TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2440419.2.1
(616 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 144 5e-060
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 144 5e-060
gb|AC140977.1| Arabidopsis thaliana chromosome 5 BAC F13M11... 144 5e-060
gb|AC069325.6|AC069325 Genomic Sequence For Arabidopsis tha... 144 5e-060
gb|BT000672.1| Arabidopsis thaliana At5g21105 mRNA sequence 144 5e-060
gb|AY057577.1| Arabidopsis thaliana At5g21105 mRNA sequence 144 5e-060
dbj|AB004798.1| Arabidopsis thaliana mRNA for ascorbate oxi... 144 5e-060
gb|AY050406.1| Arabidopsis thaliana AT5g21100/T10F18_130 mR... 144 5e-060
ref|NM_147871.1| Arabidopsis thaliana L-ascorbate oxidase/ ... 144 5e-060
gb|BT001074.1| Arabidopsis thaliana At5g21100/T10F18_130 mR... 144 5e-060
gb|CB253875.1|CB253875 85-E012998-019-004-I22-T7R MPIZ-ADIS... 144 5e-060
gb|BT000738.1| Arabidopsis thaliana At5g21105 mRNA sequence 143 9e-060
emb|BX829850.1|CNS0A02W Arabidopsis thaliana Full-length cD... 144 8e-059
gb|CB255020.1|CB255020 53-E018440-019-009-J14-T7R MPIZ-ADIS... 142 5e-056
ref|NM_122118.4| Arabidopsis thaliana copper ion binding AT... 124 1e-053
gb|AY099586.1| Arabidopsis thaliana ascorbate oxidase-like ... 124 1e-053
gb|BT003407.1| Arabidopsis thaliana ascorbate oxidase-like ... 124 1e-053
emb|AX506980.1| Sequence 1675 from Patent WO0216655 124 1e-053
emb|AX652003.1| Sequence 892 from Patent WO03000898 124 1e-053
emb|BX829653.1|CNS0A09E Arabidopsis thaliana Full-length cD... 124 1e-052
gb|CB253893.1|CB253893 85-E018438-019-009-I22-T7R MPIZ-ADIS... 109 3e-049
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 105 4e-046
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 105 4e-046
emb|AL035708.2|ATT5J17 Arabidopsis thaliana DNA chromosome ... 105 4e-046
emb|AL161596.2|ATCHRIV92 Arabidopsis thaliana DNA chromosom... 105 4e-046
emb|AL022605.3|ATT19P19 Arabidopsis thaliana DNA chromosome... 105 4e-046
ref|NM_120146.3| Arabidopsis thaliana copper ion binding AT... 105 5e-046
gb|BT015360.1| Arabidopsis thaliana At4g39830 gene, complet... 105 5e-046
gb|BT015885.1| Arabidopsis thaliana At4g39830 gene, complet... 105 5e-046
gb|AV440044.2|AV440044 AV440044 Arabidopsis thaliana above-... 124 3e-043
gb|AV532290.1|AV532290 AV532290 Arabidopsis thaliana flower... 124 3e-043
gb|BP569184.1|BP569184 BP569184 RAFL14 Arabidopsis thaliana... 133 2e-039
emb|BX827889.1|CNS0A49W Arabidopsis thaliana Full-length cD... 88 1e-037
gb|AV814534.1|AV814534 AV814534 RAFL9 Arabidopsis thaliana ... 144 2e-033
emb|BX829049.1|CNS0A3G7 Arabidopsis thaliana Full-length cD... 104 4e-033
gb|BP783770.1|BP783770 BP783770 RAFL7 Arabidopsis thaliana ... 124 6e-031
gb|AV531619.1|AV531619 AV531619 Arabidopsis thaliana flower... 136 7e-031
gb|BH755890.1|BH755890 SALK_052459.53.00.x Arabidopsis thal... 91 4e-028
gb|BP597588.1|BP597588 BP597588 RAFL15 Arabidopsis thaliana... 127 4e-028
gb|CC798461.1|CC798461 SALK_146378.40.50.x Arabidopsis thal... 100 1e-027
gb|BP589170.1|BP589170 BP589170 RAFL15 Arabidopsis thaliana... 123 2e-027
gb|CC793956.1|CC793956 SALK_039183.39.45.x Arabidopsis thal... 111 3e-023
gb|AV808705.1|AV808705 AV808705 RAFL9 Arabidopsis thaliana ... 84 3e-022
gb|CW840249.1|CW840249 GT9688.Ds5.04.09.2003.jw93.376 Arabi... 104 3e-021
gb|AI996008.1|AI996008 701549640 A. thaliana, Columbia Col-... 103 6e-021
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 144 bits (309), Expect(2) = 5e-060
Identities = 50/74 (67%), Positives = 62/74 (83%)
Frame = -3 / +3
Query: 341 NLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDLVAKVP 162
NL++PPLRNTA+++PYGWT +RFV DNPGVW FHCHIEPHLHMGMGV+FAE ++ + KVP
Sbjct: 7177173 NLKNPPLRNTAILYPYGWTAIRFVTDNPGVWFFHCHIEPHLHMGMGVVFAEGLNRIGKVP 7177352
Query: 161 NEAVSCGAXATALM 120
+EA+ CG LM
Sbjct: 7177353 DEALGCGLTKQFLM 7177394
Score = 124 bits (266), Expect(2) = 1e-052
Identities = 42/59 (71%), Positives = 51/59 (86%)
Frame = -3 / +2
Query: 341 NLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDLVAKV 165
NL++PPLRNT V++P+GWT +RFV DNPGVW FHCHIEPHLHMGMGV+F E VD + K+
Sbjct: 7170476 NLKNPPLRNTVVLYPFGWTAIRFVTDNPGVWFFHCHIEPHLHMGMGVVFVEGVDRIGKM 7170652
Score = 109 bits (232), Expect(2) = 5e-060
Identities = 38/62 (61%), Positives = 47/62 (75%)
Frame = -3 / +3
Query: 578 TFSREYDVTLPPPNPNTTAGDNVYVLAHNTTVDVLLQNANALSRNVSEVHPWHLHGHDFW 399
++ +YD+ PPP PNTT G+ +YV N TVDV++QNAN L VSE+HPWHLHGHDFW
Sbjct: 7176939 SYRMDYDIMNPPPFPNTTTGNGIYVFPFNVTVDVIIQNANVLKGIVSEIHPWHLHGHDFW 7177118
Query: 398 VL 393
VL
Sbjct: 7177119 VL 7177124
Score = 104 bits (221), Expect(2) = 1e-052
Identities = 36/57 (63%), Positives = 42/57 (73%)
Frame = -3 / +2
Query: 563 YDVTLPPPNPNTTAGDNVYVLAHNTTVDVLLQNANALSRNVSEVHPWHLHGHDFWVL 393
YD+ PPPNPNTT G +Y A VDV+LQNAN L +SE+HPWH+HGHDFWVL
Sbjct: 7170257 YDIMKPPPNPNTTKGSGIYNFAFGIVVDVILQNANVLKGVISEIHPWHIHGHDFWVL 7170427
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 144 bits (309), Expect(2) = 5e-060
Identities = 50/74 (67%), Positives = 62/74 (83%)
Frame = -3 / -1
Query: 341 NLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDLVAKVP 162
NL++PPLRNTA+++PYGWT +RFV DNPGVW FHCHIEPHLHMGMGV+FAE ++ + KVP
Sbjct: 6870991 NLKNPPLRNTAILYPYGWTAIRFVTDNPGVWFFHCHIEPHLHMGMGVVFAEGLNRIGKVP 6870812
Query: 161 NEAVSCGAXATALM 120
+EA+ CG LM
Sbjct: 6870811 DEALGCGLTKQFLM 6870770
Score = 124 bits (266), Expect(2) = 1e-052
Identities = 42/59 (71%), Positives = 51/59 (86%)
Frame = -3 / -3
Query: 341 NLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDLVAKV 165
NL++PPLRNT V++P+GWT +RFV DNPGVW FHCHIEPHLHMGMGV+F E VD + K+
Sbjct: 6877688 NLKNPPLRNTVVLYPFGWTAIRFVTDNPGVWFFHCHIEPHLHMGMGVVFVEGVDRIGKM 6877512
Score = 109 bits (232), Expect(2) = 5e-060
Identities = 38/62 (61%), Positives = 47/62 (75%)
Frame = -3 / -1
Query: 578 TFSREYDVTLPPPNPNTTAGDNVYVLAHNTTVDVLLQNANALSRNVSEVHPWHLHGHDFW 399
++ +YD+ PPP PNTT G+ +YV N TVDV++QNAN L VSE+HPWHLHGHDFW
Sbjct: 6871225 SYRMDYDIMNPPPFPNTTTGNGIYVFPFNVTVDVIIQNANVLKGIVSEIHPWHLHGHDFW 6871046
Query: 398 VL 393
VL
Sbjct: 6871045 VL 6871040
Score = 104 bits (221), Expect(2) = 1e-052
Identities = 36/57 (63%), Positives = 42/57 (73%)
Frame = -3 / -3
Query: 563 YDVTLPPPNPNTTAGDNVYVLAHNTTVDVLLQNANALSRNVSEVHPWHLHGHDFWVL 393
YD+ PPPNPNTT G +Y A VDV+LQNAN L +SE+HPWH+HGHDFWVL
Sbjct: 6877907 YDIMKPPPNPNTTKGSGIYNFAFGIVVDVILQNANVLKGVISEIHPWHIHGHDFWVL 6877737
>gb|AC140977.1| Arabidopsis thaliana chromosome 5 BAC F13M11 genomic sequence, complete
sequence
Length = 112600
Score = 144 bits (309), Expect(2) = 5e-060
Identities = 50/74 (67%), Positives = 62/74 (83%)
Frame = -3 / -3
Query: 341 NLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDLVAKVP 162
NL++PPLRNTA+++PYGWT +RFV DNPGVW FHCHIEPHLHMGMGV+FAE ++ + KVP
Sbjct: 97766 NLKNPPLRNTAILYPYGWTAIRFVTDNPGVWFFHCHIEPHLHMGMGVVFAEGLNRIGKVP 97587
Query: 161 NEAVSCGAXATALM 120
+EA+ CG LM
Sbjct: 97586 DEALGCGLTKQFLM 97545
Score = 124 bits (266), Expect(3) = 9e-054
Identities = 42/59 (71%), Positives = 51/59 (86%)
Frame = -3 / -3
Query: 341 NLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDLVAKV 165
NL++PPLRNT V++P+GWT +RFV DNPGVW FHCHIEPHLHMGMGV+F E VD + K+
Sbjct: 104462 NLKNPPLRNTVVLYPFGWTAIRFVTDNPGVWFFHCHIEPHLHMGMGVVFVEGVDRIGKM 104286
Score = 109 bits (232), Expect(2) = 5e-060
Identities = 38/62 (61%), Positives = 47/62 (75%)
Frame = -3 / -3
Query: 578 TFSREYDVTLPPPNPNTTAGDNVYVLAHNTTVDVLLQNANALSRNVSEVHPWHLHGHDFW 399
++ +YD+ PPP PNTT G+ +YV N TVDV++QNAN L VSE+HPWHLHGHDFW
Sbjct: 98000 SYRMDYDIMNPPPFPNTTTGNGIYVFPFNVTVDVIIQNANVLKGIVSEIHPWHLHGHDFW 97821
Query: 398 VL 393
VL
Sbjct: 97820 VL 97815
Score = 104 bits (221), Expect(3) = 9e-054
Identities = 36/57 (63%), Positives = 42/57 (73%)
Frame = -3 / -3
Query: 563 YDVTLPPPNPNTTAGDNVYVLAHNTTVDVLLQNANALSRNVSEVHPWHLHGHDFWVL 393
YD+ PPPNPNTT G +Y A VDV+LQNAN L +SE+HPWH+HGHDFWVL
Sbjct: 104681 YDIMKPPPNPNTTKGSGIYNFAFGIVVDVILQNANVLKGVISEIHPWHIHGHDFWVL 104511
Score = 80.8 bits (170), Expect(2) = 7e-029
Identities = 36/62 (58%), Positives = 41/62 (66%)
Frame = +1 / +1
Query: 145 QDTASLGTLATRSTASAKMTPMPMWRCGSIWQWKAHTPGLSATNRSIVHPYGKMTAVFRS 324
Q AS GTL R SAK TP+P+ +CGS+ Q K TPGLS TN VHPYG AVFR+
Sbjct: 97570 QPNASSGTLPIRFNPSAKTTPIPICKCGSM*Q*KNQTPGLSVTNLIAVHPYGYKIAVFRN 97749
Query: 325 GG 330
GG
Sbjct: 97750 GG 97755
Score = 68.4 bits (143), Expect(2) = 7e-029
Identities = 32/55 (58%), Positives = 35/55 (63%)
Frame = +1 / +1
Query: 397 TQKSWPWRCHGCTSLTLRDSALAFWSSTSTVVLCARTYTLSPAVVLGFGGGSVTS 561
TQKS P RCHG SLT+ LAFW TSTV L +TY P VVLG GGG + S
Sbjct: 97819 TQKS*P*RCHG*ISLTIPFKTLAFWIITSTVTLNGKTYIPFPVVVLGNGGGFIIS 97983
Score = 22.1 bits (42), Expect(3) = 9e-054
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3 / -3
Query: 170 KVPNEAVSCGAXATALMAGG 111
++P+EA+ CG LM G
Sbjct: 104285 EIPDEALGCGLTRKWLMNRG 104226
>gb|AC069325.6|AC069325 Genomic Sequence For Arabidopsis thaliana Clone T10F18 From Chromosome
V, complete sequence
Length = 84413
Score = 144 bits (309), Expect(2) = 5e-060
Identities = 50/74 (67%), Positives = 62/74 (83%)
Frame = -3 / -2
Query: 341 NLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDLVAKVP 162
NL++PPLRNTA+++PYGWT +RFV DNPGVW FHCHIEPHLHMGMGV+FAE ++ + KVP
Sbjct: 32851 NLKNPPLRNTAILYPYGWTAIRFVTDNPGVWFFHCHIEPHLHMGMGVVFAEGLNRIGKVP 32672
Query: 161 NEAVSCGAXATALM 120
+EA+ CG LM
Sbjct: 32671 DEALGCGLTKQFLM 32630
Score = 124 bits (266), Expect(3) = 1e-053
Identities = 42/59 (71%), Positives = 51/59 (86%)
Frame = -3 / -1
Query: 341 NLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDLVAKV 165
NL++PPLRNT V++P+GWT +RFV DNPGVW FHCHIEPHLHMGMGV+F E VD + K+
Sbjct: 39548 NLKNPPLRNTVVLYPFGWTAIRFVTDNPGVWFFHCHIEPHLHMGMGVVFVEGVDRIGKM 39372
Score = 109 bits (232), Expect(2) = 5e-060
Identities = 38/62 (61%), Positives = 47/62 (75%)
Frame = -3 / -2
Query: 578 TFSREYDVTLPPPNPNTTAGDNVYVLAHNTTVDVLLQNANALSRNVSEVHPWHLHGHDFW 399
++ +YD+ PPP PNTT G+ +YV N TVDV++QNAN L VSE+HPWHLHGHDFW
Sbjct: 33085 SYRMDYDIMNPPPFPNTTTGNGIYVFPFNVTVDVIIQNANVLKGIVSEIHPWHLHGHDFW 32906
Query: 398 VL 393
VL
Sbjct: 32905 VL 32900
Score = 104 bits (221), Expect(3) = 1e-053
Identities = 36/57 (63%), Positives = 42/57 (73%)
Frame = -3 / -1
Query: 563 YDVTLPPPNPNTTAGDNVYVLAHNTTVDVLLQNANALSRNVSEVHPWHLHGHDFWVL 393
YD+ PPPNPNTT G +Y A VDV+LQNAN L +SE+HPWH+HGHDFWVL
Sbjct: 39767 YDIMKPPPNPNTTKGSGIYNFAFGIVVDVILQNANVLKGVISEIHPWHIHGHDFWVL 39597
Score = 80.8 bits (170), Expect(2) = 7e-029
Identities = 36/62 (58%), Positives = 41/62 (66%)
Frame = +1 / +3
Query: 145 QDTASLGTLATRSTASAKMTPMPMWRCGSIWQWKAHTPGLSATNRSIVHPYGKMTAVFRS 324
Q AS GTL R SAK TP+P+ +CGS+ Q K TPGLS TN VHPYG AVFR+
Sbjct: 32655 QPNASSGTLPIRFNPSAKTTPIPICKCGSM*Q*KNQTPGLSVTNLIAVHPYGYKIAVFRN 32834
Query: 325 GG 330
GG
Sbjct: 32835 GG 32840
Score = 68.4 bits (143), Expect(2) = 7e-029
Identities = 32/55 (58%), Positives = 35/55 (63%)
Frame = +1 / +3
Query: 397 TQKSWPWRCHGCTSLTLRDSALAFWSSTSTVVLCARTYTLSPAVVLGFGGGSVTS 561
TQKS P RCHG SLT+ LAFW TSTV L +TY P VVLG GGG + S
Sbjct: 32904 TQKS*P*RCHG*ISLTIPFKTLAFWIITSTVTLNGKTYIPFPVVVLGNGGGFIIS 33068
Score = 22.1 bits (42), Expect(3) = 1e-053
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3 / -1
Query: 170 KVPNEAVSCGAXATALMAGG 111
++P+EA+ CG LM G
Sbjct: 39371 EIPDEALGCGLTRKWLMNRG 39312
>gb|BT000672.1| Arabidopsis thaliana At5g21105 mRNA sequence
Length = 2168
Score = 144 bits (309), Expect(2) = 5e-060
Identities = 50/74 (67%), Positives = 62/74 (83%)
Frame = -3 / +2
Query: 341 NLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDLVAKVP 162
NL++PPLRNTA+++PYGWT +RFV DNPGVW FHCHIEPHLHMGMGV+FAE ++ + KVP
Sbjct: 1502 NLKNPPLRNTAILYPYGWTAIRFVTDNPGVWFFHCHIEPHLHMGMGVVFAEGLNRIGKVP 1681
Query: 161 NEAVSCGAXATALM 120
+EA+ CG LM
Sbjct: 1682 DEALGCGLTKQFLM 1723
Score = 109 bits (232), Expect(2) = 5e-060
Identities = 38/62 (61%), Positives = 47/62 (75%)
Frame = -3 / +2
Query: 578 TFSREYDVTLPPPNPNTTAGDNVYVLAHNTTVDVLLQNANALSRNVSEVHPWHLHGHDFW 399
++ +YD+ PPP PNTT G+ +YV N TVDV++QNAN L VSE+HPWHLHGHDFW
Sbjct: 1268 SYRMDYDIMNPPPFPNTTTGNGIYVFPFNVTVDVIIQNANVLKGIVSEIHPWHLHGHDFW 1447
Query: 398 VL 393
VL
Sbjct: 1448 VL 1453
Score = 80.8 bits (170), Expect(2) = 7e-029
Identities = 36/62 (58%), Positives = 41/62 (66%)
Frame = +1 / -3
Query: 145 QDTASLGTLATRSTASAKMTPMPMWRCGSIWQWKAHTPGLSATNRSIVHPYGKMTAVFRS 324
Q AS GTL R SAK TP+P+ +CGS+ Q K TPGLS TN VHPYG AVFR+
Sbjct: 1698 QPNASSGTLPIRFNPSAKTTPIPICKCGSM*Q*KNQTPGLSVTNLIAVHPYGYKIAVFRN 1519
Query: 325 GG 330
GG
Sbjct: 1518 GG 1513
Score = 68.4 bits (143), Expect(2) = 7e-029
Identities = 32/55 (58%), Positives = 35/55 (63%)
Frame = +1 / -3
Query: 397 TQKSWPWRCHGCTSLTLRDSALAFWSSTSTVVLCARTYTLSPAVVLGFGGGSVTS 561
TQKS P RCHG SLT+ LAFW TSTV L +TY P VVLG GGG + S
Sbjct: 1449 TQKS*P*RCHG*ISLTIPFKTLAFWIITSTVTLNGKTYIPFPVVVLGNGGGFIIS 1285
>gb|AY057577.1| Arabidopsis thaliana At5g21105 mRNA sequence
Length = 2148
Score = 144 bits (309), Expect(2) = 5e-060
Identities = 50/74 (67%), Positives = 62/74 (83%)
Frame = -3 / +2
Query: 341 NLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDLVAKVP 162
NL++PPLRNTA+++PYGWT +RFV DNPGVW FHCHIEPHLHMGMGV+FAE ++ + KVP
Sbjct: 1502 NLKNPPLRNTAILYPYGWTAIRFVTDNPGVWFFHCHIEPHLHMGMGVVFAEGLNRIGKVP 1681
Query: 161 NEAVSCGAXATALM 120
+EA+ CG LM
Sbjct: 1682 DEALGCGLTKQFLM 1723
Score = 109 bits (232), Expect(2) = 5e-060
Identities = 38/62 (61%), Positives = 47/62 (75%)
Frame = -3 / +2
Query: 578 TFSREYDVTLPPPNPNTTAGDNVYVLAHNTTVDVLLQNANALSRNVSEVHPWHLHGHDFW 399
++ +YD+ PPP PNTT G+ +YV N TVDV++QNAN L VSE+HPWHLHGHDFW
Sbjct: 1268 SYRMDYDIMNPPPFPNTTTGNGIYVFPFNVTVDVIIQNANVLKGIVSEIHPWHLHGHDFW 1447
Query: 398 VL 393
VL
Sbjct: 1448 VL 1453
Score = 80.8 bits (170), Expect(2) = 7e-029
Identities = 36/62 (58%), Positives = 41/62 (66%)
Frame = +1 / -1
Query: 145 QDTASLGTLATRSTASAKMTPMPMWRCGSIWQWKAHTPGLSATNRSIVHPYGKMTAVFRS 324
Q AS GTL R SAK TP+P+ +CGS+ Q K TPGLS TN VHPYG AVFR+
Sbjct: 1698 QPNASSGTLPIRFNPSAKTTPIPICKCGSM*Q*KNQTPGLSVTNLIAVHPYGYKIAVFRN 1519
Query: 325 GG 330
GG
Sbjct: 1518 GG 1513
Score = 68.4 bits (143), Expect(2) = 7e-029
Identities = 32/55 (58%), Positives = 35/55 (63%)
Frame = +1 / -1
Query: 397 TQKSWPWRCHGCTSLTLRDSALAFWSSTSTVVLCARTYTLSPAVVLGFGGGSVTS 561
TQKS P RCHG SLT+ LAFW TSTV L +TY P VVLG GGG + S
Sbjct: 1449 TQKS*P*RCHG*ISLTIPFKTLAFWIITSTVTLNGKTYIPFPVVVLGNGGGFIIS 1285
>dbj|AB004798.1| Arabidopsis thaliana mRNA for ascorbate oxidase, partial cds
Length = 2113
Score = 144 bits (309), Expect(2) = 5e-060
Identities = 50/74 (67%), Positives = 62/74 (83%)
Frame = -3 / +3
Query: 341 NLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDLVAKVP 162
NL++PPLRNTA+++PYGWT +RFV DNPGVW FHCHIEPHLHMGMGV+FAE ++ + KVP
Sbjct: 1467 NLKNPPLRNTAILYPYGWTAIRFVTDNPGVWFFHCHIEPHLHMGMGVVFAEGLNRIGKVP 1646
Query: 161 NEAVSCGAXATALM 120
+EA+ CG LM
Sbjct: 1647 DEALGCGLTKQFLM 1688
Score = 109 bits (232), Expect(2) = 5e-060
Identities = 38/62 (61%), Positives = 47/62 (75%)
Frame = -3 / +3
Query: 578 TFSREYDVTLPPPNPNTTAGDNVYVLAHNTTVDVLLQNANALSRNVSEVHPWHLHGHDFW 399
++ +YD+ PPP PNTT G+ +YV N TVDV++QNAN L VSE+HPWHLHGHDFW
Sbjct: 1233 SYRMDYDIMNPPPFPNTTTGNGIYVFPFNVTVDVIIQNANVLKGIVSEIHPWHLHGHDFW 1412
Query: 398 VL 393
VL
Sbjct: 1413 VL 1418
Score = 80.8 bits (170), Expect(2) = 7e-029
Identities = 36/62 (58%), Positives = 41/62 (66%)
Frame = +1 / -1
Query: 145 QDTASLGTLATRSTASAKMTPMPMWRCGSIWQWKAHTPGLSATNRSIVHPYGKMTAVFRS 324
Q AS GTL R SAK TP+P+ +CGS+ Q K TPGLS TN VHPYG AVFR+
Sbjct: 1663 QPNASSGTLPIRFNPSAKTTPIPICKCGSM*Q*KNQTPGLSVTNLIAVHPYGYKIAVFRN 1484
Query: 325 GG 330
GG
Sbjct: 1483 GG 1478
Score = 68.4 bits (143), Expect(2) = 7e-029
Identities = 32/55 (58%), Positives = 35/55 (63%)
Frame = +1 / -1
Query: 397 TQKSWPWRCHGCTSLTLRDSALAFWSSTSTVVLCARTYTLSPAVVLGFGGGSVTS 561
TQKS P RCHG SLT+ LAFW TSTV L +TY P VVLG GGG + S
Sbjct: 1414 TQKS*P*RCHG*ISLTIPFKTLAFWIITSTVTLNGKTYIPFPVVVLGNGGGFIIS 1250
>gb|AY050406.1| Arabidopsis thaliana AT5g21100/T10F18_130 mRNA, complete cds
Length = 2074
Score = 144 bits (309), Expect(2) = 5e-060
Identities = 50/74 (67%), Positives = 62/74 (83%)
Frame = -3 / +1
Query: 341 NLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDLVAKVP 162
NL++PPLRNTA+++PYGWT +RFV DNPGVW FHCHIEPHLHMGMGV+FAE ++ + KVP
Sbjct: 1498 NLKNPPLRNTAILYPYGWTAIRFVTDNPGVWFFHCHIEPHLHMGMGVVFAEGLNRIGKVP 1677
Query: 161 NEAVSCGAXATALM 120
+EA+ CG LM
Sbjct: 1678 DEALGCGLTKQFLM 1719
Score = 109 bits (232), Expect(2) = 5e-060
Identities = 38/62 (61%), Positives = 47/62 (75%)
Frame = -3 / +1
Query: 578 TFSREYDVTLPPPNPNTTAGDNVYVLAHNTTVDVLLQNANALSRNVSEVHPWHLHGHDFW 399
++ +YD+ PPP PNTT G+ +YV N TVDV++QNAN L VSE+HPWHLHGHDFW
Sbjct: 1264 SYRMDYDIMNPPPFPNTTTGNGIYVFPFNVTVDVIIQNANVLKGIVSEIHPWHLHGHDFW 1443
Query: 398 VL 393
VL
Sbjct: 1444 VL 1449
Score = 80.8 bits (170), Expect(2) = 7e-029
Identities = 36/62 (58%), Positives = 41/62 (66%)
Frame = +1 / -3
Query: 145 QDTASLGTLATRSTASAKMTPMPMWRCGSIWQWKAHTPGLSATNRSIVHPYGKMTAVFRS 324
Q AS GTL R SAK TP+P+ +CGS+ Q K TPGLS TN VHPYG AVFR+
Sbjct: 1694 QPNASSGTLPIRFNPSAKTTPIPICKCGSM*Q*KNQTPGLSVTNLIAVHPYGYKIAVFRN 1515
Query: 325 GG 330
GG
Sbjct: 1514 GG 1509
Score = 68.4 bits (143), Expect(2) = 7e-029
Identities = 32/55 (58%), Positives = 35/55 (63%)
Frame = +1 / -3
Query: 397 TQKSWPWRCHGCTSLTLRDSALAFWSSTSTVVLCARTYTLSPAVVLGFGGGSVTS 561
TQKS P RCHG SLT+ LAFW TSTV L +TY P VVLG GGG + S
Sbjct: 1445 TQKS*P*RCHG*ISLTIPFKTLAFWIITSTVTLNGKTYIPFPVVVLGNGGGFIIS 1281
>ref|NM_147871.1| Arabidopsis thaliana L-ascorbate oxidase/ copper ion binding
AT5G21105 mRNA, complete cds
Length = 2053
Score = 144 bits (309), Expect(2) = 5e-060
Identities = 50/74 (67%), Positives = 62/74 (83%)
Frame = -3 / +1
Query: 341 NLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDLVAKVP 162
NL++PPLRNTA+++PYGWT +RFV DNPGVW FHCHIEPHLHMGMGV+FAE ++ + KVP
Sbjct: 1477 NLKNPPLRNTAILYPYGWTAIRFVTDNPGVWFFHCHIEPHLHMGMGVVFAEGLNRIGKVP 1656
Query: 161 NEAVSCGAXATALM 120
+EA+ CG LM
Sbjct: 1657 DEALGCGLTKQFLM 1698
Score = 109 bits (232), Expect(2) = 5e-060
Identities = 38/62 (61%), Positives = 47/62 (75%)
Frame = -3 / +1
Query: 578 TFSREYDVTLPPPNPNTTAGDNVYVLAHNTTVDVLLQNANALSRNVSEVHPWHLHGHDFW 399
++ +YD+ PPP PNTT G+ +YV N TVDV++QNAN L VSE+HPWHLHGHDFW
Sbjct: 1243 SYRMDYDIMNPPPFPNTTTGNGIYVFPFNVTVDVIIQNANVLKGIVSEIHPWHLHGHDFW 1422
Query: 398 VL 393
VL
Sbjct: 1423 VL 1428
Score = 80.8 bits (170), Expect(2) = 7e-029
Identities = 36/62 (58%), Positives = 41/62 (66%)
Frame = +1 / -3
Query: 145 QDTASLGTLATRSTASAKMTPMPMWRCGSIWQWKAHTPGLSATNRSIVHPYGKMTAVFRS 324
Q AS GTL R SAK TP+P+ +CGS+ Q K TPGLS TN VHPYG AVFR+
Sbjct: 1673 QPNASSGTLPIRFNPSAKTTPIPICKCGSM*Q*KNQTPGLSVTNLIAVHPYGYKIAVFRN 1494
Query: 325 GG 330
GG
Sbjct: 1493 GG 1488
Score = 68.4 bits (143), Expect(2) = 7e-029
Identities = 32/55 (58%), Positives = 35/55 (63%)
Frame = +1 / -3
Query: 397 TQKSWPWRCHGCTSLTLRDSALAFWSSTSTVVLCARTYTLSPAVVLGFGGGSVTS 561
TQKS P RCHG SLT+ LAFW TSTV L +TY P VVLG GGG + S
Sbjct: 1424 TQKS*P*RCHG*ISLTIPFKTLAFWIITSTVTLNGKTYIPFPVVVLGNGGGFIIS 1260
>gb|BT001074.1| Arabidopsis thaliana At5g21100/T10F18_130 mRNA, complete cds
Length = 1593
Score = 144 bits (309), Expect(2) = 5e-060
Identities = 50/74 (67%), Positives = 62/74 (83%)
Frame = -3 / +1
Query: 341 NLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDLVAKVP 162
NL++PPLRNTA+++PYGWT +RFV DNPGVW FHCHIEPHLHMGMGV+FAE ++ + KVP
Sbjct: 1354 NLKNPPLRNTAILYPYGWTAIRFVTDNPGVWFFHCHIEPHLHMGMGVVFAEGLNRIGKVP 1533
Query: 161 NEAVSCGAXATALM 120
+EA+ CG LM
Sbjct: 1534 DEALGCGLTKQFLM 1575
Score = 109 bits (232), Expect(2) = 5e-060
Identities = 38/62 (61%), Positives = 47/62 (75%)
Frame = -3 / +1
Query: 578 TFSREYDVTLPPPNPNTTAGDNVYVLAHNTTVDVLLQNANALSRNVSEVHPWHLHGHDFW 399
++ +YD+ PPP PNTT G+ +YV N TVDV++QNAN L VSE+HPWHLHGHDFW
Sbjct: 1120 SYRMDYDIMNPPPFPNTTTGNGIYVFPFNVTVDVIIQNANVLKGIVSEIHPWHLHGHDFW 1299
Query: 398 VL 393
VL
Sbjct: 1300 VL 1305
Score = 80.8 bits (170), Expect(2) = 4e-029
Identities = 36/62 (58%), Positives = 41/62 (66%)
Frame = +1 / -2
Query: 145 QDTASLGTLATRSTASAKMTPMPMWRCGSIWQWKAHTPGLSATNRSIVHPYGKMTAVFRS 324
Q AS GTL R SAK TP+P+ +CGS+ Q K TPGLS TN VHPYG AVFR+
Sbjct: 1550 QPNASSGTLPIRFNPSAKTTPIPICKCGSM*Q*KNQTPGLSVTNLIAVHPYGYKIAVFRN 1371
Query: 325 GG 330
GG
Sbjct: 1370 GG 1365
Score = 69.3 bits (145), Expect(2) = 4e-029
Identities = 32/55 (58%), Positives = 35/55 (63%)
Frame = +1 / -2
Query: 397 TQKSWPWRCHGCTSLTLRDSALAFWSSTSTVVLCARTYTLSPAVVLGFGGGSVTS 561
TQKS P RCHG SLT+ LAFW TSTV L +TY P VVLG GGG + S
Sbjct: 1301 TQKS*P*RCHGWISLTIPFKTLAFWIITSTVTLNGKTYIPFPVVVLGNGGGFIIS 1137
>gb|CB253875.1|CB253875 85-E012998-019-004-I22-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768I224Q 5-PRIME, mRNA sequence
Length = 692
Score = 144 bits (309), Expect(2) = 5e-060
Identities = 50/74 (67%), Positives = 62/74 (83%)
Frame = -3 / +1
Query: 341 NLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDLVAKVP 162
NL++PPLRNTA+++PYGWT +RFV DNPGVW FHCHIEPHLHMGMGV+FAE ++ + KVP
Sbjct: 412 NLKNPPLRNTAILYPYGWTAIRFVTDNPGVWFFHCHIEPHLHMGMGVVFAEGLNRIGKVP 591
Query: 161 NEAVSCGAXATALM 120
+EA+ CG LM
Sbjct: 592 DEALGCGLTKQFLM 633
Score = 109 bits (232), Expect(2) = 5e-060
Identities = 38/62 (61%), Positives = 47/62 (75%)
Frame = -3 / +1
Query: 578 TFSREYDVTLPPPNPNTTAGDNVYVLAHNTTVDVLLQNANALSRNVSEVHPWHLHGHDFW 399
++ +YD+ PPP PNTT G+ +YV N TVDV++QNAN L VSE+HPWHLHGHDFW
Sbjct: 178 SYRMDYDIMNPPPFPNTTTGNGIYVFPFNVTVDVIIQNANVLKGIVSEIHPWHLHGHDFW 357
Query: 398 VL 393
VL
Sbjct: 358 VL 363
Score = 80.8 bits (170), Expect(2) = 7e-029
Identities = 36/62 (58%), Positives = 41/62 (66%)
Frame = +1 / -1
Query: 145 QDTASLGTLATRSTASAKMTPMPMWRCGSIWQWKAHTPGLSATNRSIVHPYGKMTAVFRS 324
Q AS GTL R SAK TP+P+ +CGS+ Q K TPGLS TN VHPYG AVFR+
Sbjct: 608 QPNASSGTLPIRFNPSAKTTPIPICKCGSM*Q*KNQTPGLSVTNLIAVHPYGYKIAVFRN 429
Query: 325 GG 330
GG
Sbjct: 428 GG 423
Score = 68.4 bits (143), Expect(2) = 7e-029
Identities = 32/55 (58%), Positives = 35/55 (63%)
Frame = +1 / -1
Query: 397 TQKSWPWRCHGCTSLTLRDSALAFWSSTSTVVLCARTYTLSPAVVLGFGGGSVTS 561
TQKS P RCHG SLT+ LAFW TSTV L +TY P VVLG GGG + S
Sbjct: 359 TQKS*P*RCHG*ISLTIPFKTLAFWIITSTVTLNGKTYIPFPVVVLGNGGGFIIS 195
>gb|BT000738.1| Arabidopsis thaliana At5g21105 mRNA sequence
Length = 2137
Score = 143 bits (307), Expect(2) = 9e-060
Identities = 49/74 (66%), Positives = 62/74 (83%)
Frame = -3 / +2
Query: 341 NLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDLVAKVP 162
NL++PPLRNTA+++PYGWT +RFV DNPGVW FHCHIEPHLHMGMGV+FAE ++ + KVP
Sbjct: 1505 NLKNPPLRNTAILYPYGWTAIRFVTDNPGVWFFHCHIEPHLHMGMGVVFAEGLNRIGKVP 1684
Query: 161 NEAVSCGAXATALM 120
+EA+ CG +M
Sbjct: 1685 DEALGCGLTKQFIM 1726
Score = 109 bits (232), Expect(2) = 9e-060
Identities = 38/62 (61%), Positives = 47/62 (75%)
Frame = -3 / +2
Query: 578 TFSREYDVTLPPPNPNTTAGDNVYVLAHNTTVDVLLQNANALSRNVSEVHPWHLHGHDFW 399
++ +YD+ PPP PNTT G+ +YV N TVDV++QNAN L VSE+HPWHLHGHDFW
Sbjct: 1271 SYRMDYDIMNPPPFPNTTTGNGIYVFPFNVTVDVIIQNANVLKGIVSEIHPWHLHGHDFW 1450
Query: 398 VL 393
VL
Sbjct: 1451 VL 1456
Score = 80.8 bits (170), Expect(2) = 7e-029
Identities = 36/62 (58%), Positives = 41/62 (66%)
Frame = +1 / -2
Query: 145 QDTASLGTLATRSTASAKMTPMPMWRCGSIWQWKAHTPGLSATNRSIVHPYGKMTAVFRS 324
Q AS GTL R SAK TP+P+ +CGS+ Q K TPGLS TN VHPYG AVFR+
Sbjct: 1701 QPNASSGTLPIRFNPSAKTTPIPICKCGSM*Q*KNQTPGLSVTNLIAVHPYGYKIAVFRN 1522
Query: 325 GG 330
GG
Sbjct: 1521 GG 1516
Score = 68.4 bits (143), Expect(2) = 7e-029
Identities = 32/55 (58%), Positives = 35/55 (63%)
Frame = +1 / -2
Query: 397 TQKSWPWRCHGCTSLTLRDSALAFWSSTSTVVLCARTYTLSPAVVLGFGGGSVTS 561
TQKS P RCHG SLT+ LAFW TSTV L +TY P VVLG GGG + S
Sbjct: 1452 TQKS*P*RCHG*ISLTIPFKTLAFWIITSTVTLNGKTYIPFPVVVLGNGGGFIIS 1288
>emb|BX829850.1|CNS0A02W Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB40ZF08 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 2033
Score = 144 bits (309), Expect(2) = 8e-059
Identities = 50/74 (67%), Positives = 62/74 (83%)
Frame = -3 / +3
Query: 341 NLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDLVAKVP 162
NL++PPLRNTA+++PYGWT +RFV DNPGVW FHCHIEPHLHMGMGV+FAE ++ + KVP
Sbjct: 1464 NLKNPPLRNTAILYPYGWTAIRFVTDNPGVWFFHCHIEPHLHMGMGVVFAEGLNRIGKVP 1643
Query: 161 NEAVSCGAXATALM 120
+EA+ CG LM
Sbjct: 1644 DEALGCGLTKQFLM 1685
Score = 105 bits (223), Expect(2) = 8e-059
Identities = 37/62 (59%), Positives = 46/62 (74%)
Frame = -3 / +3
Query: 578 TFSREYDVTLPPPNPNTTAGDNVYVLAHNTTVDVLLQNANALSRNVSEVHPWHLHGHDFW 399
++ +YD+ PPP PNTT G+ +YV N TVDV++QNAN L VSE+HPWHL GHDFW
Sbjct: 1230 SYRMDYDIMNPPPFPNTTTGNGIYVFPFNVTVDVIIQNANVLKGIVSEIHPWHLDGHDFW 1409
Query: 398 VL 393
VL
Sbjct: 1410 VL 1415
Score = 80.8 bits (170), Expect(2) = 5e-029
Identities = 36/62 (58%), Positives = 41/62 (66%)
Frame = +1 / -2
Query: 145 QDTASLGTLATRSTASAKMTPMPMWRCGSIWQWKAHTPGLSATNRSIVHPYGKMTAVFRS 324
Q AS GTL R SAK TP+P+ +CGS+ Q K TPGLS TN VHPYG AVFR+
Sbjct: 1660 QPNASSGTLPIRFNPSAKTTPIPICKCGSM*Q*KNQTPGLSVTNLIAVHPYGYKIAVFRN 1481
Query: 325 GG 330
GG
Sbjct: 1480 GG 1475
Score = 68.9 bits (144), Expect(2) = 5e-029
Identities = 32/55 (58%), Positives = 35/55 (63%)
Frame = +1 / -2
Query: 397 TQKSWPWRCHGCTSLTLRDSALAFWSSTSTVVLCARTYTLSPAVVLGFGGGSVTS 561
TQKS P RCHG SLT+ LAFW TSTV L +TY P VVLG GGG + S
Sbjct: 1411 TQKS*PSRCHG*ISLTIPFKTLAFWIITSTVTLNGKTYIPFPVVVLGNGGGFIIS 1247
>gb|CB255020.1|CB255020 53-E018440-019-009-J14-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768J149Q 5-PRIME, mRNA sequence
Length = 677
Score = 142 bits (305), Expect(2) = 5e-056
Identities = 48/67 (71%), Positives = 60/67 (89%)
Frame = -3 / +2
Query: 341 NLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDLVAKVP 162
NL++PPLRNTA+++PYGWT +RFV DNPGVW FHCHIEPHLHMGMGV+FAE ++ + KVP
Sbjct: 413 NLKNPPLRNTAILYPYGWTAIRFVTDNPGVWFFHCHIEPHLHMGMGVVFAEGLNRIGKVP 592
Query: 161 NEAVSCG 141
+EA+ CG
Sbjct: 593 DEALGCG 613
Score = 97.7 bits (207), Expect(2) = 5e-056
Identities = 34/62 (54%), Positives = 43/62 (69%)
Frame = -3 / +2
Query: 578 TFSREYDVTLPPPNPNTTAGDNVYVLAHNTTVDVLLQNANALSRNVSEVHPWHLHGHDFW 399
++ +YD+ PPP PNTT G+ +YV N TVDV++QNAN + HPWHLHGHDFW
Sbjct: 179 SYRMDYDIMNPPPFPNTTTGNGIYVFPFNVTVDVIIQNANVFFCIATAPHPWHLHGHDFW 358
Query: 398 VL 393
VL
Sbjct: 359 VL 364
Score = 80.8 bits (170), Expect(2) = 7e-028
Identities = 36/62 (58%), Positives = 41/62 (66%)
Frame = +1 / -3
Query: 145 QDTASLGTLATRSTASAKMTPMPMWRCGSIWQWKAHTPGLSATNRSIVHPYGKMTAVFRS 324
Q AS GTL R SAK TP+P+ +CGS+ Q K TPGLS TN VHPYG AVFR+
Sbjct: 609 QPNASSGTLPIRFNPSAKTTPIPICKCGSM*Q*KNQTPGLSVTNLIAVHPYGYKIAVFRN 430
Query: 325 GG 330
GG
Sbjct: 429 GG 424
Score = 65.2 bits (136), Expect(2) = 7e-028
Identities = 29/55 (52%), Positives = 35/55 (63%)
Frame = +1 / -3
Query: 397 TQKSWPWRCHGCTSLTLRDSALAFWSSTSTVVLCARTYTLSPAVVLGFGGGSVTS 561
TQKS P RCHG ++ ++ LAFW TSTV L +TY P VVLG GGG + S
Sbjct: 360 TQKS*P*RCHG*GAVAIQKKTLAFWIITSTVTLNGKTYIPFPVVVLGNGGGFIIS 196
>ref|NM_122118.4| Arabidopsis thaliana copper ion binding AT5G21100 mRNA, complete cds
Length = 2059
Score = 124 bits (266), Expect(3) = 1e-053
Identities = 42/59 (71%), Positives = 51/59 (86%)
Frame = -3 / +3
Query: 341 NLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDLVAKV 165
NL++PPLRNT V++P+GWT +RFV DNPGVW FHCHIEPHLHMGMGV+F E VD + K+
Sbjct: 1605 NLKNPPLRNTVVLYPFGWTAIRFVTDNPGVWFFHCHIEPHLHMGMGVVFVEGVDRIGKM 1781
Score = 104 bits (221), Expect(3) = 1e-053
Identities = 36/57 (63%), Positives = 42/57 (73%)
Frame = -3 / +3
Query: 563 YDVTLPPPNPNTTAGDNVYVLAHNTTVDVLLQNANALSRNVSEVHPWHLHGHDFWVL 393
YD+ PPPNPNTT G +Y A VDV+LQNAN L +SE+HPWH+HGHDFWVL
Sbjct: 1386 YDIMKPPPNPNTTKGSGIYNFAFGIVVDVILQNANVLKGVISEIHPWHIHGHDFWVL 1556
Score = 22.1 bits (42), Expect(3) = 1e-053
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3 / +3
Query: 170 KVPNEAVSCGAXATALMAGG 111
++P+EA+ CG LM G
Sbjct: 1782 EIPDEALGCGLTRKWLMNRG 1841
>gb|AY099586.1| Arabidopsis thaliana ascorbate oxidase-like protein (At5g21100) mRNA,
complete cds
Length = 1995
Score = 124 bits (266), Expect(3) = 1e-053
Identities = 42/59 (71%), Positives = 51/59 (86%)
Frame = -3 / +1
Query: 341 NLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDLVAKV 165
NL++PPLRNT V++P+GWT +RFV DNPGVW FHCHIEPHLHMGMGV+F E VD + K+
Sbjct: 1591 NLKNPPLRNTVVLYPFGWTAIRFVTDNPGVWFFHCHIEPHLHMGMGVVFVEGVDRIGKM 1767
Score = 104 bits (221), Expect(3) = 1e-053
Identities = 36/57 (63%), Positives = 42/57 (73%)
Frame = -3 / +1
Query: 563 YDVTLPPPNPNTTAGDNVYVLAHNTTVDVLLQNANALSRNVSEVHPWHLHGHDFWVL 393
YD+ PPPNPNTT G +Y A VDV+LQNAN L +SE+HPWH+HGHDFWVL
Sbjct: 1372 YDIMKPPPNPNTTKGSGIYNFAFGIVVDVILQNANVLKGVISEIHPWHIHGHDFWVL 1542
Score = 22.1 bits (42), Expect(3) = 1e-053
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3 / +1
Query: 170 KVPNEAVSCGAXATALMAGG 111
++P+EA+ CG LM G
Sbjct: 1768 EIPDEALGCGLTRKWLMNRG 1827
>gb|BT003407.1| Arabidopsis thaliana ascorbate oxidase-like protein (At5g21100) mRNA,
complete cds
Length = 1861
Score = 124 bits (266), Expect(3) = 1e-053
Identities = 42/59 (71%), Positives = 51/59 (86%)
Frame = -3 / +1
Query: 341 NLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDLVAKV 165
NL++PPLRNT V++P+GWT +RFV DNPGVW FHCHIEPHLHMGMGV+F E VD + K+
Sbjct: 1477 NLKNPPLRNTVVLYPFGWTAIRFVTDNPGVWFFHCHIEPHLHMGMGVVFVEGVDRIGKM 1653
Score = 104 bits (221), Expect(3) = 1e-053
Identities = 36/57 (63%), Positives = 42/57 (73%)
Frame = -3 / +1
Query: 563 YDVTLPPPNPNTTAGDNVYVLAHNTTVDVLLQNANALSRNVSEVHPWHLHGHDFWVL 393
YD+ PPPNPNTT G +Y A VDV+LQNAN L +SE+HPWH+HGHDFWVL
Sbjct: 1258 YDIMKPPPNPNTTKGSGIYNFAFGIVVDVILQNANVLKGVISEIHPWHIHGHDFWVL 1428
Score = 22.1 bits (42), Expect(3) = 1e-053
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3 / +1
Query: 170 KVPNEAVSCGAXATALMAGG 111
++P+EA+ CG LM G
Sbjct: 1654 EIPDEALGCGLTRKWLMNRG 1713
>emb|AX506980.1| Sequence 1675 from Patent WO0216655
Length = 1722
Score = 124 bits (266), Expect(3) = 1e-053
Identities = 42/59 (71%), Positives = 51/59 (86%)
Frame = -3 / +1
Query: 341 NLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDLVAKV 165
NL++PPLRNT V++P+GWT +RFV DNPGVW FHCHIEPHLHMGMGV+F E VD + K+
Sbjct: 1477 NLKNPPLRNTVVLYPFGWTAIRFVTDNPGVWFFHCHIEPHLHMGMGVVFVEGVDRIGKM 1653
Score = 104 bits (221), Expect(3) = 1e-053
Identities = 36/57 (63%), Positives = 42/57 (73%)
Frame = -3 / +1
Query: 563 YDVTLPPPNPNTTAGDNVYVLAHNTTVDVLLQNANALSRNVSEVHPWHLHGHDFWVL 393
YD+ PPPNPNTT G +Y A VDV+LQNAN L +SE+HPWH+HGHDFWVL
Sbjct: 1258 YDIMKPPPNPNTTKGSGIYNFAFGIVVDVILQNANVLKGVISEIHPWHIHGHDFWVL 1428
Score = 22.1 bits (42), Expect(3) = 1e-053
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3 / +1
Query: 170 KVPNEAVSCGAXATALMAGG 111
++P+EA+ CG LM G
Sbjct: 1654 EIPDEALGCGLTRKWLMNRG 1713
>emb|AX652003.1| Sequence 892 from Patent WO03000898
Length = 1722
Score = 124 bits (266), Expect(3) = 1e-053
Identities = 42/59 (71%), Positives = 51/59 (86%)
Frame = -3 / +1
Query: 341 NLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDLVAKV 165
NL++PPLRNT V++P+GWT +RFV DNPGVW FHCHIEPHLHMGMGV+F E VD + K+
Sbjct: 1477 NLKNPPLRNTVVLYPFGWTAIRFVTDNPGVWFFHCHIEPHLHMGMGVVFVEGVDRIGKM 1653
Score = 104 bits (221), Expect(3) = 1e-053
Identities = 36/57 (63%), Positives = 42/57 (73%)
Frame = -3 / +1
Query: 563 YDVTLPPPNPNTTAGDNVYVLAHNTTVDVLLQNANALSRNVSEVHPWHLHGHDFWVL 393
YD+ PPPNPNTT G +Y A VDV+LQNAN L +SE+HPWH+HGHDFWVL
Sbjct: 1258 YDIMKPPPNPNTTKGSGIYNFAFGIVVDVILQNANVLKGVISEIHPWHIHGHDFWVL 1428
Score = 22.1 bits (42), Expect(3) = 1e-053
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3 / +1
Query: 170 KVPNEAVSCGAXATALMAGG 111
++P+EA+ CG LM G
Sbjct: 1654 EIPDEALGCGLTRKWLMNRG 1713
>emb|BX829653.1|CNS0A09E Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB27ZG08 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 2002
Score = 124 bits (266), Expect(2) = 1e-052
Identities = 42/59 (71%), Positives = 51/59 (86%)
Frame = -3 / +3
Query: 341 NLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDLVAKV 165
NL++PPLRNT V++P+GWT +RFV DNPGVW FHCHIEPHLHMGMGV+F E VD + K+
Sbjct: 1605 NLKNPPLRNTVVLYPFGWTAIRFVTDNPGVWFFHCHIEPHLHMGMGVVFVEGVDRIGKM 1781
Score = 104 bits (221), Expect(2) = 1e-052
Identities = 36/57 (63%), Positives = 42/57 (73%)
Frame = -3 / +3
Query: 563 YDVTLPPPNPNTTAGDNVYVLAHNTTVDVLLQNANALSRNVSEVHPWHLHGHDFWVL 393
YD+ PPPNPNTT G +Y A VDV+LQNAN L +SE+HPWH+HGHDFWVL
Sbjct: 1386 YDIMKPPPNPNTTKGSGIYNFAFGIVVDVILQNANVLKGVISEIHPWHIHGHDFWVL 1556
>gb|CB253893.1|CB253893 85-E018438-019-009-I22-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768I229Q 5-PRIME, mRNA sequence
Length = 551
Score = 109 bits (232), Expect(2) = 3e-049
Identities = 38/62 (61%), Positives = 47/62 (75%)
Frame = -3 / +2
Query: 578 TFSREYDVTLPPPNPNTTAGDNVYVLAHNTTVDVLLQNANALSRNVSEVHPWHLHGHDFW 399
++ +YD+ PPP PNTT G+ +YV N TVDV++QNAN L VSE+HPWHLHGHDFW
Sbjct: 179 SYRMDYDIMNPPPFPNTTTGNGIYVFPFNVTVDVIIQNANVLKGIVSEIHPWHLHGHDFW 358
Query: 398 VL 393
VL
Sbjct: 359 VL 364
Score = 108 bits (230), Expect(2) = 3e-049
Identities = 36/46 (78%), Positives = 42/46 (91%)
Frame = -3 / +2
Query: 341 NLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMG 204
NL++PPLRNTA+++PYGWT +RFV DNP VW FHCHIEPHLHMGMG
Sbjct: 413 NLKNPPLRNTAILYPYGWTAIRFVTDNPRVWFFHCHIEPHLHMGMG 550
Score = 68.4 bits (143), Expect(2) = 7e-022
Identities = 32/55 (58%), Positives = 35/55 (63%)
Frame = +1 / -3
Query: 397 TQKSWPWRCHGCTSLTLRDSALAFWSSTSTVVLCARTYTLSPAVVLGFGGGSVTS 561
TQKS P RCHG SLT+ LAFW TSTV L +TY P VVLG GGG + S
Sbjct: 360 TQKS*P*RCHG*ISLTIPFKTLAFWIITSTVTLNGKTYIPFPVVVLGNGGGFIIS 196
Score = 57.4 bits (119), Expect(2) = 7e-022
Identities = 24/42 (57%), Positives = 29/42 (69%)
Frame = +1 / -3
Query: 205 PMPMWRCGSIWQWKAHTPGLSATNRSIVHPYGKMTAVFRSGG 330
P+P+ +CGS+ Q K T GLS TN VHPYG AVFR+GG
Sbjct: 549 PIPICKCGSM*Q*KNQTRGLSVTNLIAVHPYGYKIAVFRNGG 424
>ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complete sequence
Length = 18585042
Score = 105 bits (225), Expect(2) = 4e-046
Identities = 36/67 (53%), Positives = 47/67 (70%)
Frame = -3 / +3
Query: 341 NLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDLVAKVP 162
N DP +NT + P+GWT LRF ADNPGVW+FHCHIE H MGMG++F +D V+ +P
Sbjct: 18480963 NRVDPIKKNTVAVQPFGWTALRFRADNPGVWSFHCHIESHFFMGMGIVFESGIDKVSSLP 18481142
Query: 161 NEAVSCG 141
+ + CG
Sbjct: 18481143 SSIMGCG 18481163
Score = 100 bits (214), Expect(2) = 4e-046
Identities = 37/60 (61%), Positives = 43/60 (71%)
Frame = -3 / +3
Query: 572 SREYDVTLPPPNPNTTAGDNVYVLAHNTTVDVLLQNANALSRNVSEVHPWHLHGHDFWVL 393
SR YD+ P N N T D +Y L N+TVDV+LQNAN ++ N SE HPWHLHGHDFWVL
Sbjct: 18480735 SRNYDIFAKPLNANATTSDGIYRLRFNSTVDVILQNANTMNANNSETHPWHLHGHDFWVL 18480914
>emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long arm
Length = 14497843
Score = 105 bits (225), Expect(2) = 4e-046
Identities = 36/67 (53%), Positives = 47/67 (70%)
Frame = -3 / +1
Query: 341 NLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDLVAKVP 162
N DP +NT + P+GWT LRF ADNPGVW+FHCHIE H MGMG++F +D V+ +P
Sbjct: 14393764 NRVDPIKKNTVAVQPFGWTALRFRADNPGVWSFHCHIESHFFMGMGIVFESGIDKVSSLP 14393943
Query: 161 NEAVSCG 141
+ + CG
Sbjct: 14393944 SSIMGCG 14393964
Score = 100 bits (214), Expect(2) = 4e-046
Identities = 37/60 (61%), Positives = 43/60 (71%)
Frame = -3 / +1
Query: 572 SREYDVTLPPPNPNTTAGDNVYVLAHNTTVDVLLQNANALSRNVSEVHPWHLHGHDFWVL 393
SR YD+ P N N T D +Y L N+TVDV+LQNAN ++ N SE HPWHLHGHDFWVL
Sbjct: 14393536 SRNYDIFAKPLNANATTSDGIYRLRFNSTVDVILQNANTMNANNSETHPWHLHGHDFWVL 14393715
>emb|AL035708.2|ATT5J17 Arabidopsis thaliana DNA chromosome 4, BAC clone T5J17 (ESSA project)
Length = 118267
Score = 105 bits (225), Expect(2) = 4e-046
Identities = 36/67 (53%), Positives = 47/67 (70%)
Frame = -3 / +3
Query: 341 NLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDLVAKVP 162
N DP +NT + P+GWT LRF ADNPGVW+FHCHIE H MGMG++F +D V+ +P
Sbjct: 18555 NRVDPIKKNTVAVQPFGWTALRFRADNPGVWSFHCHIESHFFMGMGIVFESGIDKVSSLP 18734
Query: 161 NEAVSCG 141
+ + CG
Sbjct: 18735 SSIMGCG 18755
Score = 100 bits (214), Expect(2) = 4e-046
Identities = 37/60 (61%), Positives = 43/60 (71%)
Frame = -3 / +3
Query: 572 SREYDVTLPPPNPNTTAGDNVYVLAHNTTVDVLLQNANALSRNVSEVHPWHLHGHDFWVL 393
SR YD+ P N N T D +Y L N+TVDV+LQNAN ++ N SE HPWHLHGHDFWVL
Sbjct: 18327 SRNYDIFAKPLNANATTSDGIYRLRFNSTVDVILQNANTMNANNSETHPWHLHGHDFWVL 18506
>emb|AL161596.2|ATCHRIV92 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 92
Length = 112067
Score = 105 bits (225), Expect(2) = 4e-046
Identities = 36/67 (53%), Positives = 47/67 (70%)
Frame = -3 / +2
Query: 341 NLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDLVAKVP 162
N DP +NT + P+GWT LRF ADNPGVW+FHCHIE H MGMG++F +D V+ +P
Sbjct: 7988 NRVDPIKKNTVAVQPFGWTALRFRADNPGVWSFHCHIESHFFMGMGIVFESGIDKVSSLP 8167
Query: 161 NEAVSCG 141
+ + CG
Sbjct: 8168 SSIMGCG 8188
Score = 100 bits (214), Expect(2) = 4e-046
Identities = 37/60 (61%), Positives = 43/60 (71%)
Frame = -3 / +2
Query: 572 SREYDVTLPPPNPNTTAGDNVYVLAHNTTVDVLLQNANALSRNVSEVHPWHLHGHDFWVL 393
SR YD+ P N N T D +Y L N+TVDV+LQNAN ++ N SE HPWHLHGHDFWVL
Sbjct: 7760 SRNYDIFAKPLNANATTSDGIYRLRFNSTVDVILQNANTMNANNSETHPWHLHGHDFWVL 7939
>emb|AL022605.3|ATT19P19 Arabidopsis thaliana DNA chromosome 4, BAC clone T19P19 (ESSA project)
Length = 88343
Score = 105 bits (225), Expect(2) = 4e-046
Identities = 36/67 (53%), Positives = 47/67 (70%)
Frame = -3 / +1
Query: 341 NLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDLVAKVP 162
N DP +NT + P+GWT LRF ADNPGVW+FHCHIE H MGMG++F +D V+ +P
Sbjct: 84109 NRVDPIKKNTVAVQPFGWTALRFRADNPGVWSFHCHIESHFFMGMGIVFESGIDKVSSLP 84288
Query: 161 NEAVSCG 141
+ + CG
Sbjct: 84289 SSIMGCG 84309
Score = 100 bits (214), Expect(2) = 4e-046
Identities = 37/60 (61%), Positives = 43/60 (71%)
Frame = -3 / +1
Query: 572 SREYDVTLPPPNPNTTAGDNVYVLAHNTTVDVLLQNANALSRNVSEVHPWHLHGHDFWVL 393
SR YD+ P N N T D +Y L N+TVDV+LQNAN ++ N SE HPWHLHGHDFWVL
Sbjct: 83881 SRNYDIFAKPLNANATTSDGIYRLRFNSTVDVILQNANTMNANNSETHPWHLHGHDFWVL 84060
>ref|NM_120146.3| Arabidopsis thaliana copper ion binding AT4G39830 mRNA, complete cds
Length = 2082
Score = 105 bits (225), Expect(2) = 5e-046
Identities = 36/67 (53%), Positives = 47/67 (70%)
Frame = -3 / +1
Query: 341 NLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDLVAKVP 162
N DP +NT + P+GWT LRF ADNPGVW+FHCHIE H MGMG++F +D V+ +P
Sbjct: 1708 NRVDPIKKNTVAVQPFGWTALRFRADNPGVWSFHCHIESHFFMGMGIVFESGIDKVSSLP 1887
Query: 161 NEAVSCG 141
+ + CG
Sbjct: 1888 SSIMGCG 1908
Score = 100 bits (214), Expect(2) = 5e-046
Identities = 37/60 (61%), Positives = 43/60 (71%)
Frame = -3 / +1
Query: 572 SREYDVTLPPPNPNTTAGDNVYVLAHNTTVDVLLQNANALSRNVSEVHPWHLHGHDFWVL 393
SR YD+ P N N T D +Y L N+TVDV+LQNAN ++ N SE HPWHLHGHDFWVL
Sbjct: 1480 SRNYDIFAKPLNANATTSDGIYRLRFNSTVDVILQNANTMNANNSETHPWHLHGHDFWVL 1659
>gb|BT015360.1| Arabidopsis thaliana At4g39830 gene, complete cds
Length = 1915
Score = 105 bits (225), Expect(2) = 5e-046
Identities = 36/67 (53%), Positives = 47/67 (70%)
Frame = -3 / +2
Query: 341 NLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDLVAKVP 162
N DP +NT + P+GWT LRF ADNPGVW+FHCHIE H MGMG++F +D V+ +P
Sbjct: 1697 NRVDPIKKNTVAVQPFGWTALRFRADNPGVWSFHCHIESHFFMGMGIVFESGIDKVSSLP 1876
Query: 161 NEAVSCG 141
+ + CG
Sbjct: 1877 SSIMGCG 1897
Score = 100 bits (214), Expect(2) = 5e-046
Identities = 37/60 (61%), Positives = 43/60 (71%)
Frame = -3 / +2
Query: 572 SREYDVTLPPPNPNTTAGDNVYVLAHNTTVDVLLQNANALSRNVSEVHPWHLHGHDFWVL 393
SR YD+ P N N T D +Y L N+TVDV+LQNAN ++ N SE HPWHLHGHDFWVL
Sbjct: 1469 SRNYDIFAKPLNANATTSDGIYRLRFNSTVDVILQNANTMNANNSETHPWHLHGHDFWVL 1648
>gb|BT015885.1| Arabidopsis thaliana At4g39830 gene, complete cds
Length = 1749
Score = 105 bits (225), Expect(2) = 5e-046
Identities = 36/67 (53%), Positives = 47/67 (70%)
Frame = -3 / +1
Query: 341 NLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDLVAKVP 162
N DP +NT + P+GWT LRF ADNPGVW+FHCHIE H MGMG++F +D V+ +P
Sbjct: 1534 NRVDPIKKNTVAVQPFGWTALRFRADNPGVWSFHCHIESHFFMGMGIVFESGIDKVSSLP 1713
Query: 161 NEAVSCG 141
+ + CG
Sbjct: 1714 SSIMGCG 1734
Score = 100 bits (214), Expect(2) = 5e-046
Identities = 37/60 (61%), Positives = 43/60 (71%)
Frame = -3 / +1
Query: 572 SREYDVTLPPPNPNTTAGDNVYVLAHNTTVDVLLQNANALSRNVSEVHPWHLHGHDFWVL 393
SR YD+ P N N T D +Y L N+TVDV+LQNAN ++ N SE HPWHLHGHDFWVL
Sbjct: 1306 SRNYDIFAKPLNANATTSDGIYRLRFNSTVDVILQNANTMNANNSETHPWHLHGHDFWVL 1485
>gb|AV440044.2|AV440044 AV440044 Arabidopsis thaliana above-ground organ two to six-week
old Arabidopsis thaliana cDNA clone APD35g09_f 3', mRNA
sequence
Length = 604
Score = 124 bits (266), Expect(3) = 3e-043
Identities = 42/59 (71%), Positives = 51/59 (86%)
Frame = -3 / -3
Query: 341 NLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDLVAKV 165
NL++PPLRNT V++P+GWT +RFV DNPGVW FHCHIEPHLHMGMGV+F E VD + K+
Sbjct: 455 NLKNPPLRNTVVLYPFGWTAIRFVTDNPGVWFFHCHIEPHLHMGMGVVFVEGVDRIGKM 279
Score = 68.9 bits (144), Expect(3) = 3e-043
Identities = 23/31 (74%), Positives = 27/31 (87%)
Frame = -3 / -3
Query: 485 VDVLLQNANALSRNVSEVHPWHLHGHDFWVL 393
VDV+LQNAN L +SE+HPWH+HGHDFWVL
Sbjct: 596 VDVILQNANVLKGVISEIHPWHIHGHDFWVL 504
Score = 22.1 bits (42), Expect(3) = 3e-043
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3 / -3
Query: 170 KVPNEAVSCGAXATALMAGG 111
++P+EA+ CG LM G
Sbjct: 278 EIPDEALGCGLTRKWLMNRG 219
>gb|AV532290.1|AV532290 AV532290 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB039g01F 3', mRNA sequence
Length = 567
Score = 124 bits (266), Expect(3) = 3e-043
Identities = 42/59 (71%), Positives = 51/59 (86%)
Frame = -3 / -3
Query: 341 NLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDLVAKV 165
NL++PPLRNT V++P+GWT +RFV DNPGVW FHCHIEPHLHMGMGV+F E VD + K+
Sbjct: 421 NLKNPPLRNTVVLYPFGWTAIRFVTDNPGVWFFHCHIEPHLHMGMGVVFVEGVDRIGKM 245
Score = 68.9 bits (144), Expect(3) = 3e-043
Identities = 23/31 (74%), Positives = 27/31 (87%)
Frame = -3 / -3
Query: 485 VDVLLQNANALSRNVSEVHPWHLHGHDFWVL 393
VDV+LQNAN L +SE+HPWH+HGHDFWVL
Sbjct: 562 VDVILQNANVLKGVISEIHPWHIHGHDFWVL 470
Score = 22.1 bits (42), Expect(3) = 3e-043
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3 / -3
Query: 170 KVPNEAVSCGAXATALMAGG 111
++P+EA+ CG LM G
Sbjct: 244 EIPDEALGCGLTRKWLMNRG 185
>gb|BP569184.1|BP569184 BP569184 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-65-O14 3',
mRNA sequence
Length = 454
Score = 133 bits (284), Expect(2) = 2e-039
Identities = 47/74 (63%), Positives = 59/74 (79%)
Frame = -3 / -3
Query: 341 NLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDLVAKVP 162
NL++PPL NTA+++PYGWT +RFV NPGVW FH HIEPHLHMGMGV+FAE ++ + KVP
Sbjct: 350 NLKNPPLPNTAILYPYGWTAIRFVTHNPGVWFFHFHIEPHLHMGMGVVFAEGLNRIGKVP 171
Query: 161 NEAVSCGAXATALM 120
+EA+ CG LM
Sbjct: 170 DEALGCGLTKQFLM 129
Score = 51.9 bits (107), Expect(2) = 2e-039
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = -3 / -3
Query: 443 VSEVHPWHLHGHDFWVL 393
VSE+HPWHLHGHDFWVL
Sbjct: 449 VSEIHPWHLHGHDFWVL 399
>emb|BX827889.1|CNS0A49W Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH31ZH07 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1943
Score = 88.1 bits (186), Expect(3) = 1e-037
Identities = 32/50 (64%), Positives = 37/50 (74%)
Frame = -3 / +1
Query: 542 PNPNTTAGDNVYVLAHNTTVDVLLQNANALSRNVSEVHPWHLHGHDFWVL 393
P N T D +Y L N+TVDV+LQNAN ++ N SE HPWHLHGHDFWVL
Sbjct: 1507 P*TNATTSDGIYRLRFNSTVDVILQNANTMNANNSETHPWHLHGHDFWVL 1656
Score = 56.1 bits (116), Expect(3) = 1e-037
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = -3 / +2
Query: 248 AFHCHIEPHLHMGMGVIFAEAVDLVAKVPNEAVSCG 141
+FHCHIE H MGMG++F +D V+ +P+ + CG
Sbjct: 1799 SFHCHIESHFFMGMGIVFESGIDKVSSLPSSIMGCG 1906
Score = 52.8 bits (109), Expect(3) = 1e-037
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = -3 / +1
Query: 341 NLRDPPLRNTAVIFPYGWTMLRFVADNPGVW 249
N DP +NT + P+GWT LRF ADNPGVW
Sbjct: 1705 NRVDPIKKNTVAVQPFGWTALRFRADNPGVW 1797
>gb|AV814534.1|AV814534 AV814534 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-83-F02 3',
mRNA sequence
Length = 400
Score = 144 bits (309), Expect = 2e-033
Identities = 50/74 (67%), Positives = 62/74 (83%)
Frame = -3 / -2
Query: 341 NLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDLVAKVP 162
NL++PPLRNTA+++PYGWT +RFV DNPGVW FHCHIEPHLHMGMGV+FAE ++ + KVP
Sbjct: 357 NLKNPPLRNTAILYPYGWTAIRFVTDNPGVWFFHCHIEPHLHMGMGVVFAEGLNRIGKVP 178
Query: 161 NEAVSCGAXATALM 120
+EA+ CG LM
Sbjct: 177 DEALGCGLTKQFLM 136
>emb|BX829049.1|CNS0A3G7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL64ZA10 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 1017
Score = 104 bits (221), Expect(2) = 4e-033
Identities = 36/57 (63%), Positives = 42/57 (73%)
Frame = -3 / -3
Query: 563 YDVTLPPPNPNTTAGDNVYVLAHNTTVDVLLQNANALSRNVSEVHPWHLHGHDFWVL 393
YD+ PPPNPNTT G +Y A VDV+LQNAN L +SE+HPWH+HGHDFWVL
Sbjct: 304 YDIMKPPPNPNTTKGSGIYNFAFGIVVDVILQNANVLKGVISEIHPWHIHGHDFWVL 134
Score = 59.3 bits (123), Expect(2) = 4e-033
Identities = 19/28 (67%), Positives = 25/28 (89%)
Frame = -3 / -3
Query: 341 NLRDPPLRNTAVIFPYGWTMLRFVADNP 258
NL++PPLRNT V++P+GWT +RFV DNP
Sbjct: 85 NLKNPPLRNTVVLYPFGWTAIRFVTDNP 2
>gb|BP783770.1|BP783770 BP783770 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-88-A12 3',
mRNA sequence
Length = 434
Score = 124 bits (266), Expect(3) = 6e-031
Identities = 42/59 (71%), Positives = 51/59 (86%)
Frame = -3 / -3
Query: 341 NLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDLVAKV 165
NL++PPLRNT V++P+GWT +RFV DNPGVW FHCHIEPHLHMGMGV+F E VD + K+
Sbjct: 360 NLKNPPLRNTVVLYPFGWTAIRFVTDNPGVWFFHCHIEPHLHMGMGVVFVEGVDRIGKM 184
Score = 27.2 bits (53), Expect(3) = 6e-031
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3 / -3
Query: 416 HGHDFWVL 393
HGHDFWVL
Sbjct: 432 HGHDFWVL 409
Score = 22.1 bits (42), Expect(3) = 6e-031
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3 / -3
Query: 170 KVPNEAVSCGAXATALMAGG 111
++P+EA+ CG LM G
Sbjct: 183 EIPDEALGCGLTRKWLMNRG 124
>gb|AV531619.1|AV531619 AV531619 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB027b12F 3', mRNA sequence
Length = 484
Score = 136 bits (291), Expect = 7e-031
Identities = 47/74 (63%), Positives = 60/74 (81%)
Frame = -3 / -3
Query: 341 NLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDLVAKVP 162
NL++PPLRNTA+++PYGW +RFV DNPGVW FHCHIEPHLHMGMGV+F+E ++ + KVP
Sbjct: 464 NLKNPPLRNTAILYPYGWAAIRFVMDNPGVWFFHCHIEPHLHMGMGVVFSEGLNRIGKVP 285
Query: 161 NEAVSCGAXATALM 120
+ A+ CG LM
Sbjct: 284 D*ALGCGLTKQFLM 243
>gb|BH755890.1|BH755890 SALK_052459.53.00.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_052459.53.00.x,
DNA sequence
Length = 343
Score = 90.9 bits (192), Expect(2) = 4e-028
Identities = 33/66 (50%), Positives = 42/66 (63%)
Frame = -3 / -3
Query: 341 NLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDLVAKVP 162
N DP +NT + P+GWT LRF ADNPGVW+FHCHIE H MGMG++ A D + +
Sbjct: 221 NRVDPIKKNTVAVQPFGWTALRFRADNPGVWSFHCHIESHFFMGMGIVLESARDKFSTLH 42
Query: 161 NEAVSC 144
+ C
Sbjct: 41 RFIMGC 24
Score = 55.6 bits (115), Expect(2) = 4e-028
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = -3 / -3
Query: 464 ANALSRNVSEVHPWHLHGHDFWVL 393
AN ++ N SE HPWHLHGHDFWVL
Sbjct: 341 ANTMNANNSETHPWHLHGHDFWVL 270
>gb|BP597588.1|BP597588 BP597588 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-40-C16 3',
mRNA sequence
Length = 411
Score = 127 bits (271), Expect = 4e-028
Identities = 45/71 (63%), Positives = 57/71 (80%)
Frame = -3 / -3
Query: 332 DPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDLVAKVPNEA 153
+PPLRNTA+++PYGWT +RF+ DNPGVW FH HIEPHLHMGMGV+FAE ++ + KVP+EA
Sbjct: 349 NPPLRNTAILYPYGWTAIRFLTDNPGVWFFHFHIEPHLHMGMGVVFAEGLNRIGKVPDEA 170
Query: 152 VSCGAXATALM 120
+ G LM
Sbjct: 169 LGFGLTNQFLM 137
>gb|CC798461.1|CC798461 SALK_146378.40.50.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_146378.40.50.x,
DNA sequence
Length = 405
Score = 100 bits (214), Expect(2) = 1e-027
Identities = 37/60 (61%), Positives = 43/60 (71%)
Frame = -3 / -2
Query: 572 SREYDVTLPPPNPNTTAGDNVYVLAHNTTVDVLLQNANALSRNVSEVHPWHLHGHDFWVL 393
SR YD+ P N N T D +Y L N+TVDV+LQNAN ++ N SE HPWHLHGHDFWVL
Sbjct: 365 SRNYDIFAKPLNANATTSDGIYRLRFNSTVDVILQNANTMNANNSETHPWHLHGHDFWVL 186
Score = 45.1 bits (92), Expect(2) = 1e-027
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -3 / -3
Query: 266 DNPGVWAFHCHIEPHLHMGM 207
DNPGVW+FHCH E H +GM
Sbjct: 61 DNPGVWSFHCHNESHFFVGM 2
>gb|BP589170.1|BP589170 BP589170 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-48-N21 3',
mRNA sequence
Length = 408
Score = 123 bits (263), Expect(2) = 2e-027
Identities = 41/58 (70%), Positives = 51/58 (87%)
Frame = -3 / -1
Query: 341 NLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDLVAK 168
NL++PPLRNTA+++PYGWT +RFV DNPGVW FHCHIEPHLHMGMGV+F E ++ + K
Sbjct: 357 NLKNPPLRNTAILYPYGWTAIRFVTDNPGVWFFHCHIEPHLHMGMGVVFPEGLNRIGK 184
Score = 21.7 bits (41), Expect(2) = 2e-027
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -3 / -3
Query: 167 VPNEAVSCGAXATALM 120
VP+EA+ CG LM
Sbjct: 184 VPDEALGCGLTKQFLM 137
>gb|CC793956.1|CC793956 SALK_039183.39.45.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_039183.39.45.x,
DNA sequence
Length = 407
Score = 111 bits (236), Expect = 3e-023
Identities = 39/58 (67%), Positives = 46/58 (79%)
Frame = -3 / +3
Query: 293 GWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDLVAKVPNEAVSCGAXATALM 120
GWT +RFV DNPGVW FHCHIEPHLHMGMGV+FAE ++ + KVP+EA+ CG LM
Sbjct: 3 GWTAIRFVTDNPGVWFFHCHIEPHLHMGMGVVFAEGLNRIGKVPDEALGCGLTKQFLM 176
>gb|AV808705.1|AV808705 AV808705 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-56-A12 3',
mRNA sequence
Length = 415
Score = 84.5 bits (178), Expect(3) = 3e-022
Identities = 29/37 (78%), Positives = 31/37 (83%)
Frame = -3 / -2
Query: 302 FPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFA 192
+PYGWT +RFV NPGVW FH HIEPHLHMGMGV FA
Sbjct: 318 YPYGWTAIRFVTHNPGVWFFHFHIEPHLHMGMGVFFA 208
Score = 32.2 bits (64), Expect(3) = 3e-022
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3 / -1
Query: 212 GMGVIFAEAVDLVAKVPNEAVSCG 141
G G +F E ++ + KVP+EA+ CG
Sbjct: 229 GNGCVFREGLNPIFKVPDEALGCG 158
Score = 27.6 bits (54), Expect(3) = 3e-022
Identities = 9/12 (75%), Positives = 12/12 (100%)
Frame = -3 / -3
Query: 341 NLRDPPLRNTAV 306
NL++PPLRNTA+
Sbjct: 356 NLKNPPLRNTAI 321
>gb|CW840249.1|CW840249 GT9688.Ds5.04.09.2003.jw93.376 Arabidopsis thaliana Landsberg Ds
insertion lines Arabidopsis thaliana genomic clone
GT9688, DNA sequence
Length = 376
Score = 104 bits (221), Expect = 3e-021
Identities = 36/57 (63%), Positives = 42/57 (73%)
Frame = -3 / +2
Query: 563 YDVTLPPPNPNTTAGDNVYVLAHNTTVDVLLQNANALSRNVSEVHPWHLHGHDFWVL 393
YD+ PPPNPNTT G +Y A VDV+LQNAN L +SE+HPWH+HGHDFWVL
Sbjct: 176 YDIMKPPPNPNTTKGSGIYNFAFGIVVDVILQNANVLKGVISEIHPWHIHGHDFWVL 346
>gb|AI996008.1|AI996008 701549640 A. thaliana, Columbia Col-0, inflorescence-2 Arabidopsis
thaliana cDNA clone 701549640, mRNA sequence
Length = 275
Score = 103 bits (219), Expect = 6e-021
Identities = 37/56 (66%), Positives = 44/56 (78%)
Frame = -3 / -2
Query: 287 TMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDLVAKVPNEAVSCGAXATALM 120
T +RFV DNPGVW FHCHIEPHLHMGMGV+FAE ++ + KVP+EA+ CG LM
Sbjct: 274 TAIRFVTDNPGVWFFHCHIEPHLHMGMGVVFAEGLNRIGKVPDEALGCGLTKQFLM 107
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 828,411,792
Number of Sequences: 1013581
Number of extensions: 9165156
Number of successful extensions: 124232
Number of sequences better than 1.0e-020: 50
length of database: 302,980,290
effective HSP length: 55
effective length of database: 247,233,335
effective search space used: 36837766915
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)