (574), Expect = 1e-069
Identities = 109/141 (77%), Positives = 125/141 (88%)
Frame = +2 / +3
Query: 239 LFMSKTNRPPISMRRLVKFMEGKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARAR 418
LFMSK N+ P+S+ RLV+FM GK+ IAV+VGT+TDD R+ E+PAMKVTALRFTE ARAR
Sbjct: 3 LFMSKVNKAPLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARAR 182
Query: 419 IVNAGGECLTFDQLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGR 598
I AGGECLTFDQLALRAPLG+NTVLLRGPKN+REAV+HFG APGVPHS+TKPYVR KGR
Sbjct: 183 IEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGR 362
Query: 599 KFEKARGRRNSRGFKV*NKLW 661
KFEKARG+R SRGFKV* ++
Sbjct: 363 KFEKARGKRKSRGFKV*EDVF 425
Score = 205 bits (442), Expect = 2e-051
Identities = 93/135 (68%), Positives = 102/135 (75%)
Frame = -3 / -2
Query: 648 *TLNPRLFLLPRAFSNFLPLERTYGLVWLCGTPGALPKCLTASRAFLGPLKRTVFSPSGA 469
*TLNPRLF P AFSNFLPL TYGLV LCGTPGA PKC TASR F GPL+RTVF P+GA
Sbjct: 412 *TLNPRLFRFPLAFSNFLPLCLTYGLVLLCGTPGAGPKCFTASREFFGPLRRTVFCPNGA 233
Query: 468 RRASWSNVRHSPPALTILALAVSVNLRAVTFIAGTSWILLSSVTVPTMTAMFFSFPSINL 289
RASWS V+HSPPA +ILALA+SVNL+AVTF+AG S L SSV VPT TA+ S P +N
Sbjct: 232 LRASWSKVKHSPPAFSILALALSVNLKAVTFMAGIS*TLKSSVIVPTNTAILSSLPVMNS 53
Query: 288 TRRRMEIGGRLVLLM 244
T E G L LLM
Sbjct: 52 TSLESERGALLTLLM 8
Score = 125 bits (268), Expect = 2e-027
Identities = 61/137 (44%), Positives = 91/137 (66%)
Frame = -2 / -1
Query: 649 LNLESTAVPPATSLLELPSLGAHIRLGVAVRHSRSLAKVPHCLTGILGAPQEDRVLAKWS 470
L+LEST + ++S L+LPSL +I L V V H+RS +++ HC T +L + +++ VL++WS
Sbjct: 413 LDLESTTLSLSSSFLKLPSLMPNIWLSVTVWHTRSRSEMLHCFTRVLWSSKKNCVLSQWS 234
Query: 469 TKSKLVKCEALATSIDNPGPCCLREPQGSNLHCWNLLDPFVICDCANNDSNVLLLSFHKL 290
++SKLVK AL+TS N P L +PQGSNLH NL++ +I D +N SN+++L+ H+L
Sbjct: 233 SESKLVKG*ALSTSFLNSSPSPLSKPQGSNLHGRNLMNSQIISDSSNQYSNLVILASHEL 54
Query: 289 DKAAHGDWWSVGFTHEK 239
K V F HEK
Sbjct: 53 YKPRE*KRSFVDFAHEK 3
Score = 110 bits (235), Expect = 6e-023
Identities = 55/139 (39%), Positives = 79/139 (56%)
Frame = +1 / +2
Query: 238 AFHE*NQPTTNLHAPPCQVYGRKGEEHCCHCWHSHR*QKDPGGSSNEGYCPEVHGDSKGQ 417
AFHE +Q +++ C+V+ +G + CC W+ H * + S +EGYC EV+ + G
Sbjct: 2 AFHEQSQQSSSFTL*ACRVHDWQG*QDCCIGWNYH**FESS*DSCHEGYCLEVY*EG*G* 181
Query: 418 DCQCWWRVPHI*PACSSCSTWREHGPLEGPQECP*GSEALWQGSWSAAQPHQAVCALQGK 597
+ + WWRV ++*PACS S EH +E * SEA SW A Q H A+C GK
Sbjct: 182 N*ESWWRVLNL*PACSQSSIGTEHSSS*RTKELA*SSEAFRTCSWCATQ*H*AIC*A*GK 361
Query: 598 EVREGSWQEEQPWIQGLKQ 654
EV E + ++ WIQGL++
Sbjct: 362 EV*ES*RKAKESWIQGLRR 418
>gb|AC002535.3| Arabidopsis thaliana chromosome 2 clone T30B22 map CIC06C03, complete
sequence
Length = 98937
Score = 108 bits (231), Expect(4) = 4e-069
Identities = 44/53 (83%), Positives = 46/53 (86%)
Frame = +2 / +1
Query: 491 VLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV* 649
VLLRGPKN REAV+HFG APGVPHSHTKPYVR G+K E ARGRR SRGFKV*
Sbjct: 32584 VLLRGPKNTREAVKHFGPAPGVPHSHTKPYVRQTGKKIEIARGRRRSRGFKV* 32742
Score = 99.1 bits (210), Expect(4) = 4e-069
Identities = 43/53 (81%), Positives = 47/53 (88%)
Frame = +2 / +1
Query: 317 IAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAGGECLTFDQLALRAP 475
IAVIVGTVTDD RI++VPA+ VTALRFTE+ARARI AGGECLTFDQLAL P
Sbjct: 32098 IAVIVGTVTDDVRIEDVPALTVTALRFTESARARIHKAGGECLTFDQLALPCP 32256
Score = 91.3 bits (193), Expect(3) = 8e-036
Identities = 40/53 (75%), Positives = 41/53 (77%)
Frame = -3 / -2
Query: 648 *TLNPRLFLLPRAFSNFLPLERTYGLVWLCGTPGALPKCLTASRAFLGPLKRT 490
*TL P L LLP A S FLP+ RTYGLVWL GTPGA PKC TASR FLGPL RT
Sbjct: 32741 *TLKPLLLLLPLAISIFLPV*RTYGLVWL*GTPGAGPKCFTASRVFLGPLSRT 32583
Score = 84.0 bits (177), Expect(3) = 8e-036
Identities = 41/54 (75%), Positives = 44/54 (81%)
Frame = -3 / -2
Query: 474 GARRASWSNVRHSPPALTILALAVSVNLRAVTFIAGTSWILLSSVTVPTMTAMF 313
G RAS S VRHSPPAL ILALA+SVNL AVT AGTS IL SSVTVPT+TA+F
Sbjct: 32255 GHGRAS*SKVRHSPPALWILALALSVNLNAVTVRAGTSSILTSSVTVPTITAIF 32094
Score = 73.9 bits (155), Expect(4) = 4e-069
Identities = 29/41 (70%), Positives = 37/41 (90%)
Frame = +2 / +3
Query: 185 RFLVRRTKSNFNAVILKRLFMSKTNRPPISMRRLVKFMEGK 307
R+LVRRT+S FNAVILKRLFMSK N+ P+S+ RLV++M+GK
Sbjct: 31863 RYLVRRTESKFNAVILKRLFMSKVNKAPLSLSRLVRYMDGK 31985
Score = 65.7 bits (137), Expect(4) = 4e-069
Identities = 26/31 (83%), Positives = 30/31 (96%)
Frame = +2 / +2
Query: 89 GIDLVAGGRNKKTKRTAPKSDDVYLKLLVKL 181
GIDL+AGG++KKTKRT PKSDDVYLKLLVK+
Sbjct: 31715 GIDLIAGGKSKKTKRTEPKSDDVYLKLLVKV 31807
Score = 34.1 bits (68), Expect(3) = 8e-036
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -3 / -1
Query: 141 GAVRLVFLFLPPATRSIP 88
G+VR VFL LPPA +SIP
Sbjct: 31767 GSVRFVFLLLPPAIKSIP 31714
>gb|BP853538.1|BP853538 BP853538 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-58-J07 5',
mRNA sequence
Length = 396
Score = 245 bits (530), Expect = 1e-063
Identities = 103/130 (79%), Positives = 116/130 (89%)
Frame = +2 / +3
Query: 80 AGMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTN 259
A MGIDL+AGG++KKTKRT PKSDDVYLKLLVKLYRFLVRR+ SNFNAVILKRLFMSK N
Sbjct: 6 AAMGIDLIAGGKSKKTKRTGPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVN 185
Query: 260 RPPISMRRLVKFMEGKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAGGE 439
+ P+S+ RLV+FM GK+ IAV+VGT+TDD R+ E+PAMKVTALRFTE ARARI AGGE
Sbjct: 186 KAPLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGE 365
Query: 440 CLTFDQLALR 469
CLTFDQLALR
Sbjct: 366 CLTFDQLALR 395
Score = 109 bits (232), Expect = 2e-022
Identities = 51/117 (43%), Positives = 74/117 (63%)
Frame = +1 / +2
Query: 115 E*EDQAHCAQV*RCLPQAPRQALPFLGQEDQEQFQRCHSQEAFHE*NQPTTNLHAPPCQV 294
E*EDQ + V CLP+A RQALP G+E +Q Q C S++AFHE +Q +++ C+V
Sbjct: 41 E*EDQKDWS*VR*CLPKASRQALPVFGEEI*QQLQCCDSEKAFHEQSQQSSSFTL*ACRV 220
Query: 295 YGRKGEEHCCHCWHSHR*QKDPGGSSNEGYCPEVHGDSKGQDCQCWWRVPHI*PACS 465
+ +G + CC W+ H * + S +EGYC EV+ + G + + WWRV ++*PACS
Sbjct: 221 HDWQG*QDCCVGWNYH**FESS*DSCHEGYCLEVY*EG*G*N*ESWWRVLNL*PACS 391
Score = 97.7 bits (207), Expect(2) = 3e-023
Identities = 46/74 (62%), Positives = 53/74 (71%)
Frame = -3 / -3
Query: 465 RASWSNVRHSPPALTILALAVSVNLRAVTFIAGTSWILLSSVTVPTMTAMFFSFPSINLT 286
RASWS V+HSPPA +ILALA+SVNL+AVTF+AG S L SSV VPT TA+ S P +N T
Sbjct: 391 RASWSKVKHSPPAFSILALALSVNLKAVTFMAGIS*TLKSSVIVPTNTAILSSLPVMNST 212
Query: 285 RRRMEIGGRLVLLM 244
E G L LLM
Sbjct: 211 SLESERGALLTLLM 170
Score = 33.6 bits (67), Expect(2) = 3e-023
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -3 / -3
Query: 141 GAVRLVFLFLPPATRSIPI 85
G V LVFL LPPA RSIP+
Sbjct: 67 GPVLLVFLLLPPAIRSIPM 11
>gb|BP820622.1|BP820622 BP820622 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-55-C07 5',
mRNA sequence
Length = 397
Score = 243 bits (524), Expect = 9e-063
Identities = 102/130 (78%), Positives = 115/130 (88%)
Frame = +2 / +3
Query: 80 AGMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTN 259
A MGIDL+AGG++KKTKRTAPKSDDVYLKLLVKLYRF VRR+ SNFNAVILKRLFMSK N
Sbjct: 6 AAMGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFWVRRSNSNFNAVILKRLFMSKVN 185
Query: 260 RPPISMRRLVKFMEGKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAGGE 439
+ P+S+ RLV+FM GK+ IAV+VGT+TDD R+ E+PAMKVT LRFTE ARARI AGGE
Sbjct: 186 KAPLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTGLRFTERARARIEKAGGE 365
Query: 440 CLTFDQLALR 469
CLTFDQLALR
Sbjct: 366 CLTFDQLALR 395
Score = 111 bits (236), Expect = 5e-023
Identities = 52/117 (44%), Positives = 75/117 (64%)
Frame = +1 / +2
Query: 115 E*EDQAHCAQV*RCLPQAPRQALPFLGQEDQEQFQRCHSQEAFHE*NQPTTNLHAPPCQV 294
E*EDQ C+ V CLP+A RQALP LG+E +Q Q C S++AFHE +Q +++ C+V
Sbjct: 41 E*EDQKDCS*VR*CLPKASRQALPVLGEEI*QQLQCCDSEKAFHEQSQQSSSFTL*ACRV 220
Query: 295 YGRKGEEHCCHCWHSHR*QKDPGGSSNEGYCPEVHGDSKGQDCQCWWRVPHI*PACS 465
+ +G + CC W+ H * + S +EGY EV+ + G + + WWRV ++*PACS
Sbjct: 221 HDWQG*QDCCVGWNYH**FESS*DSCHEGYWLEVY*EG*G*N*ESWWRVLNL*PACS 391
Score = 96.4 bits (204), Expect(2) = 1e-023
Identities = 46/76 (60%), Positives = 53/76 (69%)
Frame = -3 / -1
Query: 471 ARRASWSNVRHSPPALTILALAVSVNLRAVTFIAGTSWILLSSVTVPTMTAMFFSFPSIN 292
A RASWS V+HSPPA +ILALA+SVNL+ VTF+AG S L SSV VPT TA+ S P +N
Sbjct: 397 ALRASWSKVKHSPPAFSILALALSVNLKPVTFMAGIS*TLKSSVIVPTNTAILSSLPVMN 218
Query: 291 LTRRRMEIGGRLVLLM 244
T E G L LLM
Sbjct: 217 STSLESERGALLTLLM 170
Score = 35.9 bits (72), Expect(2) = 1e-023
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = -3 / -1
Query: 141 GAVRLVFLFLPPATRSIPI 85
GAV LVFL LPPA RSIP+
Sbjct: 67 GAVLLVFLLLPPAIRSIPM 11
>gb|AV552450.1|AV552450 AV552450 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ30a02R 5', mRNA sequence
Length = 408
Score = 213 bits (460), Expect(2) = 5e-062
Identities = 90/113 (79%), Positives = 100/113 (88%)
Frame = +2 / +2
Query: 122 KTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRPPISMRRLVKFME 301
KTKRTAPKSDDVYLKLLVKLYRFLVRR+ SNFNAVILKRLFMSK N+ P+S+ RLV+FM
Sbjct: 2 KTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNKAPLSLSRLVEFMT 181
Query: 302 GKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAGGECLTFDQL 460
GK+ IAV+VGT+TDD R+ E+PAMKVTALRFTE ARARI AGGECLTFD L
Sbjct: 182 GKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFDHL 340
Score = 105 bits (223), Expect = 3e-021
Identities = 50/129 (38%), Positives = 74/129 (57%)
Frame = +1 / +1
Query: 121 EDQAHCAQV*RCLPQAPRQALPFLGQEDQEQFQRCHSQEAFHE*NQPTTNLHAPPCQVYG 300
EDQ C+ V CLP+A RQALP G+E +Q Q C S++AFHE +Q +++ C+V+
Sbjct: 1 EDQKDCS*VR*CLPKASRQALPVFGEEI*QQLQCCDSEKAFHEQSQQSSSFTL*ACRVHD 180
Query: 301 RKGEEHCCHCWHSHR*QKDPGGSSNEGYCPEVHGDSKGQDCQCWWRVPHI*PACSSCSTW 480
+G + CC W+ H * + S +EGYC EV+ + G + + WWRV ++*P
Sbjct: 181 WQG*QDCCVGWNYH**FESS*DSCHEGYCLEVY*EG*G*N*ESWWRVLNL*PLALRAQLG 360
Query: 481 REHGPLEGP 507
+ L GP
Sbjct: 361 QNTVLLRGP 387
Score = 92.3 bits (195), Expect(2) = 3e-023
Identities = 43/73 (58%), Positives = 51/73 (69%)
Frame = -3 / -1
Query: 462 ASWSNVRHSPPALTILALAVSVNLRAVTFIAGTSWILLSSVTVPTMTAMFFSFPSINLTR 283
+ WS V+HSPPA +ILALA+SVNL+AVTF+AG S L SSV VPT TA+ S P +N T
Sbjct: 342 SKWSKVKHSPPAFSILALALSVNLKAVTFMAGIS*TLKSSVIVPTNTAILSSLPVMNSTS 163
Query: 282 RRMEIGGRLVLLM 244
E G L LLM
Sbjct: 162 LESERGALLTLLM 124
Score = 47.3 bits (97), Expect(2) = 5e-062
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +2 / +1
Query: 458 LALRAPLGENTVLLRGPKNAREAV 529
LALRA LG+NTVLLRGP N+REAV
Sbjct: 337 LALRAQLGQNTVLLRGPXNSREAV 408
Score = 39.1 bits (79), Expect(2) = 3e-023
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = -3 / -2
Query: 528 TASRAFLGPLKRTVFSPSGARRAS 457
TASR F GPL+RTVF P+ A RAS
Sbjct: 407 TASREFXGPLRRTVFCPN*ALRAS 336
>gb|BP813190.1|BP813190 BP813190 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-05-K17 5',
mRNA sequence
Length = 405
Score = 234 bits (506), Expect(2) = 1e-061
Identities = 99/129 (76%), Positives = 112/129 (86%)
Frame = +2 / +3
Query: 74 APAGMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSK 253
A A MGIDL+AGG++KKTKRTAPKSDDVYLKLLVKLYRFLVRR+ SNFNAVILKRLFMSK
Sbjct: 3 ADAAMGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSK 182
Query: 254 TNRPPISMRRLVKFMEGKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAG 433
N+ P+S+ RLV+FM GK+ IAV+VGT+TDD R+ E+PAMKVTALRFTE ARARI AG
Sbjct: 183 VNKAPLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAG 362
Query: 434 GECLTFDQL 460
GECLT L
Sbjct: 363 GECLTLTSL 389
Score = 25.4 bits (49), Expect(2) = 1e-061
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +2 / +2
Query: 443 LTFDQLALRAP 475
L FDQLALRAP
Sbjct: 371 LNFDQLALRAP 403
>gb|AV552035.1|AV552035 AV552035 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ19d02R 5', mRNA sequence
Length = 374
Score = 236 bits (509), Expect = 1e-060
Identities = 99/124 (79%), Positives = 112/124 (90%)
Frame = +2 / +2
Query: 113 RNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRPPISMRRLVK 292
++KKTKRTAPKSDDVYLKLLVKLYRFLVRR+ SNFNAVILKRLFMSK N+ P+S+ RLV+
Sbjct: 2 KSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNKAPLSLSRLVE 181
Query: 293 FMEGKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAGGECLTFDQLALRA 472
FM GK+ IAV+VGT+TDD R+ E+PAMKVTALRFTE ARARI AGGECLTFDQLALRA
Sbjct: 182 FMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFDQLALRA 361
Query: 473 PLGE 484
PLG+
Sbjct: 362 PLGQ 373
Score = 115 bits (246), Expect = 2e-024
Identities = 53/120 (44%), Positives = 76/120 (63%)
Frame = +1 / +1
Query: 115 E*EDQAHCAQV*RCLPQAPRQALPFLGQEDQEQFQRCHSQEAFHE*NQPTTNLHAPPCQV 294
E*EDQ C+ V CLP+A RQALP G+E +Q Q C S++AFHE +Q +++ C+V
Sbjct: 4 E*EDQKDCS*VR*CLPKASRQALPVFGEEI*QQLQCCDSEKAFHEQSQQSSSFTL*ACRV 183
Query: 295 YGRKGEEHCCHCWHSHR*QKDPGGSSNEGYCPEVHGDSKGQDCQCWWRVPHI*PACSSCS 474
+ +G + CC W+ H * + S +EGYC EV+ + G + + WWRV ++*PACS S
Sbjct: 184 HDWQG*QDCCVGWNYH**FESS*DSCHEGYCLEVY*EG*G*N*ESWWRVLNL*PACSQSS 363
Score = 105 bits (223), Expect = 3e-021
Identities = 49/79 (62%), Positives = 57/79 (72%)
Frame = -3 / -3
Query: 480 PSGARRASWSNVRHSPPALTILALAVSVNLRAVTFIAGTSWILLSSVTVPTMTAMFFSFP 301
P+GA RASWS V+HSPPA +ILALA+SVNL+AVTF+AG S L SSV VPT TA+ S P
Sbjct: 369 PNGALRASWSKVKHSPPAFSILALALSVNLKAVTFMAGIS*TLKSSVIVPTNTAILSSLP 190
Query: 300 SINLTRRRMEIGGRLVLLM 244
+N T E G L LLM
Sbjct: 189 VMNSTSLESERGALLTLLM 133
>gb|BP844795.1|BP844795 BP844795 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-91-I17 5',
mRNA sequence
Length = 410
Score = 236 bits (509), Expect = 1e-060
Identities = 100/132 (75%), Positives = 111/132 (84%)
Frame = +2 / +3
Query: 62 PSAAAPAGMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRL 241
PS MGIDL+AGG++KKTKRTAPKSDDVYLKL VKLYRFLVRRT S FN VILKRL
Sbjct: 15 PSPQRRTTMGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRL 194
Query: 242 FMSKTNRPPISMRRLVKFMEGKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARI 421
FMSK N+ P+S+ RLV+FM GKE IAV+VGT+TDD R+ E+PAMKVTALRFTE ARARI
Sbjct: 195 FMSKVNKAPLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARI 374
Query: 422 VNAGGECLTFDQ 457
AGGECLTFDQ
Sbjct: 375 EKAGGECLTFDQ 410
Score = 88.1 bits (186), Expect(3) = 2e-025
Identities = 41/71 (57%), Positives = 49/71 (69%)
Frame = -3 / -2
Query: 456 WSNVRHSPPALTILALAVSVNLRAVTFIAGTSWILLSSVTVPTMTAMFFSFPSINLTRRR 277
WS V+HSPPA ++ ALA+SVNL+AVTF+AG S L SSV VPT TA+ S P +N T
Sbjct: 409 WSKVKHSPPAFSMRALALSVNLKAVTFMAGISCTLKSSVIVPTKTAILSSLPVMNSTSLD 230
Query: 276 MEIGGRLVLLM 244
E G L LLM
Sbjct: 229 RERGALLTLLM 197
Score = 37.3 bits (75), Expect(3) = 2e-025
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = -3 / -2
Query: 141 GAVRLVFLFLPPATRSIPI 85
GAV LVFL LPPA RSIPI
Sbjct: 94 GAVLLVFLLLPPAIRSIPI 38
Score = 30.4 bits (60), Expect(3) = 2e-025
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2 / -1
Query: 259 VGFTHEKPLENDSVEIALGPP 197
V F HEKPL+ ++E+A+ P
Sbjct: 212 VDFAHEKPLQYHTIELAISSP 150
>emb|BX823193.1|CNS0A5VT Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB9ZC10 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 575
Score = 232 bits (501), Expect = 1e-059
Identities = 95/114 (83%), Positives = 105/114 (92%)
Frame = +2 / +3
Query: 308 EKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPLGEN 487
E IAV+VGT+TDD R+ E+PAMKVTALRFTE ARARI AGGECLTFDQLALRAPLG+N
Sbjct: 3 EDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFDQLALRAPLGQN 182
Query: 488 TVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV* 649
TVLLRGPKN+REAV+HFG APGVPHSH+KPYVR+KGRKFEKARG+R SRGFKV*
Sbjct: 183 TVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKRKSRGFKV* 344
Score = 194 bits (418), Expect = 4e-048
Identities = 86/116 (74%), Positives = 95/116 (81%)
Frame = -3 / -2
Query: 654 LF*TLNPRLFLLPRAFSNFLPLERTYGLVWLCGTPGALPKCLTASRAFLGPLKRTVFSPS 475
L *TLNPRLFL P AFSNFLPL RTYGL LCGTPGA PKCLTASR FLGPL+RTVF P+
Sbjct: 349 LS*TLNPRLFLFPLAFSNFLPLARTYGLE*LCGTPGAGPKCLTASREFLGPLRRTVFWPN 170
Query: 474 GARRASWSNVRHSPPALTILALAVSVNLRAVTFIAGTSWILLSSVTVPTMTAMFFS 307
GA RASWS V+HSPPA ++ ALA+SVNL+AVTF+AG S L SSV VPT TA+ S
Sbjct: 169 GALRASWSKVKHSPPAFSMRALALSVNLKAVTFMAGISCTLKSSVIVPTKTAILSS 2
Score = 129 bits (277), Expect = 1e-028
Identities = 57/113 (50%), Positives = 81/113 (71%)
Frame = -2 / -1
Query: 649 LNLESTAVPPATSLLELPSLGAHIRLGVAVRHSRSLAKVPHCLTGILGAPQEDRVLAKWS 470
LNLEST +P ++ LLELPSLG +I LGV V H+RS +++ +C T IL + +++RVLA+WS
Sbjct: 344 LNLESTTLPLSSGLLELPSLGPNIWLGVTVWHTRSRSEMLNCFT*ILRSSKKNRVLAQWS 165
Query: 469 TKSKLVKCEALATSIDNPGPCCLREPQGSNLHCWNLLDPFVICDCANNDSNVL 311
++S+LVK A +S N PC L EPQGS+ H WNL+ P +I +N D N++
Sbjct: 164 SESELVKG*AFTSSFLNASPCSLCEPQGSHFHGWNLVYPQIISYSSNQDGNLI 6
>gb|BP857535.1|BP857535 BP857535 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-33-O06 5',
mRNA sequence
Length = 374
Score = 232 bits (500), Expect = 2e-059
Identities = 97/123 (78%), Positives = 110/123 (89%)
Frame = +2 / +3
Query: 80 AGMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTN 259
A MGIDL+AGG++KKTKRTAPKSDDVYLKLLVKLYRFLVRR+ SNFNAVILKRLFMSK N
Sbjct: 6 AAMGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVN 185
Query: 260 RPPISMRRLVKFMEGKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAGGE 439
+ P+S+ RLV+FM GK+ IAV+VGT+TDD R+ E+PAMKVTALRFTE ARARI AGGE
Sbjct: 186 KAPLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGE 365
Query: 440 CLT 448
CLT
Sbjct: 366 CLT 374
>gb|AV542782.1|AV542782 AV542782 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ19d02F 3', mRNA sequence
Length = 419
Score = 231 bits (499), Expect = 2e-059
Identities = 95/119 (79%), Positives = 107/119 (89%)
Frame = +2 / -2
Query: 305 KEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPLGE 484
K+ IAV+VGT+TDD R+ E+PAMKVTALRFTE ARARI AGGECLTFDQLALRAPLG+
Sbjct: 418 KDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFDQLALRAPLGQ 239
Query: 485 NTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV*NKLW 661
NTVLLRGPKN+REAV+HFG APGVPHS+TKPYVR KGRKFEKARG+R SRGFKV* ++
Sbjct: 238 NTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFEKARGKRKSRGFKV*EDVF 62
Score = 189 bits (408), Expect = 9e-047
Identities = 84/114 (73%), Positives = 92/114 (80%)
Frame = -3 / +3
Query: 648 *TLNPRLFLLPRAFSNFLPLERTYGLVWLCGTPGALPKCLTASRAFLGPLKRTVFSPSGA 469
*TLNPRLF P AFSNFLPL TYGLV LCGTPGA PKC TASR F GPL+RTVF P+GA
Sbjct: 75 *TLNPRLFRFPLAFSNFLPLCLTYGLVLLCGTPGAGPKCFTASREFFGPLRRTVFCPNGA 254
Query: 468 RRASWSNVRHSPPALTILALAVSVNLRAVTFIAGTSWILLSSVTVPTMTAMFFS 307
RASWS V+HSPPA +ILALA+SVNL+AVTF+AG S L SSV VPT TA+ S
Sbjct: 255 LRASWSKVKHSPPAFSILALALSVNLKAVTFMAGIS*TLKSSVIVPTNTAILSS 416
Score = 114 bits (244), Expect = 4e-024
Identities = 53/115 (46%), Positives = 81/115 (70%)
Frame = -2 / +2
Query: 649 LNLESTAVPPATSLLELPSLGAHIRLGVAVRHSRSLAKVPHCLTGILGAPQEDRVLAKWS 470
L+LEST + ++S L+LPSL +I L V V H+RS +++ HC T +L + +++ VL++WS
Sbjct: 74 LDLESTTLSLSSSFLKLPSLMPNIWLSVTVWHTRSRSEMLHCFTRVLWSSKKNCVLSQWS 253
Query: 469 TKSKLVKCEALATSIDNPGPCCLREPQGSNLHCWNLLDPFVICDCANNDSNVLLL 305
++SKLVK AL+TS N P L +PQGSNLH NL++ +I D +N SN+++L
Sbjct: 254 SESKLVKG*ALSTSFLNSSPSPLSKPQGSNLHGRNLMNSQIISDSSNQHSNLVIL 418
>gb|BP844305.1|BP844305 BP844305 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-89-O21 5',
mRNA sequence
Length = 398
Score = 216 bits (467), Expect(2) = 4e-059
Identities = 92/119 (77%), Positives = 104/119 (87%)
Frame = +2 / +1
Query: 113 RNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRPPISMRRLVK 292
R ++ KRTAPKSDDVYLKLLVKLYRFLVRR+ SNFNAVILKRLFMSK N+ P+S+ RLV+
Sbjct: 40 RVRRPKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNKAPLSLSRLVE 219
Query: 293 FMEGKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAGGECLTFDQLALR 469
FM GK+ IAV+VGT+TDD R+ E+PAMKVTA RFTE ARARI AGGECLTFDQLALR
Sbjct: 220 FMTGKDDKIAVLVGTITDDLRVHEIPAMKVTAWRFTERARARIEKAGGECLTFDQLALR 396
Score = 106 bits (226), Expect = 1e-021
Identities = 48/113 (42%), Positives = 71/113 (62%)
Frame = +1 / +3
Query: 127 QAHCAQV*RCLPQAPRQALPFLGQEDQEQFQRCHSQEAFHE*NQPTTNLHAPPCQVYGRK 306
Q C+ V CLP+A RQALP G+E +Q Q C S++AFHE +Q +++ C+V+ +
Sbjct: 54 QKDCS*VR*CLPKASRQALPVFGEEI*QQLQCCDSEKAFHEQSQQSSSFTL*ACRVHDWQ 233
Query: 307 GEEHCCHCWHSHR*QKDPGGSSNEGYCPEVHGDSKGQDCQCWWRVPHI*PACS 465
G + CC W+ H * + S +EGYC EV+ + G + + WWRV ++*PACS
Sbjct: 234 G*QDCCVGWNYH**FESS*DSCHEGYCLEVY*EG*G*N*ESWWRVLNL*PACS 392
Score = 98.2 bits (208), Expect(2) = 6e-022
Identities = 47/76 (61%), Positives = 54/76 (71%)
Frame = -3 / -1
Query: 471 ARRASWSNVRHSPPALTILALAVSVNLRAVTFIAGTSWILLSSVTVPTMTAMFFSFPSIN 292
A RASWS V+HSPPA +ILALA+SVNL+AVTF+AG S L SSV VPT TA+ S P +N
Sbjct: 398 ALRASWSKVKHSPPAFSILALALSVNLQAVTFMAGIS*TLKSSVIVPTNTAILSSLPVMN 219
Query: 291 LTRRRMEIGGRLVLLM 244
T E G L LLM
Sbjct: 218 STSLESERGALLTLLM 171
Score = 34.5 bits (69), Expect(2) = 4e-059
Identities = 12/18 (66%), Positives = 17/18 (94%)
Frame = +2 / +3
Query: 80 AGMGIDLVAGGRNKKTKR 133
A MGIDL+AGG++KKT++
Sbjct: 6 AAMGIDLIAGGKSKKTQK 59
Score = 28.6 bits (56), Expect(2) = 6e-022
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -3 / -2
Query: 126 VFLFLPPATRSIPI 85
VFL LPPA RSIP+
Sbjct: 52 VFLLLPPAIRSIPM 11
>gb|BP812879.1|BP812879 BP812879 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-04-L08 5',
mRNA sequence
Length = 406
Score = 228 bits (492), Expect = 2e-058
Identities = 97/129 (75%), Positives = 108/129 (83%)
Frame = +2 / +3
Query: 62 PSAAAPAGMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRL 241
PS MGIDL+AGG++KKTKRTAPKSDDVYLKL VKLYRFLVRRT S FN VILKRL
Sbjct: 15 PSPQRRTTMGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRL 194
Query: 242 FMSKTNRPPISMRRLVKFMEGKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARI 421
FMSK N+ P+S+ RLV+FM GKE IAV+VGT+TDD R+ E+PAMKVTALRFTE ARARI
Sbjct: 195 FMSKVNKAPLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARI 374
Query: 422 VNAGGECLT 448
AGGECLT
Sbjct: 375 EKAGGECLT 401
Score = 81.3 bits (171), Expect(3) = 3e-023
Identities = 39/68 (57%), Positives = 47/68 (69%)
Frame = -3 / -1
Query: 447 VRHSPPALTILALAVSVNLRAVTFIAGTSWILLSSVTVPTMTAMFFSFPSINLTRRRMEI 268
V+HSPPA ++ ALA+SVNL+AVTF+AG S L SSV VPT TA+ S P +N T E
Sbjct: 400 VKHSPPAFSMRALALSVNLKAVTFMAGISCTLKSSVIVPTKTAILSSLPVMNSTSLDRER 221
Query: 267 GGRLVLLM 244
G L LLM
Sbjct: 220 GALLTLLM 197
Score = 37.3 bits (75), Expect(3) = 3e-023
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = -3 / -1
Query: 141 GAVRLVFLFLPPATRSIPI 85
GAV LVFL LPPA RSIPI
Sbjct: 94 GAVLLVFLLLPPAIRSIPI 38
Score = 30.4 bits (60), Expect(3) = 3e-023
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2 / -3
Query: 259 VGFTHEKPLENDSVEIALGPP 197
V F HEKPL+ ++E+A+ P
Sbjct: 212 VDFAHEKPLQYHTIELAISSP 150
>ref|NM_130325.1| Arabidopsis thaliana structural constituent of ribosome AT2G47570
mRNA, complete cds
Length = 408
Score = 132 bits (283), Expect(2) = 3e-058
Identities = 56/85 (65%), Positives = 68/85 (80%)
Frame = +2 / +1
Query: 245 MSKTNRPPISMRRLVKFMEGKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIV 424
MSK N+ P+S+ RLV++M+GK+ IAVIVGTVTDD RI++VPA+ VTALRFTE+ARARI
Sbjct: 1 MSKVNKAPLSLSRLVRYMDGKDGKIAVIVGTVTDDVRIEDVPALTVTALRFTESARARIH 180
Query: 425 NAGGECLTFDQLALRAPLGENTVLL 499
AGGECLTFDQLAL P +L
Sbjct: 181 KAGGECLTFDQLALPCPTWSENTVL 255
Score = 116 bits (247), Expect(2) = 3e-058
Identities = 47/56 (83%), Positives = 49/56 (87%)
Frame = +2 / +1
Query: 482 ENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV* 649
ENTVLLRGPKN REAV+HFG APGVPHSHTKPYVR G+K E ARGRR SRGFKV*
Sbjct: 241 ENTVLLRGPKNTREAVKHFGPAPGVPHSHTKPYVRQTGKKIEIARGRRRSRGFKV* 408
Score = 102 bits (217), Expect(2) = 9e-044
Identities = 51/76 (67%), Positives = 56/76 (73%)
Frame = -3 / -2
Query: 474 GARRASWSNVRHSPPALTILALAVSVNLRAVTFIAGTSWILLSSVTVPTMTAMFFSFPSI 295
G RAS S VRHSPPAL ILALA+SVNL AVT AGTS IL SSVTVPT+TA+F SFPS+
Sbjct: 230 GHGRAS*SKVRHSPPALWILALALSVNLNAVTVRAGTSSILTSSVTVPTITAIFPSFPSM 51
Query: 294 NLTRRRMEIGGRLVLL 247
TRR + G LL
Sbjct: 50 YRTRRERDSGALFTLL 3
Score = 97.7 bits (207), Expect(2) = 9e-044
Identities = 43/56 (76%), Positives = 44/56 (78%)
Frame = -3 / -2
Query: 648 *TLNPRLFLLPRAFSNFLPLERTYGLVWLCGTPGALPKCLTASRAFLGPLKRTVFS 481
*TL P L LLP A S FLP+ RTYGLVWL GTPGA PKC TASR FLGPL RTVFS
Sbjct: 407 *TLKPLLLLLPLAISIFLPV*RTYGLVWL*GTPGAGPKCFTASRVFLGPLSRTVFS 240
>gb|BP798427.1|BP798427 BP798427 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-07-D19 5',
mRNA sequence
Length = 403
Score = 226 bits (489), Expect = 6e-058
Identities = 96/129 (74%), Positives = 108/129 (83%)
Frame = +2 / +2
Query: 62 PSAAAPAGMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRL 241
PS MGIDL+AGG++KKTKRTAPKSDDVYLKL VKLYRFLVRRT S FN VILKRL
Sbjct: 17 PSPQRRTKMGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRL 196
Query: 242 FMSKTNRPPISMRRLVKFMEGKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARI 421
FMSK N+ P+S+ RLV+FM GKE IAV+VGT+TDD R+ E+PAMKVTALRFTE ARAR+
Sbjct: 197 FMSKVNKAPLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARM 376
Query: 422 VNAGGECLT 448
AGGECLT
Sbjct: 377 EKAGGECLT 403
Score = 81.3 bits (171), Expect(3) = 3e-023
Identities = 39/68 (57%), Positives = 47/68 (69%)
Frame = -3 / -2
Query: 447 VRHSPPALTILALAVSVNLRAVTFIAGTSWILLSSVTVPTMTAMFFSFPSINLTRRRMEI 268
V+HSPPA ++ ALA+SVNL+AVTF+AG S L SSV VPT TA+ S P +N T E
Sbjct: 402 VKHSPPAFSMRALALSVNLKAVTFMAGISCTLKSSVIVPTKTAILSSLPVMNSTSLDRER 223
Query: 267 GGRLVLLM 244
G L LLM
Sbjct: 222 GALLTLLM 199
Score = 37.3 bits (75), Expect(3) = 3e-023
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = -3 / -2
Query: 141 GAVRLVFLFLPPATRSIPI 85
GAV LVFL LPPA RSIPI
Sbjct: 96 GAVLLVFLLLPPAIRSIPI 40
Score = 30.4 bits (60), Expect(3) = 3e-023
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2 / -1
Query: 259 VGFTHEKPLENDSVEIALGPP 197
V F HEKPL+ ++E+A+ P
Sbjct: 214 VDFAHEKPLQYHTIELAISSP 152
>gb|BP796897.1|BP796897 BP796897 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-01-E12 5',
mRNA sequence
Length = 393
Score = 179 bits (385), Expect(2) = 7e-058
Identities = 75/98 (76%), Positives = 86/98 (87%)
Frame = +2 / +1
Query: 173 VKLYRFLVRRTKSNFNAVILKRLFMSKTNRPPISMRRLVKFMEGKEKNIAVIVGTVTDDK 352
+KLYRFLVRR+ SNFNAVILKRLFMSK N+ P+S+ RLV+FM GK+ IAV+VGT+TDD
Sbjct: 100 LKLYRFLVRRSNSNFNAVILKRLFMSKVNKAPLSLSRLVEFMTGKDDKIAVLVGTITDDL 279
Query: 353 RIQEVPAMKVTALRFTETARARIVNAGGECLTFDQLAL 466
R+ E+PAMKVTALRFTE ARARI AGGECLTFDQLAL
Sbjct: 280 RVHEIPAMKVTALRFTERARARIEKAGGECLTFDQLAL 393
Score = 97.7 bits (207), Expect(2) = 5e-024
Identities = 46/74 (62%), Positives = 53/74 (71%)
Frame = -3 / -2
Query: 465 RASWSNVRHSPPALTILALAVSVNLRAVTFIAGTSWILLSSVTVPTMTAMFFSFPSINLT 286
RASWS V+HSPPA +ILALA+SVNL+AVTF+AG S L SSV VPT TA+ S P +N T
Sbjct: 392 RASWSKVKHSPPAFSILALALSVNLKAVTFMAGIS*TLKSSVIVPTNTAILSSLPVMNST 213
Query: 285 RRRMEIGGRLVLLM 244
E G L LLM
Sbjct: 212 SLESERGALLTLLM 171
Score = 68.0 bits (142), Expect(2) = 7e-058
Identities = 27/33 (81%), Positives = 31/33 (93%)
Frame = +2 / +3
Query: 80 AGMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVK 178
A MGIDL+AGG++KKTKRTAPKSDDVYLKLL +
Sbjct: 6 AAMGIDLIAGGKSKKTKRTAPKSDDVYLKLLAQ 104
Score = 35.9 bits (72), Expect(2) = 5e-024
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = -3 / -3
Query: 141 GAVRLVFLFLPPATRSIPI 85
GAV LVFL LPPA RSIP+
Sbjct: 67 GAVLLVFLLLPPAIRSIPM 11
>gb|BP814189.1|BP814189 BP814189 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-34-O05 5',
mRNA sequence
Length = 394
Score = 226 bits (487), Expect = 1e-057
Identities = 94/122 (77%), Positives = 108/122 (88%)
Frame = +2 / +3
Query: 80 AGMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTN 259
A MGIDL+AGG++KKTKRTAPKSDDVYLKLLVKLYRF VRR+ SNFNAVILKRLFMSK N
Sbjct: 6 AAMGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFWVRRSNSNFNAVILKRLFMSKVN 185
Query: 260 RPPISMRRLVKFMEGKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAGGE 439
+ P+S+ RLV+FM GK+ IAV+VGT+TDD R+ E+PAMKVTALRFTE ARAR+ AGGE
Sbjct: 186 KAPLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARLEKAGGE 365
Query: 440 CL 445
CL
Sbjct: 366 CL 371
Score = 103 bits (220), Expect = 7e-021
Identities = 48/109 (44%), Positives = 68/109 (62%)
Frame = +1 / +2
Query: 115 E*EDQAHCAQV*RCLPQAPRQALPFLGQEDQEQFQRCHSQEAFHE*NQPTTNLHAPPCQV 294
E*EDQ C+ V CLP+A RQALP LG+E +Q Q C S++AFHE +Q +++ C+V
Sbjct: 41 E*EDQKDCS*VR*CLPKASRQALPVLGEEI*QQLQCCDSEKAFHEQSQQSSSFTL*ACRV 220
Query: 295 YGRKGEEHCCHCWHSHR*QKDPGGSSNEGYCPEVHGDSKGQDCQCWWRV 441
+ +G + CC W+ H * + S +EGYC EV+ + G + WWRV
Sbjct: 221 HDWQG*QDCCVGWNYH**FESS*DSCHEGYCLEVY*EG*G*T*ESWWRV 367
>gb|BP586227.1|BP586227 BP586227 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-05-H23 3',
mRNA sequence
Length = 460
Score = 225 bits (486), Expect = 1e-057
Identities = 91/109 (83%), Positives = 102/109 (93%)
Frame = +2 / -2
Query: 323 VIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPLGENTVLLR 502
++VGT+TDD R+ E+PAMKVTALRFTE ARARI AGGECLTFDQLALRAPLG+NTVLLR
Sbjct: 456 LLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFDQLALRAPLGQNTVLLR 277
Query: 503 GPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV* 649
GPKN+REAV+HFG APGVPHSH+KPYVR+KGRKFEKARG+R SRGFKV*
Sbjct: 276 GPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKRKSRGFKV* 130
Score = 187 bits (403), Expect = 4e-046
Identities = 82/109 (75%), Positives = 90/109 (82%)
Frame = -3 / +2
Query: 654 LF*TLNPRLFLLPRAFSNFLPLERTYGLVWLCGTPGALPKCLTASRAFLGPLKRTVFSPS 475
L *TLNPRLFL P AFSNFLPL RTYGL LCGTPGA PKC TASR FLGPL+RTVF P+
Sbjct: 125 LS*TLNPRLFLFPLAFSNFLPLARTYGLE*LCGTPGAGPKCFTASREFLGPLRRTVFWPN 304
Query: 474 GARRASWSNVRHSPPALTILALAVSVNLRAVTFIAGTSWILLSSVTVPT 328
GA RASWS V+HSPPA ++ ALA+SVNL+AVTF+AG S L SSV VPT
Sbjct: 305 GALRASWSKVKHSPPAFSMRALALSVNLKAVTFMAGISCTLKSSVIVPT 451
Score = 127 bits (271), Expect = 7e-028
Identities = 56/109 (51%), Positives = 78/109 (71%)
Frame = -2 / +1
Query: 649 LNLESTAVPPATSLLELPSLGAHIRLGVAVRHSRSLAKVPHCLTGILGAPQEDRVLAKWS 470
LNLEST +P ++ LLELPSLG +I LGV V H+RS +++ HC T IL + +++RVLA+WS
Sbjct: 130 LNLESTTLPLSSGLLELPSLGPNIWLGVTVWHTRSRSEMLHCFT*ILRSSKKNRVLAQWS 309
Query: 469 TKSKLVKCEALATSIDNPGPCCLREPQGSNLHCWNLLDPFVICDCANND 323
++S+LVK A +S N PC L EPQGS+ H WNL+ P +I +N +
Sbjct: 310 SESELVKG*AFTSSFLNASPCSLCEPQGSHFHGWNLVYPQIISYSSNQE 456
>gb|BP864195.1|BP864195 BP864195 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-69-H08 5',
mRNA sequence
Length = 371
Score = 225 bits (486), Expect = 1e-057
Identities = 94/122 (77%), Positives = 108/122 (88%)
Frame = +2 / +3
Query: 80 AGMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTN 259
A MGIDL+AGG++KKTKRTAPKSDDVYLKLLVKLYRF VRR+ SNFNAVILKRLFMSK N
Sbjct: 6 AAMGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFWVRRSNSNFNAVILKRLFMSKVN 185
Query: 260 RPPISMRRLVKFMEGKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAGGE 439
+ P+S+ RLV+FM GK+ +AV+VGT+TDD R+ E+PAMKVTALRFTE ARARI AGGE
Sbjct: 186 KAPLSLSRLVEFMTGKDDKMAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGE 365
Query: 440 CL 445
CL
Sbjct: 366 CL 371
Score = 99.1 bits (210), Expect(2) = 5e-021
Identities = 47/109 (43%), Positives = 68/109 (62%)
Frame = +1 / +2
Query: 115 E*EDQAHCAQV*RCLPQAPRQALPFLGQEDQEQFQRCHSQEAFHE*NQPTTNLHAPPCQV 294
E*EDQ C+ V CLP+A RQALP LG+E +Q Q C S++AFHE +Q +++ C+V
Sbjct: 41 E*EDQKDCS*VR*CLPKASRQALPVLGEEI*QQLQCCDSEKAFHEQSQQSSSFTL*ACRV 220
Query: 295 YGRKGEEHCCHCWHSHR*QKDPGGSSNEGYCPEVHGDSKGQDCQCWWRV 441
+ +G + C W+ H * + S +EGYC EV+ + G + + WWRV
Sbjct: 221 HDWQG*QDGCVGWNYH**FESS*DSCHEGYCLEVY*EG*G*N*ESWWRV 367
Score = 24.4 bits (47), Expect(2) = 5e-021
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3 / +1
Query: 75 HPQEWVSTSSPVGGIRRPSAL 137
H Q WVS S +RRP L
Sbjct: 1 HTQPWVSILSQEVRVRRPKGL 63
>gb|AV538046.1|AV538046 AV538046 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ109e04F 3', mRNA sequence
Length = 560
Score = 224 bits (483), Expect = 4e-057
Identities = 91/107 (85%), Positives = 100/107 (93%)
Frame = +2 / -1
Query: 329 VGTVTDDKRIQEVPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPLGENTVLLRGP 508
VGT+TDD R+ E+PAMKVTALRFTE ARARI AGGECLTFDQLALRAPLG+NTVLLRGP
Sbjct: 560 VGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFDQLALRAPLGQNTVLLRGP 381
Query: 509 KNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV* 649
KN+REAV+HFG APGVPHSH+KPYVR+KGRKFEKARG+R SRGFKV*
Sbjct: 380 KNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKRKSRGFKV* 240
Score = 185 bits (398), Expect = 2e-045
Identities = 81/108 (75%), Positives = 89/108 (82%)
Frame = -3 / +1
Query: 654 LF*TLNPRLFLLPRAFSNFLPLERTYGLVWLCGTPGALPKCLTASRAFLGPLKRTVFSPS 475
L *TLNPRLFL P AFSNFLPL RTYGL LCGTPGA PKC TASR FLGPL+RTVF P+
Sbjct: 235 LS*TLNPRLFLFPLAFSNFLPLARTYGLE*LCGTPGAGPKCFTASREFLGPLRRTVFWPN 414
Query: 474 GARRASWSNVRHSPPALTILALAVSVNLRAVTFIAGTSWILLSSVTVP 331
GA RASWS V+HSPPA ++ ALA+SVNL+AVTF+AG S L SSV VP
Sbjct: 415 GALRASWSKVKHSPPAFSMRALALSVNLKAVTFMAGISCTLKSSVIVP 558
Score = 126 bits (269), Expect = 1e-027
Identities = 56/107 (52%), Positives = 77/107 (71%)
Frame = -2 / +3
Query: 649 LNLESTAVPPATSLLELPSLGAHIRLGVAVRHSRSLAKVPHCLTGILGAPQEDRVLAKWS 470
LNLEST +P ++ LLELPSLG +I LGV V H+RS +++ HC T IL + +++RVLA+WS
Sbjct: 240 LNLESTTLPLSSGLLELPSLGPNIWLGVTVWHTRSRSEMLHCFT*ILRSSKKNRVLAQWS 419
Query: 469 TKSKLVKCEALATSIDNPGPCCLREPQGSNLHCWNLLDPFVICDCAN 329
++S+LVK A +S N PC L EPQGS+ H WNL+ P +I +N
Sbjct: 420 SESELVKG*AFTSSFLNASPCSLCEPQGSHFHGWNLVYPQIISYSSN 560
>gb|BP823019.1|BP823019 BP823019 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-63-K09 5',
mRNA sequence
Length = 377
Score = 221 bits (478), Expect = 2e-056
Identities = 93/124 (75%), Positives = 107/124 (86%)
Frame = +2 / +1
Query: 74 APAGMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSK 253
A A MGIDL+AGG++KK KRTAPKSDDVYLKLLVKLYRF VRR+ SNFNAVILKRLFMSK
Sbjct: 4 ADAAMGIDLIAGGKSKKNKRTAPKSDDVYLKLLVKLYRFWVRRSNSNFNAVILKRLFMSK 183
Query: 254 TNRPPISMRRLVKFMEGKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAG 433
N+ P+S+ RLV+ M GK+ +AV+VGT+TDD R+ E+PAMKVTALRFTE ARARI AG
Sbjct: 184 VNKAPLSLSRLVELMTGKDDKMAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAG 363
Query: 434 GECL 445
GECL
Sbjct: 364 GECL 375
>gb|BP868224.1|BP868224 BP868224 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-83-K01 5',
mRNA sequence
Length = 379
Score = 193 bits (417), Expect(2) = 8e-056
Identities = 80/103 (77%), Positives = 93/103 (90%)
Frame = +2 / +3
Query: 80 AGMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTN 259
A MGIDL+AGG++KKTKRTAPKSDDVYLKLLVKLYRFLVRR+ SNFNAVILKRLFMSK N
Sbjct: 6 AAMGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVN 185
Query: 260 RPPISMRRLVKFMEGKEKNIAVIVGTVTDDKRIQEVPAMKVTA 388
+ P+S+ RLV+FM GK+ IAV+VGT+TDD R+ E+PAMKVTA
Sbjct: 186 KAPLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTA 314
Score = 62.5 bits (130), Expect(3) = 9e-021
Identities = 27/64 (42%), Positives = 40/64 (62%)
Frame = -2 / -3
Query: 388 GSNLHCWNLLDPFVICDCANNDSNVLLLSFHKLDKAAHGDWWSVGFTHEKPLENDSVEIA 209
GSNLH NL++ +I D +N SN+++L+ H+L K V F HEKP +N S+E+A
Sbjct: 314 GSNLHGRNLMNSQIISDSSNQHSNLVILASHELYKPRE*KRSFVDFAHEKPFQNHSIEVA 135
Query: 208 LGPP 197
+ P
Sbjct: 134 VRSP 123
Score = 46.4 bits (95), Expect(2) = 8e-056
Identities = 19/22 (86%), Positives = 19/22 (86%)
Frame = +2 / +2
Query: 389 LRFTETARARIVNAGGECLTFD 454
LRFTE ARARI AGGECLTFD
Sbjct: 314 LRFTERARARIEKAGGECLTFD 379
Score = 41.8 bits (85), Expect(3) = 9e-021
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = -3 / -2
Query: 453 SNVRHSPPALTILALAVSVNLR 388
S V+HSPPA +ILALA+SVNLR
Sbjct: 378 SKVKHSPPAFSILALALSVNLR 313
Score = 35.9 bits (72), Expect(3) = 9e-021
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = -3 / -1
Query: 141 GAVRLVFLFLPPATRSIPI 85
GAV LVFL LPPA RSIP+
Sbjct: 67 GAVLLVFLLLPPAIRSIPM 11
>gb|AV543075.1|AV543075 AV543075 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ196h10F 3', mRNA sequence
Length = 449
Score = 219 bits (473), Expect = 9e-056
Identities = 89/105 (84%), Positives = 98/105 (93%)
Frame = +2 / -1
Query: 335 TVTDDKRIQEVPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPLGENTVLLRGPKN 514
T+TDD R+ E+PAMKVTALRFTE ARARI AGGECLTFDQLALRAPLG+NTVLLRGPKN
Sbjct: 449 TITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKN 270
Query: 515 AREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV* 649
+REAV+HFG APGVPHSH+KPYVR+KGRKFEKARG+R SRGFKV*
Sbjct: 269 SREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKRKSRGFKV* 135
Score = 180 bits (388), Expect = 5e-044
Identities = 79/105 (75%), Positives = 87/105 (82%)
Frame = -3 / +1
Query: 654 LF*TLNPRLFLLPRAFSNFLPLERTYGLVWLCGTPGALPKCLTASRAFLGPLKRTVFSPS 475
L *TLNPRLFL P AFSNFLPL RTYGL LCGTPGA PKC TASR FLGPL+RTVF P+
Sbjct: 130 LS*TLNPRLFLFPLAFSNFLPLARTYGLE*LCGTPGAGPKCFTASREFLGPLRRTVFWPN 309
Query: 474 GARRASWSNVRHSPPALTILALAVSVNLRAVTFIAGTSWILLSSV 340
GA RASWS V+HSPPA ++ ALA+SVNL+AVTF+AG S L SSV
Sbjct: 310 GALRASWSKVKHSPPAFSMRALALSVNLKAVTFMAGISCTLKSSV 444
Score = 125 bits (267), Expect = 2e-027
Identities = 55/102 (53%), Positives = 75/102 (73%)
Frame = -2 / +3
Query: 649 LNLESTAVPPATSLLELPSLGAHIRLGVAVRHSRSLAKVPHCLTGILGAPQEDRVLAKWS 470
LNLEST +P ++ LLELPSLG +I LGV V H+RS +++ HC T IL + +++RVLA+WS
Sbjct: 135 LNLESTTLPLSSGLLELPSLGPNIWLGVTVWHTRSRSEMLHCFT*ILRSSKKNRVLAQWS 314
Query: 469 TKSKLVKCEALATSIDNPGPCCLREPQGSNLHCWNLLDPFVI 344
++S+LVK A +S N PC L EPQGS+ H WNL+ P +I
Sbjct: 315 SESELVKG*AFTSSFLNASPCSLCEPQGSHFHGWNLVYPQII 440
>gb|BP798204.1|BP798204 BP798204 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-06-G07 5',
mRNA sequence
Length = 386
Score = 136 bits (292), Expect(2) = 1e-055
Identities = 57/71 (80%), Positives = 65/71 (91%)
Frame = +2 / +3
Query: 80 AGMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTN 259
A MGIDL+AGG++KKTKRTAPKSDDVYLKLLVKLYRF VRR+ SNFNAVILKRLFMSK N
Sbjct: 6 AAMGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFWVRRSNSNFNAVILKRLFMSKVN 185
Query: 260 RPPISMRRLVK 292
+ P+S+ RLV+
Sbjct: 186 KAPLSLSRLVE 218
Score = 102 bits (218), Expect(2) = 1e-055
Identities = 42/57 (73%), Positives = 48/57 (84%)
Frame = +2 / +2
Query: 290 KFMEGKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAGGECLTFDQL 460
+ M GK+ IAV+VGT+TDD R+ E+PAMKVTALRFTE ARARI AGGECLTFDQL
Sbjct: 215 RVMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFDQL 385
Score = 83.1 bits (175), Expect(3) = 4e-024
Identities = 38/63 (60%), Positives = 47/63 (74%)
Frame = -3 / -3
Query: 459 SWSNVRHSPPALTILALAVSVNLRAVTFIAGTSWILLSSVTVPTMTAMFFSFPSINLTRR 280
SWS V+HSPPA +ILALA+SVNL+AVTF+AG S L SSV VPT TA+ S P + L
Sbjct: 384 SWSKVKHSPPAFSILALALSVNLKAVTFMAGIS*TLKSSVIVPTNTAILSSLPVMTLQA* 205
Query: 279 RME 271
R++
Sbjct: 204 RVK 196
Score = 35.9 bits (72), Expect(3) = 4e-024
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = -3 / -2
Query: 141 GAVRLVFLFLPPATRSIPI 85
GAV LVFL LPPA RSIP+
Sbjct: 67 GAVLLVFLLLPPAIRSIPM 11
Score = 32.7 bits (65), Expect(3) = 4e-024
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2 / -1
Query: 259 VGFTHEKPLENDSVEIALGPP 197
V F HEKP +N S+E+A+ P
Sbjct: 185 VDFAHEKPFQNHSIEVAVRSP 123
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,884,117,632
Number of Sequences: 1013581
Number of extensions: 27685758
Number of successful extensions: 175159
Number of sequences better than 1.0e-020: 291
length of database: 302,980,290
effective HSP length: 56
effective length of database: 246,219,754
effective search space used: 60323839730
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)